TPR and ankyrin repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF6469 | PF20073 | 72 - 194 | 1e-35 | Domain of unknown function (DUF6469) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 498 |
| AciI | CCGC | 1 cut(s) | 251 |
| AclWI | GGATC | 1 cut(s) | 339 |
| AcyI | GRCGYC | 1 cut(s) | 495 |
| AfaI | GTAC | 3 cut(s) | 454, 609, 620 |
| AflIII | ACRYGT | 1 cut(s) | 582 |
| AgsI | TTSAA | 3 cut(s) | 59, 419, 469 |
| AjnI | CCWGG | 1 cut(s) | 325 |
| AluBI | AGCT | 4 cut(s) | 176, 359, 572, 641 |
| AluI | AGCT | 4 cut(s) | 176, 359, 572, 641 |
| Alw21I | GWGCWC | 3 cut(s) | 178, 214, 590 |
| Alw44I | GTGCAC | 1 cut(s) | 586 |
| AlwI | GGATC | 1 cut(s) | 339 |
| Ama87I | CYCGRG | 1 cut(s) | 171 |
| AoxI | GGCC | 1 cut(s) | 323 |
| ApaLI | GTGCAC | 1 cut(s) | 586 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 111 |
| AspS9I | GGNCC | 1 cut(s) | 51 |
| AvaI | CYCGRG | 1 cut(s) | 171 |
| AvaII | GGWCC | 1 cut(s) | 51 |
| BaeGI | GKGCMC | 1 cut(s) | 590 |
| BanII | GRGCYC | 1 cut(s) | 178 |
| BauI | CACGAG | 1 cut(s) | 589 |
| BbsI | GAAGAC | 1 cut(s) | 9 |
| Bbv12I | GWGCWC | 3 cut(s) | 178, 214, 590 |
| BccI | CCATC | 4 cut(s) | 187, 380, 443, 594 |
| BciT130I | CCWGG | 1 cut(s) | 327 |
| BfaI | CTAG | 2 cut(s) | 321, 597 |
| BisI | GCNGC | 1 cut(s) | 251 |
| BlsI | GCNGC | 1 cut(s) | 252 |
| Bme1390I | CCNGG | 1 cut(s) | 327 |
| Bme18I | GGWCC | 1 cut(s) | 51 |
| BmeT110I | CYCGRG | 1 cut(s) | 171 |
| BmgT120I | GGNCC | 1 cut(s) | 51 |
| BmiI | GGNNCC | 1 cut(s) | 53 |
| BmrFI | CCNGG | 1 cut(s) | 327 |
| BmsI | GCATC | 2 cut(s) | 340, 488 |
| BpiI | GAAGAC | 1 cut(s) | 9 |
| BsaAI | YACGTR | 1 cut(s) | 618 |
| BsaHI | GRCGYC | 1 cut(s) | 495 |
| BsaJI | CCNNGG | 1 cut(s) | 326 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 283, 313 |
| Bse3DI | GCAATG | 1 cut(s) | 191 |
| BseBI | CCWGG | 1 cut(s) | 327 |
| BseDI | CCNNGG | 1 cut(s) | 326 |
| BseGI | GGATG | 1 cut(s) | 198 |
| BseMI | GCAATG | 1 cut(s) | 191 |
| BseMII | CTCAG | 1 cut(s) | 651 |
| BseSI | GKGCMC | 1 cut(s) | 590 |
| BshFI | GGCC | 1 cut(s) | 325 |
| BsiHKAI | GWGCWC | 3 cut(s) | 178, 214, 590 |
| BsiHKCI | CYCGRG | 1 cut(s) | 171 |
| BslFI | GGGAC | 1 cut(s) | 37 |
| BsmFI | GGGAC | 1 cut(s) | 37 |
| BsmI | GAATGC | 2 cut(s) | 317, 507 |
| BsnI | GGCC | 1 cut(s) | 325 |
| BsoBI | CYCGRG | 1 cut(s) | 171 |
| Bsp1286I | GDGCHC | 3 cut(s) | 178, 214, 590 |
| Bsp143I | GATC | 2 cut(s) | 331, 392 |
| BspACI | CCGC | 1 cut(s) | 251 |
| BspANI | GGCC | 1 cut(s) | 325 |
| BspCNI | CTCAG | 2 cut(s) | 4, 650 |
| BspLI | GGNNCC | 1 cut(s) | 53 |
| BspPI | GGATC | 1 cut(s) | 339 |
| BsrDI | GCAATG | 1 cut(s) | 191 |
| BssECI | CCNNGG | 1 cut(s) | 326 |
| BssMI | GATC | 2 cut(s) | 331, 392 |
| BssNI | GRCGYC | 1 cut(s) | 495 |
| BssSI | CACGAG | 1 cut(s) | 589 |
| Bst2BI | CACGAG | 1 cut(s) | 589 |
| Bst2UI | CCWGG | 1 cut(s) | 327 |
| Bst4CI | ACNGT | 2 cut(s) | 299, 633 |
| Bst6I | CTCTTC | 1 cut(s) | 465 |
| BstACI | GRCGYC | 1 cut(s) | 495 |
| BstBAI | YACGTR | 1 cut(s) | 618 |
| BstDEI | CTNAG | 3 cut(s) | 12, 535, 637 |
| BstF5I | GGATG | 1 cut(s) | 198 |
| BstKTI | GATC | 2 cut(s) | 334, 395 |
| BstMBI | GATC | 2 cut(s) | 331, 392 |
| BstNI | CCWGG | 1 cut(s) | 327 |
| BstNSI | RCATGY | 1 cut(s) | 586 |
| BstSCI | CCNGG | 1 cut(s) | 325 |
| BstSLI | GKGCMC | 1 cut(s) | 590 |
| BstSNI | TACGTA | 1 cut(s) | 618 |
| BstV2I | GAAGAC | 1 cut(s) | 9 |
| BstX2I | RGATCY | 1 cut(s) | 331 |
| BstYI | RGATCY | 1 cut(s) | 331 |
| BsuRI | GGCC | 1 cut(s) | 325 |
| BtsCI | GGATG | 1 cut(s) | 198 |
| BtsIMutI | CAGTG | 2 cut(s) | 30, 304 |
| Cfr13I | GGNCC | 1 cut(s) | 51 |
| Csp6I | GTAC | 3 cut(s) | 453, 608, 619 |
| CviAII | CATG | 5 cut(s) | 202, 254, 396, 519, 583 |
| CviJI | RGCY | 9 cut(s) | 102, 176, 250, 325, 359, 413, 548, 572, 641 |
| CviKI_1 | RGCY | 9 cut(s) | 102, 176, 250, 325, 359, 413, 548, 572, 641 |
| CviQI | GTAC | 3 cut(s) | 453, 608, 619 |
| DdeI | CTNAG | 3 cut(s) | 12, 535, 637 |
| DpnI | GATC | 2 cut(s) | 333, 394 |
| DpnII | GATC | 2 cut(s) | 331, 392 |
| Eam1104I | CTCTTC | 1 cut(s) | 465 |
| EarI | CTCTTC | 1 cut(s) | 465 |
| Ecl136II | GAGCTC | 1 cut(s) | 176 |
| Eco105I | TACGTA | 1 cut(s) | 618 |
| Eco147I | AGGCCT | 1 cut(s) | 325 |
| Eco24I | GRGCYC | 1 cut(s) | 178 |
| Eco47I | GGWCC | 1 cut(s) | 51 |
| Eco53kI | GAGCTC | 1 cut(s) | 176 |
| Eco88I | CYCGRG | 1 cut(s) | 171 |
| EcoICRI | GAGCTC | 1 cut(s) | 176 |
| EcoRII | CCWGG | 1 cut(s) | 325 |
| EcoT38I | GRGCYC | 1 cut(s) | 178 |
| FaeI | CATG | 5 cut(s) | 205, 257, 399, 522, 586 |
| FaqI | GGGAC | 1 cut(s) | 37 |
| FatI | CATG | 5 cut(s) | 201, 253, 395, 518, 582 |
| Fnu4HI | GCNGC | 1 cut(s) | 251 |
| FokI | GGATG | 1 cut(s) | 205 |
| FriOI | GRGCYC | 1 cut(s) | 178 |
| Fsp4HI | GCNGC | 1 cut(s) | 251 |
| FspBI | CTAG | 2 cut(s) | 321, 597 |
| GluI | GCNGC | 1 cut(s) | 251 |
| HaeIII | GGCC | 1 cut(s) | 325 |
| Hin1I | GRCGYC | 1 cut(s) | 495 |
| Hin1II | CATG | 5 cut(s) | 205, 257, 399, 522, 586 |
| HincII | GTYRAC | 1 cut(s) | 499 |
| HindII | GTYRAC | 1 cut(s) | 499 |
| HinfI | GANTC | 4 cut(s) | 14, 107, 242, 284 |
| Hpy166II | GTNNAC | 3 cut(s) | 499, 588, 621 |
| Hpy188I | TCNGA | 6 cut(s) | 13, 22, 121, 373, 476, 513 |
| Hpy8I | GTNNAC | 3 cut(s) | 499, 588, 621 |
| HpyAV | CCTTC | 1 cut(s) | 134 |
| HpyCH4III | ACNGT | 2 cut(s) | 299, 633 |
| HpyCH4IV | ACGT | 2 cut(s) | 495, 617 |
| HpyCH4V | TGCA | 5 cut(s) | 184, 189, 315, 577, 588 |
| HpyF3I | CTNAG | 3 cut(s) | 12, 535, 637 |
| HpySE526I | ACGT | 2 cut(s) | 495, 617 |
| Hsp92I | GRCGYC | 1 cut(s) | 495 |
| Hsp92II | CATG | 5 cut(s) | 205, 257, 399, 522, 586 |
| Kzo9I | GATC | 2 cut(s) | 331, 392 |
| LpnPI | CCDG | 4 cut(s) | 117, 175, 312, 339 |
| LweI | GCATC | 2 cut(s) | 340, 488 |
| MaeI | CTAG | 2 cut(s) | 321, 597 |
| MaeII | ACGT | 2 cut(s) | 495, 617 |
| MalI | GATC | 2 cut(s) | 333, 394 |
| MboI | GATC | 2 cut(s) | 331, 392 |
| MboII | GAAGA | 3 cut(s) | 9, 71, 452 |
| MflI | RGATCY | 1 cut(s) | 331 |
| MhlI | GDGCHC | 3 cut(s) | 178, 214, 590 |
| MluCI | AATT | 1 cut(s) | 228 |
| MlyI | GAGTC | 1 cut(s) | 23 |
| MmeI | TCCRAC | 3 cut(s) | 76, 144, 536 |
| MnlI | CCTC | 3 cut(s) | 157, 436, 597 |
| MroXI | GAANNNNTTC | 1 cut(s) | 111 |
| MseI | TTAA | 4 cut(s) | 69, 276, 306, 655 |
| MspR9I | CCNGG | 1 cut(s) | 327 |
| Mva1269I | GAATGC | 2 cut(s) | 317, 507 |
| MvaI | CCWGG | 1 cut(s) | 327 |
| NdeII | GATC | 2 cut(s) | 331, 392 |
| NlaIII | CATG | 5 cut(s) | 205, 257, 399, 522, 586 |
| NlaIV | GGNNCC | 1 cut(s) | 53 |
| NspI | RCATGY | 1 cut(s) | 586 |
| PaeR7I | CTCGAG | 1 cut(s) | 171 |
| PceI | AGGCCT | 1 cut(s) | 325 |
| PciI | ACATGT | 1 cut(s) | 582 |
| PctI | GAATGC | 2 cut(s) | 317, 507 |
| PdmI | GAANNNNTTC | 1 cut(s) | 111 |
| PfeI | GAWTC | 3 cut(s) | 107, 242, 284 |
| PkrI | GCNGC | 1 cut(s) | 252 |
| PleI | GAGTC | 1 cut(s) | 22 |
| PpsI | GAGTC | 1 cut(s) | 22 |
| Ppu21I | YACGTR | 1 cut(s) | 618 |
| PscI | ACATGT | 1 cut(s) | 582 |
| Psp124BI | GAGCTC | 1 cut(s) | 178 |
| Psp6I | CCWGG | 1 cut(s) | 325 |
| PspGI | CCWGG | 1 cut(s) | 325 |
| PspN4I | GGNNCC | 1 cut(s) | 53 |
| PspPI | GGNCC | 1 cut(s) | 51 |
| PspXI | VCTCGAGB | 1 cut(s) | 171 |
| PsuI | RGATCY | 1 cut(s) | 331 |
| RsaI | GTAC | 3 cut(s) | 454, 609, 620 |
| RsaNI | GTAC | 3 cut(s) | 453, 608, 619 |
| SacI | GAGCTC | 1 cut(s) | 178 |
| SaqAI | TTAA | 4 cut(s) | 69, 276, 306, 655 |
| SatI | GCNGC | 1 cut(s) | 251 |
| Sau3AI | GATC | 2 cut(s) | 331, 392 |
| Sau96I | GGNCC | 1 cut(s) | 51 |
| SchI | GAGTC | 1 cut(s) | 23 |
| ScrFI | CCNGG | 1 cut(s) | 327 |
| SduI | GDGCHC | 3 cut(s) | 178, 214, 590 |
| SetI | ASST | 8 cut(s) | 10, 126, 178, 361, 498, 574, 620, 643 |
| SfaNI | GCATC | 2 cut(s) | 340, 488 |
| Sfr274I | CTCGAG | 1 cut(s) | 171 |
| SinI | GGWCC | 1 cut(s) | 51 |
| SlaI | CTCGAG | 1 cut(s) | 171 |
| SmlI | CTYRAG | 1 cut(s) | 171 |
| SmoI | CTYRAG | 1 cut(s) | 171 |
| SnaBI | TACGTA | 1 cut(s) | 618 |
| Sse9I | AATT | 1 cut(s) | 228 |
| SseBI | AGGCCT | 1 cut(s) | 325 |
| SsiI | CCGC | 1 cut(s) | 251 |
| SspI | AATATT | 1 cut(s) | 134 |
| SspMI | CTAG | 2 cut(s) | 321, 597 |
| SstI | GAGCTC | 1 cut(s) | 178 |
| StuI | AGGCCT | 1 cut(s) | 325 |
| StyD4I | CCNGG | 1 cut(s) | 325 |
| TaaI | ACNGT | 2 cut(s) | 299, 633 |
| TaiI | ACGT | 2 cut(s) | 498, 620 |
| TaqI | TCGA | 3 cut(s) | 172, 208, 482 |
| TasI | AATT | 1 cut(s) | 228 |
| TauI | GCSGC | 1 cut(s) | 253 |
| TfiI | GAWTC | 3 cut(s) | 107, 242, 284 |
| Tru1I | TTAA | 4 cut(s) | 69, 276, 306, 655 |
| Tru9I | TTAA | 4 cut(s) | 69, 276, 306, 655 |
| TscAI | CASTG | 2 cut(s) | 37, 304 |
| TspDTI | ATGAA | 3 cut(s) | 87, 116, 452 |
| TspRI | CASTG | 2 cut(s) | 37, 304 |
| VneI | GTGCAC | 1 cut(s) | 586 |
| VpaK11BI | GGWCC | 1 cut(s) | 51 |
| XceI | RCATGY | 1 cut(s) | 586 |
| XhoI | CTCGAG | 1 cut(s) | 171 |
| XmnI | GAANNNNTTC | 1 cut(s) | 111 |
| XspI | CTAG | 2 cut(s) | 321, 597 |
| ZraI | GACGTC | 1 cut(s) | 496 |