TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 175, 413 |
| AclWI | GGATC | 1 cut(s) | 369 |
| AfaI | GTAC | 1 cut(s) | 372 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 340 |
| AgsI | TTSAA | 3 cut(s) | 204, 408, 547 |
| AjnI | CCWGG | 3 cut(s) | 6, 36, 333 |
| AlwI | GGATC | 1 cut(s) | 369 |
| AoxI | GGCC | 2 cut(s) | 507, 576 |
| ApeKI | GCWGC | 1 cut(s) | 242 |
| AseI | ATTAAT | 1 cut(s) | 423 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 599 |
| AspS9I | GGNCC | 2 cut(s) | 71, 514 |
| AsuHPI | GGTGA | 2 cut(s) | 325, 601 |
| AvaII | GGWCC | 2 cut(s) | 71, 514 |
| BbsI | GAAGAC | 2 cut(s) | 323, 564 |
| BbvI | GCAGC | 1 cut(s) | 229 |
| BccI | CCATC | 3 cut(s) | 116, 290, 320 |
| BciT130I | CCWGG | 3 cut(s) | 8, 38, 335 |
| BfaI | CTAG | 1 cut(s) | 444 |
| BisI | GCNGC | 1 cut(s) | 243 |
| BlsI | GCNGC | 1 cut(s) | 244 |
| Bme1390I | CCNGG | 3 cut(s) | 8, 38, 335 |
| Bme18I | GGWCC | 2 cut(s) | 71, 514 |
| BmgT120I | GGNCC | 2 cut(s) | 71, 514 |
| BmiI | GGNNCC | 1 cut(s) | 332 |
| BmrFI | CCNGG | 3 cut(s) | 8, 38, 335 |
| BmsI | GCATC | 1 cut(s) | 511 |
| BpiI | GAAGAC | 2 cut(s) | 323, 564 |
| BpuEI | CTTGAG | 2 cut(s) | 231, 416 |
| BsaJI | CCNNGG | 3 cut(s) | 334, 510, 573 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 340 |
| BseBI | CCWGG | 3 cut(s) | 8, 38, 335 |
| BseDI | CCNNGG | 3 cut(s) | 334, 510, 573 |
| BseGI | GGATG | 3 cut(s) | 16, 121, 127 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 340 |
| BseMII | CTCAG | 1 cut(s) | 229 |
| BseRI | GAGGAG | 1 cut(s) | 359 |
| BseXI | GCAGC | 1 cut(s) | 229 |
| BshFI | GGCC | 2 cut(s) | 509, 578 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 340 |
| BsnI | GGCC | 2 cut(s) | 509, 578 |
| Bsp143I | GATC | 2 cut(s) | 3, 374 |
| BspACI | CCGC | 2 cut(s) | 175, 413 |
| BspANI | GGCC | 2 cut(s) | 509, 578 |
| BspCNI | CTCAG | 1 cut(s) | 228 |
| BspLI | GGNNCC | 1 cut(s) | 332 |
| BspPI | GGATC | 1 cut(s) | 369 |
| BssECI | CCNNGG | 3 cut(s) | 334, 510, 573 |
| BssMI | GATC | 2 cut(s) | 3, 374 |
| BssT1I | CCWWGG | 2 cut(s) | 510, 573 |
| Bst2UI | CCWGG | 3 cut(s) | 8, 38, 335 |
| Bst4CI | ACNGT | 6 cut(s) | 183, 322, 370, 390, 452, 600 |
| Bst6I | CTCTTC | 1 cut(s) | 102 |
| BstDEI | CTNAG | 1 cut(s) | 215 |
| BstF5I | GGATG | 3 cut(s) | 16, 121, 127 |
| BstKTI | GATC | 2 cut(s) | 6, 377 |
| BstMBI | GATC | 2 cut(s) | 3, 374 |
| BstNI | CCWGG | 3 cut(s) | 8, 38, 335 |
| BstSCI | CCNGG | 3 cut(s) | 6, 36, 333 |
| BstV1I | GCAGC | 1 cut(s) | 229 |
| BstV2I | GAAGAC | 2 cut(s) | 323, 564 |
| BsuRI | GGCC | 2 cut(s) | 509, 578 |
| BtsCI | GGATG | 3 cut(s) | 16, 121, 127 |
| BtsIMutI | CAGTG | 2 cut(s) | 366, 448 |
| Cfr13I | GGNCC | 2 cut(s) | 71, 514 |
| Csp6I | GTAC | 1 cut(s) | 371 |
| CviJI | RGCY | 5 cut(s) | 36, 443, 509, 572, 578 |
| CviKI_1 | RGCY | 5 cut(s) | 36, 443, 509, 572, 578 |
| CviQI | GTAC | 1 cut(s) | 371 |
| DdeI | CTNAG | 1 cut(s) | 215 |
| DpnI | GATC | 2 cut(s) | 5, 376 |
| DpnII | GATC | 2 cut(s) | 3, 374 |
| Eam1104I | CTCTTC | 1 cut(s) | 102 |
| EarI | CTCTTC | 1 cut(s) | 102 |
| Eco130I | CCWWGG | 2 cut(s) | 510, 573 |
| Eco147I | AGGCCT | 1 cut(s) | 509 |
| Eco47I | GGWCC | 2 cut(s) | 71, 514 |
| EcoRII | CCWGG | 3 cut(s) | 6, 36, 333 |
| EcoT14I | CCWWGG | 2 cut(s) | 510, 573 |
| ErhI | CCWWGG | 2 cut(s) | 510, 573 |
| FauNDI | CATATG | 1 cut(s) | 238 |
| Fnu4HI | GCNGC | 1 cut(s) | 243 |
| FokI | GGATG | 3 cut(s) | 23, 128, 134 |
| Fsp4HI | GCNGC | 1 cut(s) | 243 |
| FspBI | CTAG | 1 cut(s) | 444 |
| GluI | GCNGC | 1 cut(s) | 243 |
| HaeIII | GGCC | 2 cut(s) | 509, 578 |
| HincII | GTYRAC | 1 cut(s) | 386 |
| HindII | GTYRAC | 1 cut(s) | 386 |
| HinfI | GANTC | 3 cut(s) | 200, 211, 494 |
| HphI | GGTGA | 2 cut(s) | 325, 601 |
| Hpy166II | GTNNAC | 2 cut(s) | 101, 386 |
| Hpy188III | TCNNGA | 1 cut(s) | 293 |
| Hpy8I | GTNNAC | 2 cut(s) | 101, 386 |
| HpyAV | CCTTC | 2 cut(s) | 106, 304 |
| HpyCH4III | ACNGT | 6 cut(s) | 183, 322, 370, 390, 452, 600 |
| HpyCH4IV | ACGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 1 cut(s) | 257 |
| HpyF3I | CTNAG | 1 cut(s) | 215 |
| HpySE526I | ACGT | 1 cut(s) | 127 |
| Kzo9I | GATC | 2 cut(s) | 3, 374 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 5 cut(s) | 20, 23, 50, 320, 347 |
| Lsp1109I | GCAGC | 1 cut(s) | 229 |
| LweI | GCATC | 1 cut(s) | 511 |
| MaeI | CTAG | 1 cut(s) | 444 |
| MaeII | ACGT | 1 cut(s) | 127 |
| MaeIII | GTNAC | 1 cut(s) | 390 |
| MalI | GATC | 2 cut(s) | 5, 376 |
| MboI | GATC | 2 cut(s) | 3, 374 |
| MboII | GAAGA | 5 cut(s) | 55, 119, 328, 569, 604 |
| MfeI | CAATTG | 1 cut(s) | 379 |
| MluCI | AATT | 2 cut(s) | 379, 420 |
| MlyI | GAGTC | 1 cut(s) | 503 |
| MnlI | CCTC | 7 cut(s) | 112, 142, 256, 337, 340, 499, 580 |
| MroXI | GAANNNNTTC | 1 cut(s) | 599 |
| MseI | TTAA | 3 cut(s) | 24, 54, 423 |
| MspR9I | CCNGG | 3 cut(s) | 8, 38, 335 |
| MunI | CAATTG | 1 cut(s) | 379 |
| MvaI | CCWGG | 3 cut(s) | 8, 38, 335 |
| NdeI | CATATG | 1 cut(s) | 238 |
| NdeII | GATC | 2 cut(s) | 3, 374 |
| NlaIV | GGNNCC | 1 cut(s) | 332 |
| NmuCI | GTSAC | 1 cut(s) | 390 |
| PceI | AGGCCT | 1 cut(s) | 509 |
| PdmI | GAANNNNTTC | 1 cut(s) | 599 |
| PfeI | GAWTC | 2 cut(s) | 200, 211 |
| PflFI | GACNNNGTC | 1 cut(s) | 129 |
| PfoI | TCCNGGA | 1 cut(s) | 6 |
| PkrI | GCNGC | 1 cut(s) | 244 |
| PleI | GAGTC | 1 cut(s) | 502 |
| PpsI | GAGTC | 1 cut(s) | 502 |
| PshBI | ATTAAT | 1 cut(s) | 423 |
| Psp6I | CCWGG | 3 cut(s) | 6, 36, 333 |
| PspGI | CCWGG | 3 cut(s) | 6, 36, 333 |
| PspN4I | GGNNCC | 1 cut(s) | 332 |
| PspPI | GGNCC | 2 cut(s) | 71, 514 |
| PsyI | GACNNNGTC | 1 cut(s) | 129 |
| RsaI | GTAC | 1 cut(s) | 372 |
| RsaNI | GTAC | 1 cut(s) | 371 |
| SaqAI | TTAA | 3 cut(s) | 24, 54, 423 |
| SatI | GCNGC | 1 cut(s) | 243 |
| Sau3AI | GATC | 2 cut(s) | 3, 374 |
| Sau96I | GGNCC | 2 cut(s) | 71, 514 |
| SchI | GAGTC | 1 cut(s) | 503 |
| ScrFI | CCNGG | 3 cut(s) | 8, 38, 335 |
| SetI | ASST | 4 cut(s) | 130, 153, 315, 591 |
| SfaNI | GCATC | 1 cut(s) | 511 |
| SinI | GGWCC | 2 cut(s) | 71, 514 |
| SmlI | CTYRAG | 2 cut(s) | 246, 395 |
| SmoI | CTYRAG | 2 cut(s) | 246, 395 |
| Sse9I | AATT | 2 cut(s) | 379, 420 |
| SseBI | AGGCCT | 1 cut(s) | 509 |
| SsiI | CCGC | 2 cut(s) | 175, 413 |
| SspMI | CTAG | 1 cut(s) | 444 |
| StuI | AGGCCT | 1 cut(s) | 509 |
| StyD4I | CCNGG | 3 cut(s) | 6, 36, 333 |
| StyI | CCWWGG | 2 cut(s) | 510, 573 |
| TaaI | ACNGT | 6 cut(s) | 183, 322, 370, 390, 452, 600 |
| TaiI | ACGT | 1 cut(s) | 130 |
| TaqI | TCGA | 3 cut(s) | 133, 261, 603 |
| TaqII | GACCGA | 1 cut(s) | 59 |
| TasI | AATT | 2 cut(s) | 379, 420 |
| TfiI | GAWTC | 2 cut(s) | 200, 211 |
| Tru1I | TTAA | 3 cut(s) | 24, 54, 423 |
| Tru9I | TTAA | 3 cut(s) | 24, 54, 423 |
| TscAI | CASTG | 2 cut(s) | 373, 455 |
| TseFI | GTSAC | 1 cut(s) | 390 |
| TseI | GCWGC | 1 cut(s) | 242 |
| Tsp45I | GTSAC | 1 cut(s) | 390 |
| TspDTI | ATGAA | 2 cut(s) | 486, 570 |
| TspRI | CASTG | 2 cut(s) | 373, 455 |
| Tth111I | GACNNNGTC | 1 cut(s) | 129 |
| VpaK11BI | GGWCC | 2 cut(s) | 71, 514 |
| VspI | ATTAAT | 1 cut(s) | 423 |
| XmnI | GAANNNNTTC | 1 cut(s) | 599 |
| XspI | CTAG | 1 cut(s) | 444 |