Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002471

Physical Location & Seq

Genomic Coordinates Reverse (-)

22298453 .. 22301859

Gene Structure 3407 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G54910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGTAAAAATTAAGAAGACTAAGGGAATGAGGAAGCAGATTCGTCTCAACGAAGTCGAAGAAATAAATCTTCTGAAGCAGTGGATCGAATCACAGAAACCGGATTCAGGATTCAATCCACTTTCATTGCGTCCTCTTCCTAAAGATTCGAAGATCGGAAAGTCCGAAGACGGCAAAAACGGCACCGTTTTCTCTCGGTATGCAGGTGTGAGGAAGTTTGCTCAGTTACCTATATCGGATAAAACGAAAAGAGGATTGAAAGATGCGAAATACGTTGATATGACTGATGTTCAGAGTGCTGCTATTCCTCATGCTTTATGTGGAAGAGATATTCTTGGTGCTGCTAGAACTGGGTCTGGCAAAACTCTGGCTTTTGTTATTCCGATTCTGGAGAAGTTACATAGGGAGAGATGGAGTCCTGAAGATGGTGTGGGATGTATAATTATATCTCCAACAAGGGAATTGGCAGCCCAGACATTCGGTGTTTTGAATAAAGTAGGAAAGTTTCATAAGTTTAGTGCGGGGCTCTTAATTGGTGGTCGTGAAGGAGTTGATGTTGAGAAGGAGAGAGTTCATGAGATGAATATTTTGGTGTGTGCTCCTGGTAGGCTTCTTCAGCACATGGATGAGACTCCAAACTTCGAATGTCCACAGCTTCAGATTCTGATTTTAGATGAGGCCGACCGTGTCCTTGATTCTGCGTTCAAGGGGCAGTTGGATCCTATAATCTCACAGTTGCCTAAGCACAGACAAACTTTGCTTTTCTCTGCAACTCAAACTAAGAAAGTCAAGGATCTAGCAAGACTCAGTTTGAGAGATCCTGAGTACATTAGTGTACATGCAGAGGCGGTTACAGCTACTCCAACTTCCTTGATGCAGACTGTGATGATTGTCCCAGTTGAAAAGAAATTAGACATGTTATGGAGTTTCATCAAAACTCACCTTAATTCCAGGATTCTTGTTTTCCTCTCCACCAAGAAACAGGTCAAATTTGTGCATGAAGCATTCAACAAGCTCCGGCCTGGAATACCTTTGAAGAGTCTTCATGGAAAAATGAGTCAGGAAAAAAGGATGGGAGTGTACTCTCAGTTCATTGAGAGACAATCAGTTCTGTTCTGTACTGATGTTCTTGCTAGAGGTCTTGATTTTGATAAGGCTGTGGACTGGGTTGTTCAGGTGGATTGTCCTGAAGATGTAGCTTCTTATATTCACCGGGTTGGGCGTACAGCTCGTTTCTATACTCAAGGGAAGTCGCTCCTCTTTCTGACACCTTCAGAGGAAAAAATGATTGAGAAATTACAAGAAGCTAAAGTGCCTATAAAACTCATCAAGGCAAACAACCAAAAGTTGCAGGAGGTTTCTAGGCTCTTGGCTGCTTTGTTAGTCAAGTATCCAGATCTTCAAGGTGTTGCTCAGAGAGCCTTCATCACATATTTGAGGTCCATCCACAAAAGAAGGGACAAAGAGATTTTTGATGTGTCAAAGCTGTCGATTGAAAACTTTTCTGCTTCACTTGGTCTGCCAATGACTCCCAGAATCCGATTCACAAACCTTAAAACGAAGAAAAAGGGGGTATATGAGAGTTCTATCGCTATGGAGATTGAGAATGCACAGGAATATGAAGCACCTCTGGTTGTCAAAAAAGATCTTCTTGGTGAAGATTTAGAAGAAGAGGATTTTGCTCTCAAGCCACGTAAAGAGGGCAAAGTAGTAGAAAAATCAACCAAGGAAGAAGAAGTTCTCATACCAGGAAATCGTGTTTTGAAAAACAAGAAGCTGAAGATCAATCTACACAGACCATTTGGGTCGAGGGTTGTGCTTGATGAGGAAGGCAATTCTTTGGCTCCCTTAGCAAGTGTAGCTGCTGAAGCAGGGACTGAAGTAGCCCTTGATGAAGAGAGAATGAATGATTACTATAAGAAAGTGGGAGCGGAAATGAGGAAAGCTGATATAGAGGACAAGAAAGTAGACAAGGAAAGGAGGAGGGAAAAGAGAATGAAACAGAAGATTAAGAGGAAGAGAGGAGCCATGGAGGATGAAGAAGAAGAAGAAGAAGAAGACCATGATGGTTCTGGATCATCAGATGATGAAACTGGAAGAAACAGCAAAAGAGCAAAGAAAATCGTCTCTGACAATGAAGAAAATGGAGGAAAAATCAATACAGATTCTCTTTCCGTAGCTGATCTTGAAGAAATGGCTCTCAAATTCATAACGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

739

Amino Acids

83.58

Weight (kDa)

9.15

Isoelectric Point (pI)

44.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	95 - 266	9.1e-43	DEAD/DEAH box helicase
Helicase_C	PF00271	303 - 412	1.8e-23	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	465 - 513	2.8e-13	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54910
fragaria_vesca	FvH4_4g36230 FvH4_4g36230 FvH4_4g36230 FvH4_5g34980
malus_domestica	MD08G1022200.v1.1 MD13G1010800.v1.1 MD15G1026900.v1.1
prunus_persica	Prupe.1G342200_v2.0.a1
pyrus_communis	pycom08g13590 pycom13g00910 pycom15g02270 pycom15g02280 pycom15g02290
rosa_chinensis	RchiOBHm_Chr1g0336991 RchiOBHm_Chr4g0445981
rosa_laevigata	RLG00000005702 RLG00000029316
rosa_multiflora	Rmu_co8191210.1_g000001 Rmu_sc0000115.1_g000004 Rmu_sc0003001.1_g000004 Rmu_sc0008543.1_g000002 Rmu_sc0009742.1_g000002 Rmu_sc0036469.1_g000003
rosa_roxburghii	Rroxscaffold_4G00315110 Rroxscaffold_5G00386390
rosa_rugosa	Rorug01G0129500 Rorug01G0130100 Rorug04G0366700 Rorug04G0366700
rosa_samantha	Rh1AG150500 Rh1BG118700 Rh1BG118900 Rh1CG141800 Rh1DG157800 Rh4AG428100 Rh4BG437700 Rh4CG454400 Rh4DG436200
rosa_wichuraiana	Rw1G012290 Rw4G036610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	194
Acc36I	ACCTGC	1 cut(s)	194
AccB1I	GGYRCC	1 cut(s)	182
AccBSI	CCGCTC	1 cut(s)	1931
AccI	GTMKAC	1 cut(s)	1968
AciI	CCGC	3 cut(s)	521, 848, 1931
AclWI	GGATC	6 cut(s)	92, 713, 726, 801, 812, 2083
AcsI	RAATTY	2 cut(s)	989, 2204
AcuI	CTGAAG	9 cut(s)	95, 441, 599, 641, 1209, 1257, 1799, 1887, 1899
AfaI	GTAC	5 cut(s)	827, 837, 1082, 1120, 1225
AfiI	CCNNNNNNNGG	2 cut(s)	107, 425
AflIII	ACRYGT	1 cut(s)	915
AjnI	CCWGG	4 cut(s)	601, 950, 1021, 1747
Alw21I	GWGCWC	1 cut(s)	601
Alw26I	GTCTC	4 cut(s)	50, 623, 1093, 2131
AlwI	GGATC	6 cut(s)	92, 713, 726, 801, 812, 2083
AlwNI	CAGNNNCTG	2 cut(s)	664, 1877
AoxI	GGCC	2 cut(s)	678, 1019
ApeKI	GCWGC	5 cut(s)	299, 341, 467, 1373, 1862
ApoI	RAATTY	2 cut(s)	989, 2204
Asp700I	GAANNNNTTC	1 cut(s)	1737
AspS9I	GGNCC	1 cut(s)	1440
AsuC2I	CCSGG	1 cut(s)	1214
AsuHPI	GGTGA	3 cut(s)	932, 1202, 1667
AsuII	TTCGAA	2 cut(s)	149, 642
AvaII	GGWCC	1 cut(s)	1440
BamHI	GGATCC	1 cut(s)	718
BanI	GGYRCC	1 cut(s)	182
BanII	GRGCYC	1 cut(s)	528
BarI	GAAGNNNNNNTAC	2 cut(s)	1728, 1760
BbsI	GAAGAC	4 cut(s)	23, 174, 1034, 2064
Bbv12I	GWGCWC	1 cut(s)	601
BbvI	GCAGC	5 cut(s)	286, 328, 479, 1360, 1849
BccI	CCATC	5 cut(s)	405, 419, 1066, 1451, 2060
BceAI	ACGGC	2 cut(s)	187, 196
BcgI	CGANNNNNNTGC	2 cut(s)	1798, 1832
BciT130I	CCWGG	4 cut(s)	603, 952, 1023, 1749
BciVI	GTATCC	1 cut(s)	1401
BcnI	CCSGG	1 cut(s)	1214
BcoDI	GTCTC	4 cut(s)	50, 623, 1093, 2131
BfaI	CTAG	4 cut(s)	345, 797, 1134, 1362
BfuAI	ACCTGC	1 cut(s)	194
BfuI	GTATCC	1 cut(s)	1401
BglII	AGATCT	2 cut(s)	1396, 1645
BisI	GCNGC	5 cut(s)	300, 342, 468, 1374, 1863
BlsI	GCNGC	5 cut(s)	301, 343, 469, 1375, 1864
Bme1390I	CCNGG	5 cut(s)	603, 952, 1023, 1214, 1749
Bme18I	GGWCC	1 cut(s)	1440
BmgT120I	GGNCC	1 cut(s)	1440
BmiI	GGNNCC	4 cut(s)	184, 720, 1845, 2026
BmrFI	CCNGG	5 cut(s)	603, 952, 1023, 1214, 1749
BmrI	ACTGGG	3 cut(s)	360, 890, 1174
BmsI	GCATC	2 cut(s)	253, 864
BmuI	ACTGGG	3 cut(s)	360, 890, 1174
BpiI	GAAGAC	4 cut(s)	23, 174, 1034, 2064
BpmI	CTGGAG	1 cut(s)	410
Bpu10I	CCTNAGC	2 cut(s)	741, 1849
Bpu14I	TTCGAA	2 cut(s)	149, 642
BpuEI	CTTGAG	2 cut(s)	1227, 1670
BpuMI	CCSGG	1 cut(s)	1214
BsaAI	YACGTR	1 cut(s)	1694
BsaJI	CCNNGG	2 cut(s)	1725, 2028
BsaWI	WCCGGW	1 cut(s)	100
BsaXI	ACNNNNNCTCC	4 cut(s)	540, 570, 844, 874
Bsc4I	CCNNNNNNNGG	2 cut(s)	107, 425
Bse1I	ACTGG	4 cut(s)	355, 896, 1169, 2098
Bse3DI	GCAATG	1 cut(s)	125
BseBI	CCWGG	4 cut(s)	603, 952, 1023, 1749
BseDI	CCNNGG	2 cut(s)	1725, 2028
BseGI	GGATG	5 cut(s)	440, 631, 1077, 1443, 2041
BseLI	CCNNNNNNNGG	2 cut(s)	107, 425
BseMI	GCAATG	1 cut(s)	125
BseMII	CTCAG	5 cut(s)	236, 813, 820, 1100, 1427
BseNI	ACTGG	4 cut(s)	355, 896, 1169, 2098
BseRI	GAGGAG	3 cut(s)	1247, 1996, 2037
BseXI	GCAGC	5 cut(s)	286, 328, 479, 1360, 1849
Bsh1285I	CGRYCG	1 cut(s)	685
BshFI	GGCC	2 cut(s)	680, 1021
BshNI	GGYRCC	1 cut(s)	182
BsiEI	CGRYCG	1 cut(s)	685
BsiHKAI	GWGCWC	1 cut(s)	601
BsiSI	CCGG	3 cut(s)	101, 1018, 1213
BslFI	GGGAC	3 cut(s)	878, 1472, 1888
BslI	CCNNNNNNNGG	2 cut(s)	107, 425
BsmAI	GTCTC	4 cut(s)	50, 623, 1093, 2131
BsmBI	CGTCTC	2 cut(s)	50, 2131
BsmFI	GGGAC	3 cut(s)	878, 1472, 1888
BsmI	GAATGC	2 cut(s)	1004, 1612
BsnI	GGCC	2 cut(s)	680, 1021
Bsp119I	TTCGAA	2 cut(s)	149, 642
Bsp1286I	GDGCHC	2 cut(s)	528, 601
Bsp1407I	TGTACA	1 cut(s)	835
Bsp19I	CCATGG	1 cut(s)	2028
BspACI	CCGC	3 cut(s)	521, 848, 1931
BspANI	GGCC	2 cut(s)	680, 1021
BspCNI	CTCAG	5 cut(s)	235, 814, 819, 1099, 1426
BspHI	TCATGA	1 cut(s)	574
BspLI	GGNNCC	4 cut(s)	184, 720, 1845, 2026
BspMI	ACCTGC	1 cut(s)	194
BspPI	GGATC	6 cut(s)	92, 713, 726, 801, 812, 2083
BspT104I	TTCGAA	2 cut(s)	149, 642
BspT107I	GGYRCC	1 cut(s)	182
BsrBI	CCGCTC	1 cut(s)	1931
BsrDI	GCAATG	1 cut(s)	125
BsrGI	TGTACA	1 cut(s)	835
BsrI	ACTGG	4 cut(s)	355, 896, 1169, 2098
BssECI	CCNNGG	2 cut(s)	1725, 2028
BssT1I	CCWWGG	2 cut(s)	1725, 2028
Bst2UI	CCWGG	4 cut(s)	603, 952, 1023, 1749
Bst4CI	ACNGT	4 cut(s)	187, 686, 735, 883
Bst6I	CTCTTC	6 cut(s)	141, 319, 1031, 1665, 1890, 2012
BstAUI	TGTACA	1 cut(s)	835
BstBAI	YACGTR	1 cut(s)	1694
BstBI	TTCGAA	2 cut(s)	149, 642
BstDEI	CTNAG	9 cut(s)	21, 222, 741, 780, 806, 822, 1086, 1413, 1849
BstDSI	CCRYGG	1 cut(s)	2028
BstF5I	GGATG	5 cut(s)	440, 631, 1077, 1443, 2041
BstMAI	GTCTC	4 cut(s)	50, 623, 1093, 2131
BstMCI	CGRYCG	1 cut(s)	685
BstMWI	GCNNNNNNNGC	7 cut(s)	180, 616, 854, 1418, 1850, 1859, 1868
BstNI	CCWGG	4 cut(s)	603, 952, 1023, 1749
BstNSI	RCATGY	2 cut(s)	842, 919
BstSCI	CCNGG	5 cut(s)	601, 950, 1021, 1212, 1747
BstV1I	GCAGC	5 cut(s)	286, 328, 479, 1360, 1849
BstV2I	GAAGAC	4 cut(s)	23, 174, 1034, 2064
BstX2I	RGATCY	5 cut(s)	718, 793, 817, 1396, 1645
BstYI	RGATCY	5 cut(s)	718, 793, 817, 1396, 1645
BsuI	GTATCC	1 cut(s)	1401
BsuRI	GGCC	2 cut(s)	680, 1021
BtgI	CCRYGG	1 cut(s)	2028
BtsCI	GGATG	5 cut(s)	440, 631, 1077, 1443, 2041
BtsI	GCAGTG	1 cut(s)	86
BtsIMutI	CAGTG	1 cut(s)	86
BveI	ACCTGC	1 cut(s)	194
CaiI	CAGNNNCTG	2 cut(s)	664, 1877
CciI	TCATGA	1 cut(s)	574
Cfr13I	GGNCC	1 cut(s)	1440
CseI	GACGC	1 cut(s)	119
Csp6I	GTAC	5 cut(s)	826, 836, 1081, 1119, 1224
CspCI	CAANNNNNGTGG	2 cut(s)	108, 143
CviAII	CATG	9 cut(s)	311, 575, 622, 839, 916, 998, 1046, 2029, 2063
CviQI	GTAC	5 cut(s)	826, 836, 1081, 1119, 1224
DdeI	CTNAG	9 cut(s)	21, 222, 741, 780, 806, 822, 1086, 1413, 1849
Eam1104I	CTCTTC	6 cut(s)	141, 319, 1031, 1665, 1890, 2012
EarI	CTCTTC	6 cut(s)	141, 319, 1031, 1665, 1890, 2012
Eco130I	CCWWGG	2 cut(s)	1725, 2028
Eco24I	GRGCYC	1 cut(s)	528
Eco47I	GGWCC	1 cut(s)	1440
Eco57I	CTGAAG	9 cut(s)	95, 441, 599, 641, 1209, 1257, 1799, 1887, 1899
EcoRII	CCWGG	4 cut(s)	601, 950, 1021, 1747
EcoT14I	CCWWGG	2 cut(s)	1725, 2028
EcoT38I	GRGCYC	1 cut(s)	528
ErhI	CCWWGG	2 cut(s)	1725, 2028
Esp3I	CGTCTC	2 cut(s)	50, 2131
FaeI	CATG	9 cut(s)	314, 578, 625, 842, 919, 1001, 1049, 2032, 2066
FalI	AAGNNNNNCTT	4 cut(s)	1635, 1667, 1872, 1904
FaqI	GGGAC	3 cut(s)	878, 1472, 1888
FatI	CATG	9 cut(s)	310, 574, 621, 838, 915, 997, 1045, 2028, 2062
FauI	CCCGC	1 cut(s)	514
FblI	GTMKAC	1 cut(s)	1968
Fnu4HI	GCNGC	5 cut(s)	300, 342, 468, 1374, 1863
FokI	GGATG	5 cut(s)	447, 638, 1084, 1430, 2048
FriOI	GRGCYC	1 cut(s)	528
Fsp4HI	GCNGC	5 cut(s)	300, 342, 468, 1374, 1863
FspBI	CTAG	4 cut(s)	345, 797, 1134, 1362
GluI	GCNGC	5 cut(s)	300, 342, 468, 1374, 1863
GsuI	CTGGAG	1 cut(s)	410
HaeIII	GGCC	2 cut(s)	680, 1021
HapII	CCGG	3 cut(s)	101, 1018, 1213
HgaI	GACGC	1 cut(s)	119
Hin1II	CATG	9 cut(s)	314, 578, 625, 842, 919, 1001, 1049, 2032, 2066
HpaII	CCGG	3 cut(s)	101, 1018, 1213
HphI	GGTGA	3 cut(s)	932, 1202, 1667
Hpy166II	GTNNAC	5 cut(s)	650, 836, 1081, 1162, 1969
Hpy8I	GTNNAC	5 cut(s)	650, 836, 1081, 1162, 1969
HpyAV	CCTTC	6 cut(s)	539, 556, 1281, 1432, 1449, 1823
HpyCH4III	ACNGT	4 cut(s)	187, 686, 735, 883
HpyCH4IV	ACGT	2 cut(s)	273, 1693
HpyCH4V	TGCA	7 cut(s)	203, 770, 842, 877, 997, 1351, 1610
HpyF10VI	GCNNNNNNNGC	7 cut(s)	180, 616, 854, 1418, 1850, 1859, 1868
HpyF3I	CTNAG	9 cut(s)	21, 222, 741, 780, 806, 822, 1086, 1413, 1849
HpySE526I	ACGT	2 cut(s)	273, 1693
Hsp92II	CATG	9 cut(s)	314, 578, 625, 842, 919, 1001, 1049, 2032, 2066
LmnI	GCTCC	6 cut(s)	604, 1020, 1260, 1849, 1928, 2024
Lsp1109I	GCAGC	5 cut(s)	286, 328, 479, 1360, 1849
LweI	GCATC	2 cut(s)	253, 864
MaeI	CTAG	4 cut(s)	345, 797, 1134, 1362
MaeII	ACGT	2 cut(s)	273, 1693
MaeIII	GTNAC	3 cut(s)	225, 396, 850
MbiI	CCGCTC	1 cut(s)	1931
MflI	RGATCY	5 cut(s)	718, 793, 817, 1396, 1645
MhlI	GDGCHC	2 cut(s)	528, 601
MlyI	GAGTC	6 cut(s)	424, 625, 798, 1048, 1066, 1522
MmeI	TCCRAC	3 cut(s)	476, 696, 887
MroXI	GAANNNNTTC	1 cut(s)	1737
MseI	TTAA	5 cut(s)	12, 530, 945, 1554, 2010
MslI	CAYNNNNRTG	1 cut(s)	624
MspI	CCGG	3 cut(s)	101, 1018, 1213
MspR9I	CCNGG	5 cut(s)	603, 952, 1023, 1214, 1749
Mva1269I	GAATGC	2 cut(s)	1004, 1612
MvaI	CCWGG	4 cut(s)	603, 952, 1023, 1749
MwoI	GCNNNNNNNGC	7 cut(s)	180, 616, 854, 1418, 1850, 1859, 1868
NciI	CCSGG	1 cut(s)	1214
NcoI	CCATGG	1 cut(s)	2028
NlaIII	CATG	9 cut(s)	314, 578, 625, 842, 919, 1001, 1049, 2032, 2066
NlaIV	GGNNCC	4 cut(s)	184, 720, 1845, 2026
NspI	RCATGY	2 cut(s)	842, 919
NspV	TTCGAA	2 cut(s)	149, 642
PagI	TCATGA	1 cut(s)	574
PaqCI	CACCTGC	1 cut(s)	194
PciI	ACATGT	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	2 cut(s)	162, 242
PctI	GAATGC	2 cut(s)	1004, 1612
PdmI	GAANNNNTTC	1 cut(s)	1737
PflFI	GACNNNGTC	1 cut(s)	686
PfoI	TCCNGGA	1 cut(s)	950
PkrI	GCNGC	5 cut(s)	301, 343, 469, 1375, 1864
PleI	GAGTC	6 cut(s)	423, 625, 798, 1047, 1065, 1522
PpsI	GAGTC	6 cut(s)	423, 625, 798, 1047, 1065, 1522
Ppu21I	YACGTR	1 cut(s)	1694
PscI	ACATGT	1 cut(s)	915
Psp6I	CCWGG	4 cut(s)	601, 950, 1021, 1747
PspGI	CCWGG	4 cut(s)	601, 950, 1021, 1747
PspN4I	GGNNCC	4 cut(s)	184, 720, 1845, 2026
PspPI	GGNCC	1 cut(s)	1440
PsrI	GAACNNNNNNTAC	2 cut(s)	1073, 1105
PstNI	CAGNNNCTG	2 cut(s)	664, 1877
PsuI	RGATCY	5 cut(s)	718, 793, 817, 1396, 1645
PsyI	GACNNNGTC	1 cut(s)	686
RsaI	GTAC	5 cut(s)	827, 837, 1082, 1120, 1225
RsaNI	GTAC	5 cut(s)	826, 836, 1081, 1119, 1224
RseI	CAYNNNNRTG	1 cut(s)	624
SaqAI	TTAA	5 cut(s)	12, 530, 945, 1554, 2010
SatI	GCNGC	5 cut(s)	300, 342, 468, 1374, 1863
Sau96I	GGNCC	1 cut(s)	1440
SchI	GAGTC	6 cut(s)	424, 625, 798, 1048, 1066, 1522
ScrFI	CCNGG	5 cut(s)	603, 952, 1023, 1214, 1749
SduI	GDGCHC	2 cut(s)	528, 601
SfaNI	GCATC	2 cut(s)	253, 864
SfuI	TTCGAA	2 cut(s)	149, 642
SinI	GGWCC	1 cut(s)	1440
SmiMI	CAYNNNNRTG	1 cut(s)	624
SmlI	CTYRAG	2 cut(s)	1242, 1685
SmoI	CTYRAG	2 cut(s)	1242, 1685
SsiI	CCGC	3 cut(s)	521, 848, 1931
SspI	AATATT	1 cut(s)	586
SspMI	CTAG	4 cut(s)	345, 797, 1134, 1362
StyD4I	CCNGG	5 cut(s)	601, 950, 1021, 1212, 1747
StyI	CCWWGG	2 cut(s)	1725, 2028
TaaI	ACNGT	4 cut(s)	187, 686, 735, 883
TaiI	ACGT	2 cut(s)	276, 1696
TaqI	TCGA	6 cut(s)	57, 87, 149, 642, 1490, 1808
TatI	WGTACW	4 cut(s)	825, 835, 1080, 1118
Tru1I	TTAA	5 cut(s)	12, 530, 945, 1554, 2010
Tru9I	TTAA	5 cut(s)	12, 530, 945, 1554, 2010
TscAI	CASTG	1 cut(s)	86
TseI	GCWGC	5 cut(s)	299, 341, 467, 1373, 1862
TspGWI	ACGGA	1 cut(s)	2164
TspRI	CASTG	1 cut(s)	86
Tth111I	GACNNNGTC	1 cut(s)	686
VpaK11BI	GGWCC	1 cut(s)	1440
XapI	RAATTY	2 cut(s)	989, 2204
XceI	RCATGY	2 cut(s)	842, 919
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2069
XmiI	GTMKAC	1 cut(s)	1968
XmnI	GAANNNNTTC	1 cut(s)	1737
XspI	CTAG	4 cut(s)	345, 797, 1134, 1362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.