TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 20 |
| Acc36I | ACCTGC | 1 cut(s) | 282 |
| AciI | CCGC | 5 cut(s) | 812, 847, 884, 1148, 1247 |
| AcoI | YGGCCR | 1 cut(s) | 981 |
| AcsI | RAATTY | 4 cut(s) | 14, 73, 763, 1012 |
| AcyI | GRCGYC | 1 cut(s) | 1250 |
| AfaI | GTAC | 1 cut(s) | 1170 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 778, 942, 994 |
| AflII | CTTAAG | 2 cut(s) | 553, 893 |
| AgeI | ACCGGT | 1 cut(s) | 329 |
| AgsI | TTSAA | 4 cut(s) | 120, 317, 637, 656 |
| AjnI | CCWGG | 2 cut(s) | 430, 1181 |
| AluBI | AGCT | 8 cut(s) | 226, 238, 250, 377, 383, 552, 890, 1043 |
| AluI | AGCT | 8 cut(s) | 226, 238, 250, 377, 383, 552, 890, 1043 |
| Alw26I | GTCTC | 2 cut(s) | 1140, 1149 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 962 |
| Ama87I | CYCGRG | 2 cut(s) | 212, 621 |
| AoxI | GGCC | 1 cut(s) | 981 |
| ApeKI | GCWGC | 4 cut(s) | 267, 808, 887, 1064 |
| ApoI | RAATTY | 4 cut(s) | 14, 73, 763, 1012 |
| AsiGI | ACCGGT | 1 cut(s) | 329 |
| AspLEI | GCGC | 2 cut(s) | 459, 1308 |
| AspS9I | GGNCC | 1 cut(s) | 933 |
| AsuHPI | GGTGA | 1 cut(s) | 1121 |
| AsuII | TTCGAA | 1 cut(s) | 103 |
| AvaI | CYCGRG | 2 cut(s) | 212, 621 |
| AvaII | GGWCC | 1 cut(s) | 933 |
| BalI | TGGCCA | 1 cut(s) | 983 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 97, 129, 444, 476 |
| BbvI | GCAGC | 4 cut(s) | 254, 795, 899, 1051 |
| BccI | CCATC | 4 cut(s) | 584, 589, 973, 1295 |
| BciT130I | CCWGG | 2 cut(s) | 432, 1183 |
| BcoDI | GTCTC | 2 cut(s) | 1140, 1149 |
| BfaI | CTAG | 1 cut(s) | 993 |
| BfmI | CTRYAG | 2 cut(s) | 1104, 1319 |
| BfoI | RGCGCY | 1 cut(s) | 460 |
| BfrI | CTTAAG | 2 cut(s) | 553, 893 |
| BfuAI | ACCTGC | 1 cut(s) | 282 |
| BisI | GCNGC | 8 cut(s) | 268, 809, 812, 847, 885, 888, 1065, 1248 |
| BlsI | GCNGC | 8 cut(s) | 269, 810, 813, 848, 886, 889, 1066, 1249 |
| Bme1390I | CCNGG | 2 cut(s) | 432, 1183 |
| Bme18I | GGWCC | 1 cut(s) | 933 |
| BmeT110I | CYCGRG | 2 cut(s) | 212, 621 |
| BmgT120I | GGNCC | 1 cut(s) | 933 |
| BmiI | GGNNCC | 3 cut(s) | 368, 934, 1258 |
| BmrFI | CCNGG | 2 cut(s) | 432, 1183 |
| BmrI | ACTGGG | 1 cut(s) | 1098 |
| BmsI | GCATC | 3 cut(s) | 603, 949, 1234 |
| BmuI | ACTGGG | 1 cut(s) | 1098 |
| BpmI | CTGGAG | 1 cut(s) | 424 |
| Bpu14I | TTCGAA | 1 cut(s) | 103 |
| BsaAI | YACGTR | 1 cut(s) | 424 |
| BsaHI | GRCGYC | 1 cut(s) | 1250 |
| BsaJI | CCNNGG | 3 cut(s) | 278, 535, 1182 |
| BsaWI | WCCGGW | 2 cut(s) | 329, 1268 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 778, 942, 994 |
| Bse118I | RCCGGY | 1 cut(s) | 329 |
| Bse1I | ACTGG | 6 cut(s) | 223, 407, 988, 1031, 1063, 1093 |
| BseBI | CCWGG | 2 cut(s) | 432, 1183 |
| BseDI | CCNNGG | 3 cut(s) | 278, 535, 1182 |
| BseGI | GGATG | 3 cut(s) | 595, 1003, 1228 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 778, 942, 994 |
| BseNI | ACTGG | 6 cut(s) | 223, 407, 988, 1031, 1063, 1093 |
| BseRI | GAGGAG | 1 cut(s) | 1220 |
| BseXI | GCAGC | 4 cut(s) | 254, 795, 899, 1051 |
| Bsh1285I | CGRYCG | 1 cut(s) | 33 |
| BshFI | GGCC | 1 cut(s) | 983 |
| BshTI | ACCGGT | 1 cut(s) | 329 |
| BsiEI | CGRYCG | 1 cut(s) | 33 |
| BsiHKCI | CYCGRG | 2 cut(s) | 212, 621 |
| BsiSI | CCGG | 4 cut(s) | 330, 815, 850, 1269 |
| BslFI | GGGAC | 3 cut(s) | 229, 946, 1199 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 778, 942, 994 |
| BsmAI | GTCTC | 2 cut(s) | 1140, 1149 |
| BsmFI | GGGAC | 3 cut(s) | 229, 946, 1199 |
| BsnI | GGCC | 1 cut(s) | 983 |
| BsoBI | CYCGRG | 2 cut(s) | 212, 621 |
| Bsp119I | TTCGAA | 1 cut(s) | 103 |
| Bsp143I | GATC | 2 cut(s) | 30, 158 |
| Bsp19I | CCATGG | 1 cut(s) | 278 |
| BspACI | CCGC | 5 cut(s) | 812, 847, 884, 1148, 1247 |
| BspANI | GGCC | 1 cut(s) | 983 |
| BspLI | GGNNCC | 3 cut(s) | 368, 934, 1258 |
| BspMI | ACCTGC | 1 cut(s) | 282 |
| BspT104I | TTCGAA | 1 cut(s) | 103 |
| BspTI | CTTAAG | 2 cut(s) | 553, 893 |
| BsrFI | RCCGGY | 1 cut(s) | 329 |
| BsrI | ACTGG | 6 cut(s) | 223, 407, 988, 1031, 1063, 1093 |
| BssAI | RCCGGY | 1 cut(s) | 329 |
| BssECI | CCNNGG | 3 cut(s) | 278, 535, 1182 |
| BssMI | GATC | 2 cut(s) | 30, 158 |
| BssNI | GRCGYC | 1 cut(s) | 1250 |
| BssT1I | CCWWGG | 2 cut(s) | 278, 535 |
| Bst2UI | CCWGG | 2 cut(s) | 432, 1183 |
| Bst4CI | ACNGT | 1 cut(s) | 1190 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstACI | GRCGYC | 1 cut(s) | 1250 |
| BstAFI | CTTAAG | 2 cut(s) | 553, 893 |
| BstBAI | YACGTR | 1 cut(s) | 424 |
| BstBI | TTCGAA | 1 cut(s) | 103 |
| BstC8I | GCNNGC | 2 cut(s) | 285, 882 |
| BstDSI | CCRYGG | 1 cut(s) | 278 |
| BstF5I | GGATG | 3 cut(s) | 595, 1003, 1228 |
| BstH2I | RGCGCY | 1 cut(s) | 460 |
| BstHHI | GCGC | 2 cut(s) | 459, 1308 |
| BstKTI | GATC | 2 cut(s) | 33, 161 |
| BstMAI | GTCTC | 2 cut(s) | 1140, 1149 |
| BstMBI | GATC | 2 cut(s) | 30, 158 |
| BstMCI | CGRYCG | 1 cut(s) | 33 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 463, 846, 1247 |
| BstNI | CCWGG | 2 cut(s) | 432, 1183 |
| BstNSI | RCATGY | 1 cut(s) | 356 |
| BstSCI | CCNGG | 2 cut(s) | 430, 1181 |
| BstSFI | CTRYAG | 2 cut(s) | 1104, 1319 |
| BstSNI | TACGTA | 1 cut(s) | 424 |
| BstV1I | GCAGC | 4 cut(s) | 254, 795, 899, 1051 |
| BsuRI | GGCC | 1 cut(s) | 983 |
| BtgI | CCRYGG | 1 cut(s) | 278 |
| BtsCI | GGATG | 3 cut(s) | 595, 1003, 1228 |
| BtsIMutI | CAGTG | 1 cut(s) | 1086 |
| BveI | ACCTGC | 1 cut(s) | 282 |
| Cac8I | GCNNGC | 2 cut(s) | 285, 882 |
| CaiI | CAGNNNCTG | 1 cut(s) | 962 |
| CfoI | GCGC | 2 cut(s) | 459, 1308 |
| Cfr10I | RCCGGY | 1 cut(s) | 329 |
| Cfr13I | GGNCC | 1 cut(s) | 933 |
| CseI | GACGC | 1 cut(s) | 1239 |
| CsiI | ACCWGGT | 1 cut(s) | 430 |
| Csp6I | GTAC | 1 cut(s) | 1169 |
| CspAI | ACCGGT | 1 cut(s) | 329 |
| CviAII | CATG | 5 cut(s) | 279, 353, 371, 706, 976 |
| CviQI | GTAC | 1 cut(s) | 1169 |
| DpnI | GATC | 2 cut(s) | 32, 160 |
| DpnII | GATC | 2 cut(s) | 30, 158 |
| EaeI | YGGCCR | 1 cut(s) | 981 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| Eco105I | TACGTA | 1 cut(s) | 424 |
| Eco130I | CCWWGG | 2 cut(s) | 278, 535 |
| Eco47I | GGWCC | 1 cut(s) | 933 |
| Eco88I | CYCGRG | 2 cut(s) | 212, 621 |
| EcoRI | GAATTC | 1 cut(s) | 73 |
| EcoRII | CCWGG | 2 cut(s) | 430, 1181 |
| EcoT14I | CCWWGG | 2 cut(s) | 278, 535 |
| ErhI | CCWWGG | 2 cut(s) | 278, 535 |
| FaeI | CATG | 5 cut(s) | 282, 356, 374, 709, 979 |
| FaqI | GGGAC | 3 cut(s) | 229, 946, 1199 |
| FatI | CATG | 5 cut(s) | 278, 352, 370, 705, 975 |
| FauNDI | CATATG | 1 cut(s) | 1217 |
| Fnu4HI | GCNGC | 8 cut(s) | 268, 809, 812, 847, 885, 888, 1065, 1248 |
| FokI | GGATG | 3 cut(s) | 602, 1010, 1235 |
| Fsp4HI | GCNGC | 8 cut(s) | 268, 809, 812, 847, 885, 888, 1065, 1248 |
| FspBI | CTAG | 1 cut(s) | 993 |
| GlaI | GCGC | 2 cut(s) | 458, 1307 |
| GluI | GCNGC | 8 cut(s) | 268, 809, 812, 847, 885, 888, 1065, 1248 |
| GsuI | CTGGAG | 1 cut(s) | 424 |
| HaeII | RGCGCY | 1 cut(s) | 460 |
| HaeIII | GGCC | 1 cut(s) | 983 |
| HapII | CCGG | 4 cut(s) | 330, 815, 850, 1269 |
| HgaI | GACGC | 1 cut(s) | 1239 |
| HhaI | GCGC | 2 cut(s) | 459, 1308 |
| Hin1I | GRCGYC | 1 cut(s) | 1250 |
| Hin1II | CATG | 5 cut(s) | 282, 356, 374, 709, 979 |
| Hin6I | GCGC | 2 cut(s) | 457, 1306 |
| HinP1I | GCGC | 2 cut(s) | 457, 1306 |
| HincII | GTYRAC | 1 cut(s) | 973 |
| HindII | GTYRAC | 1 cut(s) | 973 |
| HindIII | AAGCTT | 4 cut(s) | 224, 248, 375, 1041 |
| HinfI | GANTC | 5 cut(s) | 298, 745, 1124, 1210, 1226 |
| HpaII | CCGG | 4 cut(s) | 330, 815, 850, 1269 |
| HphI | GGTGA | 1 cut(s) | 1121 |
| Hpy166II | GTNNAC | 3 cut(s) | 153, 400, 973 |
| Hpy188I | TCNGA | 2 cut(s) | 958, 1048 |
| Hpy188III | TCNNGA | 6 cut(s) | 146, 181, 214, 295, 335, 623 |
| Hpy8I | GTNNAC | 3 cut(s) | 153, 400, 973 |
| Hpy99I | CGWCG | 1 cut(s) | 725 |
| HpyAV | CCTTC | 5 cut(s) | 409, 470, 892, 1043, 1276 |
| HpyCH4III | ACNGT | 1 cut(s) | 1190 |
| HpyCH4IV | ACGT | 3 cut(s) | 319, 423, 911 |
| HpyCH4V | TGCA | 6 cut(s) | 10, 270, 352, 630, 1067, 1266 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 463, 846, 1247 |
| HpySE526I | ACGT | 3 cut(s) | 319, 423, 911 |
| Hsp92I | GRCGYC | 1 cut(s) | 1250 |
| Hsp92II | CATG | 5 cut(s) | 282, 356, 374, 709, 979 |
| HspAI | GCGC | 2 cut(s) | 457, 1306 |
| Kzo9I | GATC | 2 cut(s) | 30, 158 |
| Lsp1109I | GCAGC | 4 cut(s) | 254, 795, 899, 1051 |
| LweI | GCATC | 3 cut(s) | 603, 949, 1234 |
| MabI | ACCWGGT | 1 cut(s) | 430 |
| MaeI | CTAG | 1 cut(s) | 993 |
| MaeII | ACGT | 3 cut(s) | 319, 423, 911 |
| MaeIII | GTNAC | 1 cut(s) | 424 |
| MalI | GATC | 2 cut(s) | 32, 160 |
| MboI | GATC | 2 cut(s) | 30, 158 |
| MboII | GAAGA | 6 cut(s) | 92, 117, 175, 554, 697, 803 |
| MlsI | TGGCCA | 1 cut(s) | 983 |
| MluNI | TGGCCA | 1 cut(s) | 983 |
| MlyI | GAGTC | 1 cut(s) | 1235 |
| MmeI | TCCRAC | 1 cut(s) | 1152 |
| MnlI | CCTC | 9 cut(s) | 63, 340, 357, 399, 555, 780, 842, 1105, 1198 |
| Mox20I | TGGCCA | 1 cut(s) | 983 |
| MscI | TGGCCA | 1 cut(s) | 983 |
| MseI | TTAA | 2 cut(s) | 554, 894 |
| Msp20I | TGGCCA | 1 cut(s) | 983 |
| MspCI | CTTAAG | 2 cut(s) | 553, 893 |
| MspI | CCGG | 4 cut(s) | 330, 815, 850, 1269 |
| MspR9I | CCNGG | 2 cut(s) | 432, 1183 |
| MvaI | CCWGG | 2 cut(s) | 432, 1183 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 463, 846, 1247 |
| NcoI | CCATGG | 1 cut(s) | 278 |
| NdeI | CATATG | 1 cut(s) | 1217 |
| NdeII | GATC | 2 cut(s) | 30, 158 |
| NlaIII | CATG | 5 cut(s) | 282, 356, 374, 709, 979 |
| NlaIV | GGNNCC | 3 cut(s) | 368, 934, 1258 |
| NmeAIII | GCCGAG | 1 cut(s) | 243 |
| NspI | RCATGY | 1 cut(s) | 356 |
| NspV | TTCGAA | 1 cut(s) | 103 |
| PfeI | GAWTC | 4 cut(s) | 298, 745, 1124, 1210 |
| PinAI | ACCGGT | 1 cut(s) | 329 |
| PkrI | GCNGC | 8 cut(s) | 269, 810, 813, 848, 886, 889, 1066, 1249 |
| Ple19I | CGATCG | 1 cut(s) | 33 |
| PleI | GAGTC | 1 cut(s) | 1234 |
| PpsI | GAGTC | 1 cut(s) | 1234 |
| Ppu21I | YACGTR | 1 cut(s) | 424 |
| PsiI | TTATAA | 1 cut(s) | 20 |
| Psp6I | CCWGG | 2 cut(s) | 430, 1181 |
| PspGI | CCWGG | 2 cut(s) | 430, 1181 |
| PspN4I | GGNNCC | 3 cut(s) | 368, 934, 1258 |
| PspPI | GGNCC | 1 cut(s) | 933 |
| PstNI | CAGNNNCTG | 1 cut(s) | 962 |
| PvuI | CGATCG | 1 cut(s) | 33 |
| RsaI | GTAC | 1 cut(s) | 1170 |
| RsaNI | GTAC | 1 cut(s) | 1169 |
| SaqAI | TTAA | 2 cut(s) | 554, 894 |
| SatI | GCNGC | 8 cut(s) | 268, 809, 812, 847, 885, 888, 1065, 1248 |
| Sau3AI | GATC | 2 cut(s) | 30, 158 |
| Sau96I | GGNCC | 1 cut(s) | 933 |
| SchI | GAGTC | 1 cut(s) | 1235 |
| ScrFI | CCNGG | 2 cut(s) | 432, 1183 |
| SexAI | ACCWGGT | 1 cut(s) | 430 |
| SfaNI | GCATC | 3 cut(s) | 603, 949, 1234 |
| SfcI | CTRYAG | 2 cut(s) | 1104, 1319 |
| SfuI | TTCGAA | 1 cut(s) | 103 |
| SinI | GGWCC | 1 cut(s) | 933 |
| SmlI | CTYRAG | 2 cut(s) | 553, 893 |
| SmoI | CTYRAG | 2 cut(s) | 553, 893 |
| SnaBI | TACGTA | 1 cut(s) | 424 |
| SsiI | CCGC | 5 cut(s) | 812, 847, 884, 1148, 1247 |
| SspI | AATATT | 1 cut(s) | 313 |
| SspMI | CTAG | 1 cut(s) | 993 |
| StyD4I | CCNGG | 2 cut(s) | 430, 1181 |
| StyI | CCWWGG | 2 cut(s) | 278, 535 |
| TaaI | ACNGT | 1 cut(s) | 1190 |
| TaiI | ACGT | 3 cut(s) | 322, 426, 914 |
| TaqI | TCGA | 4 cut(s) | 33, 103, 161, 577 |
| TauI | GCSGC | 4 cut(s) | 814, 849, 887, 1250 |
| TfiI | GAWTC | 4 cut(s) | 298, 745, 1124, 1210 |
| Tru1I | TTAA | 2 cut(s) | 554, 894 |
| Tru9I | TTAA | 2 cut(s) | 554, 894 |
| TscAI | CASTG | 1 cut(s) | 1093 |
| TseI | GCWGC | 4 cut(s) | 267, 808, 887, 1064 |
| TspDTI | ATGAA | 3 cut(s) | 66, 280, 387 |
| TspGWI | ACGGA | 2 cut(s) | 661, 761 |
| TspRI | CASTG | 1 cut(s) | 1093 |
| Vha464I | CTTAAG | 2 cut(s) | 553, 893 |
| VpaK11BI | GGWCC | 1 cut(s) | 933 |
| XapI | RAATTY | 4 cut(s) | 14, 73, 763, 1012 |
| XceI | RCATGY | 1 cut(s) | 356 |
| XspI | CTAG | 1 cut(s) | 993 |