TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2868 |
| Acc16I | TGCGCA | 1 cut(s) | 1405 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1982 |
| AccII | CGCG | 1 cut(s) | 3374 |
| AciI | CCGC | 5 cut(s) | 1034, 1098, 2283, 2474, 3374 |
| AclWI | GGATC | 3 cut(s) | 583, 1431, 3556 |
| AcoI | YGGCCR | 2 cut(s) | 2280, 3474 |
| AcuI | CTGAAG | 1 cut(s) | 728 |
| AcyI | GRCGYC | 1 cut(s) | 3624 |
| AdeI | CACNNNGTG | 1 cut(s) | 939 |
| AfaI | GTAC | 7 cut(s) | 229, 348, 555, 563, 617, 819, 2717 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 87, 850, 1348, 1615, 1982, 3487 |
| AflII | CTTAAG | 3 cut(s) | 1052, 2458, 3383 |
| AflIII | ACRYGT | 1 cut(s) | 2491 |
| AjnI | CCWGG | 4 cut(s) | 86, 546, 664, 2088 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 128, 160 |
| AleI | CACNNNNGTG | 2 cut(s) | 1875, 2490 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3415, 3447 |
| Alw21I | GWGCWC | 4 cut(s) | 472, 777, 1503, 3372 |
| Alw26I | GTCTC | 7 cut(s) | 733, 1265, 1760, 1861, 2257, 2385, 2428 |
| AlwI | GGATC | 3 cut(s) | 583, 1431, 3556 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3455 |
| Ama87I | CYCGRG | 2 cut(s) | 2687, 3096 |
| AoxI | GGCC | 6 cut(s) | 311, 930, 991, 1700, 2280, 3474 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 1733, 1765, 2386, 2418, 2810, 2842, 3415, 3447 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 204 |
| AspLEI | GCGC | 3 cut(s) | 1406, 2934, 3565 |
| AspS9I | GGNCC | 4 cut(s) | 454, 1339, 1701, 3423 |
| AsuC2I | CCSGG | 1 cut(s) | 3628 |
| AsuHPI | GGTGA | 6 cut(s) | 77, 616, 968, 1178, 1595, 1949 |
| AsuII | TTCGAA | 1 cut(s) | 2578 |
| AvaI | CYCGRG | 2 cut(s) | 2687, 3096 |
| AvaII | GGWCC | 3 cut(s) | 454, 1339, 3423 |
| AxyI | CCTNAGG | 1 cut(s) | 876 |
| BalI | TGGCCA | 1 cut(s) | 3476 |
| BanII | GRGCYC | 1 cut(s) | 777 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 330, 362, 2919, 2951 |
| BauI | CACGAG | 2 cut(s) | 891, 1763 |
| BbsI | GAAGAC | 1 cut(s) | 3599 |
| Bbv12I | GWGCWC | 4 cut(s) | 472, 777, 1503, 3372 |
| BccI | CCATC | 8 cut(s) | 230, 1692, 2671, 3059, 3064, 3170, 3466, 3529 |
| BceAI | ACGGC | 2 cut(s) | 87, 3286 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 22, 56 |
| BciT130I | CCWGG | 4 cut(s) | 88, 548, 666, 2090 |
| BcnI | CCSGG | 1 cut(s) | 3628 |
| BcoDI | GTCTC | 7 cut(s) | 733, 1265, 1760, 1861, 2257, 2385, 2428 |
| BfaI | CTAG | 7 cut(s) | 867, 1104, 1143, 1199, 1506, 2286, 3486 |
| BfmI | CTRYAG | 3 cut(s) | 1080, 1221, 1560 |
| BfoI | RGCGCY | 1 cut(s) | 2935 |
| BfrI | CTTAAG | 3 cut(s) | 1052, 2458, 3383 |
| BlpI | GCTNAGC | 3 cut(s) | 438, 1008, 2265 |
| BmcAI | AGTACT | 1 cut(s) | 348 |
| Bme1390I | CCNGG | 5 cut(s) | 88, 548, 666, 2090, 3628 |
| Bme18I | GGWCC | 3 cut(s) | 454, 1339, 3423 |
| BmeT110I | CYCGRG | 2 cut(s) | 2687, 3096 |
| BmgT120I | GGNCC | 4 cut(s) | 454, 1339, 1701, 3423 |
| BmiI | GGNNCC | 3 cut(s) | 107, 3338, 3424 |
| BmrFI | CCNGG | 5 cut(s) | 88, 548, 666, 2090, 3628 |
| BpiI | GAAGAC | 1 cut(s) | 3599 |
| BpmI | CTGGAG | 3 cut(s) | 327, 381, 2899 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1236 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 438, 1008, 2265 |
| Bpu14I | TTCGAA | 1 cut(s) | 2578 |
| BpuEI | CTTGAG | 2 cut(s) | 1415, 1574 |
| BpuMI | CCSGG | 1 cut(s) | 3628 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1920 |
| BsaHI | GRCGYC | 1 cut(s) | 3624 |
| BsaI | GGTCTC | 2 cut(s) | 2257, 2428 |
| BsaJI | CCNNGG | 7 cut(s) | 87, 1276, 2007, 2088, 2753, 3010, 3627 |
| BsaWI | WCCGGW | 1 cut(s) | 62 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 87, 850, 1348, 1615, 1982, 3487 |
| Bse21I | CCTNAGG | 1 cut(s) | 876 |
| Bse3DI | GCAATG | 4 cut(s) | 81, 647, 861, 2838 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1920 |
| BseBI | CCWGG | 4 cut(s) | 88, 548, 666, 2090 |
| BseDI | CCNNGG | 7 cut(s) | 87, 1276, 2007, 2088, 2753, 3010, 3627 |
| BseGI | GGATG | 7 cut(s) | 556, 1327, 1703, 1921, 3069, 3070, 3496 |
| BseJI | GATNNNNATC | 1 cut(s) | 1920 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 87, 850, 1348, 1615, 1982, 3487 |
| BseMI | GCAATG | 4 cut(s) | 81, 647, 861, 2838 |
| BseRI | GAGGAG | 3 cut(s) | 1742, 3349, 3599 |
| BseX3I | CGGCCG | 1 cut(s) | 2280 |
| BseYI | CCCAGC | 3 cut(s) | 1181, 2363, 3271 |
| BsgI | GTGCAG | 2 cut(s) | 869, 2468 |
| Bsh1236I | CGCG | 1 cut(s) | 3374 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2283 |
| BshFI | GGCC | 6 cut(s) | 313, 932, 993, 1702, 2282, 3476 |
| BsiEI | CGRYCG | 1 cut(s) | 2283 |
| BsiHKAI | GWGCWC | 4 cut(s) | 472, 777, 1503, 3372 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2687, 3096 |
| BsiSI | CCGG | 2 cut(s) | 63, 3627 |
| BsiWI | CGTACG | 1 cut(s) | 227 |
| BslFI | GGGAC | 3 cut(s) | 2704, 3436, 3644 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 87, 850, 1348, 1615, 1982, 3487 |
| BsmAI | GTCTC | 7 cut(s) | 733, 1265, 1760, 1861, 2257, 2385, 2428 |
| BsmFI | GGGAC | 3 cut(s) | 2704, 3436, 3644 |
| BsmI | GAATGC | 3 cut(s) | 533, 1020, 1861 |
| BsnI | GGCC | 6 cut(s) | 313, 932, 993, 1702, 2282, 3476 |
| Bso31I | GGTCTC | 2 cut(s) | 2257, 2428 |
| BsoBI | CYCGRG | 2 cut(s) | 2687, 3096 |
| Bsp119I | TTCGAA | 1 cut(s) | 2578 |
| Bsp1286I | GDGCHC | 4 cut(s) | 472, 777, 1503, 3372 |
| Bsp1407I | TGTACA | 3 cut(s) | 561, 817, 2715 |
| Bsp143I | GATC | 3 cut(s) | 575, 1436, 3548 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 438, 1008, 2265 |
| Bsp19I | CCATGG | 1 cut(s) | 2753 |
| BspACI | CCGC | 5 cut(s) | 1034, 1098, 2283, 2474, 3374 |
| BspANI | GGCC | 6 cut(s) | 313, 932, 993, 1702, 2282, 3476 |
| BspFNI | CGCG | 1 cut(s) | 3374 |
| BspHI | TCATGA | 2 cut(s) | 910, 2467 |
| BspLI | GGNNCC | 3 cut(s) | 107, 3338, 3424 |
| BspMAI | CTGCAG | 2 cut(s) | 1225, 1564 |
| BspPI | GGATC | 3 cut(s) | 583, 1431, 3556 |
| BspQI | GCTCTTC | 1 cut(s) | 765 |
| BspT104I | TTCGAA | 1 cut(s) | 2578 |
| BspTI | CTTAAG | 3 cut(s) | 1052, 2458, 3383 |
| BspTNI | GGTCTC | 2 cut(s) | 2257, 2428 |
| BsrDI | GCAATG | 4 cut(s) | 81, 647, 861, 2838 |
| BsrGI | TGTACA | 3 cut(s) | 561, 817, 2715 |
| BssECI | CCNNGG | 7 cut(s) | 87, 1276, 2007, 2088, 2753, 3010, 3627 |
| BssMI | GATC | 3 cut(s) | 575, 1436, 3548 |
| BssNI | GRCGYC | 1 cut(s) | 3624 |
| BssSI | CACGAG | 2 cut(s) | 891, 1763 |
| BssT1I | CCWWGG | 3 cut(s) | 1276, 2753, 3010 |
| Bst2BI | CACGAG | 2 cut(s) | 891, 1763 |
| Bst2UI | CCWGG | 4 cut(s) | 88, 548, 666, 2090 |
| Bst4CI | ACNGT | 3 cut(s) | 1267, 1343, 2715 |
| Bst6I | CTCTTC | 4 cut(s) | 39, 765, 1527, 2580 |
| BstACI | GRCGYC | 1 cut(s) | 3624 |
| BstAFI | CTTAAG | 3 cut(s) | 1052, 2458, 3383 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 856, 1568 |
| BstAUI | TGTACA | 3 cut(s) | 561, 817, 2715 |
| BstBI | TTCGAA | 1 cut(s) | 2578 |
| BstDSI | CCRYGG | 2 cut(s) | 2007, 2753 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 848, 1613 |
| BstF5I | GGATG | 7 cut(s) | 556, 1327, 1703, 1921, 3069, 3070, 3496 |
| BstFNI | CGCG | 1 cut(s) | 3374 |
| BstH2I | RGCGCY | 1 cut(s) | 2935 |
| BstHHI | GCGC | 3 cut(s) | 1406, 2934, 3565 |
| BstKTI | GATC | 3 cut(s) | 578, 1439, 3551 |
| BstMAI | GTCTC | 7 cut(s) | 733, 1265, 1760, 1861, 2257, 2385, 2428 |
| BstMBI | GATC | 3 cut(s) | 575, 1436, 3548 |
| BstMCI | CGRYCG | 1 cut(s) | 2283 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 781, 856, 860, 1097, 1568, 1708, 2282, 3542, 3569 |
| BstNI | CCWGG | 4 cut(s) | 88, 548, 666, 2090 |
| BstNSI | RCATGY | 1 cut(s) | 506 |
| BstSCI | CCNGG | 5 cut(s) | 86, 546, 664, 2088, 3626 |
| BstSFI | CTRYAG | 3 cut(s) | 1080, 1221, 1560 |
| BstUI | CGCG | 1 cut(s) | 3374 |
| BstV2I | GAAGAC | 1 cut(s) | 3599 |
| BstX2I | RGATCY | 2 cut(s) | 1436, 3548 |
| BstYI | RGATCY | 2 cut(s) | 1436, 3548 |
| BstZI | CGGCCG | 1 cut(s) | 2280 |
| Bsu36I | CCTNAGG | 1 cut(s) | 876 |
| BsuRI | GGCC | 6 cut(s) | 313, 932, 993, 1702, 2282, 3476 |
| BtgI | CCRYGG | 2 cut(s) | 2007, 2753 |
| BtgZI | GCGATG | 1 cut(s) | 564 |
| BtsCI | GGATG | 7 cut(s) | 556, 1327, 1703, 1921, 3069, 3070, 3496 |
| BtsI | GCAGTG | 1 cut(s) | 1640 |
| BtsIMutI | CAGTG | 6 cut(s) | 679, 1263, 1640, 1794, 2785, 3288 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3455 |
| CciI | TCATGA | 2 cut(s) | 910, 2467 |
| CfoI | GCGC | 3 cut(s) | 1406, 2934, 3565 |
| Cfr13I | GGNCC | 4 cut(s) | 454, 1339, 1701, 3423 |
| CseI | GACGC | 1 cut(s) | 3632 |
| Csp6I | GTAC | 7 cut(s) | 228, 347, 554, 562, 616, 818, 2716 |
| CviQI | GTAC | 7 cut(s) | 228, 347, 554, 562, 616, 818, 2716 |
| DpnI | GATC | 3 cut(s) | 577, 1438, 3550 |
| DpnII | GATC | 3 cut(s) | 575, 1436, 3548 |
| DraIII | CACNNNGTG | 1 cut(s) | 939 |
| EaeI | YGGCCR | 2 cut(s) | 2280, 3474 |
| EagI | CGGCCG | 1 cut(s) | 2280 |
| Eam1104I | CTCTTC | 4 cut(s) | 39, 765, 1527, 2580 |
| EarI | CTCTTC | 4 cut(s) | 39, 765, 1527, 2580 |
| Ecl136II | GAGCTC | 1 cut(s) | 775 |
| EclXI | CGGCCG | 1 cut(s) | 2280 |
| Eco130I | CCWWGG | 3 cut(s) | 1276, 2753, 3010 |
| Eco147I | AGGCCT | 1 cut(s) | 313 |
| Eco24I | GRGCYC | 1 cut(s) | 777 |
| Eco31I | GGTCTC | 2 cut(s) | 2257, 2428 |
| Eco47I | GGWCC | 3 cut(s) | 454, 1339, 3423 |
| Eco52I | CGGCCG | 1 cut(s) | 2280 |
| Eco53kI | GAGCTC | 1 cut(s) | 775 |
| Eco57I | CTGAAG | 1 cut(s) | 728 |
| Eco81I | CCTNAGG | 1 cut(s) | 876 |
| Eco88I | CYCGRG | 2 cut(s) | 2687, 3096 |
| EcoICRI | GAGCTC | 1 cut(s) | 775 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 848, 1613 |
| EcoRI | GAATTC | 2 cut(s) | 542, 2548 |
| EcoRII | CCWGG | 4 cut(s) | 86, 546, 664, 2088 |
| EcoT14I | CCWWGG | 3 cut(s) | 1276, 2753, 3010 |
| EcoT38I | GRGCYC | 1 cut(s) | 777 |
| ErhI | CCWWGG | 3 cut(s) | 1276, 2753, 3010 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 621, 653 |
| FaqI | GGGAC | 3 cut(s) | 2704, 3436, 3644 |
| FauNDI | CATATG | 1 cut(s) | 1684 |
| FokI | GGATG | 7 cut(s) | 563, 1314, 1710, 1928, 3056, 3077, 3503 |
| FriOI | GRGCYC | 1 cut(s) | 777 |
| FspAI | RTGCGCAY | 1 cut(s) | 1405 |
| FspBI | CTAG | 7 cut(s) | 867, 1104, 1143, 1199, 1506, 2286, 3486 |
| FspI | TGCGCA | 1 cut(s) | 1405 |
| GlaI | GCGC | 3 cut(s) | 1405, 2933, 3564 |
| GsaI | CCCAGC | 3 cut(s) | 1185, 2367, 3275 |
| GsuI | CTGGAG | 3 cut(s) | 327, 381, 2899 |
| HaeII | RGCGCY | 1 cut(s) | 2935 |
| HaeIII | GGCC | 6 cut(s) | 313, 932, 993, 1702, 2282, 3476 |
| HapII | CCGG | 2 cut(s) | 63, 3627 |
| HgaI | GACGC | 1 cut(s) | 3632 |
| HhaI | GCGC | 3 cut(s) | 1406, 2934, 3565 |
| Hin1I | GRCGYC | 1 cut(s) | 3624 |
| Hin6I | GCGC | 3 cut(s) | 1404, 2932, 3563 |
| HinP1I | GCGC | 3 cut(s) | 1404, 2932, 3563 |
| HincII | GTYRAC | 2 cut(s) | 1804, 3466 |
| HindII | GTYRAC | 2 cut(s) | 1804, 3466 |
| HindIII | AAGCTT | 7 cut(s) | 1774, 2001, 2669, 2699, 2723, 2850, 3534 |
| HpaII | CCGG | 2 cut(s) | 63, 3627 |
| HphI | GGTGA | 6 cut(s) | 77, 616, 968, 1178, 1595, 1949 |
| Hpy166II | GTNNAC | 6 cut(s) | 1169, 1804, 2628, 2875, 3466, 3518 |
| Hpy8I | GTNNAC | 6 cut(s) | 1169, 1804, 2628, 2875, 3466, 3518 |
| Hpy99I | CGWCG | 2 cut(s) | 2394, 3307 |
| HpyCH4III | ACNGT | 3 cut(s) | 1267, 1343, 2715 |
| HpyCH4IV | ACGT | 3 cut(s) | 2491, 3031, 3158 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 781, 856, 860, 1097, 1568, 1708, 2282, 3542, 3569 |
| HpySE526I | ACGT | 3 cut(s) | 2491, 3031, 3158 |
| Hsp92I | GRCGYC | 1 cut(s) | 3624 |
| HspAI | GCGC | 3 cut(s) | 1404, 2932, 3563 |
| Kzo9I | GATC | 3 cut(s) | 575, 1436, 3548 |
| LguI | GCTCTTC | 1 cut(s) | 765 |
| LmnI | GCTCC | 7 cut(s) | 346, 434, 625, 1498, 1729, 2476, 3336 |
| MaeI | CTAG | 7 cut(s) | 867, 1104, 1143, 1199, 1506, 2286, 3486 |
| MaeII | ACGT | 3 cut(s) | 2491, 3031, 3158 |
| MaeIII | GTNAC | 6 cut(s) | 727, 1271, 1826, 2494, 3286, 3620 |
| MalI | GATC | 3 cut(s) | 577, 1438, 3550 |
| MboI | GATC | 3 cut(s) | 575, 1436, 3548 |
| MfeI | CAATTG | 1 cut(s) | 3427 |
| MflI | RGATCY | 2 cut(s) | 1436, 3548 |
| MhlI | GDGCHC | 4 cut(s) | 472, 777, 1503, 3372 |
| MlsI | TGGCCA | 1 cut(s) | 3476 |
| MluNI | TGGCCA | 1 cut(s) | 3476 |
| MlyI | GAGTC | 4 cut(s) | 208, 635, 2176, 2387 |
| MmeI | TCCRAC | 4 cut(s) | 126, 1509, 1861, 3285 |
| Mox20I | TGGCCA | 1 cut(s) | 3476 |
| MroXI | GAANNNNTTC | 1 cut(s) | 204 |
| MscI | TGGCCA | 1 cut(s) | 3476 |
| MseI | TTAA | 9 cut(s) | 21, 308, 900, 996, 1053, 1814, 2459, 2703, 3384 |
| MslI | CAYNNNNRTG | 4 cut(s) | 921, 1854, 1875, 2490 |
| Msp20I | TGGCCA | 1 cut(s) | 3476 |
| MspA1I | CMGCKG | 2 cut(s) | 3298, 3545 |
| MspCI | CTTAAG | 3 cut(s) | 1052, 2458, 3383 |
| MspI | CCGG | 2 cut(s) | 63, 3627 |
| MspR9I | CCNGG | 5 cut(s) | 88, 548, 666, 2090, 3628 |
| MunI | CAATTG | 1 cut(s) | 3427 |
| Mva1269I | GAATGC | 3 cut(s) | 533, 1020, 1861 |
| MvaI | CCWGG | 4 cut(s) | 88, 548, 666, 2090 |
| MvnI | CGCG | 1 cut(s) | 3374 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 781, 856, 860, 1097, 1568, 1708, 2282, 3542, 3569 |
| NciI | CCSGG | 1 cut(s) | 3628 |
| NcoI | CCATGG | 1 cut(s) | 2753 |
| NdeI | CATATG | 1 cut(s) | 1684 |
| NdeII | GATC | 3 cut(s) | 575, 1436, 3548 |
| NlaIV | GGNNCC | 3 cut(s) | 107, 3338, 3424 |
| NmuCI | GTSAC | 4 cut(s) | 1271, 1826, 3286, 3620 |
| NsbI | TGCGCA | 1 cut(s) | 1405 |
| NspI | RCATGY | 1 cut(s) | 506 |
| NspV | TTCGAA | 1 cut(s) | 2578 |
| OliI | CACNNNNGTG | 2 cut(s) | 1875, 2490 |
| PaeI | GCATGC | 1 cut(s) | 506 |
| PagI | TCATGA | 2 cut(s) | 910, 2467 |
| PceI | AGGCCT | 1 cut(s) | 313 |
| PciSI | GCTCTTC | 1 cut(s) | 765 |
| PctI | GAATGC | 3 cut(s) | 533, 1020, 1861 |
| PdmI | GAANNNNTTC | 1 cut(s) | 204 |
| Pfl23II | CGTACG | 1 cut(s) | 227 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1982 |
| PfoI | TCCNGGA | 1 cut(s) | 546 |
| PleI | GAGTC | 4 cut(s) | 208, 635, 2175, 2386 |
| PpsI | GAGTC | 4 cut(s) | 208, 635, 2175, 2386 |
| PsiI | TTATAA | 1 cut(s) | 2868 |
| Psp124BI | GAGCTC | 1 cut(s) | 777 |
| Psp6I | CCWGG | 4 cut(s) | 86, 546, 664, 2088 |
| PspFI | CCCAGC | 3 cut(s) | 1181, 2363, 3271 |
| PspGI | CCWGG | 4 cut(s) | 86, 546, 664, 2088 |
| PspLI | CGTACG | 1 cut(s) | 227 |
| PspN4I | GGNNCC | 3 cut(s) | 107, 3338, 3424 |
| PspPI | GGNCC | 4 cut(s) | 454, 1339, 1701, 3423 |
| PstI | CTGCAG | 2 cut(s) | 1225, 1564 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3455 |
| PsuI | RGATCY | 2 cut(s) | 1436, 3548 |
| PvuII | CAGCTG | 2 cut(s) | 3298, 3545 |
| RsaI | GTAC | 7 cut(s) | 229, 348, 555, 563, 617, 819, 2717 |
| RsaNI | GTAC | 7 cut(s) | 228, 347, 554, 562, 616, 818, 2716 |
| RseI | CAYNNNNRTG | 4 cut(s) | 921, 1854, 1875, 2490 |
| SacI | GAGCTC | 1 cut(s) | 777 |
| SapI | GCTCTTC | 1 cut(s) | 765 |
| SaqAI | TTAA | 9 cut(s) | 21, 308, 900, 996, 1053, 1814, 2459, 2703, 3384 |
| Sau3AI | GATC | 3 cut(s) | 575, 1436, 3548 |
| Sau96I | GGNCC | 4 cut(s) | 454, 1339, 1701, 3423 |
| ScaI | AGTACT | 1 cut(s) | 348 |
| SchI | GAGTC | 4 cut(s) | 208, 635, 2176, 2387 |
| ScrFI | CCNGG | 5 cut(s) | 88, 548, 666, 2090, 3628 |
| SduI | GDGCHC | 4 cut(s) | 472, 777, 1503, 3372 |
| SfcI | CTRYAG | 3 cut(s) | 1080, 1221, 1560 |
| SfuI | TTCGAA | 1 cut(s) | 2578 |
| SinI | GGWCC | 3 cut(s) | 454, 1339, 3423 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 921, 1854, 1875, 2490 |
| SmlI | CTYRAG | 5 cut(s) | 1052, 1394, 1553, 2458, 3383 |
| SmoI | CTYRAG | 5 cut(s) | 1052, 1394, 1553, 2458, 3383 |
| SphI | GCATGC | 1 cut(s) | 506 |
| SseBI | AGGCCT | 1 cut(s) | 313 |
| SsiI | CCGC | 5 cut(s) | 1034, 1098, 2283, 2474, 3374 |
| SspI | AATATT | 2 cut(s) | 1911, 2228 |
| SspMI | CTAG | 7 cut(s) | 867, 1104, 1143, 1199, 1506, 2286, 3486 |
| SstI | GAGCTC | 1 cut(s) | 777 |
| StuI | AGGCCT | 1 cut(s) | 313 |
| StyD4I | CCNGG | 5 cut(s) | 86, 546, 664, 2088, 3626 |
| StyI | CCWWGG | 3 cut(s) | 1276, 2753, 3010 |
| TaaI | ACNGT | 3 cut(s) | 1267, 1343, 2715 |
| TaiI | ACGT | 3 cut(s) | 2494, 3034, 3161 |
| TatI | WGTACW | 6 cut(s) | 346, 553, 561, 615, 817, 2715 |
| TauI | GCSGC | 2 cut(s) | 2285, 3377 |
| Tru1I | TTAA | 9 cut(s) | 21, 308, 900, 996, 1053, 1814, 2459, 2703, 3384 |
| Tru9I | TTAA | 9 cut(s) | 21, 308, 900, 996, 1053, 1814, 2459, 2703, 3384 |
| TscAI | CASTG | 6 cut(s) | 679, 1270, 1647, 1801, 2785, 3295 |
| TseFI | GTSAC | 4 cut(s) | 1271, 1826, 3286, 3620 |
| Tsp45I | GTSAC | 4 cut(s) | 1271, 1826, 3286, 3620 |
| TspGWI | ACGGA | 5 cut(s) | 215, 446, 1996, 2245, 2378 |
| TspRI | CASTG | 6 cut(s) | 679, 1270, 1647, 1801, 2785, 3295 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1982 |
| Vha464I | CTTAAG | 3 cut(s) | 1052, 2458, 3383 |
| VpaK11BI | GGWCC | 3 cut(s) | 454, 1339, 3423 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 848, 1613 |
| XceI | RCATGY | 1 cut(s) | 506 |
| XmnI | GAANNNNTTC | 1 cut(s) | 204 |
| XspI | CTAG | 7 cut(s) | 867, 1104, 1143, 1199, 1506, 2286, 3486 |
| ZrmI | AGTACT | 1 cut(s) | 348 |