TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 330 |
| AclI | AACGTT | 1 cut(s) | 72 |
| AclWI | GGATC | 1 cut(s) | 977 |
| AcsI | RAATTY | 3 cut(s) | 204, 340, 670 |
| AcuI | CTGAAG | 1 cut(s) | 773 |
| AcyI | GRCGYC | 2 cut(s) | 213, 1339 |
| AfaI | GTAC | 2 cut(s) | 404, 1481 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 60, 1167 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 946 |
| AjnI | CCWGG | 3 cut(s) | 397, 1192, 1296 |
| Alw21I | GWGCWC | 2 cut(s) | 703, 1017 |
| Alw26I | GTCTC | 3 cut(s) | 228, 556, 850 |
| AlwI | GGATC | 1 cut(s) | 977 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 790 |
| Ama87I | CYCGRG | 1 cut(s) | 986 |
| AoxI | GGCC | 2 cut(s) | 39, 1062 |
| ApeKI | GCWGC | 2 cut(s) | 581, 1000 |
| ApoI | RAATTY | 3 cut(s) | 204, 340, 670 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 29, 61 |
| AseI | ATTAAT | 1 cut(s) | 1374 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1064 |
| AspLEI | GCGC | 1 cut(s) | 1221 |
| AspS9I | GGNCC | 1 cut(s) | 487 |
| AsuHPI | GGTGA | 2 cut(s) | 194, 1339 |
| AvaI | CYCGRG | 1 cut(s) | 986 |
| AvaII | GGWCC | 1 cut(s) | 487 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 394, 427 |
| BanII | GRGCYC | 2 cut(s) | 703, 1017 |
| Bbv12I | GWGCWC | 2 cut(s) | 703, 1017 |
| BbvI | GCAGC | 2 cut(s) | 593, 987 |
| BccI | CCATC | 1 cut(s) | 225 |
| BciT130I | CCWGG | 3 cut(s) | 399, 1194, 1298 |
| BclI | TGATCA | 2 cut(s) | 978, 1527 |
| BcoDI | GTCTC | 3 cut(s) | 228, 556, 850 |
| BfaI | CTAG | 1 cut(s) | 300 |
| BfmI | CTRYAG | 2 cut(s) | 378, 782 |
| BfoI | RGCGCY | 1 cut(s) | 1222 |
| BglII | AGATCT | 3 cut(s) | 268, 511, 1088 |
| BisI | GCNGC | 2 cut(s) | 582, 1001 |
| BlsI | GCNGC | 2 cut(s) | 583, 1002 |
| Bme1390I | CCNGG | 3 cut(s) | 399, 1194, 1298 |
| Bme18I | GGWCC | 1 cut(s) | 487 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 946 |
| BmeT110I | CYCGRG | 1 cut(s) | 986 |
| BmgT120I | GGNCC | 1 cut(s) | 487 |
| BmiI | GGNNCC | 2 cut(s) | 489, 1110 |
| BmrFI | CCNGG | 3 cut(s) | 399, 1194, 1298 |
| BmrI | ACTGGG | 1 cut(s) | 816 |
| BmsI | GCATC | 5 cut(s) | 142, 484, 630, 877, 1506 |
| BmuI | ACTGGG | 1 cut(s) | 816 |
| BpmI | CTGGAG | 1 cut(s) | 381 |
| BsaBI | GATNNNNATC | 1 cut(s) | 564 |
| BsaHI | GRCGYC | 2 cut(s) | 213, 1339 |
| BsaI | GGTCTC | 1 cut(s) | 556 |
| BsaJI | CCNNGG | 3 cut(s) | 398, 1055, 1323 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 258, 288 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 60, 1167 |
| Bse1I | ACTGG | 6 cut(s) | 341, 489, 691, 811, 1336, 1387 |
| Bse3DI | GCAATG | 1 cut(s) | 981 |
| Bse8I | GATNNNNATC | 1 cut(s) | 564 |
| BseBI | CCWGG | 3 cut(s) | 399, 1194, 1298 |
| BseDI | CCNNGG | 3 cut(s) | 398, 1055, 1323 |
| BseGI | GGATG | 3 cut(s) | 157, 389, 1306 |
| BseJI | GATNNNNATC | 1 cut(s) | 564 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 60, 1167 |
| BseMI | GCAATG | 1 cut(s) | 981 |
| BseMII | CTCAG | 3 cut(s) | 84, 599, 1002 |
| BseNI | ACTGG | 6 cut(s) | 341, 489, 691, 811, 1336, 1387 |
| BseRI | GAGGAG | 1 cut(s) | 38 |
| BseXI | GCAGC | 2 cut(s) | 593, 987 |
| BsgI | GTGCAG | 1 cut(s) | 715 |
| BshFI | GGCC | 2 cut(s) | 41, 1064 |
| BsiHKAI | GWGCWC | 2 cut(s) | 703, 1017 |
| BsiHKCI | CYCGRG | 1 cut(s) | 986 |
| BslFI | GGGAC | 1 cut(s) | 473 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 60, 1167 |
| BsmAI | GTCTC | 3 cut(s) | 228, 556, 850 |
| BsmFI | GGGAC | 1 cut(s) | 473 |
| BsmI | GAATGC | 1 cut(s) | 280 |
| BsnI | GGCC | 2 cut(s) | 41, 1064 |
| Bso31I | GGTCTC | 1 cut(s) | 556 |
| BsoBI | CYCGRG | 1 cut(s) | 986 |
| Bsp1286I | GDGCHC | 2 cut(s) | 703, 1017 |
| Bsp1407I | TGTACA | 1 cut(s) | 1479 |
| Bsp143I | GATC | 6 cut(s) | 268, 511, 969, 978, 1088, 1527 |
| Bsp19I | CCATGG | 2 cut(s) | 1055, 1323 |
| BspANI | GGCC | 2 cut(s) | 41, 1064 |
| BspCNI | CTCAG | 3 cut(s) | 85, 598, 1003 |
| BspHI | TCATGA | 1 cut(s) | 1512 |
| BspLI | GGNNCC | 2 cut(s) | 489, 1110 |
| BspPI | GGATC | 1 cut(s) | 977 |
| BspTNI | GGTCTC | 1 cut(s) | 556 |
| BsrDI | GCAATG | 1 cut(s) | 981 |
| BsrGI | TGTACA | 1 cut(s) | 1479 |
| BsrI | ACTGG | 6 cut(s) | 341, 489, 691, 811, 1336, 1387 |
| BssECI | CCNNGG | 3 cut(s) | 398, 1055, 1323 |
| BssMI | GATC | 6 cut(s) | 268, 511, 969, 978, 1088, 1527 |
| BssNI | GRCGYC | 2 cut(s) | 213, 1339 |
| BssT1I | CCWWGG | 2 cut(s) | 1055, 1323 |
| Bst2UI | CCWGG | 3 cut(s) | 399, 1194, 1298 |
| BstACI | GRCGYC | 2 cut(s) | 213, 1339 |
| BstAUI | TGTACA | 1 cut(s) | 1479 |
| BstC8I | GCNNGC | 1 cut(s) | 931 |
| BstDEI | CTNAG | 4 cut(s) | 93, 585, 875, 1011 |
| BstDSI | CCRYGG | 2 cut(s) | 1055, 1323 |
| BstF5I | GGATG | 3 cut(s) | 157, 389, 1306 |
| BstH2I | RGCGCY | 1 cut(s) | 1222 |
| BstHHI | GCGC | 1 cut(s) | 1221 |
| BstKTI | GATC | 6 cut(s) | 271, 514, 972, 981, 1091, 1530 |
| BstMAI | GTCTC | 3 cut(s) | 228, 556, 850 |
| BstMBI | GATC | 6 cut(s) | 268, 511, 969, 978, 1088, 1527 |
| BstNI | CCWGG | 3 cut(s) | 399, 1194, 1298 |
| BstSCI | CCNGG | 3 cut(s) | 397, 1192, 1296 |
| BstSFI | CTRYAG | 2 cut(s) | 378, 782 |
| BstV1I | GCAGC | 2 cut(s) | 593, 987 |
| BstX2I | RGATCY | 3 cut(s) | 268, 511, 1088 |
| BstYI | RGATCY | 3 cut(s) | 268, 511, 1088 |
| BsuRI | GGCC | 2 cut(s) | 41, 1064 |
| BtgI | CCRYGG | 2 cut(s) | 1055, 1323 |
| BtsCI | GGATG | 3 cut(s) | 157, 389, 1306 |
| BtsIMutI | CAGTG | 3 cut(s) | 90, 698, 1394 |
| Cac8I | GCNNGC | 1 cut(s) | 931 |
| CaiI | CAGNNNCTG | 1 cut(s) | 790 |
| CciI | TCATGA | 1 cut(s) | 1512 |
| CfoI | GCGC | 1 cut(s) | 1221 |
| Cfr13I | GGNCC | 1 cut(s) | 487 |
| CseI | GACGC | 2 cut(s) | 221, 1328 |
| CsiI | ACCWGGT | 1 cut(s) | 1192 |
| Csp6I | GTAC | 2 cut(s) | 403, 1480 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1452, 1487 |
| CviAII | CATG | 5 cut(s) | 1056, 1133, 1324, 1468, 1513 |
| CviQI | GTAC | 2 cut(s) | 403, 1480 |
| DdeI | CTNAG | 4 cut(s) | 93, 585, 875, 1011 |
| DpnI | GATC | 6 cut(s) | 270, 513, 971, 980, 1090, 1529 |
| DpnII | GATC | 6 cut(s) | 268, 511, 969, 978, 1088, 1527 |
| DriI | GACNNNNNGTC | 1 cut(s) | 946 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 946 |
| Ecl136II | GAGCTC | 2 cut(s) | 701, 1015 |
| Eco130I | CCWWGG | 2 cut(s) | 1055, 1323 |
| Eco147I | AGGCCT | 1 cut(s) | 1064 |
| Eco24I | GRGCYC | 2 cut(s) | 703, 1017 |
| Eco31I | GGTCTC | 1 cut(s) | 556 |
| Eco47I | GGWCC | 1 cut(s) | 487 |
| Eco53kI | GAGCTC | 2 cut(s) | 701, 1015 |
| Eco57I | CTGAAG | 1 cut(s) | 773 |
| Eco88I | CYCGRG | 1 cut(s) | 986 |
| EcoICRI | GAGCTC | 2 cut(s) | 701, 1015 |
| EcoRI | GAATTC | 1 cut(s) | 670 |
| EcoRII | CCWGG | 3 cut(s) | 397, 1192, 1296 |
| EcoT14I | CCWWGG | 2 cut(s) | 1055, 1323 |
| EcoT38I | GRGCYC | 2 cut(s) | 703, 1017 |
| ErhI | CCWWGG | 2 cut(s) | 1055, 1323 |
| FaeI | CATG | 5 cut(s) | 1059, 1136, 1327, 1471, 1516 |
| FaqI | GGGAC | 1 cut(s) | 473 |
| FatI | CATG | 5 cut(s) | 1055, 1132, 1323, 1467, 1512 |
| FbaI | TGATCA | 2 cut(s) | 978, 1527 |
| FblI | GTMKAC | 1 cut(s) | 330 |
| Fnu4HI | GCNGC | 2 cut(s) | 582, 1001 |
| FokI | GGATG | 3 cut(s) | 164, 396, 1313 |
| FriOI | GRGCYC | 2 cut(s) | 703, 1017 |
| Fsp4HI | GCNGC | 2 cut(s) | 582, 1001 |
| FspBI | CTAG | 1 cut(s) | 300 |
| GlaI | GCGC | 1 cut(s) | 1220 |
| GluI | GCNGC | 2 cut(s) | 582, 1001 |
| GsuI | CTGGAG | 1 cut(s) | 381 |
| HaeII | RGCGCY | 1 cut(s) | 1222 |
| HaeIII | GGCC | 2 cut(s) | 41, 1064 |
| HgaI | GACGC | 2 cut(s) | 221, 1328 |
| HhaI | GCGC | 1 cut(s) | 1221 |
| Hin1I | GRCGYC | 2 cut(s) | 213, 1339 |
| Hin1II | CATG | 5 cut(s) | 1059, 1136, 1327, 1471, 1516 |
| Hin6I | GCGC | 1 cut(s) | 1219 |
| HinP1I | GCGC | 1 cut(s) | 1219 |
| HindIII | AAGCTT | 2 cut(s) | 638, 1037 |
| HphI | GGTGA | 2 cut(s) | 194, 1339 |
| Hpy166II | GTNNAC | 1 cut(s) | 331 |
| Hpy188III | TCNNGA | 8 cut(s) | 300, 346, 515, 767, 1106, 1349, 1402, 1513 |
| Hpy8I | GTNNAC | 1 cut(s) | 331 |
| HpyAV | CCTTC | 7 cut(s) | 343, 960, 1054, 1075, 1232, 1353, 1399 |
| HpyCH4IV | ACGT | 2 cut(s) | 72, 1318 |
| HpyCH4V | TGCA | 5 cut(s) | 90, 696, 725, 1085, 1132 |
| HpyF3I | CTNAG | 4 cut(s) | 93, 585, 875, 1011 |
| HpySE526I | ACGT | 2 cut(s) | 72, 1318 |
| Hsp92I | GRCGYC | 2 cut(s) | 213, 1339 |
| Hsp92II | CATG | 5 cut(s) | 1059, 1136, 1327, 1471, 1516 |
| HspAI | GCGC | 1 cut(s) | 1219 |
| Ksp22I | TGATCA | 2 cut(s) | 978, 1527 |
| Kzo9I | GATC | 6 cut(s) | 268, 511, 969, 978, 1088, 1527 |
| LmnI | GCTCC | 3 cut(s) | 25, 843, 1216 |
| Lsp1109I | GCAGC | 2 cut(s) | 593, 987 |
| LweI | GCATC | 5 cut(s) | 142, 484, 630, 877, 1506 |
| MabI | ACCWGGT | 1 cut(s) | 1192 |
| MaeI | CTAG | 1 cut(s) | 300 |
| MaeII | ACGT | 2 cut(s) | 72, 1318 |
| MaeIII | GTNAC | 3 cut(s) | 793, 1327, 1495 |
| MalI | GATC | 6 cut(s) | 270, 513, 971, 980, 1090, 1529 |
| MboI | GATC | 6 cut(s) | 268, 511, 969, 978, 1088, 1527 |
| MboII | GAAGA | 7 cut(s) | 353, 367, 679, 891, 1316, 1352, 1545 |
| MflI | RGATCY | 3 cut(s) | 268, 511, 1088 |
| MhlI | GDGCHC | 2 cut(s) | 703, 1017 |
| MluCI | AATT | 6 cut(s) | 204, 257, 340, 670, 847, 1441 |
| MlyI | GAGTC | 2 cut(s) | 104, 671 |
| MmeI | TCCRAC | 2 cut(s) | 78, 1203 |
| MnlI | CCTC | 9 cut(s) | 16, 173, 441, 931, 1111, 1129, 1161, 1165, 1440 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1064 |
| MseI | TTAA | 1 cut(s) | 1374 |
| MspR9I | CCNGG | 3 cut(s) | 399, 1194, 1298 |
| Mva1269I | GAATGC | 1 cut(s) | 280 |
| MvaI | CCWGG | 3 cut(s) | 399, 1194, 1298 |
| NcoI | CCATGG | 2 cut(s) | 1055, 1323 |
| NdeII | GATC | 6 cut(s) | 268, 511, 969, 978, 1088, 1527 |
| NlaIII | CATG | 5 cut(s) | 1059, 1136, 1327, 1471, 1516 |
| NlaIV | GGNNCC | 2 cut(s) | 489, 1110 |
| NmuCI | GTSAC | 1 cut(s) | 1327 |
| PagI | TCATGA | 1 cut(s) | 1512 |
| PceI | AGGCCT | 1 cut(s) | 1064 |
| PctI | GAATGC | 1 cut(s) | 280 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1064 |
| PfeI | GAWTC | 8 cut(s) | 320, 358, 374, 466, 740, 787, 907, 1075 |
| PkrI | GCNGC | 2 cut(s) | 583, 1002 |
| PleI | GAGTC | 2 cut(s) | 103, 671 |
| PpsI | GAGTC | 2 cut(s) | 103, 671 |
| PshBI | ATTAAT | 1 cut(s) | 1374 |
| Psp124BI | GAGCTC | 2 cut(s) | 703, 1017 |
| Psp1406I | AACGTT | 1 cut(s) | 72 |
| Psp6I | CCWGG | 3 cut(s) | 397, 1192, 1296 |
| PspGI | CCWGG | 3 cut(s) | 397, 1192, 1296 |
| PspN4I | GGNNCC | 2 cut(s) | 489, 1110 |
| PspPI | GGNCC | 1 cut(s) | 487 |
| PstNI | CAGNNNCTG | 1 cut(s) | 790 |
| PsuI | RGATCY | 3 cut(s) | 268, 511, 1088 |
| RsaI | GTAC | 2 cut(s) | 404, 1481 |
| RsaNI | GTAC | 2 cut(s) | 403, 1480 |
| SacI | GAGCTC | 2 cut(s) | 703, 1017 |
| SaqAI | TTAA | 1 cut(s) | 1374 |
| SatI | GCNGC | 2 cut(s) | 582, 1001 |
| Sau3AI | GATC | 6 cut(s) | 268, 511, 969, 978, 1088, 1527 |
| Sau96I | GGNCC | 1 cut(s) | 487 |
| SchI | GAGTC | 2 cut(s) | 104, 671 |
| ScrFI | CCNGG | 3 cut(s) | 399, 1194, 1298 |
| SduI | GDGCHC | 2 cut(s) | 703, 1017 |
| SexAI | ACCWGGT | 1 cut(s) | 1192 |
| SfaNI | GCATC | 5 cut(s) | 142, 484, 630, 877, 1506 |
| SfcI | CTRYAG | 2 cut(s) | 378, 782 |
| SinI | GGWCC | 1 cut(s) | 487 |
| Sse9I | AATT | 6 cut(s) | 204, 257, 340, 670, 847, 1441 |
| SseBI | AGGCCT | 1 cut(s) | 1064 |
| SspMI | CTAG | 1 cut(s) | 300 |
| SstI | GAGCTC | 2 cut(s) | 703, 1017 |
| StuI | AGGCCT | 1 cut(s) | 1064 |
| StyD4I | CCNGG | 3 cut(s) | 397, 1192, 1296 |
| StyI | CCWWGG | 2 cut(s) | 1055, 1323 |
| TaiI | ACGT | 2 cut(s) | 75, 1321 |
| TaqI | TCGA | 3 cut(s) | 199, 680, 803 |
| TasI | AATT | 6 cut(s) | 204, 257, 340, 670, 847, 1441 |
| TatI | WGTACW | 1 cut(s) | 1479 |
| TfiI | GAWTC | 8 cut(s) | 320, 358, 374, 466, 740, 787, 907, 1075 |
| Tru1I | TTAA | 1 cut(s) | 1374 |
| Tru9I | TTAA | 1 cut(s) | 1374 |
| TscAI | CASTG | 3 cut(s) | 97, 698, 1394 |
| TseFI | GTSAC | 1 cut(s) | 1327 |
| TseI | GCWGC | 2 cut(s) | 581, 1000 |
| Tsp45I | GTSAC | 1 cut(s) | 1327 |
| TspDTI | ATGAA | 5 cut(s) | 17, 554, 1057, 1246, 1317 |
| TspRI | CASTG | 3 cut(s) | 97, 698, 1394 |
| VpaK11BI | GGWCC | 1 cut(s) | 487 |
| VspI | ATTAAT | 1 cut(s) | 1374 |
| XapI | RAATTY | 3 cut(s) | 204, 340, 670 |
| XbaI | TCTAGA | 1 cut(s) | 299 |
| XmiI | GTMKAC | 1 cut(s) | 330 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1064 |
| XspI | CTAG | 1 cut(s) | 300 |