TPR and ankyrin repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 86, 202 |
| AciI | CCGC | 5 cut(s) | 81, 84, 202, 314, 332 |
| AclWI | GGATC | 3 cut(s) | 82, 330, 343 |
| AcsI | RAATTY | 1 cut(s) | 190 |
| AfaI | GTAC | 1 cut(s) | 550 |
| AgsI | TTSAA | 2 cut(s) | 274, 311 |
| AjnI | CCWGG | 2 cut(s) | 15, 107 |
| AluBI | AGCT | 4 cut(s) | 140, 472, 476, 579 |
| AluI | AGCT | 4 cut(s) | 140, 472, 476, 579 |
| Alw21I | GWGCWC | 2 cut(s) | 8, 142 |
| Alw26I | GTCTC | 2 cut(s) | 106, 273 |
| AlwI | GGATC | 3 cut(s) | 82, 330, 343 |
| AoxI | GGCC | 2 cut(s) | 247, 426 |
| ApeKI | GCWGC | 3 cut(s) | 182, 491, 557 |
| ApoI | RAATTY | 1 cut(s) | 190 |
| AspA2I | CCTAGG | 1 cut(s) | 133 |
| AspLEI | GCGC | 1 cut(s) | 102 |
| AspS9I | GGNCC | 2 cut(s) | 210, 255 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 299, 402, 461, 470 |
| AsuNHI | GCTAGC | 1 cut(s) | 472 |
| AvaII | GGWCC | 2 cut(s) | 210, 255 |
| AvrII | CCTAGG | 1 cut(s) | 133 |
| BamHI | GGATCC | 1 cut(s) | 335 |
| BanII | GRGCYC | 1 cut(s) | 142 |
| Bbv12I | GWGCWC | 2 cut(s) | 8, 142 |
| BbvI | GCAGC | 3 cut(s) | 169, 478, 544 |
| BccI | CCATC | 2 cut(s) | 111, 222 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 28, 62 |
| BciT130I | CCWGG | 2 cut(s) | 17, 109 |
| BcoDI | GTCTC | 2 cut(s) | 106, 273 |
| BfaI | CTAG | 2 cut(s) | 134, 473 |
| BfmI | CTRYAG | 1 cut(s) | 492 |
| BisI | GCNGC | 5 cut(s) | 81, 84, 183, 492, 558 |
| BlnI | CCTAGG | 1 cut(s) | 133 |
| BlsI | GCNGC | 5 cut(s) | 82, 85, 184, 493, 559 |
| Bme1390I | CCNGG | 2 cut(s) | 17, 109 |
| Bme18I | GGWCC | 2 cut(s) | 210, 255 |
| BmgT120I | GGNCC | 2 cut(s) | 210, 255 |
| BmiI | GGNNCC | 2 cut(s) | 212, 337 |
| BmrFI | CCNGG | 2 cut(s) | 17, 109 |
| BmsI | GCATC | 4 cut(s) | 87, 256, 313, 593 |
| BmtI | GCTAGC | 1 cut(s) | 476 |
| BsaJI | CCNNGG | 5 cut(s) | 16, 107, 133, 327, 565 |
| BseBI | CCWGG | 2 cut(s) | 17, 109 |
| BseDI | CCNNGG | 5 cut(s) | 16, 107, 133, 327, 565 |
| BseGI | GGATG | 4 cut(s) | 103, 271, 328, 364 |
| BseMII | CTCAG | 2 cut(s) | 588, 602 |
| BseXI | GCAGC | 3 cut(s) | 169, 478, 544 |
| BseYI | CCCAGC | 1 cut(s) | 177 |
| Bsh1236I | CGCG | 2 cut(s) | 86, 202 |
| BshFI | GGCC | 2 cut(s) | 249, 428 |
| BsiHKAI | GWGCWC | 2 cut(s) | 8, 142 |
| BsmAI | GTCTC | 2 cut(s) | 106, 273 |
| BsmBI | CGTCTC | 1 cut(s) | 273 |
| BsnI | GGCC | 2 cut(s) | 249, 428 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 142 |
| Bsp143I | GATC | 3 cut(s) | 57, 87, 335 |
| BspACI | CCGC | 5 cut(s) | 81, 84, 202, 314, 332 |
| BspANI | GGCC | 2 cut(s) | 249, 428 |
| BspCNI | CTCAG | 2 cut(s) | 589, 601 |
| BspFNI | CGCG | 2 cut(s) | 86, 202 |
| BspLI | GGNNCC | 2 cut(s) | 212, 337 |
| BspMAI | CTGCAG | 1 cut(s) | 496 |
| BspOI | GCTAGC | 1 cut(s) | 476 |
| BspPI | GGATC | 3 cut(s) | 82, 330, 343 |
| BssECI | CCNNGG | 5 cut(s) | 16, 107, 133, 327, 565 |
| BssMI | GATC | 3 cut(s) | 57, 87, 335 |
| BssT1I | CCWWGG | 3 cut(s) | 133, 327, 565 |
| Bst2UI | CCWGG | 2 cut(s) | 17, 109 |
| Bst4CI | ACNGT | 3 cut(s) | 10, 46, 229 |
| BstC8I | GCNNGC | 2 cut(s) | 470, 474 |
| BstDEI | CTNAG | 2 cut(s) | 588, 597 |
| BstF5I | GGATG | 4 cut(s) | 103, 271, 328, 364 |
| BstFNI | CGCG | 2 cut(s) | 86, 202 |
| BstHHI | GCGC | 1 cut(s) | 102 |
| BstKTI | GATC | 3 cut(s) | 60, 90, 338 |
| BstMAI | GTCTC | 2 cut(s) | 106, 273 |
| BstMBI | GATC | 3 cut(s) | 57, 87, 335 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 92 |
| BstNI | CCWGG | 2 cut(s) | 17, 109 |
| BstSCI | CCNGG | 2 cut(s) | 15, 107 |
| BstSFI | CTRYAG | 1 cut(s) | 492 |
| BstUI | CGCG | 2 cut(s) | 86, 202 |
| BstV1I | GCAGC | 3 cut(s) | 169, 478, 544 |
| BstX2I | RGATCY | 1 cut(s) | 335 |
| BstYI | RGATCY | 1 cut(s) | 335 |
| BsuRI | GGCC | 2 cut(s) | 249, 428 |
| BtgZI | GCGATG | 2 cut(s) | 53, 110 |
| BtsCI | GGATG | 4 cut(s) | 103, 271, 328, 364 |
| BtsI | GCAGTG | 1 cut(s) | 552 |
| BtsIMutI | CAGTG | 2 cut(s) | 234, 552 |
| Cac8I | GCNNGC | 2 cut(s) | 470, 474 |
| CfoI | GCGC | 1 cut(s) | 102 |
| Cfr13I | GGNCC | 2 cut(s) | 210, 255 |
| Csp6I | GTAC | 1 cut(s) | 549 |
| CviAII | CATG | 1 cut(s) | 207 |
| CviQI | GTAC | 1 cut(s) | 549 |
| DdeI | CTNAG | 2 cut(s) | 588, 597 |
| DpnI | GATC | 3 cut(s) | 59, 89, 337 |
| DpnII | GATC | 3 cut(s) | 57, 87, 335 |
| DraI | TTTAAA | 1 cut(s) | 423 |
| Ecl136II | GAGCTC | 1 cut(s) | 140 |
| Eco130I | CCWWGG | 3 cut(s) | 133, 327, 565 |
| Eco147I | AGGCCT | 1 cut(s) | 428 |
| Eco24I | GRGCYC | 1 cut(s) | 142 |
| Eco32I | GATATC | 1 cut(s) | 594 |
| Eco47I | GGWCC | 2 cut(s) | 210, 255 |
| Eco53kI | GAGCTC | 1 cut(s) | 140 |
| EcoICRI | GAGCTC | 1 cut(s) | 140 |
| EcoRII | CCWGG | 2 cut(s) | 15, 107 |
| EcoRV | GATATC | 1 cut(s) | 594 |
| EcoT14I | CCWWGG | 3 cut(s) | 133, 327, 565 |
| EcoT38I | GRGCYC | 1 cut(s) | 142 |
| ErhI | CCWWGG | 3 cut(s) | 133, 327, 565 |
| Esp3I | CGTCTC | 1 cut(s) | 273 |
| FaeI | CATG | 1 cut(s) | 210 |
| FaiI | YATR | 4 cut(s) | 208, 221, 253, 533 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 59, 91 |
| FatI | CATG | 1 cut(s) | 206 |
| FauI | CCCGC | 1 cut(s) | 325 |
| Fnu4HI | GCNGC | 5 cut(s) | 81, 84, 183, 492, 558 |
| FokI | GGATG | 4 cut(s) | 90, 278, 335, 371 |
| FriOI | GRGCYC | 1 cut(s) | 142 |
| Fsp4HI | GCNGC | 5 cut(s) | 81, 84, 183, 492, 558 |
| FspBI | CTAG | 2 cut(s) | 134, 473 |
| GlaI | GCGC | 1 cut(s) | 101 |
| GluI | GCNGC | 5 cut(s) | 81, 84, 183, 492, 558 |
| GsaI | CCCAGC | 1 cut(s) | 181 |
| HaeIII | GGCC | 2 cut(s) | 249, 428 |
| HhaI | GCGC | 1 cut(s) | 102 |
| Hin1II | CATG | 1 cut(s) | 210 |
| Hin6I | GCGC | 1 cut(s) | 100 |
| HinP1I | GCGC | 1 cut(s) | 100 |
| HinfI | GANTC | 4 cut(s) | 114, 382, 528, 645 |
| HphI | GGTGA | 5 cut(s) | 16, 299, 402, 461, 470 |
| Hpy166II | GTNNAC | 1 cut(s) | 549 |
| Hpy188I | TCNGA | 4 cut(s) | 55, 591, 598, 644 |
| Hpy8I | GTNNAC | 1 cut(s) | 549 |
| Hpy99I | CGWCG | 1 cut(s) | 14 |
| HpyAV | CCTTC | 2 cut(s) | 82, 664 |
| HpyCH4III | ACNGT | 3 cut(s) | 10, 46, 229 |
| HpyCH4V | TGCA | 4 cut(s) | 302, 400, 494, 611 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 92 |
| HpyF3I | CTNAG | 2 cut(s) | 588, 597 |
| Hsp92II | CATG | 1 cut(s) | 210 |
| HspAI | GCGC | 1 cut(s) | 100 |
| Kzo9I | GATC | 3 cut(s) | 57, 87, 335 |
| LmnI | GCTCC | 2 cut(s) | 137, 190 |
| LpnPI | CCDG | 8 cut(s) | 2, 29, 94, 111, 121, 163, 482, 603 |
| Lsp1109I | GCAGC | 3 cut(s) | 169, 478, 544 |
| LweI | GCATC | 4 cut(s) | 87, 256, 313, 593 |
| MaeI | CTAG | 2 cut(s) | 134, 473 |
| MaeIII | GTNAC | 2 cut(s) | 30, 458 |
| MalI | GATC | 3 cut(s) | 59, 89, 337 |
| MboI | GATC | 3 cut(s) | 57, 87, 335 |
| MboII | GAAGA | 2 cut(s) | 67, 397 |
| MflI | RGATCY | 1 cut(s) | 335 |
| MhlI | GDGCHC | 2 cut(s) | 8, 142 |
| MluCI | AATT | 5 cut(s) | 144, 190, 317, 401, 603 |
| MlyI | GAGTC | 1 cut(s) | 108 |
| MseI | TTAA | 1 cut(s) | 422 |
| MspR9I | CCNGG | 2 cut(s) | 17, 109 |
| MvaI | CCWGG | 2 cut(s) | 17, 109 |
| MvnI | CGCG | 2 cut(s) | 86, 202 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 92 |
| NdeII | GATC | 3 cut(s) | 57, 87, 335 |
| NheI | GCTAGC | 1 cut(s) | 472 |
| NlaIII | CATG | 1 cut(s) | 210 |
| NlaIV | GGNNCC | 2 cut(s) | 212, 337 |
| NmuCI | GTSAC | 2 cut(s) | 30, 458 |
| PceI | AGGCCT | 1 cut(s) | 428 |
| PfeI | GAWTC | 3 cut(s) | 382, 528, 645 |
| PkrI | GCNGC | 5 cut(s) | 82, 85, 184, 493, 559 |
| PleI | GAGTC | 1 cut(s) | 108 |
| PpsI | GAGTC | 1 cut(s) | 108 |
| Psp124BI | GAGCTC | 1 cut(s) | 142 |
| Psp6I | CCWGG | 2 cut(s) | 15, 107 |
| PspFI | CCCAGC | 1 cut(s) | 177 |
| PspGI | CCWGG | 2 cut(s) | 15, 107 |
| PspN4I | GGNNCC | 2 cut(s) | 212, 337 |
| PspPI | GGNCC | 2 cut(s) | 210, 255 |
| PstI | CTGCAG | 1 cut(s) | 496 |
| PsuI | RGATCY | 1 cut(s) | 335 |
| RsaI | GTAC | 1 cut(s) | 550 |
| RsaNI | GTAC | 1 cut(s) | 549 |
| SacI | GAGCTC | 1 cut(s) | 142 |
| SaqAI | TTAA | 1 cut(s) | 422 |
| SatI | GCNGC | 5 cut(s) | 81, 84, 183, 492, 558 |
| Sau3AI | GATC | 3 cut(s) | 57, 87, 335 |
| Sau96I | GGNCC | 2 cut(s) | 210, 255 |
| SchI | GAGTC | 1 cut(s) | 108 |
| ScrFI | CCNGG | 2 cut(s) | 17, 109 |
| SduI | GDGCHC | 2 cut(s) | 8, 142 |
| SetI | ASST | 7 cut(s) | 74, 142, 474, 478, 514, 581, 622 |
| SfaNI | GCATC | 4 cut(s) | 87, 256, 313, 593 |
| SfcI | CTRYAG | 1 cut(s) | 492 |
| SinI | GGWCC | 2 cut(s) | 210, 255 |
| Sse9I | AATT | 5 cut(s) | 144, 190, 317, 401, 603 |
| SseBI | AGGCCT | 1 cut(s) | 428 |
| SsiI | CCGC | 5 cut(s) | 81, 84, 202, 314, 332 |
| SspMI | CTAG | 2 cut(s) | 134, 473 |
| SstI | GAGCTC | 1 cut(s) | 142 |
| StuI | AGGCCT | 1 cut(s) | 428 |
| StyD4I | CCNGG | 2 cut(s) | 15, 107 |
| StyI | CCWWGG | 3 cut(s) | 133, 327, 565 |
| TaaI | ACNGT | 3 cut(s) | 10, 46, 229 |
| TasI | AATT | 5 cut(s) | 144, 190, 317, 401, 603 |
| TauI | GCSGC | 2 cut(s) | 83, 86 |
| TfiI | GAWTC | 3 cut(s) | 382, 528, 645 |
| Tru1I | TTAA | 1 cut(s) | 422 |
| Tru9I | TTAA | 1 cut(s) | 422 |
| TscAI | CASTG | 2 cut(s) | 234, 559 |
| TseFI | GTSAC | 2 cut(s) | 30, 458 |
| TseI | GCWGC | 3 cut(s) | 182, 491, 557 |
| Tsp45I | GTSAC | 2 cut(s) | 30, 458 |
| TspDTI | ATGAA | 5 cut(s) | 309, 378, 381, 513, 622 |
| TspRI | CASTG | 2 cut(s) | 234, 559 |
| VpaK11BI | GGWCC | 2 cut(s) | 210, 255 |
| XapI | RAATTY | 1 cut(s) | 190 |
| XmaJI | CCTAGG | 1 cut(s) | 133 |
| XspI | CTAG | 2 cut(s) | 134, 473 |