Rmu_sc0036469.1_g000001

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0036469.1
OG0000223
Physical Location & Seq
Reverse (-)
198 .. 2974
2777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0036469.1_g000001.1.cds

Sequence Viewer

Length: 1857 bp
atggaaggttcacacaagaaaaagggtaaaagacccaaccttttggccgatactgtgttttcttggtcccttgatgacattttcaacgaacgtctcttcaagaacaaggtggaaaagattcctgaatcatttcactctgctgagcattacttcgggtgttatatgtatcctttattggaagaaacacgagcgcaagtccattcgagtatggaaacgatttacagagcaccatttgctaaagtagttgcttttgaaaaagccaagccatatgggacaaagctatataatatcaaggttgattactggcgaaacaggttcaatgagcgtggcaaggagccatacaaaactttgcctggtgatctttttgttttagcaaatgctaaacctgaaactgtttcagatttacaaagggtagggaggtcatgggcttttgcatcggtcactaaagtctcggaaaatgagaacaaggatgacactacttctctttattttaaagtcaaggcttccaaagagcttgaagtcgtaaagagcacaacaccactgtttatggtttttctagtgaacttgatcccaaatggaagaatatggaaagctttgcacatgtccaaaaacctgaagattatcaaggaggttctgtgcactgattctgtggctcagaaaaatctctgctctgaaaagaacaatgacattgtgaataagagattagttcagagtttatcatctggtttgaatgaatcccagactgggaccgttctggcctgtcttgaaatgctgcattctcatgaaaagtctgccgtggaactaatttggggtcctcctggtactggaaaaactaaaactattgtgactctacttttaaccctgctacagatgaattgtaggactcttgtctgtgccccaacaaatgttgcaataactgaagttgcttctcgcgttgtgaagatggtgactgaagtagagtccagtgctttgttttgttctttgggagaagttcttctatttgggaataaggagcgactcaaagttggctcagacattgaagagatatatttagattaccgtctcaaaaggcttgttgagtgcttaggaccacggactggttggaggcattgctttgcttccatgatagattgtcttgaagatggtgtttctcactaccatacttttttggaaaatgagtttactattgagaaggaaccaaaggctataggtcaaatgaaagcgaaagaaagcagaattgtcgctaaagctggcaaggacacatgcaaaacttttctggaatttattagagacagatttgttactactgcatcaactctaagatgttgcctttctatcttctgtacccacataccgaaaaattacatttctgtggataatttccaaaacatggttttgcttgtcaaattggttgactcctttgaatcattgttgtttcaagttaatgttgcttctgaagcacttgaagacattttctcacgttctgaagttgaagacatatcagagacatgtgctgataactcgtttcttctattcacatatagaagagaatgccttaaagtcttacacaatctatttgactctctgagtgaacttcaccttccggattttatgaatcaagagtctctaatggcattttgttttcaaagtgcttccttgatattttgcactgcatccagctcatataagttgcataaattggcaatggagcctctaagcattgtggttattgacgaagctgcgcaattgaaagagtgtgaatcaacaatcccccttcaactaccaggcgtgaagcatgccgtgcttgttggtgatgaatgtcagttaccagctatagtgaacagcattgttagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006353 GO:0006355 GO:0006357 GO:0006364 GO:0006366 GO:0006369 GO:0006378 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008033 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016180 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019904 GO:0022613 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032574 GO:0032575 GO:0032774 GO:0032991 GO:0033554 GO:0033677 GO:0033678 GO:0033680 GO:0033682 GO:0034470 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035649 GO:0042254 GO:0042592 GO:0042623 GO:0043139 GO:0043141 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043618 GO:0043620 GO:0043628 GO:0043631 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045005 GO:0045454 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:1990248 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

618

Amino Acids

69.87

Weight (kDa)

6.75

Isoelectric Point (pI)

37.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000223)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26390 FvH4_1g26391 FvH4_2g00700 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36210 FvH4_4g36221 FvH4_4g36250 FvH4_4g36250 FvH4_4g36250 FvH4_4g36280 FvH4_4g36280 FvH4_5g34990
malus_domestica MD09G1274800.v1.1 MD09G1274900.v1.1 MD09G1275500.v1.1 MD13G1010700.v1.1 MD16G1270700.v1.1
prunus_persica Prupe.1G087400_v2.0.a1 Prupe.1G134300_v2.0.a1 Prupe.1G215600_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G342300_v2.0.a1 Prupe.8G106200_v2.0.a1 Prupe.8G106200_v2.0.a1
pyrus_communis pycom09g18530 pycom09g18550 pycom09g18590 pycom13g00880 pycom16g24010
rosa_chinensis RchiOBHm_Chr2g0116911 RchiOBHm_Chr2g0116921 RchiOBHm_Chr3g0486161 RchiOBHm_Chr3g0486171 RchiOBHm_Chr4g0445931 RchiOBHm_Chr4g0445961 RchiOBHm_Chr4g0445971 RchiOBHm_Chr4g0445991 RchiOBHm_Chr4g0446001 RchiOBHm_Chr4g0446011 RchiOBHm_Chr4g0446031
rosa_laevigata RLG00000002343 RLG00000005696 RLG00000005698 RLG00000005699 RLG00000005701 RLG00000005703 RLG00000018313 RLG00000023096 RLG00000023099
rosa_multiflora Rmu_co8408865.1_g000001 Rmu_co8420123.1_g000001 Rmu_sc0000372.1_g000002 Rmu_sc0003001.1_g000002 Rmu_sc0003001.1_g000003 Rmu_sc0003001.1_g000006 Rmu_sc0003001.1_g000007 Rmu_sc0006315.1_g000012 Rmu_sc0007511.1_g000001 Rmu_sc0008543.1_g000001 Rmu_sc0009534.1_g000001 Rmu_sc0024967.1_g000001 Rmu_sc0036469.1_g000001 Rmu_ssc0000238.1_g000032
rosa_roxburghii Rroxscaffold_2G00126890 Rroxscaffold_5G00386350 Rroxscaffold_5G00386360 Rroxscaffold_5G00386370 Rroxscaffold_5G00386380 Rroxscaffold_5G00386400 Rroxscaffold_5G00386410 Rroxscaffold_5G00386430 Rroxscaffold_5G00386440 Rroxscaffold_6G00396020
rosa_rugosa Rorug03G0223800 Rorug03G0223800 Rorug03G0223800 Rorug04G0366100 Rorug04G0366200 Rorug04G0366300 Rorug04G0366400 Rorug04G0366500 Rorug04G0366600 Rorug04G0366600 Rorug04G0366700 Rorug04G0366700
rosa_samantha Rh1AG167300 Rh2AG265000 Rh2BG276500 Rh2DG272400 Rh2DG291200 Rh2DG291300 Rh2DG291400 Rh3AG273600 Rh3AG273700 Rh3BG308800 Rh3BG309000 Rh3CG307200 Rh3DG303500 Rh4AG427400 Rh4AG427700 Rh4AG427800 Rh4AG427900 Rh4AG428000 Rh4AG428300 Rh4AG428400 Rh4AG428500 Rh4AG428600 Rh4AG428700 Rh4BG426000 Rh4BG437600 Rh4BG437800 Rh4BG437900 Rh4BG438100 Rh4CG454300 Rh4CG454500 Rh4CG454600 Rh4CG454700 Rh4CG454800 Rh4CG454900 Rh4CG455200 Rh4CG455500 Rh4DG435700 Rh4DG435800 Rh4DG435900 Rh4DG436000 Rh4DG436100 Rh4DG436300 Rh4DG436600
rosa_wichuraiana Rw2G020880 Rw3G024250 Rw4G036590 Rw4G036600 Rw4G036620 Rw4G036630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1743
AccB7I CCANNNNNTGG 2 cut(s) 1097, 1390
AccII CGCG 1 cut(s) 933
AccIII TCCGGA 1 cut(s) 1603
AclWI GGATC 1 cut(s) 562
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 1 cut(s) 1280
AcuI CTGAAG 5 cut(s) 635, 939, 972, 1476, 1506
AfaI GTAC 2 cut(s) 823, 1345
AfiI CCNNNNNNNGG 4 cut(s) 744, 824, 1097, 1390
AflIII ACRYGT 2 cut(s) 600, 1508
AjnI CCWGG 3 cut(s) 352, 817, 1783
AluBI AGCT 7 cut(s) 280, 514, 593, 1250, 1680, 1739, 1832
AluI AGCT 7 cut(s) 280, 514, 593, 1250, 1680, 1739, 1832
Alw21I GWGCWC 3 cut(s) 229, 533, 641
Alw26I GTCTC 6 cut(s) 98, 454, 1067, 1284, 1499, 1629
Alw44I GTGCAC 1 cut(s) 637
AlwI GGATC 1 cut(s) 562
Aor13HI TCCGGA 1 cut(s) 1603
AoxI GGCC 2 cut(s) 45, 756
ApaLI GTGCAC 1 cut(s) 637
ApeKI GCWGC 2 cut(s) 772, 1739
ApoI RAATTY 1 cut(s) 1280
Asp700I GAANNNNTTC 3 cut(s) 117, 129, 993
AspLEI GCGC 2 cut(s) 193, 1744
AspS9I GGNCC 4 cut(s) 66, 747, 812, 1088
AsuHPI GGTGA 4 cut(s) 368, 958, 1589, 1823
AvaII GGWCC 4 cut(s) 66, 747, 812, 1088
BaeGI GKGCMC 2 cut(s) 641, 898
BauI CACGAG 1 cut(s) 186
BbsI GAAGAC 2 cut(s) 1473, 1500
Bbv12I GWGCWC 3 cut(s) 229, 533, 641
BbvI GCAGC 2 cut(s) 759, 1726
BccI CCATC 2 cut(s) 937, 1136
BceAI ACGGC 2 cut(s) 779, 1784
BcgI CGANNNNNNTGC 2 cut(s) 1222, 1256
BciT130I CCWGG 3 cut(s) 354, 819, 1785
BciVI GTATCC 1 cut(s) 177
BcoDI GTCTC 6 cut(s) 98, 454, 1067, 1284, 1499, 1629
BfaI CTAG 1 cut(s) 557
BfmI CTRYAG 3 cut(s) 866, 1206, 1833
BfuI GTATCC 1 cut(s) 177
BisI GCNGC 2 cut(s) 773, 1740
BlpI GCTNAGC 1 cut(s) 141
BlsI GCNGC 2 cut(s) 774, 1741
Bme1390I CCNGG 3 cut(s) 354, 819, 1785
Bme18I GGWCC 4 cut(s) 66, 747, 812, 1088
BmgT120I GGNCC 4 cut(s) 66, 747, 812, 1088
BmiI GGNNCC 6 cut(s) 68, 336, 748, 813, 1197, 1710
BmrFI CCNGG 3 cut(s) 354, 819, 1785
BmrI ACTGGG 1 cut(s) 753
BmsI GCATC 3 cut(s) 443, 1319, 1682
BmuI ACTGGG 1 cut(s) 753
BoxI GACNNNNGTC 1 cut(s) 887
BpiI GAAGAC 2 cut(s) 1473, 1500
Bpu10I CCTNAGC 1 cut(s) 1084
Bpu1102I GCTNAGC 1 cut(s) 141
BsaJI CCNNGG 2 cut(s) 795, 1091
BsaWI WCCGGW 1 cut(s) 1603
BsaXI ACNNNNNCTCC 2 cut(s) 620, 650
Bsc4I CCNNNNNNNGG 4 cut(s) 744, 824, 1097, 1390
Bse1I ACTGG 5 cut(s) 308, 748, 829, 963, 1102
Bse3DI GCAATG 2 cut(s) 1108, 1710
BseAI TCCGGA 1 cut(s) 1603
BseBI CCWGG 3 cut(s) 354, 819, 1785
BseDI CCNNGG 2 cut(s) 795, 1091
BseGI GGATG 2 cut(s) 475, 1673
BseLI CCNNNNNNNGG 4 cut(s) 744, 824, 1097, 1390
BseMI GCAATG 2 cut(s) 1108, 1710
BseMII CTCAG 4 cut(s) 132, 668, 1044, 1577
BseNI ACTGG 5 cut(s) 308, 748, 829, 963, 1102
BseSI GKGCMC 2 cut(s) 641, 898
BseXI GCAGC 2 cut(s) 759, 1726
Bsh1236I CGCG 1 cut(s) 933
BshFI GGCC 2 cut(s) 47, 758
BsiHKAI GWGCWC 3 cut(s) 229, 533, 641
BsiSI CCGG 1 cut(s) 1604
BslFI GGGAC 3 cut(s) 52, 286, 760
BslI CCNNNNNNNGG 4 cut(s) 744, 824, 1097, 1390
BsmAI GTCTC 6 cut(s) 98, 454, 1067, 1284, 1499, 1629
BsmBI CGTCTC 2 cut(s) 98, 1067
BsmFI GGGAC 3 cut(s) 52, 286, 760
BsmI GAATGC 2 cut(s) 775, 1556
BsnI GGCC 2 cut(s) 47, 758
Bsp1286I GDGCHC 4 cut(s) 229, 533, 641, 898
Bsp13I TCCGGA 1 cut(s) 1603
Bsp143I GATC 2 cut(s) 358, 567
Bsp1720I GCTNAGC 1 cut(s) 141
BspANI GGCC 2 cut(s) 47, 758
BspCNI CTCAG 4 cut(s) 133, 667, 1043, 1578
BspEI TCCGGA 1 cut(s) 1603
BspFNI CGCG 1 cut(s) 933
BspHI TCATGA 1 cut(s) 781
BspLI GGNNCC 6 cut(s) 68, 336, 748, 813, 1197, 1710
BspPI GGATC 1 cut(s) 562
BsrDI GCAATG 2 cut(s) 1108, 1710
BsrI ACTGG 5 cut(s) 308, 748, 829, 963, 1102
BssECI CCNNGG 2 cut(s) 795, 1091
BssMI GATC 2 cut(s) 358, 567
BssSI CACGAG 1 cut(s) 186
Bst2BI CACGAG 1 cut(s) 186
Bst2UI CCWGG 3 cut(s) 354, 819, 1785
Bst4CI ACNGT 5 cut(s) 55, 394, 543, 751, 1061
Bst6I CTCTTC 3 cut(s) 101, 1035, 1540
BstAPI GCANNNNNTGC 2 cut(s) 233, 1801
BstC8I GCNNGC 2 cut(s) 1252, 1797
BstDEI CTNAG 7 cut(s) 141, 654, 1030, 1084, 1319, 1586, 1715
BstDSI CCRYGG 2 cut(s) 795, 1091
BstF5I GGATG 2 cut(s) 475, 1673
BstFNI CGCG 1 cut(s) 933
BstHHI GCGC 2 cut(s) 193, 1744
BstKTI GATC 2 cut(s) 361, 570
BstMAI GTCTC 6 cut(s) 98, 454, 1067, 1284, 1499, 1629
BstMBI GATC 2 cut(s) 358, 567
BstMWI GCNNNNNNNGC 3 cut(s) 233, 1457, 1801
BstNI CCWGG 3 cut(s) 354, 819, 1785
BstNSI RCATGY 4 cut(s) 604, 1266, 1512, 1799
BstPAI GACNNNNGTC 1 cut(s) 887
BstSCI CCNGG 3 cut(s) 352, 817, 1783
BstSFI CTRYAG 3 cut(s) 866, 1206, 1833
BstSLI GKGCMC 2 cut(s) 641, 898
BstUI CGCG 1 cut(s) 933
BstV1I GCAGC 2 cut(s) 759, 1726
BstV2I GAAGAC 2 cut(s) 1473, 1500
BstXI CCANNNNNNTGG 1 cut(s) 43
BsuI GTATCC 1 cut(s) 177
BsuRI GGCC 2 cut(s) 47, 758
BtgI CCRYGG 2 cut(s) 795, 1091
BtsCI GGATG 2 cut(s) 475, 1673
BtsI GCAGTG 1 cut(s) 1668
BtsIMutI CAGTG 4 cut(s) 539, 639, 970, 1668
Cac8I GCNNGC 2 cut(s) 1252, 1797
CciI TCATGA 1 cut(s) 781
CfoI GCGC 2 cut(s) 193, 1744
Cfr13I GGNCC 4 cut(s) 66, 747, 812, 1088
Csp6I GTAC 2 cut(s) 822, 1344
CspCI CAANNNNNGTGG 2 cut(s) 307, 342
CviAII CATG 8 cut(s) 423, 601, 782, 1123, 1263, 1390, 1509, 1796
CviQI GTAC 2 cut(s) 822, 1344
DdeI CTNAG 7 cut(s) 141, 654, 1030, 1084, 1319, 1586, 1715
DpnI GATC 2 cut(s) 360, 569
DpnII GATC 2 cut(s) 358, 567
DraI TTTAAA 1 cut(s) 493
EaeI YGGCCR 1 cut(s) 45
Eam1104I CTCTTC 3 cut(s) 101, 1035, 1540
EarI CTCTTC 3 cut(s) 101, 1035, 1540
Eco47I GGWCC 4 cut(s) 66, 747, 812, 1088
Eco57I CTGAAG 5 cut(s) 635, 939, 972, 1476, 1506
EcoO109I RGGNCCY 1 cut(s) 812
EcoRII CCWGG 3 cut(s) 352, 817, 1783
Esp3I CGTCTC 2 cut(s) 98, 1067
FaeI CATG 8 cut(s) 426, 604, 785, 1126, 1266, 1393, 1512, 1799
FaqI GGGAC 3 cut(s) 52, 286, 760
FatI CATG 8 cut(s) 422, 600, 781, 1122, 1262, 1389, 1508, 1795
FauNDI CATATG 1 cut(s) 268
Fnu4HI GCNGC 2 cut(s) 773, 1740
FokI GGATG 2 cut(s) 482, 1660
Fsp4HI GCNGC 2 cut(s) 773, 1740
FspBI CTAG 1 cut(s) 557
FspI TGCGCA 1 cut(s) 1743
GlaI GCGC 2 cut(s) 192, 1743
GluI GCNGC 2 cut(s) 773, 1740
HaeIII GGCC 2 cut(s) 47, 758
HapII CCGG 1 cut(s) 1604
HhaI GCGC 2 cut(s) 193, 1744
Hin1II CATG 8 cut(s) 426, 604, 785, 1126, 1266, 1393, 1512, 1799
Hin6I GCGC 2 cut(s) 191, 1742
HinP1I GCGC 2 cut(s) 191, 1742
HincII GTYRAC 1 cut(s) 1414
HindII GTYRAC 1 cut(s) 1414
HindIII AAGCTT 1 cut(s) 591
HpaII CCGG 1 cut(s) 1604
HphI GGTGA 4 cut(s) 368, 958, 1589, 1823
Hpy166II GTNNAC 7 cut(s) 11, 562, 639, 1182, 1414, 1592, 1840
Hpy188III TCNNGA 8 cut(s) 100, 122, 764, 782, 1136, 1277, 1604, 1619
Hpy8I GTNNAC 7 cut(s) 11, 562, 639, 1182, 1414, 1592, 1840
HpyAV CCTTC 3 cut(s) 1186, 1610, 1784
HpyCH4III ACNGT 5 cut(s) 55, 394, 543, 751, 1061
HpyCH4IV ACGT 2 cut(s) 91, 1480
HpyF10VI GCNNNNNNNGC 3 cut(s) 233, 1457, 1801
HpyF3I CTNAG 7 cut(s) 141, 654, 1030, 1084, 1319, 1586, 1715
HpySE526I ACGT 2 cut(s) 91, 1480
Hsp92II CATG 8 cut(s) 426, 604, 785, 1126, 1266, 1393, 1512, 1799
HspAI GCGC 2 cut(s) 191, 1742
Kpn2I TCCGGA 1 cut(s) 1603
Kzo9I GATC 2 cut(s) 358, 567
LmnI GCTCC 3 cut(s) 334, 1012, 1708
Lsp1109I GCAGC 2 cut(s) 759, 1726
LweI GCATC 3 cut(s) 443, 1319, 1682
MaeI CTAG 1 cut(s) 557
MaeII ACGT 2 cut(s) 91, 1480
MaeIII GTNAC 5 cut(s) 439, 844, 946, 1300, 1824
MalI GATC 2 cut(s) 360, 569
MboI GATC 2 cut(s) 358, 567
MfeI CAATTG 1 cut(s) 1745
MhlI GDGCHC 4 cut(s) 229, 533, 641, 898
MluCI AATT 9 cut(s) 804, 874, 1236, 1280, 1360, 1378, 1406, 1697, 1745
MlyI GAGTC 7 cut(s) 841, 877, 968, 1011, 1409, 1574, 1631
MmeI TCCRAC 1 cut(s) 1082
MnlI CCTC 5 cut(s) 411, 622, 825, 1098, 1722
MroI TCCGGA 1 cut(s) 1603
MroXI GAANNNNTTC 3 cut(s) 117, 129, 993
MseI TTAA 4 cut(s) 492, 857, 1443, 1557
MslI CAYNNNNRTG 2 cut(s) 780, 1370
MspI CCGG 1 cut(s) 1604
MspR9I CCNGG 3 cut(s) 354, 819, 1785
MunI CAATTG 1 cut(s) 1745
Mva1269I GAATGC 2 cut(s) 775, 1556
MvaI CCWGG 3 cut(s) 354, 819, 1785
MvnI CGCG 1 cut(s) 933
MwoI GCNNNNNNNGC 3 cut(s) 233, 1457, 1801
NdeI CATATG 1 cut(s) 268
NdeII GATC 2 cut(s) 358, 567
NlaIII CATG 8 cut(s) 426, 604, 785, 1126, 1266, 1393, 1512, 1799
NlaIV GGNNCC 6 cut(s) 68, 336, 748, 813, 1197, 1710
NmuCI GTSAC 3 cut(s) 439, 844, 946
NsbI TGCGCA 1 cut(s) 1743
NspI RCATGY 4 cut(s) 604, 1266, 1512, 1799
PaeI GCATGC 1 cut(s) 1799
PagI TCATGA 1 cut(s) 781
PciI ACATGT 2 cut(s) 600, 1508
PctI GAATGC 2 cut(s) 775, 1556
PdmI GAANNNNTTC 3 cut(s) 117, 129, 993
PfeI GAWTC 7 cut(s) 118, 125, 644, 734, 1424, 1615, 1760
PflMI CCANNNNNTGG 2 cut(s) 1097, 1390
PkrI GCNGC 2 cut(s) 774, 1741
PleI GAGTC 7 cut(s) 841, 877, 967, 1011, 1409, 1574, 1630
PpsI GAGTC 7 cut(s) 841, 877, 967, 1011, 1409, 1574, 1630
PpuMI RGGWCCY 1 cut(s) 812
PscI ACATGT 2 cut(s) 600, 1508
PshAI GACNNNNGTC 1 cut(s) 887
Psp5II RGGWCCY 1 cut(s) 812
Psp6I CCWGG 3 cut(s) 352, 817, 1783
PspGI CCWGG 3 cut(s) 352, 817, 1783
PspN4I GGNNCC 6 cut(s) 68, 336, 748, 813, 1197, 1710
PspPI GGNCC 4 cut(s) 66, 747, 812, 1088
PspPPI RGGWCCY 1 cut(s) 812
RsaI GTAC 2 cut(s) 823, 1345
RsaNI GTAC 2 cut(s) 822, 1344
RseI CAYNNNNRTG 2 cut(s) 780, 1370
SaqAI TTAA 4 cut(s) 492, 857, 1443, 1557
SatI GCNGC 2 cut(s) 773, 1740
Sau3AI GATC 2 cut(s) 358, 567
Sau96I GGNCC 4 cut(s) 66, 747, 812, 1088
SchI GAGTC 7 cut(s) 841, 877, 968, 1011, 1409, 1574, 1631
ScrFI CCNGG 3 cut(s) 354, 819, 1785
SduI GDGCHC 4 cut(s) 229, 533, 641, 898
SfaNI GCATC 3 cut(s) 443, 1319, 1682
SfcI CTRYAG 3 cut(s) 866, 1206, 1833
SinI GGWCC 4 cut(s) 66, 747, 812, 1088
SmiMI CAYNNNNRTG 2 cut(s) 780, 1370
SphI GCATGC 1 cut(s) 1799
Sse9I AATT 9 cut(s) 804, 874, 1236, 1280, 1360, 1378, 1406, 1697, 1745
SspMI CTAG 1 cut(s) 557
StyD4I CCNGG 3 cut(s) 352, 817, 1783
TaaI ACNGT 5 cut(s) 55, 394, 543, 751, 1061
TaiI ACGT 2 cut(s) 94, 1483
TaqI TCGA 1 cut(s) 203
TaqII GACCGA 1 cut(s) 427
TasI AATT 9 cut(s) 804, 874, 1236, 1280, 1360, 1378, 1406, 1697, 1745
TfiI GAWTC 7 cut(s) 118, 125, 644, 734, 1424, 1615, 1760
Tru1I TTAA 4 cut(s) 492, 857, 1443, 1557
Tru9I TTAA 4 cut(s) 492, 857, 1443, 1557
TscAI CASTG 4 cut(s) 546, 646, 970, 1675
TseFI GTSAC 3 cut(s) 439, 844, 946
TseI GCWGC 2 cut(s) 772, 1739
Tsp45I GTSAC 3 cut(s) 439, 844, 946
TspDTI ATGAA 6 cut(s) 747, 798, 887, 1232, 1628, 1830
TspGWI ACGGA 1 cut(s) 1108
TspRI CASTG 4 cut(s) 546, 646, 970, 1675
Van91I CCANNNNNTGG 2 cut(s) 1097, 1390
VneI GTGCAC 1 cut(s) 637
VpaK11BI GGWCC 4 cut(s) 66, 747, 812, 1088
XapI RAATTY 1 cut(s) 1280
XceI RCATGY 4 cut(s) 604, 1266, 1512, 1799
XcmI CCANNNNNNNNNTGG 1 cut(s) 1098
XmnI GAANNNNTTC 3 cut(s) 117, 129, 993
XspI CTAG 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.