FvH4_4g36221

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000223
Physical Location & Seq
Forward (+)
33252946 .. 33254904
1959 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g36221.t1

Sequence Viewer

Length: 1530 bp
ATGATTCTTCTTAGACAAAGTGATGCTTTTAAAAAACTTCTCAAACAACTCGTTGTTGATTATACCAGCTCAACTATTGAGCTTTCCTATGGGCAAGTTGGAAGGCTAGCAATGATTATTCTGGGGTCCGGTAGTGTTGATTCTGAACTACATGAGAAGCTCGTGAAAGATTTGAAATGTAGTCGCCCATGGGAGTTGTTCATTCTGAATATGTGTGGGAGTATCATTGGAGTAAAGAAGGGGTCTGTACATGTGATTAATACTCGAGAAACAAGGTGTAACCTTGTCAGGCAGTTGCATCAAGCTTTGGTTGAAACCTATCATACAAACTGGAGGACTGTTTTTGACTATATTTCGCCTAATGGTTTCTTGTATCTTACGGAACGCCTTTTGATGTTGGTATCTTGCTTCCAAGGTTATGTTGTCACTACCAAATCTTGTTTCATTGAATGGTTGATGCAGAATAGAGATACCAAATTTACTTCTAGTACACAGGCAGATGTGCTAATATCTTTCAAACCAATCCTAAAGTTTCTGCGCCATGTGGTTCGGGAGTTTCTCTATGATAAGAAAACCACAATTCAATGGATTCAAAGGTTTATCACAGAGTGGAAGGAGTATTACTCGCTGCTGGTTCTTAGATCGGTTCTCATCTTGTGTTTGCTTTATATCAATTTTGGGATGTGTTTTGATGTACTCTTAGATGTTCTACGGAGGGAACATATCACTGAACAACTACCAACGGAGGTTTGCGATGCACTTAGGAAATTTATTTTTGCACAAGATACTCTCAGTATGGATGTGAAGGTGAATGTGCTTGCTTCAGCTTTTAAGAAGGCTGGTAATGATTTGGTAGTTGCAAGTCTTGGGATTGATTGCTCAAGGTTCTTTAGTTCAGACTCCATTTTTGTTGACATGAAGGCTATTGTGTGGTGTGATGAAACATTTTCGAAATTGTTAGCCCATTTGCATATTCATGTTCCATGTTCATCCTCTCAATATGTAGCCGTTTTTGGAGAAGCTAATGCTAATGATTGTGCTGGGCCTTCTGCTTTTGATTCGGATGAGGCTGAGATCAAAAGTTCTAAGCTTCTTCAACCCAACTCAGGTCTGGAAGCAGATGAGGTGAAATACAGCGGGAACCTCCCTAAGAATTTTGATCACTTGTGGGATATATTGGAAGGCTTGTTGGAGTTGGAAAAATTTGTTTTCCTTTTAACTTCTGTGTGGTCTGCACGCTGTCCGAACGCATTTGAACAAATATTATCTGGAGAAGTGATGACAATGCTTGATGATTTAATGCAACTTTATGCGGCATTAGATGGGAGTGAACAAGAACTCCGCAACAAAATATCTACAGTTGCACAACTTAGCAGGAGGTTGCTCAGGAGGCGGGAGAGGATTTATTGGCCTGAAAAGATAGAACCTGAATTTTCGCAGCTGTTTTTGGAGAACAATGTCAAACTTGCTGGAAAGGAACTCGAGACCATTGTCTGGGTCCGGCAACCATTTTACAGCAGAAAAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006353 GO:0006355 GO:0006357 GO:0006364 GO:0006366 GO:0006369 GO:0006378 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008033 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016180 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019904 GO:0022613 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032574 GO:0032575 GO:0032774 GO:0032991 GO:0033554 GO:0033677 GO:0033678 GO:0033680 GO:0033682 GO:0034470 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035649 GO:0042254 GO:0042592 GO:0042623 GO:0043139 GO:0043141 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043618 GO:0043620 GO:0043628 GO:0043631 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045005 GO:0045454 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:1990248 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

510

Amino Acids

58.58

Weight (kDa)

6.4

Isoelectric Point (pI)

39.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000223)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26390 FvH4_1g26391 FvH4_2g00700 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36210 FvH4_4g36221 FvH4_4g36250 FvH4_4g36250 FvH4_4g36250 FvH4_4g36280 FvH4_4g36280 FvH4_5g34990
malus_domestica MD09G1274800.v1.1 MD09G1274900.v1.1 MD09G1275500.v1.1 MD13G1010700.v1.1 MD16G1270700.v1.1
prunus_persica Prupe.1G087400_v2.0.a1 Prupe.1G134300_v2.0.a1 Prupe.1G215600_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G342300_v2.0.a1 Prupe.8G106200_v2.0.a1 Prupe.8G106200_v2.0.a1
pyrus_communis pycom09g18530 pycom09g18550 pycom09g18590 pycom13g00880 pycom16g24010
rosa_chinensis RchiOBHm_Chr2g0116911 RchiOBHm_Chr2g0116921 RchiOBHm_Chr3g0486161 RchiOBHm_Chr3g0486171 RchiOBHm_Chr4g0445931 RchiOBHm_Chr4g0445961 RchiOBHm_Chr4g0445971 RchiOBHm_Chr4g0445991 RchiOBHm_Chr4g0446001 RchiOBHm_Chr4g0446011 RchiOBHm_Chr4g0446031
rosa_laevigata RLG00000002343 RLG00000005696 RLG00000005698 RLG00000005699 RLG00000005701 RLG00000005703 RLG00000018313 RLG00000023096 RLG00000023099
rosa_multiflora Rmu_co8408865.1_g000001 Rmu_co8420123.1_g000001 Rmu_sc0000372.1_g000002 Rmu_sc0003001.1_g000002 Rmu_sc0003001.1_g000003 Rmu_sc0003001.1_g000006 Rmu_sc0003001.1_g000007 Rmu_sc0006315.1_g000012 Rmu_sc0007511.1_g000001 Rmu_sc0008543.1_g000001 Rmu_sc0009534.1_g000001 Rmu_sc0024967.1_g000001 Rmu_sc0036469.1_g000001 Rmu_ssc0000238.1_g000032
rosa_roxburghii Rroxscaffold_2G00126890 Rroxscaffold_5G00386350 Rroxscaffold_5G00386360 Rroxscaffold_5G00386370 Rroxscaffold_5G00386380 Rroxscaffold_5G00386400 Rroxscaffold_5G00386410 Rroxscaffold_5G00386430 Rroxscaffold_5G00386440 Rroxscaffold_6G00396020
rosa_rugosa Rorug03G0223800 Rorug03G0223800 Rorug03G0223800 Rorug04G0366100 Rorug04G0366200 Rorug04G0366300 Rorug04G0366400 Rorug04G0366500 Rorug04G0366600 Rorug04G0366600 Rorug04G0366700 Rorug04G0366700
rosa_samantha Rh1AG167300 Rh2AG265000 Rh2BG276500 Rh2DG272400 Rh2DG291200 Rh2DG291300 Rh2DG291400 Rh3AG273600 Rh3AG273700 Rh3BG308800 Rh3BG309000 Rh3CG307200 Rh3DG303500 Rh4AG427400 Rh4AG427700 Rh4AG427800 Rh4AG427900 Rh4AG428000 Rh4AG428300 Rh4AG428400 Rh4AG428500 Rh4AG428600 Rh4AG428700 Rh4BG426000 Rh4BG437600 Rh4BG437800 Rh4BG437900 Rh4BG438100 Rh4CG454300 Rh4CG454500 Rh4CG454600 Rh4CG454700 Rh4CG454800 Rh4CG454900 Rh4CG455200 Rh4CG455500 Rh4DG435700 Rh4DG435800 Rh4DG435900 Rh4DG436000 Rh4DG436100 Rh4DG436300 Rh4DG436600
rosa_wichuraiana Rw2G020880 Rw3G024250 Rw4G036590 Rw4G036600 Rw4G036620 Rw4G036630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1494
AciI CCGC 4 cut(s) 1137, 1313, 1342, 1393
AcsI RAATTY 5 cut(s) 476, 767, 1153, 1202, 1430
AcuI CTGAAG 1 cut(s) 807
AdeI CACNNNGTG 1 cut(s) 609
AfaI GTAC 3 cut(s) 249, 490, 696
AfiI CCNNNNNNNGG 2 cut(s) 1106, 1494
AflIII ACRYGT 1 cut(s) 250
AgsI TTSAA 8 cut(s) 175, 314, 449, 517, 584, 593, 1097, 1256
AjuI GAANNNNNNNTTGG 2 cut(s) 425, 457
AloI GAACNNNNNNTCC 2 cut(s) 1323, 1355
AluBI AGCT 8 cut(s) 69, 82, 160, 305, 827, 1022, 1090, 1441
AluI AGCT 8 cut(s) 69, 82, 160, 305, 827, 1022, 1090, 1441
Alw26I GTCTC 1 cut(s) 1478
Ama87I CYCGRG 2 cut(s) 264, 1481
AoxI GGCC 2 cut(s) 1043, 1409
ApeKI GCWGC 2 cut(s) 628, 1438
ApoI RAATTY 5 cut(s) 476, 767, 1153, 1202, 1430
ArsI GACNNNNNNTTYG 2 cut(s) 890, 922
AseI ATTAAT 1 cut(s) 258
AspLEI GCGC 1 cut(s) 540
AspS9I GGNCC 3 cut(s) 126, 1043, 1498
AsuHPI GGTGA 2 cut(s) 820, 1138
AsuII TTCGAA 1 cut(s) 950
AsuNHI GCTAGC 1 cut(s) 106
AvaI CYCGRG 2 cut(s) 264, 1481
AvaII GGWCC 2 cut(s) 126, 1498
BarI GAAGNNNNNNTAC 2 cut(s) 605, 637
BauI CACGAG 1 cut(s) 161
BbvI GCAGC 2 cut(s) 615, 1450
BccI CCATC 1 cut(s) 1316
BceAI ACGGC 1 cut(s) 992
BclI TGATCA 1 cut(s) 1159
BcoDI GTCTC 1 cut(s) 1478
BfaI CTAG 2 cut(s) 107, 486
BfmI CTRYAG 1 cut(s) 1356
BisI GCNGC 3 cut(s) 629, 1314, 1439
BlsI GCNGC 3 cut(s) 630, 1315, 1440
Bme18I GGWCC 2 cut(s) 126, 1498
BmeT110I CYCGRG 2 cut(s) 264, 1481
BmgT120I GGNCC 3 cut(s) 126, 1043, 1498
BmiI GGNNCC 3 cut(s) 127, 1142, 1499
BmsI GCATC 4 cut(s) 13, 307, 447, 745
BmtI GCTAGC 1 cut(s) 110
BoxI GACNNNNGTC 1 cut(s) 1490
BplI GAGNNNNNCTC 2 cut(s) 608, 640
BpmI CTGGAG 2 cut(s) 352, 1290
Bpu10I CCTNAGC 1 cut(s) 1385
Bpu14I TTCGAA 1 cut(s) 950
BpuEI CTTGAG 1 cut(s) 865
BsaI GGTCTC 1 cut(s) 1478
BsaJI CCNNGG 2 cut(s) 188, 412
BsaWI WCCGGW 1 cut(s) 128
BsaXI ACNNNNNCTCC 2 cut(s) 1323, 1353
Bsc4I CCNNNNNNNGG 2 cut(s) 1106, 1494
Bse1I ACTGG 1 cut(s) 335
Bse3DI GCAATG 1 cut(s) 117
BseDI CCNNGG 2 cut(s) 188, 412
BseGI GGATG 4 cut(s) 687, 805, 989, 1069
BseLI CCNNNNNNNGG 2 cut(s) 1106, 1494
BseMI GCAATG 1 cut(s) 117
BseMII CTCAG 4 cut(s) 805, 1062, 1119, 1399
BseNI ACTGG 1 cut(s) 335
BseXI GCAGC 2 cut(s) 615, 1450
BseYI CCCAGC 1 cut(s) 1040
BsgI GTGCAG 1 cut(s) 1218
BshFI GGCC 2 cut(s) 1045, 1411
BsiHKCI CYCGRG 2 cut(s) 264, 1481
BsiSI CCGG 2 cut(s) 129, 1501
BslI CCNNNNNNNGG 2 cut(s) 1106, 1494
BsmAI GTCTC 1 cut(s) 1478
BsnI GGCC 2 cut(s) 1045, 1411
Bso31I GGTCTC 1 cut(s) 1478
BsoBI CYCGRG 2 cut(s) 264, 1481
Bsp119I TTCGAA 1 cut(s) 950
Bsp1407I TGTACA 1 cut(s) 247
Bsp143I GATC 3 cut(s) 641, 1074, 1159
Bsp19I CCATGG 1 cut(s) 188
BspACI CCGC 4 cut(s) 1137, 1313, 1342, 1393
BspANI GGCC 2 cut(s) 1045, 1411
BspCNI CTCAG 4 cut(s) 804, 1063, 1118, 1398
BspLI GGNNCC 3 cut(s) 127, 1142, 1499
BspOI GCTAGC 1 cut(s) 110
BspT104I TTCGAA 1 cut(s) 950
BspTNI GGTCTC 1 cut(s) 1478
BsrDI GCAATG 1 cut(s) 117
BsrGI TGTACA 1 cut(s) 247
BsrI ACTGG 1 cut(s) 335
BssECI CCNNGG 2 cut(s) 188, 412
BssMI GATC 3 cut(s) 641, 1074, 1159
BssSI CACGAG 1 cut(s) 161
BssT1I CCWWGG 2 cut(s) 188, 412
Bst2BI CACGAG 1 cut(s) 161
Bst4CI ACNGT 2 cut(s) 340, 1360
BstAUI TGTACA 1 cut(s) 247
BstBI TTCGAA 1 cut(s) 950
BstC8I GCNNGC 3 cut(s) 108, 819, 1237
BstDSI CCRYGG 1 cut(s) 188
BstF5I GGATG 4 cut(s) 687, 805, 989, 1069
BstHHI GCGC 1 cut(s) 540
BstKTI GATC 3 cut(s) 644, 1077, 1162
BstMAI GTCTC 1 cut(s) 1478
BstMBI GATC 3 cut(s) 641, 1074, 1159
BstMWI GCNNNNNNNGC 1 cut(s) 1390
BstNSI RCATGY 1 cut(s) 254
BstPAI GACNNNNGTC 1 cut(s) 1490
BstSFI CTRYAG 1 cut(s) 1356
BstV1I GCAGC 2 cut(s) 615, 1450
BsuRI GGCC 2 cut(s) 1045, 1411
BtgI CCRYGG 1 cut(s) 188
BtgZI GCGATG 1 cut(s) 768
BtsCI GGATG 4 cut(s) 687, 805, 989, 1069
BtsIMutI CAGTG 1 cut(s) 726
Cac8I GCNNGC 3 cut(s) 108, 819, 1237
CfoI GCGC 1 cut(s) 540
Cfr13I GGNCC 3 cut(s) 126, 1043, 1498
Csp6I GTAC 3 cut(s) 248, 489, 695
CviAII CATG 7 cut(s) 152, 189, 251, 542, 916, 977, 984
CviQI GTAC 3 cut(s) 248, 489, 695
DpnI GATC 3 cut(s) 643, 1076, 1161
DpnII GATC 3 cut(s) 641, 1074, 1159
DraI TTTAAA 1 cut(s) 31
DraIII CACNNNGTG 1 cut(s) 609
Eco130I CCWWGG 2 cut(s) 188, 412
Eco31I GGTCTC 1 cut(s) 1478
Eco47I GGWCC 2 cut(s) 126, 1498
Eco57I CTGAAG 1 cut(s) 807
Eco88I CYCGRG 2 cut(s) 264, 1481
EcoT14I CCWWGG 2 cut(s) 188, 412
ErhI CCWWGG 2 cut(s) 188, 412
FaeI CATG 7 cut(s) 155, 192, 254, 545, 919, 980, 987
FalI AAGNNNNNCTT 2 cut(s) 10, 42
FatI CATG 7 cut(s) 151, 188, 250, 541, 915, 976, 983
FauI CCCGC 2 cut(s) 1130, 1386
FbaI TGATCA 1 cut(s) 1159
Fnu4HI GCNGC 3 cut(s) 629, 1314, 1439
FokI GGATG 4 cut(s) 694, 812, 976, 1076
Fsp4HI GCNGC 3 cut(s) 629, 1314, 1439
FspBI CTAG 2 cut(s) 107, 486
GlaI GCGC 1 cut(s) 539
GluI GCNGC 3 cut(s) 629, 1314, 1439
GsaI CCCAGC 1 cut(s) 1044
GsuI CTGGAG 2 cut(s) 352, 1290
HaeIII GGCC 2 cut(s) 1045, 1411
HapII CCGG 2 cut(s) 129, 1501
HhaI GCGC 1 cut(s) 540
Hin1II CATG 7 cut(s) 155, 192, 254, 545, 919, 980, 987
Hin6I GCGC 1 cut(s) 538
HinP1I GCGC 1 cut(s) 538
HincII GTYRAC 1 cut(s) 913
HindII GTYRAC 1 cut(s) 913
HindIII AAGCTT 2 cut(s) 303, 1088
HinfI GANTC 5 cut(s) 4, 140, 589, 899, 1058
HpaII CCGG 2 cut(s) 129, 1501
HphI GGTGA 2 cut(s) 820, 1138
Hpy166II GTNNAC 3 cut(s) 491, 913, 1331
Hpy188I TCNGA 5 cut(s) 145, 207, 898, 1063, 1245
Hpy188III TCNNGA 7 cut(s) 163, 266, 551, 1112, 1269, 1387, 1483
Hpy8I GTNNAC 3 cut(s) 491, 913, 1331
HpyAV CCTTC 8 cut(s) 96, 232, 607, 799, 829, 913, 1056, 1175
HpyCH4III ACNGT 2 cut(s) 340, 1360
HpyCH4V TGCA 9 cut(s) 298, 460, 758, 779, 860, 970, 1235, 1303, 1364
HpyF10VI GCNNNNNNNGC 1 cut(s) 1390
Hsp92II CATG 7 cut(s) 155, 192, 254, 545, 919, 980, 987
HspAI GCGC 1 cut(s) 538
Ksp22I TGATCA 1 cut(s) 1159
Kzo9I GATC 3 cut(s) 641, 1074, 1159
Lsp1109I GCAGC 2 cut(s) 615, 1450
LweI GCATC 4 cut(s) 13, 307, 447, 745
MaeI CTAG 2 cut(s) 107, 486
MaeIII GTNAC 2 cut(s) 278, 424
MalI GATC 3 cut(s) 643, 1076, 1161
MboI GATC 3 cut(s) 641, 1074, 1159
MboII GAAGA 1 cut(s) 1085
MluCI AATT 8 cut(s) 476, 579, 673, 767, 953, 1153, 1202, 1430
MlyI GAGTC 1 cut(s) 893
MmeI TCCRAC 3 cut(s) 79, 1170, 1176
MseI TTAA 5 cut(s) 30, 258, 831, 1217, 1298
MslI CAYNNNNRTG 1 cut(s) 975
MspA1I CMGCKG 2 cut(s) 1137, 1441
MspI CCGG 2 cut(s) 129, 1501
MwoI GCNNNNNNNGC 1 cut(s) 1390
NcoI CCATGG 1 cut(s) 188
NdeII GATC 3 cut(s) 641, 1074, 1159
NheI GCTAGC 1 cut(s) 106
NlaIII CATG 7 cut(s) 155, 192, 254, 545, 919, 980, 987
NlaIV GGNNCC 3 cut(s) 127, 1142, 1499
NmuCI GTSAC 1 cut(s) 424
NspI RCATGY 1 cut(s) 254
NspV TTCGAA 1 cut(s) 950
PaeR7I CTCGAG 2 cut(s) 264, 1481
PciI ACATGT 1 cut(s) 250
PfeI GAWTC 4 cut(s) 4, 140, 589, 1058
PflMI CCANNNNNTGG 1 cut(s) 1494
PkrI GCNGC 3 cut(s) 630, 1315, 1440
PleI GAGTC 1 cut(s) 893
PpsI GAGTC 1 cut(s) 893
PscI ACATGT 1 cut(s) 250
PshAI GACNNNNGTC 1 cut(s) 1490
PshBI ATTAAT 1 cut(s) 258
PspFI CCCAGC 1 cut(s) 1040
PspN4I GGNNCC 3 cut(s) 127, 1142, 1499
PspPI GGNCC 3 cut(s) 126, 1043, 1498
PvuII CAGCTG 1 cut(s) 1441
RsaI GTAC 3 cut(s) 249, 490, 696
RsaNI GTAC 3 cut(s) 248, 489, 695
RseI CAYNNNNRTG 1 cut(s) 975
SaqAI TTAA 5 cut(s) 30, 258, 831, 1217, 1298
SatI GCNGC 3 cut(s) 629, 1314, 1439
Sau3AI GATC 3 cut(s) 641, 1074, 1159
Sau96I GGNCC 3 cut(s) 126, 1043, 1498
SchI GAGTC 1 cut(s) 893
SfaNI GCATC 4 cut(s) 13, 307, 447, 745
SfcI CTRYAG 1 cut(s) 1356
Sfr274I CTCGAG 2 cut(s) 264, 1481
SfuI TTCGAA 1 cut(s) 950
SinI GGWCC 2 cut(s) 126, 1498
SlaI CTCGAG 2 cut(s) 264, 1481
SmiMI CAYNNNNRTG 1 cut(s) 975
SmlI CTYRAG 3 cut(s) 264, 880, 1481
SmoI CTYRAG 3 cut(s) 264, 880, 1481
Sse9I AATT 8 cut(s) 476, 579, 673, 767, 953, 1153, 1202, 1430
SsiI CCGC 4 cut(s) 1137, 1313, 1342, 1393
SspI AATATT 1 cut(s) 1263
SspMI CTAG 2 cut(s) 107, 486
StyI CCWWGG 2 cut(s) 188, 412
TaaI ACNGT 2 cut(s) 340, 1360
TaqI TCGA 3 cut(s) 265, 950, 1482
TasI AATT 8 cut(s) 476, 579, 673, 767, 953, 1153, 1202, 1430
TatI WGTACW 3 cut(s) 247, 488, 694
TauI GCSGC 1 cut(s) 1316
TfiI GAWTC 4 cut(s) 4, 140, 589, 1058
Tru1I TTAA 5 cut(s) 30, 258, 831, 1217, 1298
Tru9I TTAA 5 cut(s) 30, 258, 831, 1217, 1298
TscAI CASTG 1 cut(s) 733
TseFI GTSAC 1 cut(s) 424
TseI GCWGC 2 cut(s) 628, 1438
Tsp45I GTSAC 1 cut(s) 424
TspDTI ATGAA 6 cut(s) 190, 433, 932, 954, 965, 978
TspGWI ACGGA 3 cut(s) 395, 727, 758
TspRI CASTG 1 cut(s) 733
Van91I CCANNNNNTGG 1 cut(s) 1494
VpaK11BI GGWCC 2 cut(s) 126, 1498
VspI ATTAAT 1 cut(s) 258
XapI RAATTY 5 cut(s) 476, 767, 1153, 1202, 1430
XceI RCATGY 1 cut(s) 254
XcmI CCANNNNNNNNNTGG 1 cut(s) 1108
XhoI CTCGAG 2 cut(s) 264, 1481
XspI CTAG 2 cut(s) 107, 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.