Rorug04G0366700

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000223
Physical Location & Seq
Forward (+)
53805593 .. 53808896
3304 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0366700.1

Sequence Viewer

Length: 1089 bp
ATGATGCTGCATTTTCGAGACCCAGCAAACCTGAAGACCAAGAAGATTGTGTTTGAGGAGGCGTATGCTGCTTGTGATTCTGCAACACTTGAACAGCTGAAAGAGTTGAGCTCTAAGCGTAGGATTCTCGAGGAGTCAACTAATGAGAGCAGCCCCATTACTAAGGCCATTGCAAGGGAAATGTCTGGAGGGTTAACTTCCCAGTCTCAACAGGTTCTTCAAAAACTAGAACTGTATCTTCCAGTGTTGGAAAATTTATTCTTCCACATTGATTTGATCAGCAGCAACGAACAGATAGTTCAGTGGACTTCAGAACTCAAGATACAATGGACTAGTGCTCTTAGTTCATCATCGTTCTTTAACTTTGGAGGTTCGAAATATTTTCAAATAGATAACTTGCAATTTGAGATTGTTATGACTCTTTTCCTTTATGGCGCAATCCTTCGGGAGAGAGCATCAGAAGTTCTTCCATCAGACCTTTTGAAATCTGCGACCCTTTTCAGAGAAGCTGCTGGTGTTTATCACTATCTTGCTCATCAGGTCCTTCCTTCTCTACAGCCTTCAGTCCCTGTGGAAAAGCCACCAGAAGTTGTTCCATCTGTGTCCACTGTCATGAGCCTTATTTGTTTGGCTGAGGCCCAGGCAGTAACAATAAAGAGGGCTGAAGAGAAGGGTACTACTGTTGGTCTATTGGCAAAGTTGCACCATGGTGTTGTAGAGTTGCTTGATGAAGCCGCATGTGCTTTACATACAGCTTCCATGGAATGCAAAGATATTTCTTCACGCTTTGTGGAATTCATCACATCTTGCAAAGAGTTGCATGAGTTAAAAAGTCAGAAATACTTGGCTGAAAGCCTGAAGAATAATAATGATGGCCAATTCGGGGTTGCTGTTGGACTTCTTCGACGTGCACTGATCAATGCGAAAAGGAAAATACCAAGTGAAGAATCTTGGAAATCTGTTTTCAAAAAGGAAATTGATGATTTTGCCGAATTACTCAGGAAGCATGAACATGAAAATGAATTTGTCTGGCATGAGAAAATCCCCTCTGGTGATGAGTTGCCAAAACCCGATGGTATCTTGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006353 GO:0006355 GO:0006357 GO:0006364 GO:0006366 GO:0006369 GO:0006378 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008033 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016180 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019904 GO:0022613 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032574 GO:0032575 GO:0032774 GO:0032991 GO:0033554 GO:0033677 GO:0033678 GO:0033680 GO:0033682 GO:0034470 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035649 GO:0042254 GO:0042592 GO:0042623 GO:0043139 GO:0043141 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043618 GO:0043620 GO:0043628 GO:0043631 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045005 GO:0045454 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:1990248 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

362

Amino Acids

40.72

Weight (kDa)

5.66

Isoelectric Point (pI)

51.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRO1 PF03097 70 - 356 9.1e-28 BRO1-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000223)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26390 FvH4_1g26391 FvH4_2g00700 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36210 FvH4_4g36221 FvH4_4g36250 FvH4_4g36250 FvH4_4g36250 FvH4_4g36280 FvH4_4g36280 FvH4_5g34990
malus_domestica MD09G1274800.v1.1 MD09G1274900.v1.1 MD09G1275500.v1.1 MD13G1010700.v1.1 MD16G1270700.v1.1
prunus_persica Prupe.1G087400_v2.0.a1 Prupe.1G134300_v2.0.a1 Prupe.1G215600_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G342300_v2.0.a1 Prupe.8G106200_v2.0.a1 Prupe.8G106200_v2.0.a1
pyrus_communis pycom09g18530 pycom09g18550 pycom09g18590 pycom13g00880 pycom16g24010
rosa_chinensis RchiOBHm_Chr2g0116911 RchiOBHm_Chr2g0116921 RchiOBHm_Chr3g0486161 RchiOBHm_Chr3g0486171 RchiOBHm_Chr4g0445931 RchiOBHm_Chr4g0445961 RchiOBHm_Chr4g0445971 RchiOBHm_Chr4g0445991 RchiOBHm_Chr4g0446001 RchiOBHm_Chr4g0446011 RchiOBHm_Chr4g0446031
rosa_laevigata RLG00000002343 RLG00000005696 RLG00000005698 RLG00000005699 RLG00000005701 RLG00000005703 RLG00000018313 RLG00000023096 RLG00000023099
rosa_multiflora Rmu_co8408865.1_g000001 Rmu_co8420123.1_g000001 Rmu_sc0000372.1_g000002 Rmu_sc0003001.1_g000002 Rmu_sc0003001.1_g000003 Rmu_sc0003001.1_g000006 Rmu_sc0003001.1_g000007 Rmu_sc0006315.1_g000012 Rmu_sc0007511.1_g000001 Rmu_sc0008543.1_g000001 Rmu_sc0009534.1_g000001 Rmu_sc0024967.1_g000001 Rmu_sc0036469.1_g000001 Rmu_ssc0000238.1_g000032
rosa_roxburghii Rroxscaffold_2G00126890 Rroxscaffold_5G00386350 Rroxscaffold_5G00386360 Rroxscaffold_5G00386370 Rroxscaffold_5G00386380 Rroxscaffold_5G00386400 Rroxscaffold_5G00386410 Rroxscaffold_5G00386430 Rroxscaffold_5G00386440 Rroxscaffold_6G00396020
rosa_rugosa Rorug03G0223800 Rorug03G0223800 Rorug03G0223800 Rorug04G0366100 Rorug04G0366200 Rorug04G0366300 Rorug04G0366400 Rorug04G0366500 Rorug04G0366600 Rorug04G0366600 Rorug04G0366700 Rorug04G0366700
rosa_samantha Rh1AG167300 Rh2AG265000 Rh2BG276500 Rh2DG272400 Rh2DG291200 Rh2DG291300 Rh2DG291400 Rh3AG273600 Rh3AG273700 Rh3BG308800 Rh3BG309000 Rh3CG307200 Rh3DG303500 Rh4AG427400 Rh4AG427700 Rh4AG427800 Rh4AG427900 Rh4AG428000 Rh4AG428300 Rh4AG428400 Rh4AG428500 Rh4AG428600 Rh4AG428700 Rh4BG426000 Rh4BG437600 Rh4BG437800 Rh4BG437900 Rh4BG438100 Rh4CG454300 Rh4CG454500 Rh4CG454600 Rh4CG454700 Rh4CG454800 Rh4CG454900 Rh4CG455200 Rh4CG455500 Rh4DG435700 Rh4DG435800 Rh4DG435900 Rh4DG436000 Rh4DG436100 Rh4DG436300 Rh4DG436600
rosa_wichuraiana Rw2G020880 Rw3G024250 Rw4G036590 Rw4G036600 Rw4G036620 Rw4G036630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 735
AcoI YGGCCR 1 cut(s) 874
AcsI RAATTY 3 cut(s) 253, 794, 1022
AcuI CTGAAG 5 cut(s) 53, 294, 546, 684, 878
AfaI GTAC 1 cut(s) 676
AfiI CCNNNNNNNGG 2 cut(s) 174, 883
AgsI TTSAA 5 cut(s) 92, 221, 386, 484, 967
AhlI ACTAGT 1 cut(s) 332
AjiI CACGTC 1 cut(s) 908
AjnI CCWGG 1 cut(s) 639
AleI CACNNNNGTG 1 cut(s) 708
AluBI AGCT 4 cut(s) 97, 111, 509, 755
AluI AGCT 4 cut(s) 97, 111, 509, 755
Alw21I GWGCWC 3 cut(s) 113, 340, 913
Alw26I GTCTC 2 cut(s) 12, 210
Alw44I GTGCAC 1 cut(s) 909
AlwNI CAGNNNCTG 1 cut(s) 569
Ama87I CYCGRG 1 cut(s) 128
AoxI GGCC 3 cut(s) 165, 636, 874
ApaLI GTGCAC 1 cut(s) 909
ApeKI GCWGC 5 cut(s) 7, 68, 150, 282, 509
ApoI RAATTY 3 cut(s) 253, 794, 1022
Asp700I GAANNNNTTC 2 cut(s) 465, 591
AspLEI GCGC 1 cut(s) 437
AspS9I GGNCC 2 cut(s) 541, 637
AsuHPI GGTGA 1 cut(s) 1064
AsuII TTCGAA 1 cut(s) 374
AvaI CYCGRG 1 cut(s) 128
AvaII GGWCC 1 cut(s) 541
BaeGI GKGCMC 1 cut(s) 913
BaeI ACNNNNGTAYC 2 cut(s) 666, 699
BalI TGGCCA 1 cut(s) 876
BanII GRGCYC 1 cut(s) 113
BbsI GAAGAC 1 cut(s) 41
Bbv12I GWGCWC 3 cut(s) 113, 340, 913
BbvCI CCTCAGC 1 cut(s) 633
BbvI GCAGC 4 cut(s) 55, 162, 294, 496
BccI CCATC 4 cut(s) 478, 604, 866, 1067
BciT130I CCWGG 1 cut(s) 641
BclI TGATCA 2 cut(s) 276, 915
BcoDI GTCTC 2 cut(s) 12, 210
BcuI ACTAGT 1 cut(s) 332
BfaI CTAG 2 cut(s) 227, 333
BfmI CTRYAG 1 cut(s) 554
BisI GCNGC 6 cut(s) 8, 69, 151, 283, 510, 735
BlsI GCNGC 6 cut(s) 9, 70, 152, 284, 511, 736
Bme1390I CCNGG 1 cut(s) 641
Bme18I GGWCC 1 cut(s) 541
BmeT110I CYCGRG 1 cut(s) 128
BmgBI CACGTC 1 cut(s) 908
BmgT120I GGNCC 2 cut(s) 541, 637
BmrFI CCNGG 1 cut(s) 641
BmrI ACTGGG 1 cut(s) 196
BmsI GCATC 1 cut(s) 464
BmuI ACTGGG 1 cut(s) 196
BpiI GAAGAC 1 cut(s) 41
BplI GAGNNNNNCTC 2 cut(s) 95, 127
BpmI CTGGAG 1 cut(s) 207
Bpu10I CCTNAGC 1 cut(s) 633
Bpu14I TTCGAA 1 cut(s) 374
BpuEI CTTGAG 1 cut(s) 302
BsaI GGTCTC 1 cut(s) 12
BsaJI CCNNGG 3 cut(s) 639, 706, 759
Bsc4I CCNNNNNNNGG 2 cut(s) 174, 883
Bse1I ACTGG 2 cut(s) 202, 242
Bse3DI GCAATG 1 cut(s) 168
BseBI CCWGG 1 cut(s) 641
BseDI CCNNGG 3 cut(s) 639, 706, 759
BseLI CCNNNNNNNGG 2 cut(s) 174, 883
BseMI GCAATG 1 cut(s) 168
BseMII CTCAG 2 cut(s) 624, 1012
BseNI ACTGG 2 cut(s) 202, 242
BseRI GAGGAG 2 cut(s) 71, 146
BseSI GKGCMC 1 cut(s) 913
BseXI GCAGC 4 cut(s) 55, 162, 294, 496
BseYI CCCAGC 1 cut(s) 22
BshFI GGCC 3 cut(s) 167, 638, 876
BsiHKAI GWGCWC 3 cut(s) 113, 340, 913
BsiHKCI CYCGRG 1 cut(s) 128
BslFI GGGAC 1 cut(s) 551
BslI CCNNNNNNNGG 2 cut(s) 174, 883
BsmAI GTCTC 2 cut(s) 12, 210
BsmFI GGGAC 1 cut(s) 551
BsmI GAATGC 1 cut(s) 770
BsnI GGCC 3 cut(s) 167, 638, 876
Bso31I GGTCTC 1 cut(s) 12
BsoBI CYCGRG 1 cut(s) 128
Bsp119I TTCGAA 1 cut(s) 374
Bsp1286I GDGCHC 3 cut(s) 113, 340, 913
Bsp143I GATC 2 cut(s) 276, 915
Bsp19I CCATGG 2 cut(s) 706, 759
BspACI CCGC 1 cut(s) 735
BspANI GGCC 3 cut(s) 167, 638, 876
BspCNI CTCAG 2 cut(s) 625, 1011
BspHI TCATGA 1 cut(s) 612
BspT104I TTCGAA 1 cut(s) 374
BspTNI GGTCTC 1 cut(s) 12
BsrDI GCAATG 1 cut(s) 168
BsrI ACTGG 2 cut(s) 202, 242
BssECI CCNNGG 3 cut(s) 639, 706, 759
BssMI GATC 2 cut(s) 276, 915
BssT1I CCWWGG 2 cut(s) 706, 759
Bst2UI CCWGG 1 cut(s) 641
Bst4CI ACNGT 3 cut(s) 234, 610, 682
Bst6I CTCTTC 1 cut(s) 660
BstBI TTCGAA 1 cut(s) 374
BstDEI CTNAG 5 cut(s) 114, 162, 341, 633, 998
BstDSI CCRYGG 2 cut(s) 706, 759
BstHHI GCGC 1 cut(s) 437
BstKTI GATC 2 cut(s) 279, 918
BstMAI GTCTC 2 cut(s) 12, 210
BstMBI GATC 2 cut(s) 276, 915
BstMWI GCNNNNNNNGC 2 cut(s) 68, 740
BstNI CCWGG 1 cut(s) 641
BstNSI RCATGY 1 cut(s) 741
BstSCI CCNGG 1 cut(s) 639
BstSFI CTRYAG 1 cut(s) 554
BstSLI GKGCMC 1 cut(s) 913
BstV1I GCAGC 4 cut(s) 55, 162, 294, 496
BstV2I GAAGAC 1 cut(s) 41
BsuRI GGCC 3 cut(s) 167, 638, 876
BtgI CCRYGG 2 cut(s) 706, 759
BtrI CACGTC 1 cut(s) 908
BtsIMutI CAGTG 4 cut(s) 249, 308, 606, 911
CaiI CAGNNNCTG 1 cut(s) 569
CciI TCATGA 1 cut(s) 612
CfoI GCGC 1 cut(s) 437
Cfr13I GGNCC 2 cut(s) 541, 637
Csp6I GTAC 1 cut(s) 675
CviAII CATG 8 cut(s) 613, 707, 738, 760, 821, 1007, 1013, 1034
CviQI GTAC 1 cut(s) 675
DdeI CTNAG 5 cut(s) 114, 162, 341, 633, 998
DpnI GATC 2 cut(s) 278, 917
DpnII GATC 2 cut(s) 276, 915
EaeI YGGCCR 1 cut(s) 874
Eam1104I CTCTTC 1 cut(s) 660
EarI CTCTTC 1 cut(s) 660
Ecl136II GAGCTC 1 cut(s) 111
Eco130I CCWWGG 2 cut(s) 706, 759
Eco24I GRGCYC 1 cut(s) 113
Eco31I GGTCTC 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 541
Eco53kI GAGCTC 1 cut(s) 111
Eco57I CTGAAG 5 cut(s) 53, 294, 546, 684, 878
Eco88I CYCGRG 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 111
EcoO109I RGGNCCY 1 cut(s) 541
EcoRI GAATTC 1 cut(s) 794
EcoRII CCWGG 1 cut(s) 639
EcoT14I CCWWGG 2 cut(s) 706, 759
EcoT38I GRGCYC 1 cut(s) 113
ErhI CCWWGG 2 cut(s) 706, 759
FaeI CATG 8 cut(s) 616, 710, 741, 763, 824, 1010, 1016, 1037
FaqI GGGAC 1 cut(s) 551
FatI CATG 8 cut(s) 612, 706, 737, 759, 820, 1006, 1012, 1033
FbaI TGATCA 2 cut(s) 276, 915
Fnu4HI GCNGC 6 cut(s) 8, 69, 151, 283, 510, 735
FriOI GRGCYC 1 cut(s) 113
Fsp4HI GCNGC 6 cut(s) 8, 69, 151, 283, 510, 735
FspBI CTAG 2 cut(s) 227, 333
GlaI GCGC 1 cut(s) 436
GluI GCNGC 6 cut(s) 8, 69, 151, 283, 510, 735
GsaI CCCAGC 1 cut(s) 26
GsuI CTGGAG 1 cut(s) 207
HaeIII GGCC 3 cut(s) 167, 638, 876
HhaI GCGC 1 cut(s) 437
Hin1II CATG 8 cut(s) 616, 710, 741, 763, 824, 1010, 1016, 1037
Hin6I GCGC 1 cut(s) 435
HinP1I GCGC 1 cut(s) 435
HincII GTYRAC 2 cut(s) 138, 195
HindII GTYRAC 2 cut(s) 138, 195
HinfI GANTC 5 cut(s) 77, 124, 134, 418, 947
HpaI GTTAAC 1 cut(s) 195
HphI GGTGA 1 cut(s) 1064
Hpy166II GTNNAC 5 cut(s) 138, 195, 306, 606, 911
Hpy188I TCNGA 5 cut(s) 313, 460, 475, 503, 837
Hpy188III TCNNGA 7 cut(s) 17, 128, 186, 319, 446, 613, 1000
Hpy8I GTNNAC 5 cut(s) 138, 195, 306, 606, 911
Hpy99I CGWCG 1 cut(s) 909
HpyAV CCTTC 5 cut(s) 452, 554, 558, 570, 664
HpyCH4III ACNGT 3 cut(s) 234, 610, 682
HpyCH4IV ACGT 1 cut(s) 907
HpyCH4V TGCA 9 cut(s) 10, 83, 173, 400, 703, 768, 810, 820, 911
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 740
HpyF3I CTNAG 5 cut(s) 114, 162, 341, 633, 998
HpySE526I ACGT 1 cut(s) 907
Hsp92II CATG 8 cut(s) 616, 710, 741, 763, 824, 1010, 1016, 1037
HspAI GCGC 1 cut(s) 435
Ksp22I TGATCA 2 cut(s) 276, 915
KspAI GTTAAC 1 cut(s) 195
Kzo9I GATC 2 cut(s) 276, 915
Lsp1109I GCAGC 4 cut(s) 55, 162, 294, 496
LweI GCATC 1 cut(s) 464
MaeI CTAG 2 cut(s) 227, 333
MaeII ACGT 1 cut(s) 907
MaeIII GTNAC 1 cut(s) 646
MalI GATC 2 cut(s) 278, 917
MboI GATC 2 cut(s) 276, 915
MhlI GDGCHC 3 cut(s) 113, 340, 913
MlsI TGGCCA 1 cut(s) 876
MluCI AATT 7 cut(s) 253, 401, 794, 878, 975, 992, 1022
MluNI TGGCCA 1 cut(s) 876
MlyI GAGTC 2 cut(s) 143, 412
MmeI TCCRAC 2 cut(s) 228, 874
MnlI CCTC 8 cut(s) 49, 52, 124, 182, 362, 628, 651, 1057
Mox20I TGGCCA 1 cut(s) 876
MroXI GAANNNNTTC 2 cut(s) 465, 591
MscI TGGCCA 1 cut(s) 876
MseI TTAA 3 cut(s) 194, 360, 827
MslI CAYNNNNRTG 4 cut(s) 611, 708, 1011, 1017
Msp20I TGGCCA 1 cut(s) 876
MspA1I CMGCKG 1 cut(s) 97
MspR9I CCNGG 1 cut(s) 641
Mva1269I GAATGC 1 cut(s) 770
MvaI CCWGG 1 cut(s) 641
MwoI GCNNNNNNNGC 2 cut(s) 68, 740
NcoI CCATGG 2 cut(s) 706, 759
NdeII GATC 2 cut(s) 276, 915
NlaIII CATG 8 cut(s) 616, 710, 741, 763, 824, 1010, 1016, 1037
NspI RCATGY 1 cut(s) 741
NspV TTCGAA 1 cut(s) 374
OliI CACNNNNGTG 1 cut(s) 708
PaeR7I CTCGAG 1 cut(s) 128
PagI TCATGA 1 cut(s) 612
PctI GAATGC 1 cut(s) 770
PdmI GAANNNNTTC 2 cut(s) 465, 591
PfeI GAWTC 3 cut(s) 77, 124, 947
PkrI GCNGC 6 cut(s) 9, 70, 152, 284, 511, 736
PleI GAGTC 2 cut(s) 142, 412
PpsI GAGTC 2 cut(s) 142, 412
PpuMI RGGWCCY 1 cut(s) 541
Psp124BI GAGCTC 1 cut(s) 113
Psp5II RGGWCCY 1 cut(s) 541
Psp6I CCWGG 1 cut(s) 639
PspFI CCCAGC 1 cut(s) 22
PspGI CCWGG 1 cut(s) 639
PspPI GGNCC 2 cut(s) 541, 637
PspPPI RGGWCCY 1 cut(s) 541
PsrI GAACNNNNNNTAC 2 cut(s) 306, 338
PstNI CAGNNNCTG 1 cut(s) 569
PvuII CAGCTG 1 cut(s) 97
RsaI GTAC 1 cut(s) 676
RsaNI GTAC 1 cut(s) 675
RseI CAYNNNNRTG 4 cut(s) 611, 708, 1011, 1017
SacI GAGCTC 1 cut(s) 113
SaqAI TTAA 3 cut(s) 194, 360, 827
SatI GCNGC 6 cut(s) 8, 69, 151, 283, 510, 735
Sau3AI GATC 2 cut(s) 276, 915
Sau96I GGNCC 2 cut(s) 541, 637
SchI GAGTC 2 cut(s) 143, 412
ScrFI CCNGG 1 cut(s) 641
SduI GDGCHC 3 cut(s) 113, 340, 913
SfaNI GCATC 1 cut(s) 464
SfcI CTRYAG 1 cut(s) 554
Sfr274I CTCGAG 1 cut(s) 128
SfuI TTCGAA 1 cut(s) 374
SinI GGWCC 1 cut(s) 541
SlaI CTCGAG 1 cut(s) 128
SmiMI CAYNNNNRTG 4 cut(s) 611, 708, 1011, 1017
SmlI CTYRAG 2 cut(s) 128, 317
SmoI CTYRAG 2 cut(s) 128, 317
SpeI ACTAGT 1 cut(s) 332
Sse9I AATT 7 cut(s) 253, 401, 794, 878, 975, 992, 1022
SsiI CCGC 1 cut(s) 735
SspI AATATT 1 cut(s) 380
SspMI CTAG 2 cut(s) 227, 333
SstI GAGCTC 1 cut(s) 113
StyD4I CCNGG 1 cut(s) 639
StyI CCWWGG 2 cut(s) 706, 759
TaaI ACNGT 3 cut(s) 234, 610, 682
TaiI ACGT 1 cut(s) 910
TaqI TCGA 4 cut(s) 16, 129, 374, 904
TasI AATT 7 cut(s) 253, 401, 794, 878, 975, 992, 1022
TauI GCSGC 1 cut(s) 737
TfiI GAWTC 3 cut(s) 77, 124, 947
Tru1I TTAA 3 cut(s) 194, 360, 827
Tru9I TTAA 3 cut(s) 194, 360, 827
TscAI CASTG 4 cut(s) 249, 308, 613, 918
TseI GCWGC 5 cut(s) 7, 68, 150, 282, 509
TspDTI ATGAA 6 cut(s) 336, 744, 787, 1023, 1029, 1035
TspRI CASTG 4 cut(s) 249, 308, 613, 918
VneI GTGCAC 1 cut(s) 909
VpaK11BI GGWCC 1 cut(s) 541
XapI RAATTY 3 cut(s) 253, 794, 1022
XceI RCATGY 1 cut(s) 741
XhoI CTCGAG 1 cut(s) 128
XmnI GAANNNNTTC 2 cut(s) 465, 591
XspI CTAG 2 cut(s) 227, 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.