TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1179 |
| Acc36I | ACCTGC | 2 cut(s) | 205, 1643 |
| AccI | GTMKAC | 1 cut(s) | 1997 |
| AccII | CGCG | 1 cut(s) | 2101 |
| AciI | CCGC | 3 cut(s) | 737, 1606, 2071 |
| AclWI | GGATC | 1 cut(s) | 989 |
| AcsI | RAATTY | 5 cut(s) | 343, 751, 800, 1015, 1583 |
| AcuI | CTGAAG | 3 cut(s) | 309, 1122, 1971 |
| AfaI | GTAC | 5 cut(s) | 488, 1099, 1319, 1533, 1869 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 310, 709, 999, 1602 |
| AflII | CTTAAG | 1 cut(s) | 1598 |
| AjnI | CCWGG | 3 cut(s) | 1216, 1320, 1816 |
| AleI | CACNNNNGTG | 1 cut(s) | 2005 |
| Alw21I | GWGCWC | 1 cut(s) | 1904 |
| Alw26I | GTCTC | 5 cut(s) | 56, 160, 568, 1661, 2032 |
| AlwI | GGATC | 1 cut(s) | 989 |
| Ama87I | CYCGRG | 1 cut(s) | 998 |
| AoxI | GGCC | 3 cut(s) | 773, 1749, 2107 |
| ApeKI | GCWGC | 2 cut(s) | 593, 1649 |
| ApoI | RAATTY | 5 cut(s) | 343, 751, 800, 1015, 1583 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1572 |
| AspLEI | GCGC | 1 cut(s) | 2101 |
| AsuHPI | GGTGA | 3 cut(s) | 197, 1206, 1276 |
| AvaI | CYCGRG | 1 cut(s) | 998 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1323, 1356 |
| BanII | GRGCYC | 2 cut(s) | 715, 1904 |
| BauI | CACGAG | 2 cut(s) | 368, 1469 |
| BbsI | GAAGAC | 4 cut(s) | 297, 1238, 1457, 1959 |
| Bbv12I | GWGCWC | 1 cut(s) | 1904 |
| BbvI | GCAGC | 2 cut(s) | 580, 1661 |
| BccI | CCATC | 3 cut(s) | 326, 1354, 1739 |
| BciT130I | CCWGG | 3 cut(s) | 1218, 1322, 1818 |
| BclI | TGATCA | 1 cut(s) | 264 |
| BcoDI | GTCTC | 5 cut(s) | 56, 160, 568, 1661, 2032 |
| BfaI | CTAG | 4 cut(s) | 329, 383, 1128, 1689 |
| BfmI | CTRYAG | 3 cut(s) | 627, 794, 1350 |
| BfrI | CTTAAG | 1 cut(s) | 1598 |
| BfuAI | ACCTGC | 2 cut(s) | 205, 1643 |
| BisI | GCNGC | 2 cut(s) | 594, 1650 |
| BlsI | GCNGC | 2 cut(s) | 595, 1651 |
| BmcAI | AGTACT | 1 cut(s) | 1099 |
| Bme1390I | CCNGG | 3 cut(s) | 1218, 1322, 1818 |
| BmeT110I | CYCGRG | 1 cut(s) | 998 |
| BmrFI | CCNGG | 3 cut(s) | 1218, 1322, 1818 |
| BmsI | GCATC | 9 cut(s) | 377, 496, 772, 889, 1368, 1717, 1879, 1936, 2011 |
| BpiI | GAAGAC | 4 cut(s) | 297, 1238, 1457, 1959 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 697, 729, 760, 792 |
| BpmI | CTGGAG | 2 cut(s) | 1210, 1863 |
| BpuEI | CTTGAG | 2 cut(s) | 762, 1643 |
| Bsa29I | ATCGAT | 1 cut(s) | 1887 |
| BsaI | GGTCTC | 2 cut(s) | 568, 1661 |
| BsaJI | CCNNGG | 6 cut(s) | 96, 400, 786, 1064, 1577, 1761 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 310, 709, 999, 1602 |
| Bse1I | ACTGG | 3 cut(s) | 1116, 1193, 1799 |
| Bse3DI | GCAATG | 1 cut(s) | 993 |
| BseBI | CCWGG | 3 cut(s) | 1218, 1322, 1818 |
| BseCI | ATCGAT | 1 cut(s) | 1887 |
| BseDI | CCNNGG | 6 cut(s) | 96, 400, 786, 1064, 1577, 1761 |
| BseGI | GGATG | 5 cut(s) | 392, 1330, 1359, 1534, 1771 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 310, 709, 999, 1602 |
| BseMI | GCAATG | 1 cut(s) | 993 |
| BseMII | CTCAG | 4 cut(s) | 176, 611, 901, 1149 |
| BseNI | ACTGG | 3 cut(s) | 1116, 1193, 1799 |
| BseRI | GAGGAG | 1 cut(s) | 1624 |
| BseXI | GCAGC | 2 cut(s) | 580, 1661 |
| BseYI | CCCAGC | 1 cut(s) | 1546 |
| Bsh1236I | CGCG | 1 cut(s) | 2101 |
| BshFI | GGCC | 3 cut(s) | 775, 1751, 2109 |
| BshVI | ATCGAT | 1 cut(s) | 1887 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1904 |
| BsiHKCI | CYCGRG | 1 cut(s) | 998 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 310, 709, 999, 1602 |
| BsmAI | GTCTC | 5 cut(s) | 56, 160, 568, 1661, 2032 |
| BsmI | GAATGC | 2 cut(s) | 283, 1397 |
| BsnI | GGCC | 3 cut(s) | 775, 1751, 2109 |
| Bso31I | GGTCTC | 2 cut(s) | 568, 1661 |
| BsoBI | CYCGRG | 1 cut(s) | 998 |
| Bsp1286I | GDGCHC | 2 cut(s) | 715, 1904 |
| Bsp143I | GATC | 2 cut(s) | 264, 981 |
| Bsp19I | CCATGG | 2 cut(s) | 1064, 1577 |
| BspACI | CCGC | 3 cut(s) | 737, 1606, 2071 |
| BspANI | GGCC | 3 cut(s) | 775, 1751, 2109 |
| BspCNI | CTCAG | 4 cut(s) | 175, 610, 900, 1150 |
| BspDI | ATCGAT | 1 cut(s) | 1887 |
| BspFNI | CGCG | 1 cut(s) | 2101 |
| BspMAI | CTGCAG | 1 cut(s) | 798 |
| BspMI | ACCTGC | 2 cut(s) | 205, 1643 |
| BspPI | GGATC | 1 cut(s) | 989 |
| BspQI | GCTCTTC | 1 cut(s) | 1892 |
| BspTI | CTTAAG | 1 cut(s) | 1598 |
| BspTNI | GGTCTC | 2 cut(s) | 568, 1661 |
| BsrDI | GCAATG | 1 cut(s) | 993 |
| BsrI | ACTGG | 3 cut(s) | 1116, 1193, 1799 |
| BssECI | CCNNGG | 6 cut(s) | 96, 400, 786, 1064, 1577, 1761 |
| BssMI | GATC | 2 cut(s) | 264, 981 |
| BssSI | CACGAG | 2 cut(s) | 368, 1469 |
| BssT1I | CCWWGG | 5 cut(s) | 400, 786, 1064, 1577, 1761 |
| Bst2BI | CACGAG | 2 cut(s) | 368, 1469 |
| Bst2UI | CCWGG | 3 cut(s) | 1218, 1322, 1818 |
| Bst4CI | ACNGT | 2 cut(s) | 498, 1958 |
| Bst6I | CTCTTC | 3 cut(s) | 761, 1892, 2098 |
| BstAFI | CTTAAG | 1 cut(s) | 1598 |
| BstC8I | GCNNGC | 4 cut(s) | 581, 624, 835, 1647 |
| BstDEI | CTNAG | 6 cut(s) | 162, 230, 597, 887, 1158, 2085 |
| BstDSI | CCRYGG | 2 cut(s) | 1064, 1577 |
| BstEII | GGTNACC | 1 cut(s) | 1384 |
| BstF5I | GGATG | 5 cut(s) | 392, 1330, 1359, 1534, 1771 |
| BstFNI | CGCG | 1 cut(s) | 2101 |
| BstHHI | GCGC | 1 cut(s) | 2101 |
| BstKTI | GATC | 2 cut(s) | 267, 984 |
| BstMAI | GTCTC | 5 cut(s) | 56, 160, 568, 1661, 2032 |
| BstMBI | GATC | 2 cut(s) | 264, 981 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 658, 2030, 2051 |
| BstNI | CCWGG | 3 cut(s) | 1218, 1322, 1818 |
| BstNSI | RCATGY | 2 cut(s) | 173, 841 |
| BstPI | GGTNACC | 1 cut(s) | 1384 |
| BstSCI | CCNGG | 3 cut(s) | 1216, 1320, 1816 |
| BstSFI | CTRYAG | 3 cut(s) | 627, 794, 1350 |
| BstUI | CGCG | 1 cut(s) | 2101 |
| BstV1I | GCAGC | 2 cut(s) | 580, 1661 |
| BstV2I | GAAGAC | 4 cut(s) | 297, 1238, 1457, 1959 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 551, 1921 |
| Bsu15I | ATCGAT | 1 cut(s) | 1887 |
| BsuRI | GGCC | 3 cut(s) | 775, 1751, 2109 |
| BsuTUI | ATCGAT | 1 cut(s) | 1887 |
| BtgI | CCRYGG | 2 cut(s) | 1064, 1577 |
| BtsCI | GGATG | 5 cut(s) | 392, 1330, 1359, 1534, 1771 |
| BtsI | GCAGTG | 1 cut(s) | 791 |
| BtsIMutI | CAGTG | 4 cut(s) | 274, 791, 1302, 1563 |
| BveI | ACCTGC | 2 cut(s) | 205, 1643 |
| Cac8I | GCNNGC | 4 cut(s) | 581, 624, 835, 1647 |
| CfoI | GCGC | 1 cut(s) | 2101 |
| ClaI | ATCGAT | 1 cut(s) | 1887 |
| CseI | GACGC | 1 cut(s) | 1232 |
| CsiI | ACCWGGT | 2 cut(s) | 1216, 1816 |
| Csp6I | GTAC | 5 cut(s) | 487, 1098, 1318, 1532, 1868 |
| CviAII | CATG | 8 cut(s) | 170, 295, 551, 838, 1065, 1337, 1578, 1744 |
| CviQI | GTAC | 5 cut(s) | 487, 1098, 1318, 1532, 1868 |
| DdeI | CTNAG | 6 cut(s) | 162, 230, 597, 887, 1158, 2085 |
| DpnI | GATC | 2 cut(s) | 266, 983 |
| DpnII | GATC | 2 cut(s) | 264, 981 |
| DraI | TTTAAA | 2 cut(s) | 441, 1908 |
| Eam1104I | CTCTTC | 3 cut(s) | 761, 1892, 2098 |
| EarI | CTCTTC | 3 cut(s) | 761, 1892, 2098 |
| EciI | GGCGGA | 1 cut(s) | 1621 |
| Ecl136II | GAGCTC | 1 cut(s) | 1902 |
| Eco130I | CCWWGG | 5 cut(s) | 400, 786, 1064, 1577, 1761 |
| Eco147I | AGGCCT | 1 cut(s) | 775 |
| Eco24I | GRGCYC | 2 cut(s) | 715, 1904 |
| Eco31I | GGTCTC | 2 cut(s) | 568, 1661 |
| Eco32I | GATATC | 3 cut(s) | 106, 300, 1885 |
| Eco53kI | GAGCTC | 1 cut(s) | 1902 |
| Eco57I | CTGAAG | 3 cut(s) | 309, 1122, 1971 |
| Eco88I | CYCGRG | 1 cut(s) | 998 |
| Eco91I | GGTNACC | 1 cut(s) | 1384 |
| EcoICRI | GAGCTC | 1 cut(s) | 1902 |
| EcoO65I | GGTNACC | 1 cut(s) | 1384 |
| EcoRI | GAATTC | 1 cut(s) | 751 |
| EcoRII | CCWGG | 3 cut(s) | 1216, 1320, 1816 |
| EcoRV | GATATC | 3 cut(s) | 106, 300, 1885 |
| EcoT14I | CCWWGG | 5 cut(s) | 400, 786, 1064, 1577, 1761 |
| EcoT38I | GRGCYC | 2 cut(s) | 715, 1904 |
| ErhI | CCWWGG | 5 cut(s) | 400, 786, 1064, 1577, 1761 |
| FaeI | CATG | 8 cut(s) | 173, 298, 554, 841, 1068, 1340, 1581, 1747 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 12, 44, 1347, 1379 |
| FatI | CATG | 8 cut(s) | 169, 294, 550, 837, 1064, 1336, 1577, 1743 |
| FbaI | TGATCA | 1 cut(s) | 264 |
| FblI | GTMKAC | 1 cut(s) | 1997 |
| Fnu4HI | GCNGC | 2 cut(s) | 594, 1650 |
| FokI | GGATG | 5 cut(s) | 399, 1337, 1346, 1541, 1778 |
| FriOI | GRGCYC | 2 cut(s) | 715, 1904 |
| Fsp4HI | GCNGC | 2 cut(s) | 594, 1650 |
| FspBI | CTAG | 4 cut(s) | 329, 383, 1128, 1689 |
| GlaI | GCGC | 1 cut(s) | 2100 |
| GluI | GCNGC | 2 cut(s) | 594, 1650 |
| GsaI | CCCAGC | 1 cut(s) | 1550 |
| GsuI | CTGGAG | 2 cut(s) | 1210, 1863 |
| HaeIII | GGCC | 3 cut(s) | 775, 1751, 2109 |
| HgaI | GACGC | 1 cut(s) | 1232 |
| HhaI | GCGC | 1 cut(s) | 2101 |
| Hin1II | CATG | 8 cut(s) | 173, 298, 554, 841, 1068, 1340, 1581, 1747 |
| Hin6I | GCGC | 1 cut(s) | 2099 |
| HinP1I | GCGC | 1 cut(s) | 2099 |
| HincII | GTYRAC | 1 cut(s) | 1741 |
| HindII | GTYRAC | 1 cut(s) | 1741 |
| HindIII | AAGCTT | 2 cut(s) | 650, 1034 |
| HinfI | GANTC | 7 cut(s) | 215, 323, 478, 689, 919, 1052, 1666 |
| HphI | GGTGA | 3 cut(s) | 197, 1206, 1276 |
| Hpy166II | GTNNAC | 9 cut(s) | 334, 415, 487, 529, 1510, 1741, 1868, 1998, 2012 |
| Hpy188III | TCNNGA | 7 cut(s) | 340, 370, 679, 703, 748, 779, 1660 |
| Hpy8I | GTNNAC | 9 cut(s) | 334, 415, 487, 529, 1510, 1741, 1868, 1998, 2012 |
| HpyCH4III | ACNGT | 2 cut(s) | 498, 1958 |
| HpyCH4IV | ACGT | 1 cut(s) | 489 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 658, 2030, 2051 |
| HpyF3I | CTNAG | 6 cut(s) | 162, 230, 597, 887, 1158, 2085 |
| HpySE526I | ACGT | 1 cut(s) | 489 |
| Hsp92II | CATG | 8 cut(s) | 173, 298, 554, 841, 1068, 1340, 1581, 1747 |
| HspAI | GCGC | 1 cut(s) | 2099 |
| Ksp22I | TGATCA | 1 cut(s) | 264 |
| Kzo9I | GATC | 2 cut(s) | 264, 981 |
| LguI | GCTCTTC | 1 cut(s) | 1892 |
| LmnI | GCTCC | 2 cut(s) | 1240, 1554 |
| Lsp1109I | GCAGC | 2 cut(s) | 580, 1661 |
| LweI | GCATC | 9 cut(s) | 377, 496, 772, 889, 1368, 1717, 1879, 1936, 2011 |
| MabI | ACCWGGT | 2 cut(s) | 1216, 1816 |
| MaeI | CTAG | 4 cut(s) | 329, 383, 1128, 1689 |
| MaeII | ACGT | 1 cut(s) | 489 |
| MaeIII | GTNAC | 4 cut(s) | 192, 805, 1384, 1400 |
| MalI | GATC | 2 cut(s) | 266, 983 |
| MboI | GATC | 2 cut(s) | 264, 981 |
| MhlI | GDGCHC | 2 cut(s) | 715, 1904 |
| MlyI | GAGTC | 1 cut(s) | 1046 |
| MmeI | TCCRAC | 3 cut(s) | 192, 1029, 1938 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1572 |
| MseI | TTAA | 6 cut(s) | 408, 440, 636, 1200, 1599, 1907 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2005 |
| MspA1I | CMGCKG | 2 cut(s) | 68, 593 |
| MspCI | CTTAAG | 1 cut(s) | 1598 |
| MspR9I | CCNGG | 3 cut(s) | 1218, 1322, 1818 |
| MssI | GTTTAAAC | 1 cut(s) | 441 |
| Mva1269I | GAATGC | 2 cut(s) | 283, 1397 |
| MvaI | CCWGG | 3 cut(s) | 1218, 1322, 1818 |
| MvnI | CGCG | 1 cut(s) | 2101 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 658, 2030, 2051 |
| NcoI | CCATGG | 2 cut(s) | 1064, 1577 |
| NdeII | GATC | 2 cut(s) | 264, 981 |
| NlaIII | CATG | 8 cut(s) | 173, 298, 554, 841, 1068, 1340, 1581, 1747 |
| NmeAIII | GCCGAG | 1 cut(s) | 2009 |
| NspI | RCATGY | 2 cut(s) | 173, 841 |
| OliI | CACNNNNGTG | 1 cut(s) | 2005 |
| PceI | AGGCCT | 1 cut(s) | 775 |
| PciSI | GCTCTTC | 1 cut(s) | 1892 |
| PctI | GAATGC | 2 cut(s) | 283, 1397 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1572 |
| PfeI | GAWTC | 6 cut(s) | 215, 323, 478, 689, 919, 1666 |
| PkrI | GCNGC | 2 cut(s) | 595, 1651 |
| PleI | GAGTC | 1 cut(s) | 1046 |
| PmeI | GTTTAAAC | 1 cut(s) | 441 |
| PpsI | GAGTC | 1 cut(s) | 1046 |
| PsiI | TTATAA | 1 cut(s) | 1179 |
| Psp124BI | GAGCTC | 1 cut(s) | 1904 |
| Psp6I | CCWGG | 3 cut(s) | 1216, 1320, 1816 |
| PspEI | GGTNACC | 1 cut(s) | 1384 |
| PspFI | CCCAGC | 1 cut(s) | 1546 |
| PspGI | CCWGG | 3 cut(s) | 1216, 1320, 1816 |
| PstI | CTGCAG | 1 cut(s) | 798 |
| PvuII | CAGCTG | 2 cut(s) | 68, 593 |
| RsaI | GTAC | 5 cut(s) | 488, 1099, 1319, 1533, 1869 |
| RsaNI | GTAC | 5 cut(s) | 487, 1098, 1318, 1532, 1868 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2005 |
| SacI | GAGCTC | 1 cut(s) | 1904 |
| SapI | GCTCTTC | 1 cut(s) | 1892 |
| SaqAI | TTAA | 6 cut(s) | 408, 440, 636, 1200, 1599, 1907 |
| SatI | GCNGC | 2 cut(s) | 594, 1650 |
| Sau3AI | GATC | 2 cut(s) | 264, 981 |
| ScaI | AGTACT | 1 cut(s) | 1099 |
| SchI | GAGTC | 1 cut(s) | 1046 |
| ScrFI | CCNGG | 3 cut(s) | 1218, 1322, 1818 |
| SduI | GDGCHC | 2 cut(s) | 715, 1904 |
| SexAI | ACCWGGT | 2 cut(s) | 1216, 1816 |
| SfaNI | GCATC | 9 cut(s) | 377, 496, 772, 889, 1368, 1717, 1879, 1936, 2011 |
| SfcI | CTRYAG | 3 cut(s) | 627, 794, 1350 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2005 |
| SmlI | CTYRAG | 3 cut(s) | 777, 1598, 1658 |
| SmoI | CTYRAG | 3 cut(s) | 777, 1598, 1658 |
| SseBI | AGGCCT | 1 cut(s) | 775 |
| SsiI | CCGC | 3 cut(s) | 737, 1606, 2071 |
| SspI | AATATT | 1 cut(s) | 605 |
| SspMI | CTAG | 4 cut(s) | 329, 383, 1128, 1689 |
| SstI | GAGCTC | 1 cut(s) | 1904 |
| StuI | AGGCCT | 1 cut(s) | 775 |
| StyD4I | CCNGG | 3 cut(s) | 1216, 1320, 1816 |
| StyI | CCWWGG | 5 cut(s) | 400, 786, 1064, 1577, 1761 |
| TaaI | ACNGT | 2 cut(s) | 498, 1958 |
| TaiI | ACGT | 1 cut(s) | 492 |
| TaqI | TCGA | 5 cut(s) | 202, 321, 1270, 1822, 1887 |
| TatI | WGTACW | 3 cut(s) | 1097, 1531, 1867 |
| TfiI | GAWTC | 6 cut(s) | 215, 323, 478, 689, 919, 1666 |
| Tru1I | TTAA | 6 cut(s) | 408, 440, 636, 1200, 1599, 1907 |
| Tru9I | TTAA | 6 cut(s) | 408, 440, 636, 1200, 1599, 1907 |
| TscAI | CASTG | 4 cut(s) | 274, 798, 1309, 1570 |
| TseI | GCWGC | 2 cut(s) | 593, 1649 |
| TspDTI | ATGAA | 7 cut(s) | 17, 167, 491, 712, 1341, 1355, 1760 |
| TspRI | CASTG | 4 cut(s) | 274, 798, 1309, 1570 |
| Vha464I | CTTAAG | 1 cut(s) | 1598 |
| XapI | RAATTY | 5 cut(s) | 343, 751, 800, 1015, 1583 |
| XceI | RCATGY | 2 cut(s) | 173, 841 |
| XmiI | GTMKAC | 1 cut(s) | 1997 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1572 |
| XspI | CTAG | 4 cut(s) | 329, 383, 1128, 1689 |
| ZrmI | AGTACT | 1 cut(s) | 1099 |