Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003508

Physical Location & Seq

Genomic Coordinates Forward (+)

82558173 .. 82562633

Gene Structure 4461 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022319

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGCGGAGGAGACGAAGACCACCGTTGACTACCGGATGGAGAGAGCGTCTGGGCCCCACTTCTCGGGCCTCCGACTCGACGGCCTCTTTTCTTCTTCGCCTAATTCTTCTCCTTCTTCAGCTTCGCCACTTTCTCTTCGCTCTTCTGCCGCCGATTCTTCAAACCTCGCCGACTCCATCGCCGCCAAGCAGCCCTTCGTCATCGGTGTTTCTGGAGGTACGGCTTCCGGTAAGACCACGGTGTGCGACATGATCATCCAGCAGCTTCACGATCATCGTGTCGTCCTTGTCAATCAGGATTCATTTTATCGTGGTTTGACACCTGAGGAGTCTGAACGGGTGCATGAGTATAATTTTGATCATCCTGACGCGTTTGACACTGAGCAGATGTTAGAGTGTGTTCAAAAGCTAAAAAGCGGGCAGTCTGTCCAAGTTCCAATATATGATTTTAAGATACATCGGCGCAGTTCTGATAGTTTTCGACAGGTGAATGCTTCTGATGTAATAATCTTGGAGGGAATTCTGGTTTTCCATGACCAGCGTGTCCGTAATCTGATGAACATGAAGATTTTTGTCGATACAGATGCTGATGTGAGACTTGCTCGTAGATTAAGACGAGACACTGTTGAGAGGGGCAGGGACATAGACTCTGTTCTTGAGCAGTATGCCAAGTTTGTCAAGCCTGCTTTTGATGATTTTGTTCTCCCCTCAAAGAAGTACGCTGATGTGATCATTCCCCGGGGAGGCGATAACCATGTTGCTATTGACTTAATTGTACAACATATTCGCACGAAGCTTGGTCAGCATGACCTTTGCGAAATGTATCCTAATGTGTACGTTATACAGTCCACGTTTCAGATTAGAGGCATGCATACGCTGATTCGAGACCGAGAAATATCAAAGCATGATTTTGTATTTTATTCAGATCGCCTAATTCGTCTGGTAATTTTTGTTTCCCGCCTTACTGAAGTTTCATTTATACCATACTTATATTTCTGTCCGGTCTTTCATGGGATCTTTTTCTGCATGTTCTTAAATTTGGTCTTTTTTTGTATTTCAGGATCTGTGTATACTGGGGTTGATTTCTGCAAGAAATTATGTGGAGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCATTACGTGCATGTTGCAAAGGAATAAAAATTGGGAAGATCTTGATTCATCGTGATGGAGATGATGGCAAACAGCTTATTTATGAGAAGCTCCCGAAGGATATTTCAGAGCGTCATGTCCTGCTGCTAGACCCTGTACTTGCTACAGGTAATTCTGCTAACCAGGCTATTGAACTACTCATACAGAAGGGGGTTCCTGAATCGCATATAATATTCTTAAACCTTATATCTGCTCCTGAGGGAATTCATTGTGTTTACAAACGATTTCCATCCTTGAAGATCGTCACTTCAGAGATTGATGTCGCCCTCAATGAAGAATTTCGTGTCATACCAGGGTTGGGTGAATTTGGGGATCGTTACTTCGGCACAGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

506

Amino Acids

57.0

Weight (kDa)

6.2

Isoelectric Point (pI)

42.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	67 - 253	4.9e-51	Phosphoribulokinase / Uridine kinase family
UPRTase	PF14681	354 - 503	5.8e-56	Uracil phosphoribosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27190 AT5G40870
fragaria_vesca	FvH4_6g53220
malus_domestica	MD09G1012900.v1.1 MD17G1013500.v1.1
prunus_persica	Prupe.3G304300_v2.0.a1
pyrus_communis	pycom111g01070 pycom17g01080
rosa_chinensis	RchiOBHm_Chr2g0143031 RchiOBHm_Chr2g0143071 RchiOBHm_Chr2g0175311
rosa_laevigata	RLG00000020006 RLG00000022319
rosa_multiflora	Rmu_sc0003512.1_g000003
rosa_roxburghii	Rroxscaffold_2G00077440 Rroxscaffold_2G00102120 Rroxscaffold_2G00102150
rosa_rugosa	Rorug02G0377700 Rorug02G0582700
rosa_samantha	Rh2AG401300 Rh2AG430800 Rh2AG663000 Rh2AG663400 Rh2BG197300 Rh2BG439700 Rh2BG674200 Rh2BG674300 Rh2CG387500 Rh2CG416500 Rh2CG637300 Rh2DG450000 Rh5AG496000
rosa_wichuraiana	Rw2G035190 Rw2G035210 Rw2G054360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	542
AccI	GTMKAC	1 cut(s)	1070
AccII	CGCG	1 cut(s)	371
AciI	CCGC	5 cut(s)	5, 150, 183, 417, 958
AclWI	GGATC	3 cut(s)	1022, 1069, 1500
AcsI	RAATTY	5 cut(s)	519, 1036, 1383, 1457, 1484
AcuI	CTGAAG	3 cut(s)	102, 987, 1413
AdeI	CACNNNGTG	1 cut(s)	243
AfaI	GTAC	5 cut(s)	220, 719, 777, 836, 1278
AfiI	CCNNNNNNNGG	3 cut(s)	64, 743, 1478
AflIII	ACRYGT	1 cut(s)	369
AgsI	TTSAA	5 cut(s)	162, 404, 1110, 1313, 1417
AjnI	CCWGG	2 cut(s)	1302, 1471
AjuI	GAANNNNNNNTTGG	2 cut(s)	179, 211
AluBI	AGCT	6 cut(s)	122, 265, 409, 796, 1216, 1231
AluI	AGCT	6 cut(s)	122, 265, 409, 796, 1216, 1231
Alw26I	GTCTC	4 cut(s)	5, 589, 612, 879
AlwI	GGATC	3 cut(s)	1022, 1069, 1500
AlwNI	CAGNNNCTG	2 cut(s)	587, 1064
Ama87I	CYCGRG	2 cut(s)	64, 738
AoxI	GGCC	3 cut(s)	53, 67, 82
ApaI	GGGCCC	1 cut(s)	57
ApeKI	GCWGC	3 cut(s)	190, 262, 1264
ApoI	RAATTY	5 cut(s)	519, 1036, 1383, 1457, 1484
Asp700I	GAANNNNTTC	1 cut(s)	1458
AspLEI	GCGC	1 cut(s)	465
AspS9I	GGNCC	3 cut(s)	53, 54, 67
AsuC2I	CCSGG	2 cut(s)	739, 740
AsuHPI	GGTGA	3 cut(s)	499, 1136, 1493
AsuII	TTCGAA	1 cut(s)	1117
AvaI	CYCGRG	2 cut(s)	64, 738
AxyI	CCTNAGG	2 cut(s)	324, 1377
BaeGI	GKGCMC	1 cut(s)	57
BanII	GRGCYC	1 cut(s)	57
BbsI	GAAGAC	1 cut(s)	23
BbvI	GCAGC	3 cut(s)	202, 274, 1251
BccI	CCATC	5 cut(s)	31, 185, 1190, 1199, 1417
BceAI	ACGGC	2 cut(s)	97, 237
BcgI	CGANNNNNNTGC	2 cut(s)	566, 600
BciT130I	CCWGG	2 cut(s)	1304, 1473
BciVI	GTATCC	1 cut(s)	834
BclI	TGATCA	3 cut(s)	252, 358, 729
BcnI	CCSGG	2 cut(s)	739, 740
BcoDI	GTCTC	4 cut(s)	5, 589, 612, 879
BfaI	CTAG	1 cut(s)	1268
BfmI	CTRYAG	1 cut(s)	1284
BfuI	GTATCC	1 cut(s)	834
BglII	AGATCT	1 cut(s)	1179
BisI	GCNGC	5 cut(s)	150, 183, 191, 263, 1265
BlsI	GCNGC	5 cut(s)	151, 184, 192, 264, 1266
Bme1390I	CCNGG	4 cut(s)	739, 740, 1304, 1473
BmeT110I	CYCGRG	2 cut(s)	64, 738
BmgT120I	GGNCC	3 cut(s)	53, 54, 67
BmiI	GGNNCC	3 cut(s)	55, 56, 1335
BmrFI	CCNGG	4 cut(s)	739, 740, 1304, 1473
BmrI	ACTGGG	1 cut(s)	1083
BmsI	GCATC	1 cut(s)	574
BmuI	ACTGGG	1 cut(s)	1083
BpiI	GAAGAC	1 cut(s)	23
BplI	GAGNNNNNCTC	2 cut(s)	586, 618
BpmI	CTGGAG	1 cut(s)	234
Bpu14I	TTCGAA	1 cut(s)	1117
BpuEI	CTTGAG	1 cut(s)	677
BpuMI	CCSGG	2 cut(s)	739, 740
BsaAI	YACGTR	1 cut(s)	1148
BsaBI	GATNNNNATC	1 cut(s)	1408
BsaI	GGTCTC	1 cut(s)	879
BsaJI	CCNNGG	5 cut(s)	237, 737, 738, 739, 1472
BsaWI	WCCGGW	3 cut(s)	33, 227, 1000
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	3 cut(s)	64, 743, 1478
Bse1I	ACTGG	1 cut(s)	1078
Bse21I	CCTNAGG	2 cut(s)	324, 1377
Bse8I	GATNNNNATC	1 cut(s)	1408
BseBI	CCWGG	2 cut(s)	1304, 1473
BseDI	CCNNGG	5 cut(s)	237, 737, 738, 739, 1472
BseGI	GGATG	4 cut(s)	42, 255, 361, 1409
BseJI	GATNNNNATC	1 cut(s)	1408
BseLI	CCNNNNNNNGG	3 cut(s)	64, 743, 1478
BseMII	CTCAG	3 cut(s)	315, 372, 1368
BseNI	ACTGG	1 cut(s)	1078
BseRI	GAGGAG	2 cut(s)	23, 341
BseSI	GKGCMC	1 cut(s)	57
BseXI	GCAGC	3 cut(s)	202, 274, 1251
Bsh1236I	CGCG	1 cut(s)	371
BshFI	GGCC	3 cut(s)	55, 69, 84
BsiHKCI	CYCGRG	2 cut(s)	64, 738
BsiSI	CCGG	4 cut(s)	34, 228, 739, 1001
BslFI	GGGAC	1 cut(s)	653
BslI	CCNNNNNNNGG	3 cut(s)	64, 743, 1478
BsmAI	GTCTC	4 cut(s)	5, 589, 612, 879
BsmBI	CGTCTC	1 cut(s)	5
BsmFI	GGGAC	1 cut(s)	653
BsmI	GAATGC	1 cut(s)	496
BsnI	GGCC	3 cut(s)	55, 69, 84
Bso31I	GGTCTC	1 cut(s)	879
BsoBI	CYCGRG	2 cut(s)	64, 738
Bsp119I	TTCGAA	1 cut(s)	1117
Bsp120I	GGGCCC	1 cut(s)	53
Bsp1286I	GDGCHC	1 cut(s)	57
Bsp1407I	TGTACA	1 cut(s)	775
BspACI	CCGC	5 cut(s)	5, 150, 183, 417, 958
BspANI	GGCC	3 cut(s)	55, 69, 84
BspCNI	CTCAG	3 cut(s)	316, 373, 1369
BspFNI	CGCG	1 cut(s)	371
BspLI	GGNNCC	3 cut(s)	55, 56, 1335
BspPI	GGATC	3 cut(s)	1022, 1069, 1500
BspQI	GCTCTTC	1 cut(s)	148
BspT104I	TTCGAA	1 cut(s)	1117
BspTNI	GGTCTC	1 cut(s)	879
BsrGI	TGTACA	1 cut(s)	775
BsrI	ACTGG	1 cut(s)	1078
BssECI	CCNNGG	5 cut(s)	237, 737, 738, 739, 1472
BssNAI	GTATAC	1 cut(s)	1071
Bst1107I	GTATAC	1 cut(s)	1071
Bst2UI	CCWGG	2 cut(s)	1304, 1473
Bst4CI	ACNGT	4 cut(s)	25, 241, 625, 846
Bst6I	CTCTTC	2 cut(s)	141, 148
BstAPI	GCANNNNNTGC	1 cut(s)	1148
BstAUI	TGTACA	1 cut(s)	775
BstBAI	YACGTR	1 cut(s)	1148
BstBI	TTCGAA	1 cut(s)	1117
BstC8I	GCNNGC	3 cut(s)	419, 684, 869
BstDEI	CTNAG	3 cut(s)	324, 381, 1377
BstDSI	CCRYGG	1 cut(s)	237
BstF5I	GGATG	4 cut(s)	42, 255, 361, 1409
BstFNI	CGCG	1 cut(s)	371
BstHHI	GCGC	1 cut(s)	465
BstMAI	GTCTC	4 cut(s)	5, 589, 612, 879
BstMWI	GCNNNNNNNGC	3 cut(s)	802, 1148, 1304
BstNI	CCWGG	2 cut(s)	1304, 1473
BstNSI	RCATGY	3 cut(s)	871, 1030, 1155
BstSCI	CCNGG	4 cut(s)	737, 738, 1302, 1471
BstSFI	CTRYAG	1 cut(s)	1284
BstSLI	GKGCMC	1 cut(s)	57
BstUI	CGCG	1 cut(s)	371
BstV1I	GCAGC	3 cut(s)	202, 274, 1251
BstV2I	GAAGAC	1 cut(s)	23
BstX2I	RGATCY	3 cut(s)	1014, 1061, 1179
BstYI	RGATCY	3 cut(s)	1014, 1061, 1179
BstZ17I	GTATAC	1 cut(s)	1071
Bsu36I	CCTNAGG	2 cut(s)	324, 1377
BsuI	GTATCC	1 cut(s)	834
BsuRI	GGCC	3 cut(s)	55, 69, 84
BtgI	CCRYGG	1 cut(s)	237
BtgZI	GCGATG	1 cut(s)	163
BtsCI	GGATG	4 cut(s)	42, 255, 361, 1409
BtsIMutI	CAGTG	2 cut(s)	378, 621
Cac8I	GCNNGC	3 cut(s)	419, 684, 869
CaiI	CAGNNNCTG	2 cut(s)	587, 1064
CfoI	GCGC	1 cut(s)	465
Cfr13I	GGNCC	3 cut(s)	53, 54, 67
Cfr9I	CCCGGG	1 cut(s)	738
CseI	GACGC	3 cut(s)	36, 377, 1241
Csp6I	GTAC	5 cut(s)	219, 718, 776, 835, 1277
CviQI	GTAC	5 cut(s)	219, 718, 776, 835, 1277
DdeI	CTNAG	3 cut(s)	324, 381, 1377
DraIII	CACNNNGTG	1 cut(s)	243
DrdI	GACNNNNNNGTC	1 cut(s)	542
DseDI	GACNNNNNNGTC	1 cut(s)	542
Eam1104I	CTCTTC	2 cut(s)	141, 148
EarI	CTCTTC	2 cut(s)	141, 148
EciI	GGCGGA	1 cut(s)	20
Eco24I	GRGCYC	1 cut(s)	57
Eco31I	GGTCTC	1 cut(s)	879
Eco57I	CTGAAG	3 cut(s)	102, 987, 1413
Eco81I	CCTNAGG	2 cut(s)	324, 1377
Eco88I	CYCGRG	2 cut(s)	64, 738
EcoO109I	RGGNCCY	1 cut(s)	54
EcoRI	GAATTC	2 cut(s)	519, 1383
EcoRII	CCWGG	2 cut(s)	1302, 1471
EcoT22I	ATGCAT	2 cut(s)	873, 1144
EcoT38I	GRGCYC	1 cut(s)	57
Esp3I	CGTCTC	1 cut(s)	5
FalI	AAGNNNNNCTT	2 cut(s)	179, 211
FaqI	GGGAC	1 cut(s)	653
FauI	CCCGC	2 cut(s)	410, 965
FbaI	TGATCA	3 cut(s)	252, 358, 729
FblI	GTMKAC	1 cut(s)	1070
Fnu4HI	GCNGC	5 cut(s)	150, 183, 191, 263, 1265
FokI	GGATG	4 cut(s)	49, 242, 348, 1396
FriOI	GRGCYC	1 cut(s)	57
Fsp4HI	GCNGC	5 cut(s)	150, 183, 191, 263, 1265
FspBI	CTAG	1 cut(s)	1268
GlaI	GCGC	1 cut(s)	464
GluI	GCNGC	5 cut(s)	150, 183, 191, 263, 1265
GsuI	CTGGAG	1 cut(s)	234
HaeIII	GGCC	3 cut(s)	55, 69, 84
HapII	CCGG	4 cut(s)	34, 228, 739, 1001
HgaI	GACGC	3 cut(s)	36, 377, 1241
HhaI	GCGC	1 cut(s)	465
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HincII	GTYRAC	1 cut(s)	28
HindII	GTYRAC	1 cut(s)	28
HindIII	AAGCTT	1 cut(s)	794
HinfI	GANTC	9 cut(s)	75, 155, 173, 299, 329, 647, 880, 1186, 1340
HpaII	CCGG	4 cut(s)	34, 228, 739, 1001
HphI	GGTGA	3 cut(s)	499, 1136, 1493
Hpy166II	GTNNAC	5 cut(s)	28, 835, 849, 1071, 1396
Hpy188I	TCNGA	9 cut(s)	74, 334, 472, 499, 555, 858, 925, 1249, 1432
Hpy8I	GTNNAC	5 cut(s)	28, 835, 849, 1071, 1396
Hpy99I	CGWCG	1 cut(s)	83
HpyAV	CCTTC	4 cut(s)	123, 205, 1231, 1321
HpyCH4III	ACNGT	4 cut(s)	25, 241, 625, 846
HpyCH4IV	ACGT	3 cut(s)	837, 851, 1147
HpyCH4V	TGCA	7 cut(s)	343, 871, 1026, 1089, 1142, 1151, 1158
HpyF10VI	GCNNNNNNNGC	3 cut(s)	802, 1148, 1304
HpyF3I	CTNAG	3 cut(s)	324, 381, 1377
HpySE526I	ACGT	3 cut(s)	837, 851, 1147
HspAI	GCGC	1 cut(s)	463
Ksp22I	TGATCA	3 cut(s)	252, 358, 729
LguI	GCTCTTC	1 cut(s)	148
LmnI	GCTCC	2 cut(s)	1236, 1378
Lsp1109I	GCAGC	3 cut(s)	202, 274, 1251
LweI	GCATC	1 cut(s)	574
MaeI	CTAG	1 cut(s)	1268
MaeII	ACGT	3 cut(s)	837, 851, 1147
MaeIII	GTNAC	2 cut(s)	1423, 1496
MfeI	CAATTG	1 cut(s)	1110
MflI	RGATCY	3 cut(s)	1014, 1061, 1179
MhlI	GDGCHC	1 cut(s)	57
MluI	ACGCGT	1 cut(s)	369
MlyI	GAGTC	4 cut(s)	69, 167, 338, 641
MmeI	TCCRAC	1 cut(s)	97
Mph1103I	ATGCAT	2 cut(s)	873, 1144
MroXI	GAANNNNTTC	1 cut(s)	1458
MseI	TTAA	5 cut(s)	450, 611, 770, 1034, 1358
MslI	CAYNNNNRTG	1 cut(s)	1194
MspI	CCGG	4 cut(s)	34, 228, 739, 1001
MspR9I	CCNGG	4 cut(s)	739, 740, 1304, 1473
MunI	CAATTG	1 cut(s)	1110
Mva1269I	GAATGC	1 cut(s)	496
MvaI	CCWGG	2 cut(s)	1304, 1473
MvnI	CGCG	1 cut(s)	371
MwoI	GCNNNNNNNGC	3 cut(s)	802, 1148, 1304
NciI	CCSGG	2 cut(s)	739, 740
NlaIV	GGNNCC	3 cut(s)	55, 56, 1335
NmuCI	GTSAC	1 cut(s)	1423
NsiI	ATGCAT	2 cut(s)	873, 1144
NspI	RCATGY	3 cut(s)	871, 1030, 1155
NspV	TTCGAA	1 cut(s)	1117
PaeI	GCATGC	1 cut(s)	871
PciSI	GCTCTTC	1 cut(s)	148
PcsI	WCGNNNNNNNCGW	1 cut(s)	934
PctI	GAATGC	1 cut(s)	496
PdmI	GAANNNNTTC	1 cut(s)	1458
PfeI	GAWTC	5 cut(s)	155, 299, 880, 1186, 1340
PkrI	GCNGC	5 cut(s)	151, 184, 192, 264, 1266
PleI	GAGTC	4 cut(s)	69, 167, 337, 641
PpsI	GAGTC	4 cut(s)	69, 167, 337, 641
Ppu21I	YACGTR	1 cut(s)	1148
Psp6I	CCWGG	2 cut(s)	1302, 1471
PspGI	CCWGG	2 cut(s)	1302, 1471
PspN4I	GGNNCC	3 cut(s)	55, 56, 1335
PspOMI	GGGCCC	1 cut(s)	53
PspPI	GGNCC	3 cut(s)	53, 54, 67
PsrI	GAACNNNNNNTAC	2 cut(s)	1305, 1337
PstNI	CAGNNNCTG	2 cut(s)	587, 1064
PsuI	RGATCY	3 cut(s)	1014, 1061, 1179
RsaI	GTAC	5 cut(s)	220, 719, 777, 836, 1278
RsaNI	GTAC	5 cut(s)	219, 718, 776, 835, 1277
RseI	CAYNNNNRTG	1 cut(s)	1194
SapI	GCTCTTC	1 cut(s)	148
SaqAI	TTAA	5 cut(s)	450, 611, 770, 1034, 1358
SatI	GCNGC	5 cut(s)	150, 183, 191, 263, 1265
Sau96I	GGNCC	3 cut(s)	53, 54, 67
SchI	GAGTC	4 cut(s)	69, 167, 338, 641
ScrFI	CCNGG	4 cut(s)	739, 740, 1304, 1473
SduI	GDGCHC	1 cut(s)	57
SfaNI	GCATC	1 cut(s)	574
SfcI	CTRYAG	1 cut(s)	1284
SfuI	TTCGAA	1 cut(s)	1117
SmaI	CCCGGG	1 cut(s)	740
SmiMI	CAYNNNNRTG	1 cut(s)	1194
SmlI	CTYRAG	1 cut(s)	656
SmoI	CTYRAG	1 cut(s)	656
SphI	GCATGC	1 cut(s)	871
SsiI	CCGC	5 cut(s)	5, 150, 183, 417, 958
SspI	AATATT	1 cut(s)	1353
SspMI	CTAG	1 cut(s)	1268
StyD4I	CCNGG	4 cut(s)	737, 738, 1302, 1471
TaaI	ACNGT	4 cut(s)	25, 241, 625, 846
TaiI	ACGT	3 cut(s)	840, 854, 1150
TaqI	TCGA	5 cut(s)	78, 481, 576, 883, 1117
TaqII	GACCGA	1 cut(s)	903
TatI	WGTACW	2 cut(s)	775, 1276
TauI	GCSGC	2 cut(s)	152, 185
TfiI	GAWTC	5 cut(s)	155, 299, 880, 1186, 1340
Tru1I	TTAA	5 cut(s)	450, 611, 770, 1034, 1358
Tru9I	TTAA	5 cut(s)	450, 611, 770, 1034, 1358
TscAI	CASTG	2 cut(s)	385, 628
TseFI	GTSAC	1 cut(s)	1423
TseI	GCWGC	3 cut(s)	190, 262, 1264
Tsp45I	GTSAC	1 cut(s)	1423
TspDTI	ATGAA	8 cut(s)	291, 572, 578, 963, 998, 1178, 1376, 1467
TspGWI	ACGGA	1 cut(s)	536
TspMI	CCCGGG	1 cut(s)	738
TspRI	CASTG	2 cut(s)	385, 628
XapI	RAATTY	5 cut(s)	519, 1036, 1383, 1457, 1484
XceI	RCATGY	3 cut(s)	871, 1030, 1155
XmaI	CCCGGG	1 cut(s)	738
XmiI	GTMKAC	1 cut(s)	1070
XmnI	GAANNNNTTC	1 cut(s)	1458
XspI	CTAG	1 cut(s)	1268
Zsp2I	ATGCAT	2 cut(s)	873, 1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.