MD09G1274800.v1.1

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000223
Physical Location & Seq
Reverse (-)
35205097 .. 35206776
1680 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1274800.v1.1.491

Sequence Viewer

Length: 1680 bp
ATGTTGGTTGATGATCTGATAAAGTGTTCAGCAAGTGGAATACCTGAAAATCAAGTTTCCATGGACTCGTTGATTTACTTCTGGAATTTTTGGAAGGATAAAATTGCTCACATATTTGAATATCTCAGATGCCTTGAAACCCAGGAAGTTAGTAAATACAAAAGTTATGGAGAGTTTTGCTTGAATTACTTAGGAGTTTGGACAATGGATCTTAATCAGAGTCCAGTTTATGGTTTACTGATTCCTGATGCTGATTGGGTTCGTGGTTTGAACAAAAGATATTTTGGAAATCAAGGGAAATTGATCTCCGTTGATGCTCGCCAGCTTGCTTCAGCCGCTAGAAATTATTGGAGTTCAAAATTGCTCTCTGTTGGCATGAAGGTTTTGGACAAGCTGAAAGTGCTCTACAAGTTTCCCGTCAATAATGCTGAGTCAGTGTTCTGTCAAAGCAGGTGCGTTACCTATATCTATGATGTCTCGGTGTATCTTTTGCAATCAAAATGTTTGAACTTAAATGATGCCAAGAGATTGCACAAATTTATAACATTTTCGATCGAAATTATTGTTCCTTTGGTATTTCCTTTGGATTGGAGGAATTCATTGAGGGAGAATATGATTTCTCTTCGAAGAACTGATGCTTCAAAGAATATGCTGAAACAAGTAATTCAGGAGTTAACCAGATCGAAGAATGAGTTATCTTTTGGGAAAATTGGGAAACTTGTAATGGTCATTCTGGGGACTGGTAAGCTTACTAATGAGCTGTATGAGAAGCTTGTGAGAAAACTTAGCTGCAACCTGCCATGGCAGGCTTTCATCAAGAATCTCTATGGGAATATTGAACGTGGAAACACCGGTCAAGAACCGAAAGAGGTGTATGTAATGTTGAGGTTCCATGAAGCTTTAGCTGAAACTTATTATGTGAACTGGAGGGCTGTGAAGGATTATGTAACACCTGGTTGCTTTTTATACCTTGTAGAGCGCCTTCTGCTATGGGCAACTTGCTTTCGGGGTTATGCTATCACTACAAGTTCTTGTTTTACCGAGTGGCTTATATACCAAGGGGAAGATACCAGCTTAAGTTTGAGGGGGGCTGATGTTCGACCATCTTTGGATGGCATCTGTTGTTTTGTGATTGATGTGGCTCGGGAGTGCATTTTCAATAAGGGGGATATGGTTGAATGGATTACAAAGTCCATCGAAGATTGGAAGAACTGCTATTCACTACTCATGTTGAGATTGGTCGTCTTGTTATGCTTGGTTTATGTGAATCGTGGTAGTGGTCTAAATTTACTCCGTGAGTTGGTGGAGAGGGAAGATATCACTGAACTGCTGCCGCTGGAGTTTTATGACACCCTCAAAAGCAGGAGCCGCCGCAAATCTGTTTGGTTAGATGTGAATGTGCTCGCGGCAGCTCTTAAGAAGGTCGGTAACACGTTAGTAATAGCAAGTTTTGGGACCAATTCGGGGTTGTTGTGTTCAGATGCTGTCTTTGTTGACATGAAGGCCAACCAGTCTAGGGATGACATATTGAGAAAATTGTTTCCTAAACCACCGGTCCTAAAAGCTTTGCAAGCTGGATCTTGCAGTCGTGTGCTTTGTGCAACCAATTCTGAGGAGGGGAAGACTGGCGCTGCATTAGATAAGCCACGCGACACTGGGGAAAGTCGCACTATATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

560

Amino Acids

63.88

Weight (kDa)

8.82

Isoelectric Point (pI)

33.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000223)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26390 FvH4_1g26391 FvH4_2g00700 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36210 FvH4_4g36221 FvH4_4g36250 FvH4_4g36250 FvH4_4g36250 FvH4_4g36280 FvH4_4g36280 FvH4_5g34990
malus_domestica MD09G1274800.v1.1 MD09G1274900.v1.1 MD09G1275500.v1.1 MD13G1010700.v1.1 MD16G1270700.v1.1
prunus_persica Prupe.1G087400_v2.0.a1 Prupe.1G134300_v2.0.a1 Prupe.1G215600_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G342300_v2.0.a1 Prupe.8G106200_v2.0.a1 Prupe.8G106200_v2.0.a1
pyrus_communis pycom09g18530 pycom09g18550 pycom09g18590 pycom13g00880 pycom16g24010
rosa_chinensis RchiOBHm_Chr2g0116911 RchiOBHm_Chr2g0116921 RchiOBHm_Chr3g0486161 RchiOBHm_Chr3g0486171 RchiOBHm_Chr4g0445931 RchiOBHm_Chr4g0445961 RchiOBHm_Chr4g0445971 RchiOBHm_Chr4g0445991 RchiOBHm_Chr4g0446001 RchiOBHm_Chr4g0446011 RchiOBHm_Chr4g0446031
rosa_laevigata RLG00000002343 RLG00000005696 RLG00000005698 RLG00000005699 RLG00000005701 RLG00000005703 RLG00000018313 RLG00000023096 RLG00000023099
rosa_multiflora Rmu_co8408865.1_g000001 Rmu_co8420123.1_g000001 Rmu_sc0000372.1_g000002 Rmu_sc0003001.1_g000002 Rmu_sc0003001.1_g000003 Rmu_sc0003001.1_g000006 Rmu_sc0003001.1_g000007 Rmu_sc0006315.1_g000012 Rmu_sc0007511.1_g000001 Rmu_sc0008543.1_g000001 Rmu_sc0009534.1_g000001 Rmu_sc0024967.1_g000001 Rmu_sc0036469.1_g000001 Rmu_ssc0000238.1_g000032
rosa_roxburghii Rroxscaffold_2G00126890 Rroxscaffold_5G00386350 Rroxscaffold_5G00386360 Rroxscaffold_5G00386370 Rroxscaffold_5G00386380 Rroxscaffold_5G00386400 Rroxscaffold_5G00386410 Rroxscaffold_5G00386430 Rroxscaffold_5G00386440 Rroxscaffold_6G00396020
rosa_rugosa Rorug03G0223800 Rorug03G0223800 Rorug03G0223800 Rorug04G0366100 Rorug04G0366200 Rorug04G0366300 Rorug04G0366400 Rorug04G0366500 Rorug04G0366600 Rorug04G0366600 Rorug04G0366700 Rorug04G0366700
rosa_samantha Rh1AG167300 Rh2AG265000 Rh2BG276500 Rh2DG272400 Rh2DG291200 Rh2DG291300 Rh2DG291400 Rh3AG273600 Rh3AG273700 Rh3BG308800 Rh3BG309000 Rh3CG307200 Rh3DG303500 Rh4AG427400 Rh4AG427700 Rh4AG427800 Rh4AG427900 Rh4AG428000 Rh4AG428300 Rh4AG428400 Rh4AG428500 Rh4AG428600 Rh4AG428700 Rh4BG426000 Rh4BG437600 Rh4BG437800 Rh4BG437900 Rh4BG438100 Rh4CG454300 Rh4CG454500 Rh4CG454600 Rh4CG454700 Rh4CG454800 Rh4CG454900 Rh4CG455200 Rh4CG455500 Rh4DG435700 Rh4DG435800 Rh4DG435900 Rh4DG436000 Rh4DG436100 Rh4DG436300 Rh4DG436600
rosa_wichuraiana Rw2G020880 Rw3G024250 Rw4G036590 Rw4G036600 Rw4G036620 Rw4G036630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 542
AarI CACCTGC 1 cut(s) 441
Acc36I ACCTGC 2 cut(s) 441, 804
AccB7I CCANNNNNTGG 1 cut(s) 230
AccII CGCG 2 cut(s) 1406, 1650
AciI CCGC 5 cut(s) 336, 1334, 1369, 1372, 1406
AclWI GGATC 2 cut(s) 216, 1585
AcsI RAATTY 4 cut(s) 85, 536, 595, 1285
AcuI CTGAAG 1 cut(s) 315
AfiI CCNNNNNNNGG 4 cut(s) 230, 1300, 1464, 1516
AflII CTTAAG 2 cut(s) 1075, 1415
AflIII ACRYGT 1 cut(s) 1431
AgeI ACCGGT 2 cut(s) 851, 1552
AjnI CCWGG 2 cut(s) 141, 952
Alw21I GWGCWC 2 cut(s) 405, 1404
Alw26I GTCTC 1 cut(s) 481
AlwI GGATC 2 cut(s) 216, 1585
AlwNI CAGNNNCTG 1 cut(s) 1484
Ama87I CYCGRG 1 cut(s) 1143
AoxI GGCC 1 cut(s) 1503
ApeKI GCWGC 4 cut(s) 789, 1330, 1409, 1631
ApoI RAATTY 4 cut(s) 85, 536, 595, 1285
AsiGI ACCGGT 2 cut(s) 851, 1552
AspLEI GCGC 2 cut(s) 981, 1631
AspS9I GGNCC 2 cut(s) 1455, 1555
AsuII TTCGAA 1 cut(s) 625
AvaI CYCGRG 1 cut(s) 1143
AvaII GGWCC 2 cut(s) 1455, 1555
BarI GAAGNNNNNNTAC 2 cut(s) 966, 998
BbsI GAAGAC 1 cut(s) 1628
Bbv12I GWGCWC 2 cut(s) 405, 1404
BbvI GCAGC 4 cut(s) 776, 1317, 1421, 1618
BccI CCATC 3 cut(s) 1106, 1111, 1202
BciT130I CCWGG 2 cut(s) 143, 954
BcoDI GTCTC 1 cut(s) 481
BfaI CTAG 2 cut(s) 339, 1515
BfoI RGCGCY 2 cut(s) 982, 1632
BfrI CTTAAG 2 cut(s) 1075, 1415
BfuAI ACCTGC 2 cut(s) 441, 804
BisI GCNGC 9 cut(s) 336, 790, 1331, 1334, 1369, 1372, 1407, 1410, 1632
BlsI GCNGC 9 cut(s) 337, 791, 1332, 1335, 1370, 1373, 1408, 1411, 1633
Bme1390I CCNGG 2 cut(s) 143, 954
Bme18I GGWCC 2 cut(s) 1455, 1555
BmeT110I CYCGRG 1 cut(s) 1143
BmgT120I GGNCC 2 cut(s) 1455, 1555
BmiI GGNNCC 3 cut(s) 890, 1367, 1456
BmrFI CCNGG 2 cut(s) 143, 954
BmrI ACTGGG 1 cut(s) 1665
BmsI GCATC 7 cut(s) 119, 238, 304, 508, 625, 1125, 1471
BmuI ACTGGG 1 cut(s) 1665
BpiI GAAGAC 1 cut(s) 1628
BpmI CTGGAG 2 cut(s) 946, 1358
Bpu14I TTCGAA 1 cut(s) 625
BsaBI GATNNNNATC 1 cut(s) 213
BsaJI CCNNGG 4 cut(s) 60, 141, 800, 1057
BsaWI WCCGGW 2 cut(s) 851, 1552
Bsc4I CCNNNNNNNGG 4 cut(s) 230, 1300, 1464, 1516
Bse118I RCCGGY 2 cut(s) 851, 1552
Bse1I ACTGG 6 cut(s) 224, 745, 929, 1510, 1630, 1660
Bse8I GATNNNNATC 1 cut(s) 213
BseBI CCWGG 2 cut(s) 143, 954
BseDI CCNNGG 4 cut(s) 60, 141, 800, 1057
BseGI GGATG 2 cut(s) 1117, 1525
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 4 cut(s) 230, 1300, 1464, 1516
BseMII CTCAG 3 cut(s) 139, 420, 1602
BseNI ACTGG 6 cut(s) 224, 745, 929, 1510, 1630, 1660
BseRI GAGGAG 1 cut(s) 1628
BseXI GCAGC 4 cut(s) 776, 1317, 1421, 1618
Bsh1236I CGCG 2 cut(s) 1406, 1650
Bsh1285I CGRYCG 1 cut(s) 555
BshFI GGCC 1 cut(s) 1505
BshTI ACCGGT 2 cut(s) 851, 1552
BsiEI CGRYCG 1 cut(s) 555
BsiHKAI GWGCWC 2 cut(s) 405, 1404
BsiHKCI CYCGRG 1 cut(s) 1143
BsiSI CCGG 2 cut(s) 852, 1553
BslFI GGGAC 2 cut(s) 751, 1468
BslI CCNNNNNNNGG 4 cut(s) 230, 1300, 1464, 1516
BsmAI GTCTC 1 cut(s) 481
BsmFI GGGAC 2 cut(s) 751, 1468
BsnI GGCC 1 cut(s) 1505
BsoBI CYCGRG 1 cut(s) 1143
Bsp119I TTCGAA 1 cut(s) 625
Bsp1286I GDGCHC 2 cut(s) 405, 1404
Bsp143I GATC 6 cut(s) 13, 208, 303, 552, 680, 1577
Bsp19I CCATGG 2 cut(s) 60, 800
BspACI CCGC 5 cut(s) 336, 1334, 1369, 1372, 1406
BspANI GGCC 1 cut(s) 1505
BspCNI CTCAG 3 cut(s) 138, 421, 1603
BspFNI CGCG 2 cut(s) 1406, 1650
BspLI GGNNCC 3 cut(s) 890, 1367, 1456
BspMI ACCTGC 2 cut(s) 441, 804
BspPI GGATC 2 cut(s) 216, 1585
BspT104I TTCGAA 1 cut(s) 625
BspTI CTTAAG 2 cut(s) 1075, 1415
BsrFI RCCGGY 2 cut(s) 851, 1552
BsrI ACTGG 6 cut(s) 224, 745, 929, 1510, 1630, 1660
BssAI RCCGGY 2 cut(s) 851, 1552
BssECI CCNNGG 4 cut(s) 60, 141, 800, 1057
BssMI GATC 6 cut(s) 13, 208, 303, 552, 680, 1577
BssT1I CCWWGG 3 cut(s) 60, 800, 1057
Bst2UI CCWGG 2 cut(s) 143, 954
Bst6I CTCTTC 1 cut(s) 627
BstAFI CTTAAG 2 cut(s) 1075, 1415
BstBI TTCGAA 1 cut(s) 625
BstC8I GCNNGC 6 cut(s) 319, 323, 327, 807, 1404, 1572
BstDEI CTNAG 5 cut(s) 125, 190, 429, 785, 1611
BstDSI CCRYGG 2 cut(s) 60, 800
BstF5I GGATG 2 cut(s) 1117, 1525
BstFNI CGCG 2 cut(s) 1406, 1650
BstH2I RGCGCY 2 cut(s) 982, 1632
BstHHI GCGC 2 cut(s) 981, 1631
BstKTI GATC 6 cut(s) 16, 211, 306, 555, 683, 1580
BstMAI GTCTC 1 cut(s) 481
BstMBI GATC 6 cut(s) 13, 208, 303, 552, 680, 1577
BstMCI CGRYCG 1 cut(s) 555
BstMWI GCNNNNNNNGC 5 cut(s) 335, 400, 985, 1368, 1571
BstNI CCWGG 2 cut(s) 143, 954
BstSCI CCNGG 2 cut(s) 141, 952
BstUI CGCG 2 cut(s) 1406, 1650
BstV1I GCAGC 4 cut(s) 776, 1317, 1421, 1618
BstV2I GAAGAC 1 cut(s) 1628
BstX2I RGATCY 2 cut(s) 208, 1577
BstYI RGATCY 2 cut(s) 208, 1577
BsuRI GGCC 1 cut(s) 1505
BtgI CCRYGG 2 cut(s) 60, 800
BtsCI GGATG 2 cut(s) 1117, 1525
BtsIMutI CAGTG 3 cut(s) 441, 1320, 1653
BveI ACCTGC 2 cut(s) 441, 804
Cac8I GCNNGC 6 cut(s) 319, 323, 327, 807, 1404, 1572
CaiI CAGNNNCTG 1 cut(s) 1484
CfoI GCGC 2 cut(s) 981, 1631
Cfr10I RCCGGY 2 cut(s) 851, 1552
Cfr13I GGNCC 2 cut(s) 1455, 1555
CsiI ACCWGGT 1 cut(s) 952
CspAI ACCGGT 2 cut(s) 851, 1552
CviAII CATG 6 cut(s) 61, 376, 801, 893, 1228, 1498
DdeI CTNAG 5 cut(s) 125, 190, 429, 785, 1611
DpnI GATC 6 cut(s) 15, 210, 305, 554, 682, 1579
DpnII GATC 6 cut(s) 13, 208, 303, 552, 680, 1577
Eam1104I CTCTTC 1 cut(s) 627
EarI CTCTTC 1 cut(s) 627
Eco130I CCWWGG 3 cut(s) 60, 800, 1057
Eco32I GATATC 1 cut(s) 1318
Eco47I GGWCC 2 cut(s) 1455, 1555
Eco57I CTGAAG 1 cut(s) 315
Eco88I CYCGRG 1 cut(s) 1143
EcoRI GAATTC 1 cut(s) 595
EcoRII CCWGG 2 cut(s) 141, 952
EcoRV GATATC 1 cut(s) 1318
EcoT14I CCWWGG 3 cut(s) 60, 800, 1057
ErhI CCWWGG 3 cut(s) 60, 800, 1057
FaeI CATG 6 cut(s) 64, 379, 804, 896, 1231, 1501
FaqI GGGAC 2 cut(s) 751, 1468
FatI CATG 6 cut(s) 60, 375, 800, 892, 1227, 1497
Fnu4HI GCNGC 9 cut(s) 336, 790, 1331, 1334, 1369, 1372, 1407, 1410, 1632
FokI GGATG 2 cut(s) 1124, 1532
Fsp4HI GCNGC 9 cut(s) 336, 790, 1331, 1334, 1369, 1372, 1407, 1410, 1632
FspBI CTAG 2 cut(s) 339, 1515
GlaI GCGC 2 cut(s) 980, 1630
GluI GCNGC 9 cut(s) 336, 790, 1331, 1334, 1369, 1372, 1407, 1410, 1632
GsuI CTGGAG 2 cut(s) 946, 1358
HaeII RGCGCY 2 cut(s) 982, 1632
HaeIII GGCC 1 cut(s) 1505
HapII CCGG 2 cut(s) 852, 1553
HhaI GCGC 2 cut(s) 981, 1631
Hin1II CATG 6 cut(s) 64, 379, 804, 896, 1231, 1501
Hin6I GCGC 2 cut(s) 979, 1629
HinP1I GCGC 2 cut(s) 979, 1629
HincII GTYRAC 2 cut(s) 675, 1495
HindII GTYRAC 2 cut(s) 675, 1495
HindIII AAGCTT 4 cut(s) 746, 770, 897, 1563
HinfI GANTC 6 cut(s) 65, 220, 241, 431, 820, 1267
HpaI GTTAAC 1 cut(s) 675
HpaII CCGG 2 cut(s) 852, 1553
Hpy166II GTNNAC 4 cut(s) 236, 675, 922, 1495
Hpy188I TCNGA 5 cut(s) 18, 128, 219, 1480, 1612
Hpy188III TCNNGA 6 cut(s) 82, 245, 668, 817, 857, 1145
Hpy8I GTNNAC 4 cut(s) 236, 675, 922, 1495
HpyAV CCTTC 6 cut(s) 88, 373, 931, 992, 1414, 1495
HpyCH4IV ACGT 2 cut(s) 841, 1433
HpyCH4V TGCA 8 cut(s) 493, 532, 792, 1152, 1570, 1584, 1601, 1634
HpyF10VI GCNNNNNNNGC 5 cut(s) 335, 400, 985, 1368, 1571
HpyF3I CTNAG 5 cut(s) 125, 190, 429, 785, 1611
HpySE526I ACGT 2 cut(s) 841, 1433
Hsp92II CATG 6 cut(s) 64, 379, 804, 896, 1231, 1501
HspAI GCGC 2 cut(s) 979, 1629
KspAI GTTAAC 1 cut(s) 675
Kzo9I GATC 6 cut(s) 13, 208, 303, 552, 680, 1577
LmnI GCTCC 1 cut(s) 1365
Lsp1109I GCAGC 4 cut(s) 776, 1317, 1421, 1618
LweI GCATC 7 cut(s) 119, 238, 304, 508, 625, 1125, 1471
MabI ACCWGGT 1 cut(s) 952
MaeI CTAG 2 cut(s) 339, 1515
MaeII ACGT 2 cut(s) 841, 1433
MaeIII GTNAC 3 cut(s) 457, 946, 1427
MalI GATC 6 cut(s) 15, 210, 305, 554, 682, 1579
MboI GATC 6 cut(s) 13, 208, 303, 552, 680, 1577
MboII GAAGA 8 cut(s) 614, 639, 697, 1076, 1211, 1219, 1325, 1633
MflI RGATCY 2 cut(s) 208, 1577
MhlI GDGCHC 2 cut(s) 405, 1404
MlyI GAGTC 3 cut(s) 59, 229, 440
MseI TTAA 5 cut(s) 213, 512, 674, 1076, 1416
MspA1I CMGCKG 1 cut(s) 1336
MspCI CTTAAG 2 cut(s) 1075, 1415
MspI CCGG 2 cut(s) 852, 1553
MspR9I CCNGG 2 cut(s) 143, 954
MvaI CCWGG 2 cut(s) 143, 954
MvnI CGCG 2 cut(s) 1406, 1650
MwoI GCNNNNNNNGC 5 cut(s) 335, 400, 985, 1368, 1571
NcoI CCATGG 2 cut(s) 60, 800
NdeII GATC 6 cut(s) 13, 208, 303, 552, 680, 1577
NlaIII CATG 6 cut(s) 64, 379, 804, 896, 1231, 1501
NlaIV GGNNCC 3 cut(s) 890, 1367, 1456
NspV TTCGAA 1 cut(s) 625
PaqCI CACCTGC 1 cut(s) 441
PfeI GAWTC 3 cut(s) 241, 820, 1267
PflMI CCANNNNNTGG 1 cut(s) 230
PinAI ACCGGT 2 cut(s) 851, 1552
PkrI GCNGC 9 cut(s) 337, 791, 1332, 1335, 1370, 1373, 1408, 1411, 1633
Ple19I CGATCG 1 cut(s) 555
PleI GAGTC 3 cut(s) 59, 228, 439
PpsI GAGTC 3 cut(s) 59, 228, 439
PsiI TTATAA 1 cut(s) 542
Psp6I CCWGG 2 cut(s) 141, 952
PspGI CCWGG 2 cut(s) 141, 952
PspN4I GGNNCC 3 cut(s) 890, 1367, 1456
PspPI GGNCC 2 cut(s) 1455, 1555
PstNI CAGNNNCTG 1 cut(s) 1484
PsuI RGATCY 2 cut(s) 208, 1577
PvuI CGATCG 1 cut(s) 555
SaqAI TTAA 5 cut(s) 213, 512, 674, 1076, 1416
SatI GCNGC 9 cut(s) 336, 790, 1331, 1334, 1369, 1372, 1407, 1410, 1632
Sau3AI GATC 6 cut(s) 13, 208, 303, 552, 680, 1577
Sau96I GGNCC 2 cut(s) 1455, 1555
SchI GAGTC 3 cut(s) 59, 229, 440
ScrFI CCNGG 2 cut(s) 143, 954
SduI GDGCHC 2 cut(s) 405, 1404
SexAI ACCWGGT 1 cut(s) 952
SfaNI GCATC 7 cut(s) 119, 238, 304, 508, 625, 1125, 1471
SfuI TTCGAA 1 cut(s) 625
SinI GGWCC 2 cut(s) 1455, 1555
SmlI CTYRAG 2 cut(s) 1075, 1415
SmoI CTYRAG 2 cut(s) 1075, 1415
SsiI CCGC 5 cut(s) 336, 1334, 1369, 1372, 1406
SspI AATATT 1 cut(s) 835
SspMI CTAG 2 cut(s) 339, 1515
StyD4I CCNGG 2 cut(s) 141, 952
StyI CCWWGG 3 cut(s) 60, 800, 1057
TaiI ACGT 2 cut(s) 844, 1436
TaqI TCGA 6 cut(s) 551, 555, 625, 683, 1099, 1197
TauI GCSGC 5 cut(s) 338, 1336, 1371, 1374, 1409
TfiI GAWTC 3 cut(s) 241, 820, 1267
Tru1I TTAA 5 cut(s) 213, 512, 674, 1076, 1416
Tru9I TTAA 5 cut(s) 213, 512, 674, 1076, 1416
TscAI CASTG 3 cut(s) 441, 1327, 1660
TseI GCWGC 4 cut(s) 789, 1330, 1409, 1631
TspDTI ATGAA 5 cut(s) 392, 588, 802, 909, 1514
TspGWI ACGGA 2 cut(s) 298, 1283
TspRI CASTG 3 cut(s) 441, 1327, 1660
Van91I CCANNNNNTGG 1 cut(s) 230
Vha464I CTTAAG 2 cut(s) 1075, 1415
VpaK11BI GGWCC 2 cut(s) 1455, 1555
XapI RAATTY 4 cut(s) 85, 536, 595, 1285
XspI CTAG 2 cut(s) 339, 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.