Rh4CG454600

TPR and ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
68735315 .. 68757031
21717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG454600.1

Sequence Viewer

Length: 1998 bp
ATGGAAAAGTTTCCACAACAGGAGGAGCTTCTGACAAAGGCCAAGTCATTTGCCAAGAATGTGAAAGATAACGTTTATGAGCTGGTTTGTGCCGAGTCGGAGATTTTATTGAATGGGCAGGATAACTTGGCTGTTTTGAAACATCAAATGGATGCTTCTGAAAGACTTGAGAGTATTAGAGGTGAAGTGTTATCAGCTCGTAAAATTTTGGACGCCCATCTCTCTCCAAGAACTGATAAGTATTTATGGGAGAAAGAATTAATTGGAGATCTTGTAAAGCATTCAAAAGATAAAATATCTAGAAATCAGGTGTCCATTGATTCGCTTGTCTACTACTGGAATTTCTGGAAGGCGAAGATCCTTCACATTATTGAATCTGTAGGATGTGTGGAAACTCCAGAGTACAATAGTTATGTAGAACTCTGTTTTACTTGTTTAGGAGTTTGGAGGTTGTATCATAATCTGAATCCAATCTATGTTTTACTGGTCCCTGATGCTGATTGGGTTAGAGGTCTGGACAAAAGGCATTTGAAAAGTTATGGGAAGTTGGTCTCCATTGATGTTCATCAGCTCATTCCAGCAGCTCAGTATTATTGGAGTTCAGAACTGCTCTCTGTTGGCATCAAAGTTTTGGAAAAGCTTGAAGCACTCTTCAAGTTCCCACTAAAGAATTCCGACTCGACATTCTTCCAGTGCAGGGCTCTTACCCTTATCTATGATGTTGCAAGAAATCTTTTGGATTCCAAATGTCTGAAGCCAAGGCATCATGATTACTTGACACTACAGAAGCTGGTAACATTTTCGACTAGGGAGTATGTTGCTTACATCTTTCCTTTAGATTGGAGGAATTCGTTGAGACAGAATATGATTTCTCTTAGAAGAACTGATGCTTCAAAGAATGTGCTGAATCAAGTTATAGTTGAATATACCAGCTCGAAGAACGAGCTGTCTTATGGGCAGATTGGAAGGATCGCAATGATCATTCTCGGGTCAGGTAAGCTGCTGAATACTGAGCTCTCTCTTCAGCTTGTGAAAAAGCTTGAAATCAATACACCATGGAAGGCCTTCATTGAGAATCTCTGTGCGAGCGTGGGACCTGGACATACCCGTCAGGAACCAATAGAGGTGTCTGTCATGTGGCGGTTACATGAGGCTTTGGTTGAAACTTATAGTGTCAACTGGAGGAAGGTTTCCGACTACATATCACCTGGTTGCTTCTTGTATCTTGTGGAGCGCCATCTGTTTTCAGCAAGTTGCTTTCAAGGTTTTGTCATCACTACAAGTTCTTGCTTTATTGAGTGGCTGATATACCAGGATGAAGATACCAGCTTACGTTCCATAGTGACTGGTGGGCGTCCTTCTCTGGAAACGATTCTTCCATTTGTGATTACCGTGGTTCGCGAGTGTATTTTTAAGAAGAAGGATATGATTGAATGGATTGAGAAGTCTGACAGAAATTGGAGGAAGTACTATCAGTCACTCATGTTGCGGTTGGTTACTGTCTTGTGTTTGACTAATTTGAACTTTGGCTTGTGTTTGGATATAATCCATGATTTGCTGGGGAGGAACTTTATCACCGAACTCCTACCATGGGAGTTTTATGATGCACTTAGGAGGAGGAGGAAACACAATTCTCTCATTTTAAATGTGAATGTGCTTGCTGGAGCTCTCAAGAAGATTGATAATACTTTGGTGATTGCGAGTTTCGGGGCTAATTGTTCAAGGTTTTACTGTTCGGATGCCATCTTTGTCGACATGACGGCCAACCAATGCATGGATGACATATTGAGAAAATGGTTTCCAAAGCCGCCTGTCATTCAAGTTGCACAACATCAAGTTGCATCTGTTGAAGCTGAAGGTAGAAGTTCTTGCAGTCGTGCACTCTCTGCAACTGATTCTGAAGAAGGTAAGAGTTCTAAACTTGCGCCTTCAGAATCCAGCTTGGTAAAAGAGACTGCTGTTGCAGCTGACCAAGTACTTGAACAAGTTCTAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

665

Amino Acids

76.36

Weight (kDa)

7.79

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000223)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26390 FvH4_1g26391 FvH4_2g00700 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36210 FvH4_4g36221 FvH4_4g36250 FvH4_4g36250 FvH4_4g36250 FvH4_4g36280 FvH4_4g36280 FvH4_5g34990
malus_domestica MD09G1274800.v1.1 MD09G1274900.v1.1 MD09G1275500.v1.1 MD13G1010700.v1.1 MD16G1270700.v1.1
prunus_persica Prupe.1G087400_v2.0.a1 Prupe.1G134300_v2.0.a1 Prupe.1G215600_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G342300_v2.0.a1 Prupe.8G106200_v2.0.a1 Prupe.8G106200_v2.0.a1
pyrus_communis pycom09g18530 pycom09g18550 pycom09g18590 pycom13g00880 pycom16g24010
rosa_chinensis RchiOBHm_Chr2g0116911 RchiOBHm_Chr2g0116921 RchiOBHm_Chr3g0486161 RchiOBHm_Chr3g0486171 RchiOBHm_Chr4g0445931 RchiOBHm_Chr4g0445961 RchiOBHm_Chr4g0445971 RchiOBHm_Chr4g0445991 RchiOBHm_Chr4g0446001 RchiOBHm_Chr4g0446011 RchiOBHm_Chr4g0446031
rosa_laevigata RLG00000002343 RLG00000005696 RLG00000005698 RLG00000005699 RLG00000005701 RLG00000005703 RLG00000018313 RLG00000023096 RLG00000023099
rosa_multiflora Rmu_co8408865.1_g000001 Rmu_co8420123.1_g000001 Rmu_sc0000372.1_g000002 Rmu_sc0003001.1_g000002 Rmu_sc0003001.1_g000003 Rmu_sc0003001.1_g000006 Rmu_sc0003001.1_g000007 Rmu_sc0006315.1_g000012 Rmu_sc0007511.1_g000001 Rmu_sc0008543.1_g000001 Rmu_sc0009534.1_g000001 Rmu_sc0024967.1_g000001 Rmu_sc0036469.1_g000001 Rmu_ssc0000238.1_g000032
rosa_roxburghii Rroxscaffold_2G00126890 Rroxscaffold_5G00386350 Rroxscaffold_5G00386360 Rroxscaffold_5G00386370 Rroxscaffold_5G00386380 Rroxscaffold_5G00386400 Rroxscaffold_5G00386410 Rroxscaffold_5G00386430 Rroxscaffold_5G00386440 Rroxscaffold_6G00396020
rosa_rugosa Rorug03G0223800 Rorug03G0223800 Rorug03G0223800 Rorug04G0366100 Rorug04G0366200 Rorug04G0366300 Rorug04G0366400 Rorug04G0366500 Rorug04G0366600 Rorug04G0366600 Rorug04G0366700 Rorug04G0366700
rosa_samantha Rh1AG167300 Rh2AG265000 Rh2BG276500 Rh2DG272400 Rh2DG291200 Rh2DG291300 Rh2DG291400 Rh3AG273600 Rh3AG273700 Rh3BG308800 Rh3BG309000 Rh3CG307200 Rh3DG303500 Rh4AG427400 Rh4AG427700 Rh4AG427800 Rh4AG427900 Rh4AG428000 Rh4AG428300 Rh4AG428400 Rh4AG428500 Rh4AG428600 Rh4AG428700 Rh4BG426000 Rh4BG437600 Rh4BG437800 Rh4BG437900 Rh4BG438100 Rh4CG454300 Rh4CG454500 Rh4CG454600 Rh4CG454700 Rh4CG454800 Rh4CG454900 Rh4CG455200 Rh4CG455500 Rh4DG435700 Rh4DG435800 Rh4DG435900 Rh4DG436000 Rh4DG436100 Rh4DG436300 Rh4DG436600
rosa_wichuraiana Rw2G020880 Rw3G024250 Rw4G036590 Rw4G036600 Rw4G036620 Rw4G036630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1107
AccB7I CCANNNNNTGG 1 cut(s) 1774
AccI GTMKAC 2 cut(s) 330, 1752
AccII CGCG 1 cut(s) 1401
AciI CCGC 3 cut(s) 1141, 1489, 1808
AclI AACGTT 1 cut(s) 72
AclWI GGATC 2 cut(s) 352, 977
AcoI YGGCCR 1 cut(s) 1761
AcsI RAATTY 4 cut(s) 204, 340, 670, 847
AcuI CTGAAG 5 cut(s) 773, 1007, 1875, 1914, 1920
AcyI GRCGYC 2 cut(s) 213, 1354
AfaI GTAC 3 cut(s) 404, 1469, 1977
AfiI CCNNNNNNNGG 3 cut(s) 697, 1591, 1774
AjnI CCWGG 3 cut(s) 1096, 1207, 1311
Alw21I GWGCWC 3 cut(s) 1017, 1669, 1882
Alw26I GTCTC 3 cut(s) 556, 850, 1946
Alw44I GTGCAC 1 cut(s) 1878
AlwI GGATC 2 cut(s) 352, 977
AlwNI CAGNNNCTG 1 cut(s) 790
Ama87I CYCGRG 1 cut(s) 986
AoxI GGCC 3 cut(s) 39, 1062, 1761
ApaLI GTGCAC 1 cut(s) 1878
ApeKI GCWGC 3 cut(s) 581, 1000, 1964
ApoI RAATTY 4 cut(s) 204, 340, 670, 847
ArsI GACNNNNNNTTYG 2 cut(s) 29, 61
AseI ATTAAT 1 cut(s) 260
Asp700I GAANNNNTTC 4 cut(s) 9, 1064, 1371, 1986
AspLEI GCGC 2 cut(s) 1236, 1927
AspS9I GGNCC 2 cut(s) 487, 1094
AsuHPI GGTGA 4 cut(s) 194, 1197, 1567, 1705
AvaI CYCGRG 1 cut(s) 986
AvaII GGWCC 2 cut(s) 487, 1094
BaeGI GKGCMC 1 cut(s) 1882
BanII GRGCYC 3 cut(s) 703, 1017, 1669
Bbv12I GWGCWC 3 cut(s) 1017, 1669, 1882
BbvI GCAGC 3 cut(s) 593, 987, 1976
BccI CCATC 3 cut(s) 225, 1245, 1751
BceAI ACGGC 1 cut(s) 1776
BciT130I CCWGG 3 cut(s) 1098, 1209, 1313
BclI TGATCA 1 cut(s) 978
BcoDI GTCTC 3 cut(s) 556, 850, 1946
BfaI CTAG 3 cut(s) 300, 807, 1991
BfmI CTRYAG 2 cut(s) 378, 782
BfoI RGCGCY 1 cut(s) 1237
BglII AGATCT 1 cut(s) 268
BisI GCNGC 4 cut(s) 582, 1001, 1808, 1965
BlsI GCNGC 4 cut(s) 583, 1002, 1809, 1966
BmcAI AGTACT 2 cut(s) 1469, 1977
Bme1390I CCNGG 3 cut(s) 1098, 1209, 1313
Bme18I GGWCC 2 cut(s) 487, 1094
BmeT110I CYCGRG 1 cut(s) 986
BmgT120I GGNCC 2 cut(s) 487, 1094
BmiI GGNNCC 3 cut(s) 489, 1095, 1116
BmrFI CCNGG 3 cut(s) 1098, 1209, 1313
BmsI GCATC 8 cut(s) 142, 484, 630, 772, 877, 1594, 1729, 1850
BpmI CTGGAG 3 cut(s) 381, 1201, 1683
BpuEI CTTGAG 2 cut(s) 188, 1655
BsaBI GATNNNNATC 1 cut(s) 564
BsaHI GRCGYC 2 cut(s) 213, 1354
BsaI GGTCTC 1 cut(s) 556
BsaJI CCNNGG 4 cut(s) 758, 1055, 1392, 1589
BsaXI ACNNNNNCTCC 2 cut(s) 258, 288
Bsc4I CCNNNNNNNGG 3 cut(s) 697, 1591, 1774
Bse1I ACTGG 5 cut(s) 341, 489, 691, 1184, 1351
Bse3DI GCAATG 1 cut(s) 981
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 3 cut(s) 1098, 1209, 1313
BseDI CCNNGG 4 cut(s) 758, 1055, 1392, 1589
BseGI GGATG 5 cut(s) 157, 389, 1321, 1744, 1783
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 3 cut(s) 697, 1591, 1774
BseMI GCAATG 1 cut(s) 981
BseMII CTCAG 2 cut(s) 599, 1002
BseNI ACTGG 5 cut(s) 341, 489, 691, 1184, 1351
BseRI GAGGAG 3 cut(s) 38, 1630, 1633
BseSI GKGCMC 1 cut(s) 1882
BseXI GCAGC 3 cut(s) 593, 987, 1976
BseYI CCCAGC 1 cut(s) 1558
BsgI GTGCAG 1 cut(s) 715
Bsh1236I CGCG 1 cut(s) 1401
BshFI GGCC 3 cut(s) 41, 1064, 1763
BsiHKAI GWGCWC 3 cut(s) 1017, 1669, 1882
BsiHKCI CYCGRG 1 cut(s) 986
BslFI GGGAC 2 cut(s) 473, 1107
BslI CCNNNNNNNGG 3 cut(s) 697, 1591, 1774
BsmAI GTCTC 3 cut(s) 556, 850, 1946
BsmFI GGGAC 2 cut(s) 473, 1107
BsmI GAATGC 1 cut(s) 280
BsnI GGCC 3 cut(s) 41, 1064, 1763
Bso31I GGTCTC 1 cut(s) 556
BsoBI CYCGRG 1 cut(s) 986
Bsp1286I GDGCHC 4 cut(s) 703, 1017, 1669, 1882
Bsp143I GATC 4 cut(s) 268, 357, 969, 978
Bsp19I CCATGG 2 cut(s) 1055, 1589
Bsp68I TCGCGA 1 cut(s) 1401
BspACI CCGC 3 cut(s) 1141, 1489, 1808
BspANI GGCC 3 cut(s) 41, 1064, 1763
BspCNI CTCAG 2 cut(s) 598, 1003
BspFNI CGCG 1 cut(s) 1401
BspHI TCATGA 1 cut(s) 766
BspLI GGNNCC 3 cut(s) 489, 1095, 1116
BspPI GGATC 2 cut(s) 352, 977
BspTNI GGTCTC 1 cut(s) 556
BsrDI GCAATG 1 cut(s) 981
BsrI ACTGG 5 cut(s) 341, 489, 691, 1184, 1351
BssECI CCNNGG 4 cut(s) 758, 1055, 1392, 1589
BssMI GATC 4 cut(s) 268, 357, 969, 978
BssNI GRCGYC 2 cut(s) 213, 1354
BssT1I CCWWGG 3 cut(s) 758, 1055, 1589
Bst2UI CCWGG 3 cut(s) 1098, 1209, 1313
Bst4CI ACNGT 3 cut(s) 1393, 1501, 1733
Bst6I CTCTTC 2 cut(s) 656, 1026
BstACI GRCGYC 2 cut(s) 213, 1354
BstAPI GCANNNNNTGC 1 cut(s) 1886
BstC8I GCNNGC 2 cut(s) 1087, 1659
BstDEI CTNAG 4 cut(s) 585, 875, 1011, 1610
BstDSI CCRYGG 3 cut(s) 1055, 1392, 1589
BstF5I GGATG 5 cut(s) 157, 389, 1321, 1744, 1783
BstFNI CGCG 1 cut(s) 1401
BstH2I RGCGCY 1 cut(s) 1237
BstHHI GCGC 2 cut(s) 1236, 1927
BstKTI GATC 4 cut(s) 271, 360, 972, 981
BstMAI GTCTC 3 cut(s) 556, 850, 1946
BstMBI GATC 4 cut(s) 268, 357, 969, 978
BstMWI GCNNNNNNNGC 2 cut(s) 1886, 1964
BstNI CCWGG 3 cut(s) 1098, 1209, 1313
BstSCI CCNGG 3 cut(s) 1096, 1207, 1311
BstSFI CTRYAG 2 cut(s) 378, 782
BstSLI GKGCMC 1 cut(s) 1882
BstUI CGCG 1 cut(s) 1401
BstV1I GCAGC 3 cut(s) 593, 987, 1976
BstX2I RGATCY 2 cut(s) 268, 357
BstYI RGATCY 2 cut(s) 268, 357
BsuRI GGCC 3 cut(s) 41, 1064, 1763
BtgI CCRYGG 3 cut(s) 1055, 1392, 1589
BtsCI GGATG 5 cut(s) 157, 389, 1321, 1744, 1783
BtsIMutI CAGTG 1 cut(s) 698
BtuMI TCGCGA 1 cut(s) 1401
Cac8I GCNNGC 2 cut(s) 1087, 1659
CaiI CAGNNNCTG 1 cut(s) 790
CciI TCATGA 1 cut(s) 766
CfoI GCGC 2 cut(s) 1236, 1927
Cfr13I GGNCC 2 cut(s) 487, 1094
CseI GACGC 2 cut(s) 221, 1343
CsiI ACCWGGT 1 cut(s) 1207
Csp6I GTAC 3 cut(s) 403, 1468, 1976
CviAII CATG 9 cut(s) 767, 1056, 1135, 1148, 1483, 1550, 1590, 1756, 1774
CviQI GTAC 3 cut(s) 403, 1468, 1976
DdeI CTNAG 4 cut(s) 585, 875, 1011, 1610
DpnI GATC 4 cut(s) 270, 359, 971, 980
DpnII GATC 4 cut(s) 268, 357, 969, 978
DraI TTTAAA 1 cut(s) 1644
DrdI GACNNNNNNGTC 1 cut(s) 1107
DseDI GACNNNNNNGTC 1 cut(s) 1107
EaeI YGGCCR 1 cut(s) 1761
Eam1104I CTCTTC 2 cut(s) 656, 1026
EarI CTCTTC 2 cut(s) 656, 1026
Ecl136II GAGCTC 2 cut(s) 1015, 1667
Eco130I CCWWGG 3 cut(s) 758, 1055, 1589
Eco147I AGGCCT 1 cut(s) 1064
Eco24I GRGCYC 3 cut(s) 703, 1017, 1669
Eco31I GGTCTC 1 cut(s) 556
Eco47I GGWCC 2 cut(s) 487, 1094
Eco53kI GAGCTC 2 cut(s) 1015, 1667
Eco57I CTGAAG 5 cut(s) 773, 1007, 1875, 1914, 1920
Eco88I CYCGRG 1 cut(s) 986
EcoICRI GAGCTC 2 cut(s) 1015, 1667
EcoO109I RGGNCCY 1 cut(s) 1094
EcoRI GAATTC 2 cut(s) 670, 847
EcoRII CCWGG 3 cut(s) 1096, 1207, 1311
EcoT14I CCWWGG 3 cut(s) 758, 1055, 1589
EcoT22I ATGCAT 1 cut(s) 1775
EcoT38I GRGCYC 3 cut(s) 703, 1017, 1669
ErhI CCWWGG 3 cut(s) 758, 1055, 1589
FaeI CATG 9 cut(s) 770, 1059, 1138, 1151, 1486, 1553, 1593, 1759, 1777
FaqI GGGAC 2 cut(s) 473, 1107
FatI CATG 9 cut(s) 766, 1055, 1134, 1147, 1482, 1549, 1589, 1755, 1773
FbaI TGATCA 1 cut(s) 978
FblI GTMKAC 2 cut(s) 330, 1752
Fnu4HI GCNGC 4 cut(s) 582, 1001, 1808, 1965
FokI GGATG 5 cut(s) 164, 396, 1328, 1751, 1790
FriOI GRGCYC 3 cut(s) 703, 1017, 1669
Fsp4HI GCNGC 4 cut(s) 582, 1001, 1808, 1965
FspBI CTAG 3 cut(s) 300, 807, 1991
GlaI GCGC 2 cut(s) 1235, 1926
GluI GCNGC 4 cut(s) 582, 1001, 1808, 1965
GsaI CCCAGC 1 cut(s) 1562
GsuI CTGGAG 3 cut(s) 381, 1201, 1683
HaeII RGCGCY 1 cut(s) 1237
HaeIII GGCC 3 cut(s) 41, 1064, 1763
HgaI GACGC 2 cut(s) 221, 1343
HhaI GCGC 2 cut(s) 1236, 1927
Hin1I GRCGYC 2 cut(s) 213, 1354
Hin1II CATG 9 cut(s) 770, 1059, 1138, 1151, 1486, 1553, 1593, 1759, 1777
Hin6I GCGC 2 cut(s) 1234, 1925
HinP1I GCGC 2 cut(s) 1234, 1925
HincII GTYRAC 2 cut(s) 1177, 1753
HindII GTYRAC 2 cut(s) 1177, 1753
HindIII AAGCTT 2 cut(s) 638, 1037
HphI GGTGA 4 cut(s) 194, 1197, 1567, 1705
Hpy166II GTNNAC 4 cut(s) 331, 1177, 1753, 1880
Hpy8I GTNNAC 4 cut(s) 331, 1177, 1753, 1880
HpyCH4III ACNGT 3 cut(s) 1393, 1501, 1733
HpyCH4IV ACGT 2 cut(s) 72, 1333
HpyF10VI GCNNNNNNNGC 2 cut(s) 1886, 1964
HpyF3I CTNAG 4 cut(s) 585, 875, 1011, 1610
HpySE526I ACGT 2 cut(s) 72, 1333
Hsp92I GRCGYC 2 cut(s) 213, 1354
Hsp92II CATG 9 cut(s) 770, 1059, 1138, 1151, 1486, 1553, 1593, 1759, 1777
HspAI GCGC 2 cut(s) 1234, 1925
Ksp22I TGATCA 1 cut(s) 978
Kzo9I GATC 4 cut(s) 268, 357, 969, 978
LmnI GCTCC 3 cut(s) 25, 1231, 1664
Lsp1109I GCAGC 3 cut(s) 593, 987, 1976
LweI GCATC 8 cut(s) 142, 484, 630, 772, 877, 1594, 1729, 1850
MabI ACCWGGT 1 cut(s) 1207
MaeI CTAG 3 cut(s) 300, 807, 1991
MaeII ACGT 2 cut(s) 72, 1333
MaeIII GTNAC 5 cut(s) 793, 1143, 1342, 1476, 1495
MalI GATC 4 cut(s) 270, 359, 971, 980
MboI GATC 4 cut(s) 268, 357, 969, 978
MflI RGATCY 2 cut(s) 268, 357
MhlI GDGCHC 4 cut(s) 703, 1017, 1669, 1882
MlyI GAGTC 2 cut(s) 104, 671
MmeI TCCRAC 3 cut(s) 78, 699, 1218
Mph1103I ATGCAT 1 cut(s) 1775
MroXI GAANNNNTTC 4 cut(s) 9, 1064, 1371, 1986
MseI TTAA 3 cut(s) 260, 1413, 1643
MspA1I CMGCKG 1 cut(s) 1967
MspR9I CCNGG 3 cut(s) 1098, 1209, 1313
Mva1269I GAATGC 1 cut(s) 280
MvaI CCWGG 3 cut(s) 1098, 1209, 1313
MvnI CGCG 1 cut(s) 1401
MwoI GCNNNNNNNGC 2 cut(s) 1886, 1964
NcoI CCATGG 2 cut(s) 1055, 1589
NdeII GATC 4 cut(s) 268, 357, 969, 978
NlaIII CATG 9 cut(s) 770, 1059, 1138, 1151, 1486, 1553, 1593, 1759, 1777
NlaIV GGNNCC 3 cut(s) 489, 1095, 1116
NmeAIII GCCGAG 1 cut(s) 118
NmuCI GTSAC 2 cut(s) 1342, 1476
NruI TCGCGA 1 cut(s) 1401
NsiI ATGCAT 1 cut(s) 1775
PagI TCATGA 1 cut(s) 766
PceI AGGCCT 1 cut(s) 1064
PctI GAATGC 1 cut(s) 280
PdmI GAANNNNTTC 4 cut(s) 9, 1064, 1371, 1986
PfeI GAWTC 9 cut(s) 320, 374, 466, 740, 907, 1075, 1372, 1895, 1934
PflMI CCANNNNNTGG 1 cut(s) 1774
PkrI GCNGC 4 cut(s) 583, 1002, 1809, 1966
PleI GAGTC 2 cut(s) 103, 671
PpsI GAGTC 2 cut(s) 103, 671
PpuMI RGGWCCY 1 cut(s) 1094
PshBI ATTAAT 1 cut(s) 260
Psp124BI GAGCTC 2 cut(s) 1017, 1669
Psp1406I AACGTT 1 cut(s) 72
Psp5II RGGWCCY 1 cut(s) 1094
Psp6I CCWGG 3 cut(s) 1096, 1207, 1311
PspFI CCCAGC 1 cut(s) 1558
PspGI CCWGG 3 cut(s) 1096, 1207, 1311
PspN4I GGNNCC 3 cut(s) 489, 1095, 1116
PspPI GGNCC 2 cut(s) 487, 1094
PspPPI RGGWCCY 1 cut(s) 1094
PstNI CAGNNNCTG 1 cut(s) 790
PsuI RGATCY 2 cut(s) 268, 357
PvuII CAGCTG 1 cut(s) 1967
RruI TCGCGA 1 cut(s) 1401
RsaI GTAC 3 cut(s) 404, 1469, 1977
RsaNI GTAC 3 cut(s) 403, 1468, 1976
SacI GAGCTC 2 cut(s) 1017, 1669
SalI GTCGAC 1 cut(s) 1751
SaqAI TTAA 3 cut(s) 260, 1413, 1643
SatI GCNGC 4 cut(s) 582, 1001, 1808, 1965
Sau3AI GATC 4 cut(s) 268, 357, 969, 978
Sau96I GGNCC 2 cut(s) 487, 1094
ScaI AGTACT 2 cut(s) 1469, 1977
SchI GAGTC 2 cut(s) 104, 671
ScrFI CCNGG 3 cut(s) 1098, 1209, 1313
SduI GDGCHC 4 cut(s) 703, 1017, 1669, 1882
SexAI ACCWGGT 1 cut(s) 1207
SfaNI GCATC 8 cut(s) 142, 484, 630, 772, 877, 1594, 1729, 1850
SfcI CTRYAG 2 cut(s) 378, 782
SinI GGWCC 2 cut(s) 487, 1094
SmlI CTYRAG 2 cut(s) 167, 1670
SmoI CTYRAG 2 cut(s) 167, 1670
SseBI AGGCCT 1 cut(s) 1064
SsiI CCGC 3 cut(s) 1141, 1489, 1808
SspMI CTAG 3 cut(s) 300, 807, 1991
SstI GAGCTC 2 cut(s) 1017, 1669
StuI AGGCCT 1 cut(s) 1064
StyD4I CCNGG 3 cut(s) 1096, 1207, 1311
StyI CCWWGG 3 cut(s) 758, 1055, 1589
TaaI ACNGT 3 cut(s) 1393, 1501, 1733
TaiI ACGT 2 cut(s) 75, 1336
TaqI TCGA 4 cut(s) 680, 803, 935, 1752
TatI WGTACW 3 cut(s) 402, 1467, 1975
TauI GCSGC 1 cut(s) 1810
TfiI GAWTC 9 cut(s) 320, 374, 466, 740, 907, 1075, 1372, 1895, 1934
Tru1I TTAA 3 cut(s) 260, 1413, 1643
Tru9I TTAA 3 cut(s) 260, 1413, 1643
TscAI CASTG 1 cut(s) 698
TseFI GTSAC 2 cut(s) 1342, 1476
TseI GCWGC 3 cut(s) 581, 1000, 1964
Tsp45I GTSAC 2 cut(s) 1342, 1476
TspDTI ATGAA 3 cut(s) 554, 1057, 1332
TspRI CASTG 1 cut(s) 698
Van91I CCANNNNNTGG 1 cut(s) 1774
VneI GTGCAC 1 cut(s) 1878
VpaK11BI GGWCC 2 cut(s) 487, 1094
VspI ATTAAT 1 cut(s) 260
XapI RAATTY 4 cut(s) 204, 340, 670, 847
XbaI TCTAGA 2 cut(s) 299, 1990
XcmI CCANNNNNNNNNTGG 1 cut(s) 1771
XmiI GTMKAC 2 cut(s) 330, 1752
XmnI GAANNNNTTC 4 cut(s) 9, 1064, 1371, 1986
XspI CTAG 3 cut(s) 300, 807, 1991
ZrmI AGTACT 2 cut(s) 1469, 1977
Zsp2I ATGCAT 1 cut(s) 1775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.