TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 647 |
| AciI | CCGC | 2 cut(s) | 605, 746 |
| AcoI | YGGCCR | 1 cut(s) | 713 |
| AcsI | RAATTY | 1 cut(s) | 401 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 317, 376 |
| AgsI | TTSAA | 2 cut(s) | 105, 185 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 615, 647 |
| AluBI | AGCT | 3 cut(s) | 50, 522, 774 |
| AluI | AGCT | 3 cut(s) | 50, 522, 774 |
| Alw26I | GTCTC | 1 cut(s) | 269 |
| Ama87I | CYCGRG | 1 cut(s) | 561 |
| AoxI | GGCC | 3 cut(s) | 606, 713, 729 |
| ApeKI | GCWGC | 2 cut(s) | 749, 771 |
| ApoI | RAATTY | 1 cut(s) | 401 |
| AspA2I | CCTAGG | 1 cut(s) | 296 |
| AspS9I | GGNCC | 1 cut(s) | 337 |
| AvaI | CYCGRG | 1 cut(s) | 561 |
| AvaII | GGWCC | 1 cut(s) | 337 |
| AvrII | CCTAGG | 1 cut(s) | 296 |
| BalI | TGGCCA | 1 cut(s) | 715 |
| BbsI | GAAGAC | 1 cut(s) | 149 |
| BbvCI | CCTCAGC | 1 cut(s) | 460 |
| BbvI | GCAGC | 1 cut(s) | 736 |
| BccI | CCATC | 1 cut(s) | 425 |
| BclI | TGATCA | 1 cut(s) | 202 |
| BcoDI | GTCTC | 1 cut(s) | 269 |
| BfaI | CTAG | 3 cut(s) | 297, 677, 775 |
| BfmI | CTRYAG | 1 cut(s) | 132 |
| BisI | GCNGC | 4 cut(s) | 606, 747, 750, 772 |
| BlnI | CCTAGG | 1 cut(s) | 296 |
| BlsI | GCNGC | 4 cut(s) | 607, 748, 751, 773 |
| Bme18I | GGWCC | 1 cut(s) | 337 |
| BmeT110I | CYCGRG | 1 cut(s) | 561 |
| BmgT120I | GGNCC | 1 cut(s) | 337 |
| BmiI | GGNNCC | 1 cut(s) | 699 |
| BmsI | GCATC | 4 cut(s) | 376, 445, 582, 733 |
| BoxI | GACNNNNGTC | 1 cut(s) | 506 |
| BpiI | GAAGAC | 1 cut(s) | 149 |
| Bpu10I | CCTNAGC | 1 cut(s) | 460 |
| BsaI | GGTCTC | 1 cut(s) | 269 |
| BsaJI | CCNNGG | 3 cut(s) | 214, 279, 296 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 689, 719 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 317, 376 |
| Bse118I | RCCGGY | 1 cut(s) | 767 |
| Bse1I | ACTGG | 2 cut(s) | 352, 760 |
| BseDI | CCNNGG | 3 cut(s) | 214, 279, 296 |
| BseGI | GGATG | 1 cut(s) | 436 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 317, 376 |
| BseMII | CTCAG | 3 cut(s) | 184, 474, 563 |
| BseNI | ACTGG | 2 cut(s) | 352, 760 |
| BseRI | GAGGAG | 3 cut(s) | 287, 454, 697 |
| BseXI | GCAGC | 1 cut(s) | 736 |
| BshFI | GGCC | 3 cut(s) | 608, 715, 731 |
| BsiHKCI | CYCGRG | 1 cut(s) | 561 |
| BsiSI | CCGG | 1 cut(s) | 768 |
| BslFI | GGGAC | 1 cut(s) | 410 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 317, 376 |
| BsmAI | GTCTC | 1 cut(s) | 269 |
| BsmFI | GGGAC | 1 cut(s) | 410 |
| BsmI | GAATGC | 1 cut(s) | 40 |
| BsnI | GGCC | 3 cut(s) | 608, 715, 731 |
| Bso31I | GGTCTC | 1 cut(s) | 269 |
| BsoBI | CYCGRG | 1 cut(s) | 561 |
| Bsp143I | GATC | 1 cut(s) | 202 |
| BspACI | CCGC | 2 cut(s) | 605, 746 |
| BspANI | GGCC | 3 cut(s) | 608, 715, 731 |
| BspCNI | CTCAG | 3 cut(s) | 183, 473, 564 |
| BspHI | TCATGA | 1 cut(s) | 199 |
| BspLI | GGNNCC | 1 cut(s) | 699 |
| BspTNI | GGTCTC | 1 cut(s) | 269 |
| BsrFI | RCCGGY | 1 cut(s) | 767 |
| BsrI | ACTGG | 2 cut(s) | 352, 760 |
| BssAI | RCCGGY | 1 cut(s) | 767 |
| BssECI | CCNNGG | 3 cut(s) | 214, 279, 296 |
| BssMI | GATC | 1 cut(s) | 202 |
| BssT1I | CCWWGG | 3 cut(s) | 214, 279, 296 |
| Bst4CI | ACNGT | 2 cut(s) | 356, 652 |
| BstC8I | GCNNGC | 2 cut(s) | 520, 578 |
| BstDEI | CTNAG | 3 cut(s) | 170, 460, 572 |
| BstF5I | GGATG | 1 cut(s) | 436 |
| BstKTI | GATC | 1 cut(s) | 205 |
| BstMAI | GTCTC | 1 cut(s) | 269 |
| BstMBI | GATC | 1 cut(s) | 202 |
| BstNSI | RCATGY | 1 cut(s) | 580 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 506 |
| BstSFI | CTRYAG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 1 cut(s) | 736 |
| BstV2I | GAAGAC | 1 cut(s) | 149 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 347 |
| BsuRI | GGCC | 3 cut(s) | 608, 715, 731 |
| BtsCI | GGATG | 1 cut(s) | 436 |
| BtsI | GCAGTG | 1 cut(s) | 625 |
| BtsIMutI | CAGTG | 2 cut(s) | 345, 625 |
| Cac8I | GCNNGC | 2 cut(s) | 520, 578 |
| CciI | TCATGA | 1 cut(s) | 199 |
| Cfr10I | RCCGGY | 1 cut(s) | 767 |
| Cfr13I | GGNCC | 1 cut(s) | 337 |
| CviAII | CATG | 3 cut(s) | 200, 577, 614 |
| CviJI | RGCY | 9 cut(s) | 50, 301, 522, 608, 700, 715, 731, 749, 774 |
| CviKI_1 | RGCY | 9 cut(s) | 50, 301, 522, 608, 700, 715, 731, 749, 774 |
| DdeI | CTNAG | 3 cut(s) | 170, 460, 572 |
| DpnI | GATC | 1 cut(s) | 204 |
| DpnII | GATC | 1 cut(s) | 202 |
| DraI | TTTAAA | 1 cut(s) | 406 |
| EaeI | YGGCCR | 1 cut(s) | 713 |
| Eco130I | CCWWGG | 3 cut(s) | 214, 279, 296 |
| Eco147I | AGGCCT | 1 cut(s) | 731 |
| Eco31I | GGTCTC | 1 cut(s) | 269 |
| Eco47I | GGWCC | 1 cut(s) | 337 |
| Eco88I | CYCGRG | 1 cut(s) | 561 |
| EcoT14I | CCWWGG | 3 cut(s) | 214, 279, 296 |
| ErhI | CCWWGG | 3 cut(s) | 214, 279, 296 |
| FaeI | CATG | 3 cut(s) | 203, 580, 617 |
| FaqI | GGGAC | 1 cut(s) | 410 |
| FatI | CATG | 3 cut(s) | 199, 576, 613 |
| FbaI | TGATCA | 1 cut(s) | 202 |
| FblI | GTMKAC | 1 cut(s) | 647 |
| Fnu4HI | GCNGC | 4 cut(s) | 606, 747, 750, 772 |
| FokI | GGATG | 1 cut(s) | 443 |
| Fsp4HI | GCNGC | 4 cut(s) | 606, 747, 750, 772 |
| FspBI | CTAG | 3 cut(s) | 297, 677, 775 |
| GluI | GCNGC | 4 cut(s) | 606, 747, 750, 772 |
| HaeIII | GGCC | 3 cut(s) | 608, 715, 731 |
| HapII | CCGG | 1 cut(s) | 768 |
| Hin1II | CATG | 3 cut(s) | 203, 580, 617 |
| HincII | GTYRAC | 1 cut(s) | 538 |
| HindII | GTYRAC | 1 cut(s) | 538 |
| HindIII | AAGCTT | 2 cut(s) | 48, 520 |
| HinfI | GANTC | 3 cut(s) | 122, 266, 292 |
| HpaII | CCGG | 1 cut(s) | 768 |
| Hpy166II | GTNNAC | 3 cut(s) | 446, 538, 648 |
| Hpy188I | TCNGA | 5 cut(s) | 173, 271, 438, 454, 573 |
| Hpy188III | TCNNGA | 4 cut(s) | 119, 200, 561, 563 |
| Hpy8I | GTNNAC | 3 cut(s) | 446, 538, 648 |
| HpyAV | CCTTC | 3 cut(s) | 264, 380, 421 |
| HpyCH4III | ACNGT | 2 cut(s) | 356, 652 |
| HpyCH4V | TGCA | 5 cut(s) | 83, 156, 243, 595, 656 |
| HpyF3I | CTNAG | 3 cut(s) | 170, 460, 572 |
| Hsp92II | CATG | 3 cut(s) | 203, 580, 617 |
| Ksp22I | TGATCA | 1 cut(s) | 202 |
| Kzo9I | GATC | 1 cut(s) | 202 |
| LmnI | GCTCC | 1 cut(s) | 697 |
| LpnPI | CCDG | 7 cut(s) | 132, 261, 303, 333, 496, 729, 741 |
| Lsp1109I | GCAGC | 1 cut(s) | 736 |
| LweI | GCATC | 4 cut(s) | 376, 445, 582, 733 |
| MaeI | CTAG | 3 cut(s) | 297, 677, 775 |
| MaeIII | GTNAC | 2 cut(s) | 356, 365 |
| MalI | GATC | 1 cut(s) | 204 |
| MboI | GATC | 1 cut(s) | 202 |
| MboII | GAAGA | 5 cut(s) | 70, 154, 296, 341, 557 |
| MlsI | TGGCCA | 1 cut(s) | 715 |
| MluCI | AATT | 3 cut(s) | 176, 401, 486 |
| MluNI | TGGCCA | 1 cut(s) | 715 |
| MlyI | GAGTC | 1 cut(s) | 301 |
| MmeI | TCCRAC | 1 cut(s) | 364 |
| MnlI | CCTC | 7 cut(s) | 265, 328, 432, 469, 675, 678, 721 |
| Mox20I | TGGCCA | 1 cut(s) | 715 |
| MscI | TGGCCA | 1 cut(s) | 715 |
| MseI | TTAA | 5 cut(s) | 21, 54, 405, 414, 468 |
| MslI | CAYNNNNRTG | 2 cut(s) | 198, 618 |
| Msp20I | TGGCCA | 1 cut(s) | 715 |
| MspI | CCGG | 1 cut(s) | 768 |
| Mva1269I | GAATGC | 1 cut(s) | 40 |
| NdeII | GATC | 1 cut(s) | 202 |
| NlaIII | CATG | 3 cut(s) | 203, 580, 617 |
| NlaIV | GGNNCC | 1 cut(s) | 699 |
| NmuCI | GTSAC | 1 cut(s) | 365 |
| NspI | RCATGY | 1 cut(s) | 580 |
| PaeI | GCATGC | 1 cut(s) | 580 |
| PaeR7I | CTCGAG | 1 cut(s) | 561 |
| PagI | TCATGA | 1 cut(s) | 199 |
| PceI | AGGCCT | 1 cut(s) | 731 |
| PctI | GAATGC | 1 cut(s) | 40 |
| PfeI | GAWTC | 2 cut(s) | 122, 266 |
| PkrI | GCNGC | 4 cut(s) | 607, 748, 751, 773 |
| PleI | GAGTC | 1 cut(s) | 300 |
| PpsI | GAGTC | 1 cut(s) | 300 |
| PshAI | GACNNNNGTC | 1 cut(s) | 506 |
| PspN4I | GGNNCC | 1 cut(s) | 699 |
| PspPI | GGNCC | 1 cut(s) | 337 |
| RseI | CAYNNNNRTG | 2 cut(s) | 198, 618 |
| SaqAI | TTAA | 5 cut(s) | 21, 54, 405, 414, 468 |
| SatI | GCNGC | 4 cut(s) | 606, 747, 750, 772 |
| Sau3AI | GATC | 1 cut(s) | 202 |
| Sau96I | GGNCC | 1 cut(s) | 337 |
| SchI | GAGTC | 1 cut(s) | 301 |
| SetI | ASST | 9 cut(s) | 52, 110, 153, 220, 285, 339, 372, 524, 776 |
| SfaNI | GCATC | 4 cut(s) | 376, 445, 582, 733 |
| SfcI | CTRYAG | 1 cut(s) | 132 |
| Sfr274I | CTCGAG | 1 cut(s) | 561 |
| SinI | GGWCC | 1 cut(s) | 337 |
| SlaI | CTCGAG | 1 cut(s) | 561 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 198, 618 |
| SmlI | CTYRAG | 1 cut(s) | 561 |
| SmoI | CTYRAG | 1 cut(s) | 561 |
| SphI | GCATGC | 1 cut(s) | 580 |
| Sse9I | AATT | 3 cut(s) | 176, 401, 486 |
| SseBI | AGGCCT | 1 cut(s) | 731 |
| SsiI | CCGC | 2 cut(s) | 605, 746 |
| SspI | AATATT | 1 cut(s) | 209 |
| SspMI | CTAG | 3 cut(s) | 297, 677, 775 |
| StuI | AGGCCT | 1 cut(s) | 731 |
| StyI | CCWWGG | 3 cut(s) | 214, 279, 296 |
| TaaI | ACNGT | 2 cut(s) | 356, 652 |
| TaqI | TCGA | 1 cut(s) | 562 |
| TasI | AATT | 3 cut(s) | 176, 401, 486 |
| TauI | GCSGC | 2 cut(s) | 608, 749 |
| TfiI | GAWTC | 2 cut(s) | 122, 266 |
| Tru1I | TTAA | 5 cut(s) | 21, 54, 405, 414, 468 |
| Tru9I | TTAA | 5 cut(s) | 21, 54, 405, 414, 468 |
| TscAI | CASTG | 2 cut(s) | 352, 625 |
| TseFI | GTSAC | 1 cut(s) | 365 |
| TseI | GCWGC | 2 cut(s) | 749, 771 |
| Tsp45I | GTSAC | 1 cut(s) | 365 |
| TspDTI | ATGAA | 3 cut(s) | 39, 155, 188 |
| TspRI | CASTG | 2 cut(s) | 352, 625 |
| VpaK11BI | GGWCC | 1 cut(s) | 337 |
| XapI | RAATTY | 1 cut(s) | 401 |
| XceI | RCATGY | 1 cut(s) | 580 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 319 |
| XhoI | CTCGAG | 1 cut(s) | 561 |
| XmaJI | CCTAGG | 1 cut(s) | 296 |
| XmiI | GTMKAC | 1 cut(s) | 647 |
| XspI | CTAG | 3 cut(s) | 297, 677, 775 |