TPR and ankyrin repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| UvrD-helicase | PF00580 | 482 - 571 | 3.1e-08 | UvrD/REP helicase N-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1241 |
| AarI | CACCTGC | 1 cut(s) | 2050 |
| Acc16I | TGCGCA | 1 cut(s) | 3028 |
| Acc36I | ACCTGC | 2 cut(s) | 2050, 3233 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 155, 4690, 4914 |
| AccBSI | CCGCTC | 1 cut(s) | 2804 |
| AccI | GTMKAC | 3 cut(s) | 362, 432, 3657 |
| AccII | CGCG | 1 cut(s) | 4728 |
| AciI | CCGC | 8 cut(s) | 494, 955, 990, 2804, 2825, 3106, 3183, 4575 |
| AclI | AACGTT | 1 cut(s) | 3399 |
| AclWI | GGATC | 3 cut(s) | 528, 2659, 4304 |
| AcoI | YGGCCR | 3 cut(s) | 1198, 2547, 4905 |
| AcuI | CTGAAG | 5 cut(s) | 912, 1820, 2345, 4013, 4100 |
| AcyI | GRCGYC | 1 cut(s) | 3540 |
| AfaI | GTAC | 5 cut(s) | 403, 1156, 1858, 3731, 4378 |
| AfeI | AGCGCT | 1 cut(s) | 2276 |
| AflIII | ACRYGT | 1 cut(s) | 1656 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 927, 4273 |
| AjnI | CCWGG | 4 cut(s) | 2466, 3724, 4534, 4638 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1059, 1091, 1757, 1789 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 221, 253 |
| Alw21I | GWGCWC | 5 cut(s) | 304, 2089, 2318, 4344, 4897 |
| Alw26I | GTCTC | 7 cut(s) | 1828, 2356, 2778, 3300, 3883, 4099, 4177 |
| AlwI | GGATC | 3 cut(s) | 528, 2659, 4304 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 890, 2365 |
| Ama87I | CYCGRG | 2 cut(s) | 2508, 4313 |
| Aor51HI | AGCGCT | 1 cut(s) | 2276 |
| ApeKI | GCWGC | 9 cut(s) | 884, 2446, 2678, 2717, 2756, 2843, 3024, 3908, 4327 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 473, 505, 2355, 2387, 3356, 3388 |
| AseI | ATTAAT | 2 cut(s) | 2934, 3062 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 51, 1833, 3083, 4391 |
| AspLEI | GCGC | 5 cut(s) | 909, 2277, 3029, 3419, 4563 |
| AspS9I | GGNCC | 9 cut(s) | 146, 1287, 1432, 2152, 2962, 3324, 3814, 4421, 4681 |
| AsuC2I | CCSGG | 3 cut(s) | 511, 1406, 1436 |
| AvaI | CYCGRG | 2 cut(s) | 2508, 4313 |
| AvaII | GGWCC | 4 cut(s) | 1432, 2962, 3814, 4421 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1889, 1922, 3721, 3754 |
| BalI | TGGCCA | 3 cut(s) | 1200, 2549, 4907 |
| BanII | GRGCYC | 2 cut(s) | 4030, 4344 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1533, 1565 |
| BbsI | GAAGAC | 1 cut(s) | 2394 |
| Bbv12I | GWGCWC | 5 cut(s) | 304, 2089, 2318, 4344, 4897 |
| BbvI | GCAGC | 9 cut(s) | 896, 2458, 2665, 2704, 2768, 2830, 3011, 3920, 4314 |
| BccI | CCATC | 8 cut(s) | 712, 956, 1136, 1385, 1501, 1585, 4443, 4883 |
| BceAI | ACGGC | 3 cut(s) | 102, 358, 447 |
| BciT130I | CCWGG | 4 cut(s) | 2468, 3726, 4536, 4640 |
| BciVI | GTATCC | 1 cut(s) | 715 |
| BclI | TGATCA | 2 cut(s) | 1585, 4305 |
| BcnI | CCSGG | 3 cut(s) | 511, 1406, 1436 |
| BcoDI | GTCTC | 7 cut(s) | 1828, 2356, 2778, 3300, 3883, 4099, 4177 |
| BfaI | CTAG | 9 cut(s) | 470, 686, 861, 1092, 2450, 2760, 2822, 2976, 3627 |
| BfmI | CTRYAG | 7 cut(s) | 844, 882, 1377, 2844, 3705, 4109, 4866 |
| BfoI | RGCGCY | 2 cut(s) | 2278, 4564 |
| BfuAI | ACCTGC | 2 cut(s) | 2050, 3233 |
| BfuI | GTATCC | 1 cut(s) | 715 |
| BglII | AGATCT | 3 cut(s) | 688, 1621, 3595 |
| BlpI | GCTNAGC | 2 cut(s) | 458, 4350 |
| Bme1390I | CCNGG | 7 cut(s) | 511, 1406, 1436, 2468, 3726, 4536, 4640 |
| Bme18I | GGWCC | 4 cut(s) | 1432, 2962, 3814, 4421 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 927, 4273 |
| BmeT110I | CYCGRG | 2 cut(s) | 2508, 4313 |
| BmgT120I | GGNCC | 9 cut(s) | 146, 1287, 1432, 2152, 2962, 3324, 3814, 4421, 4681 |
| BmiI | GGNNCC | 7 cut(s) | 147, 477, 1289, 3131, 3816, 4443, 4682 |
| BmrFI | CCNGG | 7 cut(s) | 511, 1406, 1436, 2468, 3726, 4536, 4640 |
| BmrI | ACTGGG | 3 cut(s) | 780, 2593, 4143 |
| BmuI | ACTGGG | 3 cut(s) | 780, 2593, 4143 |
| BpiI | GAAGAC | 1 cut(s) | 2394 |
| BpmI | CTGGAG | 3 cut(s) | 1956, 3708, 4528 |
| Bpu10I | CCTNAGC | 4 cut(s) | 933, 1369, 2271, 2970 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 458, 4350 |
| BpuEI | CTTGAG | 4 cut(s) | 215, 288, 1547, 4123 |
| BpuMI | CCSGG | 3 cut(s) | 511, 1406, 1436 |
| Bsa29I | ATCGAT | 1 cut(s) | 2663 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3891 |
| BsaHI | GRCGYC | 1 cut(s) | 3540 |
| BsaI | GGTCTC | 1 cut(s) | 3883 |
| BsaJI | CCNNGG | 9 cut(s) | 1435, 2466, 2509, 2859, 3232, 3725, 4085, 4382, 4665 |
| Bse3DI | GCAATG | 3 cut(s) | 2478, 2619, 4308 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3891 |
| BseBI | CCWGG | 4 cut(s) | 2468, 3726, 4536, 4640 |
| BseCI | ATCGAT | 1 cut(s) | 2663 |
| BseDI | CCNNGG | 9 cut(s) | 1435, 2466, 2509, 2859, 3232, 3725, 4085, 4382, 4665 |
| BseGI | GGATG | 9 cut(s) | 845, 2173, 2834, 2845, 3484, 3716, 4648, 4699, 4794 |
| BseJI | GATNNNNATC | 1 cut(s) | 3891 |
| BseMI | GCAATG | 3 cut(s) | 2478, 2619, 4308 |
| BseMII | CTCAG | 7 cut(s) | 554, 1414, 2889, 3411, 3926, 4329, 4364 |
| BseRI | GAGGAG | 2 cut(s) | 1055, 2510 |
| BseXI | GCAGC | 9 cut(s) | 896, 2458, 2665, 2704, 2768, 2830, 3011, 3920, 4314 |
| BseYI | CCCAGC | 1 cut(s) | 3195 |
| BsgI | GTGCAG | 3 cut(s) | 108, 2073, 4042 |
| Bsh1236I | CGCG | 1 cut(s) | 4728 |
| Bsh1285I | CGRYCG | 1 cut(s) | 764 |
| BshVI | ATCGAT | 1 cut(s) | 2663 |
| BsiEI | CGRYCG | 1 cut(s) | 764 |
| BsiHKAI | GWGCWC | 5 cut(s) | 304, 2089, 2318, 4344, 4897 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2508, 4313 |
| BsiSI | CCGG | 4 cut(s) | 511, 1405, 1435, 2607 |
| BslFI | GGGAC | 3 cut(s) | 771, 3122, 3800 |
| BsmAI | GTCTC | 7 cut(s) | 1828, 2356, 2778, 3300, 3883, 4099, 4177 |
| BsmBI | CGTCTC | 1 cut(s) | 1828 |
| BsmFI | GGGAC | 3 cut(s) | 771, 3122, 3800 |
| BsmI | GAATGC | 2 cut(s) | 293, 3607 |
| Bso31I | GGTCTC | 1 cut(s) | 3883 |
| BsoBI | CYCGRG | 2 cut(s) | 2508, 4313 |
| Bsp1286I | GDGCHC | 6 cut(s) | 304, 2089, 2318, 4030, 4344, 4897 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 458, 4350 |
| Bsp19I | CCATGG | 2 cut(s) | 4382, 4665 |
| Bsp68I | TCGCGA | 1 cut(s) | 4728 |
| BspACI | CCGC | 8 cut(s) | 494, 955, 990, 2804, 2825, 3106, 3183, 4575 |
| BspCNI | CTCAG | 7 cut(s) | 553, 1413, 2888, 3412, 3925, 4330, 4363 |
| BspDI | ATCGAT | 1 cut(s) | 2663 |
| BspFNI | CGCG | 1 cut(s) | 4728 |
| BspHI | TCATGA | 4 cut(s) | 240, 1078, 2010, 2527 |
| BspLI | GGNNCC | 7 cut(s) | 147, 477, 1289, 3131, 3816, 4443, 4682 |
| BspMAI | CTGCAG | 3 cut(s) | 886, 2848, 4870 |
| BspMI | ACCTGC | 2 cut(s) | 2050, 3233 |
| BspPI | GGATC | 3 cut(s) | 528, 2659, 4304 |
| BspTNI | GGTCTC | 1 cut(s) | 3883 |
| BsrBI | CCGCTC | 1 cut(s) | 2804 |
| BsrDI | GCAATG | 3 cut(s) | 2478, 2619, 4308 |
| BssECI | CCNNGG | 9 cut(s) | 1435, 2466, 2509, 2859, 3232, 3725, 4085, 4382, 4665 |
| BssNI | GRCGYC | 1 cut(s) | 3540 |
| BssT1I | CCWWGG | 5 cut(s) | 2859, 3232, 4085, 4382, 4665 |
| Bst2UI | CCWGG | 4 cut(s) | 2468, 3726, 4536, 4640 |
| Bst6I | CTCTTC | 5 cut(s) | 289, 708, 1668, 2646, 3113 |
| BstACI | GRCGYC | 1 cut(s) | 3540 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2714 |
| BstC8I | GCNNGC | 9 cut(s) | 911, 1454, 2121, 2485, 2952, 3323, 4258, 4414, 4858 |
| BstDSI | CCRYGG | 2 cut(s) | 4382, 4665 |
| BstEII | GGTNACC | 1 cut(s) | 489 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3236 |
| BstF5I | GGATG | 9 cut(s) | 845, 2173, 2834, 2845, 3484, 3716, 4648, 4699, 4794 |
| BstFNI | CGCG | 1 cut(s) | 4728 |
| BstH2I | RGCGCY | 2 cut(s) | 2278, 4564 |
| BstHHI | GCGC | 5 cut(s) | 909, 2277, 3029, 3419, 4563 |
| BstMAI | GTCTC | 7 cut(s) | 1828, 2356, 2778, 3300, 3883, 4099, 4177 |
| BstMCI | CGRYCG | 1 cut(s) | 764 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1382, 2443, 2714, 3191, 4822, 4874 |
| BstNI | CCWGG | 4 cut(s) | 2468, 3726, 4536, 4640 |
| BstNSI | RCATGY | 7 cut(s) | 962, 987, 1389, 1660, 2123, 2480, 2954 |
| BstPI | GGTNACC | 1 cut(s) | 489 |
| BstSCI | CCNGG | 7 cut(s) | 509, 1404, 1434, 2466, 3724, 4534, 4638 |
| BstSFI | CTRYAG | 7 cut(s) | 844, 882, 1377, 2844, 3705, 4109, 4866 |
| BstUI | CGCG | 1 cut(s) | 4728 |
| BstV1I | GCAGC | 9 cut(s) | 896, 2458, 2665, 2704, 2768, 2830, 3011, 3920, 4314 |
| BstV2I | GAAGAC | 1 cut(s) | 2394 |
| BstX2I | RGATCY | 4 cut(s) | 520, 688, 1621, 3595 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 486, 2499 |
| BstYI | RGATCY | 4 cut(s) | 520, 688, 1621, 3595 |
| Bsu15I | ATCGAT | 1 cut(s) | 2663 |
| BsuI | GTATCC | 1 cut(s) | 715 |
| BsuTUI | ATCGAT | 1 cut(s) | 2663 |
| BtgI | CCRYGG | 2 cut(s) | 4382, 4665 |
| BtgZI | GCGATG | 1 cut(s) | 3175 |
| BtsCI | GGATG | 9 cut(s) | 845, 2173, 2834, 2845, 3484, 3716, 4648, 4699, 4794 |
| BtsI | GCAGTG | 1 cut(s) | 3263 |
| BtuMI | TCGCGA | 1 cut(s) | 4728 |
| BveI | ACCTGC | 2 cut(s) | 2050, 3233 |
| Cac8I | GCNNGC | 9 cut(s) | 911, 1454, 2121, 2485, 2952, 3323, 4258, 4414, 4858 |
| CaiI | CAGNNNCTG | 2 cut(s) | 890, 2365 |
| CciI | TCATGA | 4 cut(s) | 240, 1078, 2010, 2527 |
| CfoI | GCGC | 5 cut(s) | 909, 2277, 3029, 3419, 4563 |
| Cfr13I | GGNCC | 9 cut(s) | 146, 1287, 1432, 2152, 2962, 3324, 3814, 4421, 4681 |
| ClaI | ATCGAT | 1 cut(s) | 2663 |
| CseI | GACGC | 2 cut(s) | 545, 3548 |
| CsiI | ACCWGGT | 1 cut(s) | 4534 |
| Csp6I | GTAC | 5 cut(s) | 402, 1155, 1857, 3730, 4377 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2460, 2495, 4794, 4829 |
| CviQI | GTAC | 5 cut(s) | 402, 1155, 1857, 3730, 4377 |
| DraI | TTTAAA | 2 cut(s) | 1651, 1938 |
| DriI | GACNNNNNGTC | 2 cut(s) | 927, 4273 |
| EaeI | YGGCCR | 3 cut(s) | 1198, 2547, 4905 |
| Eam1104I | CTCTTC | 5 cut(s) | 289, 708, 1668, 2646, 3113 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 927, 4273 |
| EarI | CTCTTC | 5 cut(s) | 289, 708, 1668, 2646, 3113 |
| EciI | GGCGGA | 1 cut(s) | 1005 |
| Ecl136II | GAGCTC | 1 cut(s) | 4342 |
| Eco130I | CCWWGG | 5 cut(s) | 2859, 3232, 4085, 4382, 4665 |
| Eco147I | AGGCCT | 3 cut(s) | 1818, 3260, 4391 |
| Eco24I | GRGCYC | 2 cut(s) | 4030, 4344 |
| Eco31I | GGTCTC | 1 cut(s) | 3883 |
| Eco32I | GATATC | 1 cut(s) | 1063 |
| Eco47I | GGWCC | 4 cut(s) | 1432, 2962, 3814, 4421 |
| Eco47III | AGCGCT | 1 cut(s) | 2276 |
| Eco53kI | GAGCTC | 1 cut(s) | 4342 |
| Eco57I | CTGAAG | 5 cut(s) | 912, 1820, 2345, 4013, 4100 |
| Eco88I | CYCGRG | 2 cut(s) | 2508, 4313 |
| Eco91I | GGTNACC | 1 cut(s) | 489 |
| EcoICRI | GAGCTC | 1 cut(s) | 4342 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3236 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2152 |
| EcoO65I | GGTNACC | 1 cut(s) | 489 |
| EcoRI | GAATTC | 3 cut(s) | 589, 3997, 4174 |
| EcoRII | CCWGG | 4 cut(s) | 2466, 3724, 4534, 4638 |
| EcoRV | GATATC | 1 cut(s) | 1063 |
| EcoT14I | CCWWGG | 5 cut(s) | 2859, 3232, 4085, 4382, 4665 |
| EcoT22I | ATGCAT | 2 cut(s) | 1387, 2478 |
| EcoT38I | GRGCYC | 2 cut(s) | 4030, 4344 |
| ErhI | CCWWGG | 5 cut(s) | 2859, 3232, 4085, 4382, 4665 |
| Esp3I | CGTCTC | 1 cut(s) | 1828 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2238, 2270 |
| FaqI | GGGAC | 3 cut(s) | 771, 3122, 3800 |
| FauI | CCCGC | 2 cut(s) | 2818, 3099 |
| FbaI | TGATCA | 2 cut(s) | 1585, 4305 |
| FblI | GTMKAC | 3 cut(s) | 362, 432, 3657 |
| FokI | GGATG | 9 cut(s) | 852, 2180, 2841, 2852, 3491, 3723, 4655, 4706, 4801 |
| FriOI | GRGCYC | 2 cut(s) | 4030, 4344 |
| FspBI | CTAG | 9 cut(s) | 470, 686, 861, 1092, 2450, 2760, 2822, 2976, 3627 |
| FspI | TGCGCA | 1 cut(s) | 3028 |
| GlaI | GCGC | 5 cut(s) | 908, 2276, 3028, 3418, 4562 |
| GsaI | CCCAGC | 1 cut(s) | 3199 |
| GsuI | CTGGAG | 3 cut(s) | 1956, 3708, 4528 |
| HaeII | RGCGCY | 2 cut(s) | 2278, 4564 |
| HapII | CCGG | 4 cut(s) | 511, 1405, 1435, 2607 |
| HgaI | GACGC | 2 cut(s) | 545, 3548 |
| HhaI | GCGC | 5 cut(s) | 909, 2277, 3029, 3419, 4563 |
| Hin1I | GRCGYC | 1 cut(s) | 3540 |
| Hin6I | GCGC | 5 cut(s) | 907, 2275, 3027, 3417, 4561 |
| HinP1I | GCGC | 5 cut(s) | 907, 2275, 3027, 3417, 4561 |
| HincII | GTYRAC | 1 cut(s) | 1842 |
| HindII | GTYRAC | 1 cut(s) | 1842 |
| HindIII | AAGCTT | 5 cut(s) | 1316, 2601, 3081, 3965, 4364 |
| HpaII | CCGG | 4 cut(s) | 511, 1405, 1435, 2607 |
| Hpy166II | GTNNAC | 8 cut(s) | 191, 363, 433, 652, 1397, 1842, 3658, 4379 |
| Hpy8I | GTNNAC | 8 cut(s) | 191, 363, 433, 652, 1397, 1842, 3658, 4379 |
| Hpy99I | CGWCG | 2 cut(s) | 1560, 2094 |
| HpyCH4IV | ACGT | 4 cut(s) | 1323, 1416, 3399, 4660 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1382, 2443, 2714, 3191, 4822, 4874 |
| HpySE526I | ACGT | 4 cut(s) | 1323, 1416, 3399, 4660 |
| Hsp92I | GRCGYC | 1 cut(s) | 3540 |
| HspAI | GCGC | 5 cut(s) | 907, 2275, 3027, 3417, 4561 |
| Ksp22I | TGATCA | 2 cut(s) | 1585, 4305 |
| LmnI | GCTCC | 8 cut(s) | 70, 1373, 1975, 3004, 3129, 3352, 4558, 4900 |
| Lsp1109I | GCAGC | 9 cut(s) | 896, 2458, 2665, 2704, 2768, 2830, 3011, 3920, 4314 |
| MabI | ACCWGGT | 1 cut(s) | 4534 |
| MaeI | CTAG | 9 cut(s) | 470, 686, 861, 1092, 2450, 2760, 2822, 2976, 3627 |
| MaeII | ACGT | 4 cut(s) | 1323, 1416, 3399, 4660 |
| MbiI | CCGCTC | 1 cut(s) | 2804 |
| MflI | RGATCY | 4 cut(s) | 520, 688, 1621, 3595 |
| MhlI | GDGCHC | 6 cut(s) | 304, 2089, 2318, 4030, 4344, 4897 |
| MlsI | TGGCCA | 3 cut(s) | 1200, 2549, 4907 |
| MluNI | TGGCCA | 3 cut(s) | 1200, 2549, 4907 |
| MmeI | TCCRAC | 4 cut(s) | 140, 3405, 4545, 4800 |
| Mox20I | TGGCCA | 3 cut(s) | 1200, 2549, 4907 |
| Mph1103I | ATGCAT | 2 cut(s) | 1387, 2478 |
| MroXI | GAANNNNTTC | 4 cut(s) | 51, 1833, 3083, 4391 |
| MscI | TGGCCA | 3 cut(s) | 1200, 2549, 4907 |
| MslI | CAYNNNNRTG | 2 cut(s) | 392, 2538 |
| Msp20I | TGGCCA | 3 cut(s) | 1200, 2549, 4907 |
| MspA1I | CMGCKG | 1 cut(s) | 4877 |
| MspI | CCGG | 4 cut(s) | 511, 1405, 1435, 2607 |
| MspR9I | CCNGG | 7 cut(s) | 511, 1406, 1436, 2468, 3726, 4536, 4640 |
| MssI | GTTTAAAC | 1 cut(s) | 1651 |
| Mva1269I | GAATGC | 2 cut(s) | 293, 3607 |
| MvaI | CCWGG | 4 cut(s) | 2468, 3726, 4536, 4640 |
| MvnI | CGCG | 1 cut(s) | 4728 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1382, 2443, 2714, 3191, 4822, 4874 |
| NciI | CCSGG | 3 cut(s) | 511, 1406, 1436 |
| NcoI | CCATGG | 2 cut(s) | 4382, 4665 |
| NlaIV | GGNNCC | 7 cut(s) | 147, 477, 1289, 3131, 3816, 4443, 4682 |
| NmuCI | GTSAC | 6 cut(s) | 489, 533, 919, 2573, 4669, 4879 |
| NruI | TCGCGA | 1 cut(s) | 4728 |
| NsbI | TGCGCA | 1 cut(s) | 3028 |
| NsiI | ATGCAT | 2 cut(s) | 1387, 2478 |
| NspI | RCATGY | 7 cut(s) | 962, 987, 1389, 1660, 2123, 2480, 2954 |
| PaeI | GCATGC | 2 cut(s) | 2123, 2954 |
| PagI | TCATGA | 4 cut(s) | 240, 1078, 2010, 2527 |
| PaqCI | CACCTGC | 1 cut(s) | 2050 |
| PceI | AGGCCT | 3 cut(s) | 1818, 3260, 4391 |
| PciI | ACATGT | 1 cut(s) | 1656 |
| PctI | GAATGC | 2 cut(s) | 293, 3607 |
| PdmI | GAANNNNTTC | 4 cut(s) | 51, 1833, 3083, 4391 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 155, 4690, 4914 |
| Ple19I | CGATCG | 1 cut(s) | 764 |
| PmeI | GTTTAAAC | 1 cut(s) | 1651 |
| PscI | ACATGT | 1 cut(s) | 1656 |
| PshBI | ATTAAT | 2 cut(s) | 2934, 3062 |
| PsiI | TTATAA | 1 cut(s) | 1241 |
| Psp124BI | GAGCTC | 1 cut(s) | 4344 |
| Psp1406I | AACGTT | 1 cut(s) | 3399 |
| Psp6I | CCWGG | 4 cut(s) | 2466, 3724, 4534, 4638 |
| PspEI | GGTNACC | 1 cut(s) | 489 |
| PspFI | CCCAGC | 1 cut(s) | 3195 |
| PspGI | CCWGG | 4 cut(s) | 2466, 3724, 4534, 4638 |
| PspN4I | GGNNCC | 7 cut(s) | 147, 477, 1289, 3131, 3816, 4443, 4682 |
| PspPI | GGNCC | 9 cut(s) | 146, 1287, 1432, 2152, 2962, 3324, 3814, 4421, 4681 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1138, 1170, 2235, 2267 |
| PstI | CTGCAG | 3 cut(s) | 886, 2848, 4870 |
| PstNI | CAGNNNCTG | 2 cut(s) | 890, 2365 |
| PsuI | RGATCY | 4 cut(s) | 520, 688, 1621, 3595 |
| PvuI | CGATCG | 1 cut(s) | 764 |
| PvuII | CAGCTG | 1 cut(s) | 4877 |
| RruI | TCGCGA | 1 cut(s) | 4728 |
| RsaI | GTAC | 5 cut(s) | 403, 1156, 1858, 3731, 4378 |
| RsaNI | GTAC | 5 cut(s) | 402, 1155, 1857, 3730, 4377 |
| RseI | CAYNNNNRTG | 2 cut(s) | 392, 2538 |
| SacI | GAGCTC | 1 cut(s) | 4344 |
| Sau96I | GGNCC | 9 cut(s) | 146, 1287, 1432, 2152, 2962, 3324, 3814, 4421, 4681 |
| ScrFI | CCNGG | 7 cut(s) | 511, 1406, 1436, 2468, 3726, 4536, 4640 |
| SduI | GDGCHC | 6 cut(s) | 304, 2089, 2318, 4030, 4344, 4897 |
| SexAI | ACCWGGT | 1 cut(s) | 4534 |
| SfcI | CTRYAG | 7 cut(s) | 844, 882, 1377, 2844, 3705, 4109, 4866 |
| SinI | GGWCC | 4 cut(s) | 1432, 2962, 3814, 4421 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 392, 2538 |
| SmlI | CTYRAG | 4 cut(s) | 194, 303, 1562, 4102 |
| SmoI | CTYRAG | 4 cut(s) | 194, 303, 1562, 4102 |
| SphI | GCATGC | 2 cut(s) | 2123, 2954 |
| SseBI | AGGCCT | 3 cut(s) | 1818, 3260, 4391 |
| SsiI | CCGC | 8 cut(s) | 494, 955, 990, 2804, 2825, 3106, 3183, 4575 |
| SspI | AATATT | 3 cut(s) | 1669, 2688, 3099 |
| SspMI | CTAG | 9 cut(s) | 470, 686, 861, 1092, 2450, 2760, 2822, 2976, 3627 |
| SstI | GAGCTC | 1 cut(s) | 4344 |
| StuI | AGGCCT | 3 cut(s) | 1818, 3260, 4391 |
| StyD4I | CCNGG | 7 cut(s) | 509, 1404, 1434, 2466, 3724, 4534, 4638 |
| StyI | CCWWGG | 5 cut(s) | 2859, 3232, 4085, 4382, 4665 |
| TaiI | ACGT | 4 cut(s) | 1326, 1419, 3402, 4663 |
| TaqI | TCGA | 8 cut(s) | 1140, 1214, 2089, 2350, 2663, 3526, 4007, 4130 |
| TatI | WGTACW | 2 cut(s) | 401, 4376 |
| TauI | GCSGC | 3 cut(s) | 958, 2807, 3185 |
| TseFI | GTSAC | 6 cut(s) | 489, 533, 919, 2573, 4669, 4879 |
| TseI | GCWGC | 9 cut(s) | 884, 2446, 2678, 2717, 2756, 2843, 3024, 3908, 4327 |
| Tsp45I | GTSAC | 6 cut(s) | 489, 533, 919, 2573, 4669, 4879 |
| TspGWI | ACGGA | 2 cut(s) | 1844, 3931 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 155, 4690, 4914 |
| VpaK11BI | GGWCC | 4 cut(s) | 1432, 2962, 3814, 4421 |
| VspI | ATTAAT | 2 cut(s) | 2934, 3062 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3236 |
| XbaI | TCTAGA | 2 cut(s) | 469, 3626 |
| XceI | RCATGY | 7 cut(s) | 962, 987, 1389, 1660, 2123, 2480, 2954 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 156 |
| XmiI | GTMKAC | 3 cut(s) | 362, 432, 3657 |
| XmnI | GAANNNNTTC | 4 cut(s) | 51, 1833, 3083, 4391 |
| XspI | CTAG | 9 cut(s) | 470, 686, 861, 1092, 2450, 2760, 2822, 2976, 3627 |
| Zsp2I | ATGCAT | 2 cut(s) | 1387, 2478 |