TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 81, 2060, 3770, 7056 |
| AarI | CACCTGC | 3 cut(s) | 79, 3905, 6573 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 415 |
| Acc16I | TGCGCA | 1 cut(s) | 5572 |
| Acc36I | ACCTGC | 4 cut(s) | 79, 3905, 4594, 6573 |
| Acc65I | GGTACC | 1 cut(s) | 4571 |
| AccB1I | GGYRCC | 2 cut(s) | 4571, 4628 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 1085, 2736, 3012, 3247 |
| AccI | GTMKAC | 2 cut(s) | 791, 4402 |
| AccII | CGCG | 1 cut(s) | 3936 |
| AccIII | TCCGGA | 1 cut(s) | 599 |
| AciI | CCGC | 7 cut(s) | 1304, 2387, 5259, 5390, 5650, 5729, 7310 |
| AclI | AACGTT | 2 cut(s) | 383, 906 |
| AclWI | GGATC | 7 cut(s) | 357, 1972, 3054, 3225, 5598, 6150, 7807 |
| AcoI | YGGCCR | 5 cut(s) | 2544, 2578, 3014, 5091, 7697 |
| AcyI | GRCGYC | 1 cut(s) | 7494 |
| AdeI | CACNNNGTG | 1 cut(s) | 5100 |
| AflII | CTTAAG | 2 cut(s) | 7216, 7499 |
| AflIII | ACRYGT | 1 cut(s) | 3484 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3453 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1340, 1372, 4289, 4321, 5691, 5723 |
| AleI | CACNNNNGTG | 1 cut(s) | 4682 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 3209, 3241, 5173, 5205 |
| Alw21I | GWGCWC | 7 cut(s) | 175, 211, 635, 817, 1886, 4862, 4938 |
| Alw44I | GTGCAC | 2 cut(s) | 631, 813 |
| AlwI | GGATC | 7 cut(s) | 357, 1972, 3054, 3225, 5598, 6150, 7807 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1085, 7970 |
| Ama87I | CYCGRG | 3 cut(s) | 168, 344, 6872 |
| Aor13HI | TCCGGA | 1 cut(s) | 599 |
| ApaLI | GTGCAC | 2 cut(s) | 631, 813 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 5900, 5932, 6571, 6603, 7937, 7969 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 981, 2573, 2666, 2779, 3523, 6950 |
| Asp718I | GGTACC | 1 cut(s) | 4571 |
| AspLEI | GCGC | 4 cut(s) | 5573, 6104, 7122, 7889 |
| AsuC2I | CCSGG | 8 cut(s) | 345, 346, 692, 745, 2548, 3301, 3965, 7891 |
| AsuII | TTCGAA | 1 cut(s) | 3228 |
| AsuNHI | GCTAGC | 1 cut(s) | 7546 |
| AvaI | CYCGRG | 3 cut(s) | 168, 344, 6872 |
| AvaII | GGWCC | 7 cut(s) | 417, 1016, 2045, 2488, 4144, 6876, 7599 |
| BaeGI | GKGCMC | 3 cut(s) | 635, 817, 898 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 6687, 6720 |
| BalI | TGGCCA | 2 cut(s) | 3016, 5093 |
| BanI | GGYRCC | 2 cut(s) | 4571, 4628 |
| BanII | GRGCYC | 2 cut(s) | 1886, 4938 |
| BarI | GAAGNNNNNNTAC | 8 cut(s) | 4062, 4094, 5167, 5199, 5793, 5825, 7107, 7139 |
| BauI | CACGAG | 1 cut(s) | 1187 |
| BbsI | GAAGAC | 5 cut(s) | 63, 2297, 2538, 3311, 6678 |
| Bbv12I | GWGCWC | 7 cut(s) | 175, 211, 635, 817, 1886, 4862, 4938 |
| BceAI | ACGGC | 2 cut(s) | 6869, 7712 |
| BciVI | GTATCC | 1 cut(s) | 4222 |
| BclI | TGATCA | 1 cut(s) | 4114 |
| BcnI | CCSGG | 8 cut(s) | 345, 346, 692, 745, 2548, 3301, 3965, 7891 |
| BfmI | CTRYAG | 5 cut(s) | 877, 1562, 5241, 6189, 7551 |
| BfoI | RGCGCY | 2 cut(s) | 6105, 7123 |
| BfrI | CTTAAG | 2 cut(s) | 7216, 7499 |
| BfuAI | ACCTGC | 4 cut(s) | 79, 3905, 4594, 6573 |
| BfuI | GTATCC | 1 cut(s) | 4222 |
| BglII | AGATCT | 3 cut(s) | 3746, 4150, 6606 |
| BmcAI | AGTACT | 1 cut(s) | 6046 |
| Bme18I | GGWCC | 7 cut(s) | 417, 1016, 2045, 2488, 4144, 6876, 7599 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3453 |
| BmeT110I | CYCGRG | 3 cut(s) | 168, 344, 6872 |
| BmrI | ACTGGG | 1 cut(s) | 3686 |
| BmtI | GCTAGC | 1 cut(s) | 7550 |
| BmuI | ACTGGG | 1 cut(s) | 3686 |
| BpiI | GAAGAC | 5 cut(s) | 63, 2297, 2538, 3311, 6678 |
| BpmI | CTGGAG | 6 cut(s) | 316, 4488, 4542, 5582, 6336, 7087 |
| Bpu10I | CCTNAGC | 1 cut(s) | 6644 |
| Bpu14I | TTCGAA | 1 cut(s) | 3228 |
| BpuEI | CTTGAG | 5 cut(s) | 1218, 2205, 2812, 3005, 4721 |
| BpuMI | CCSGG | 8 cut(s) | 345, 346, 692, 745, 2548, 3301, 3965, 7891 |
| BsaAI | YACGTR | 1 cut(s) | 5124 |
| BsaBI | GATNNNNATC | 1 cut(s) | 6141 |
| BsaHI | GRCGYC | 1 cut(s) | 7494 |
| BsaI | GGTCTC | 3 cut(s) | 2734, 5678, 6439 |
| BsaWI | WCCGGW | 3 cut(s) | 599, 4574, 6878 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3773, 3803, 7029, 7059 |
| Bse118I | RCCGGY | 2 cut(s) | 4397, 5150 |
| Bse3DI | GCAATG | 7 cut(s) | 1180, 1698, 1840, 2422, 5022, 5733, 6867 |
| Bse8I | GATNNNNATC | 1 cut(s) | 6141 |
| BseAI | TCCGGA | 1 cut(s) | 599 |
| BseJI | GATNNNNATC | 1 cut(s) | 6141 |
| BseMI | GCAATG | 7 cut(s) | 1180, 1698, 1840, 2422, 5022, 5733, 6867 |
| BseMII | CTCAG | 7 cut(s) | 662, 2203, 4105, 5955, 6474, 6624, 7667 |
| BseRI | GAGGAG | 6 cut(s) | 2096, 3578, 3581, 5054, 5909, 7525 |
| BseSI | GKGCMC | 3 cut(s) | 635, 817, 898 |
| BseYI | CCCAGC | 2 cut(s) | 5348, 7447 |
| BsgI | GTGCAG | 1 cut(s) | 1713 |
| Bsh1236I | CGCG | 1 cut(s) | 3936 |
| BshNI | GGYRCC | 2 cut(s) | 4571, 4628 |
| BsiHKAI | GWGCWC | 7 cut(s) | 175, 211, 635, 817, 1886, 4862, 4938 |
| BsiHKCI | CYCGRG | 3 cut(s) | 168, 344, 6872 |
| BsiWI | CGTACG | 1 cut(s) | 4895 |
| BslFI | GGGAC | 9 cut(s) | 421, 434, 721, 835, 2031, 2776, 2894, 4362, 7469 |
| BsmBI | CGTCTC | 1 cut(s) | 4094 |
| BsmFI | GGGAC | 9 cut(s) | 421, 434, 721, 835, 2031, 2776, 2894, 4362, 7469 |
| BsmI | GAATGC | 5 cut(s) | 181, 245, 1223, 1544, 1932 |
| Bso31I | GGTCTC | 3 cut(s) | 2734, 5678, 6439 |
| BsoBI | CYCGRG | 3 cut(s) | 168, 344, 6872 |
| Bsp119I | TTCGAA | 1 cut(s) | 3228 |
| Bsp1286I | GDGCHC | 8 cut(s) | 175, 211, 635, 817, 898, 1886, 4862, 4938 |
| Bsp13I | TCCGGA | 1 cut(s) | 599 |
| Bsp1407I | TGTACA | 3 cut(s) | 2157, 4722, 4978 |
| Bsp19I | CCATGG | 3 cut(s) | 3906, 6941, 7478 |
| Bsp68I | TCGCGA | 1 cut(s) | 3936 |
| BspACI | CCGC | 7 cut(s) | 1304, 2387, 5259, 5390, 5650, 5729, 7310 |
| BspCNI | CTCAG | 7 cut(s) | 661, 2202, 4104, 5956, 6473, 6623, 7668 |
| BspEI | TCCGGA | 1 cut(s) | 599 |
| BspFNI | CGCG | 1 cut(s) | 3936 |
| BspHI | TCATGA | 3 cut(s) | 3147, 3604, 5071 |
| BspMAI | CTGCAG | 1 cut(s) | 7555 |
| BspMI | ACCTGC | 4 cut(s) | 79, 3905, 4594, 6573 |
| BspOI | GCTAGC | 1 cut(s) | 7550 |
| BspPI | GGATC | 7 cut(s) | 357, 1972, 3054, 3225, 5598, 6150, 7807 |
| BspQI | GCTCTTC | 1 cut(s) | 4926 |
| BspT104I | TTCGAA | 1 cut(s) | 3228 |
| BspT107I | GGYRCC | 2 cut(s) | 4571, 4628 |
| BspTI | CTTAAG | 2 cut(s) | 7216, 7499 |
| BspTNI | GGTCTC | 3 cut(s) | 2734, 5678, 6439 |
| BsrDI | GCAATG | 7 cut(s) | 1180, 1698, 1840, 2422, 5022, 5733, 6867 |
| BsrFI | RCCGGY | 2 cut(s) | 4397, 5150 |
| BsrGI | TGTACA | 3 cut(s) | 2157, 4722, 4978 |
| BssAI | RCCGGY | 2 cut(s) | 4397, 5150 |
| BssNAI | GTATAC | 1 cut(s) | 4403 |
| BssNI | GRCGYC | 1 cut(s) | 7494 |
| BssSI | CACGAG | 1 cut(s) | 1187 |
| BssT1I | CCWWGG | 5 cut(s) | 2484, 3906, 5776, 6941, 7478 |
| Bst1107I | GTATAC | 1 cut(s) | 4403 |
| Bst2BI | CACGAG | 1 cut(s) | 1187 |
| Bst6I | CTCTTC | 6 cut(s) | 1523, 2071, 4926, 5190, 5518, 7796 |
| BstACI | GRCGYC | 1 cut(s) | 7494 |
| BstAFI | CTTAAG | 2 cut(s) | 7216, 7499 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 215 |
| BstAUI | TGTACA | 3 cut(s) | 2157, 4722, 4978 |
| BstBAI | YACGTR | 1 cut(s) | 5124 |
| BstBI | TTCGAA | 1 cut(s) | 3228 |
| BstDSI | CCRYGG | 4 cut(s) | 3309, 3906, 6941, 7478 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 822, 3769, 5780 |
| BstFNI | CGCG | 1 cut(s) | 3936 |
| BstH2I | RGCGCY | 2 cut(s) | 6105, 7123 |
| BstHHI | GCGC | 4 cut(s) | 5573, 6104, 7122, 7889 |
| BstNSI | RCATGY | 5 cut(s) | 1787, 3488, 3513, 4667, 5498 |
| BstSFI | CTRYAG | 5 cut(s) | 877, 1562, 5241, 6189, 7551 |
| BstSLI | GKGCMC | 3 cut(s) | 635, 817, 898 |
| BstSNI | TACGTA | 1 cut(s) | 5124 |
| BstUI | CGCG | 1 cut(s) | 3936 |
| BstV2I | GAAGAC | 5 cut(s) | 63, 2297, 2538, 3311, 6678 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 970, 5043 |
| BstZ17I | GTATAC | 1 cut(s) | 4403 |
| BsuI | GTATCC | 1 cut(s) | 4222 |
| BtgI | CCRYGG | 4 cut(s) | 3309, 3906, 6941, 7478 |
| BtsI | GCAGTG | 3 cut(s) | 1656, 3366, 6573 |
| BtuMI | TCGCGA | 1 cut(s) | 3936 |
| BveI | ACCTGC | 4 cut(s) | 79, 3905, 4594, 6573 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1085, 7970 |
| CciI | TCATGA | 3 cut(s) | 3147, 3604, 5071 |
| CfoI | GCGC | 4 cut(s) | 5573, 6104, 7122, 7889 |
| Cfr10I | RCCGGY | 2 cut(s) | 4397, 5150 |
| Cfr9I | CCCGGG | 1 cut(s) | 344 |
| CseI | GACGC | 6 cut(s) | 856, 1650, 1994, 3043, 7349, 7502 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 298, 333, 3006, 3041 |
| DraI | TTTAAA | 5 cut(s) | 2694, 3492, 4180, 6780, 7410 |
| DraIII | CACNNNGTG | 1 cut(s) | 5100 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 415 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3453 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 415 |
| EaeI | YGGCCR | 5 cut(s) | 2544, 2578, 3014, 5091, 7697 |
| Eam1104I | CTCTTC | 6 cut(s) | 1523, 2071, 4926, 5190, 5518, 7796 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3453 |
| EarI | CTCTTC | 6 cut(s) | 1523, 2071, 4926, 5190, 5518, 7796 |
| EciI | GGCGGA | 1 cut(s) | 7325 |
| Ecl136II | GAGCTC | 2 cut(s) | 1884, 4936 |
| Eco105I | TACGTA | 1 cut(s) | 5124 |
| Eco130I | CCWWGG | 5 cut(s) | 2484, 3906, 5776, 6941, 7478 |
| Eco147I | AGGCCT | 1 cut(s) | 2483 |
| Eco24I | GRGCYC | 2 cut(s) | 1886, 4938 |
| Eco31I | GGTCTC | 3 cut(s) | 2734, 5678, 6439 |
| Eco32I | GATATC | 2 cut(s) | 280, 3589 |
| Eco47I | GGWCC | 7 cut(s) | 417, 1016, 2045, 2488, 4144, 6876, 7599 |
| Eco53kI | GAGCTC | 2 cut(s) | 1884, 4936 |
| Eco88I | CYCGRG | 3 cut(s) | 168, 344, 6872 |
| EcoICRI | GAGCTC | 2 cut(s) | 1884, 4936 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 822, 3769, 5780 |
| EcoO109I | RGGNCCY | 2 cut(s) | 417, 4696 |
| EcoRI | GAATTC | 4 cut(s) | 1622, 2573, 3118, 6733 |
| EcoRV | GATATC | 2 cut(s) | 280, 3589 |
| EcoT14I | CCWWGG | 5 cut(s) | 2484, 3906, 5776, 6941, 7478 |
| EcoT22I | ATGCAT | 1 cut(s) | 1932 |
| EcoT38I | GRGCYC | 2 cut(s) | 1886, 4938 |
| ErhI | CCWWGG | 5 cut(s) | 2484, 3906, 5776, 6941, 7478 |
| Esp3I | CGTCTC | 1 cut(s) | 4094 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1337, 1369, 1527, 1559, 3357, 3389 |
| FaqI | GGGAC | 9 cut(s) | 421, 434, 721, 835, 2031, 2776, 2894, 4362, 7469 |
| FauNDI | CATATG | 1 cut(s) | 4185 |
| FbaI | TGATCA | 1 cut(s) | 4114 |
| FblI | GTMKAC | 2 cut(s) | 791, 4402 |
| FriOI | GRGCYC | 2 cut(s) | 1886, 4938 |
| FspI | TGCGCA | 1 cut(s) | 5572 |
| GlaI | GCGC | 4 cut(s) | 5572, 6103, 7121, 7888 |
| GsaI | CCCAGC | 2 cut(s) | 5352, 7451 |
| GsuI | CTGGAG | 6 cut(s) | 316, 4488, 4542, 5582, 6336, 7087 |
| HaeII | RGCGCY | 2 cut(s) | 6105, 7123 |
| HgaI | GACGC | 6 cut(s) | 856, 1650, 1994, 3043, 7349, 7502 |
| HhaI | GCGC | 4 cut(s) | 5573, 6104, 7122, 7889 |
| Hin1I | GRCGYC | 1 cut(s) | 7494 |
| Hin6I | GCGC | 4 cut(s) | 5571, 6102, 7120, 7887 |
| HinP1I | GCGC | 4 cut(s) | 5571, 6102, 7120, 7887 |
| HincII | GTYRAC | 3 cut(s) | 3837, 5971, 7642 |
| HindII | GTYRAC | 3 cut(s) | 3837, 5971, 7642 |
| HindIII | AAGCTT | 6 cut(s) | 1864, 2723, 4325, 5941, 6521, 6911 |
| HpaI | GTTAAC | 1 cut(s) | 3837 |
| Hpy99I | CGWCG | 6 cut(s) | 850, 1666, 2508, 3941, 4089, 7343 |
| HpyCH4IV | ACGT | 7 cut(s) | 383, 906, 1312, 2101, 2503, 4713, 5123 |
| HpySE526I | ACGT | 7 cut(s) | 383, 906, 1312, 2101, 2503, 4713, 5123 |
| Hsp92I | GRCGYC | 1 cut(s) | 7494 |
| HspAI | GCGC | 4 cut(s) | 5571, 6102, 7120, 7887 |
| Kpn2I | TCCGGA | 1 cut(s) | 599 |
| KpnI | GGTACC | 1 cut(s) | 4575 |
| KroI | GCCGGC | 1 cut(s) | 5150 |
| KroNI | GCCGGC | 1 cut(s) | 5152 |
| Ksp22I | TGATCA | 1 cut(s) | 4114 |
| KspAI | GTTAAC | 1 cut(s) | 3837 |
| LguI | GCTCTTC | 1 cut(s) | 4926 |
| LmnI | GCTCC | 8 cut(s) | 1000, 1696, 1993, 3902, 4507, 4595, 5896, 7037 |
| MaeII | ACGT | 7 cut(s) | 383, 906, 1312, 2101, 2503, 4713, 5123 |
| MfeI | CAATTG | 5 cut(s) | 1733, 3353, 3731, 3950, 4242 |
| MhlI | GDGCHC | 8 cut(s) | 175, 211, 635, 817, 898, 1886, 4862, 4938 |
| MlsI | TGGCCA | 2 cut(s) | 3016, 5093 |
| MluNI | TGGCCA | 2 cut(s) | 3016, 5093 |
| MmeI | TCCRAC | 8 cut(s) | 994, 1070, 2717, 3195, 3265, 4287, 5676, 7848 |
| Mox20I | TGGCCA | 2 cut(s) | 3016, 5093 |
| Mph1103I | ATGCAT | 1 cut(s) | 1932 |
| MroI | TCCGGA | 1 cut(s) | 599 |
| MroNI | GCCGGC | 1 cut(s) | 5150 |
| MroXI | GAANNNNTTC | 6 cut(s) | 981, 2573, 2666, 2779, 3523, 6950 |
| MscI | TGGCCA | 2 cut(s) | 3016, 5093 |
| MslI | CAYNNNNRTG | 4 cut(s) | 4682, 5082, 5583, 6600 |
| Msp20I | TGGCCA | 2 cut(s) | 3016, 5093 |
| MspA1I | CMGCKG | 3 cut(s) | 5261, 6464, 7474 |
| MspCI | CTTAAG | 2 cut(s) | 7216, 7499 |
| MssI | GTTTAAAC | 1 cut(s) | 4180 |
| MunI | CAATTG | 5 cut(s) | 1733, 3353, 3731, 3950, 4242 |
| Mva1269I | GAATGC | 5 cut(s) | 181, 245, 1223, 1544, 1932 |
| MvnI | CGCG | 1 cut(s) | 3936 |
| NaeI | GCCGGC | 1 cut(s) | 5152 |
| NciI | CCSGG | 8 cut(s) | 345, 346, 692, 745, 2548, 3301, 3965, 7891 |
| NcoI | CCATGG | 3 cut(s) | 3906, 6941, 7478 |
| NdeI | CATATG | 1 cut(s) | 4185 |
| NgoMIV | GCCGGC | 1 cut(s) | 5150 |
| NheI | GCTAGC | 1 cut(s) | 7546 |
| NmuCI | GTSAC | 7 cut(s) | 439, 1081, 1430, 3055, 3232, 3445, 5847 |
| NruI | TCGCGA | 1 cut(s) | 3936 |
| NsbI | TGCGCA | 1 cut(s) | 5572 |
| NsiI | ATGCAT | 1 cut(s) | 1932 |
| NspI | RCATGY | 5 cut(s) | 1787, 3488, 3513, 4667, 5498 |
| NspV | TTCGAA | 1 cut(s) | 3228 |
| OliI | CACNNNNGTG | 1 cut(s) | 4682 |
| PaeI | GCATGC | 3 cut(s) | 1787, 4667, 5498 |
| PaeR7I | CTCGAG | 1 cut(s) | 168 |
| PagI | TCATGA | 3 cut(s) | 3147, 3604, 5071 |
| PaqCI | CACCTGC | 3 cut(s) | 79, 3905, 6573 |
| PceI | AGGCCT | 1 cut(s) | 2483 |
| PciI | ACATGT | 1 cut(s) | 3484 |
| PciSI | GCTCTTC | 1 cut(s) | 4926 |
| PctI | GAATGC | 5 cut(s) | 181, 245, 1223, 1544, 1932 |
| PdiI | GCCGGC | 1 cut(s) | 5152 |
| PdmI | GAANNNNTTC | 6 cut(s) | 981, 2573, 2666, 2779, 3523, 6950 |
| Pfl23II | CGTACG | 1 cut(s) | 4895 |
| PflFI | GACNNNGTC | 1 cut(s) | 3032 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 1085, 2736, 3012, 3247 |
| PfoI | TCCNGGA | 2 cut(s) | 690, 4707 |
| PmeI | GTTTAAAC | 1 cut(s) | 4180 |
| Ppu21I | YACGTR | 1 cut(s) | 5124 |
| PpuMI | RGGWCCY | 1 cut(s) | 417 |
| PscI | ACATGT | 1 cut(s) | 3484 |
| PsiI | TTATAA | 4 cut(s) | 81, 2060, 3770, 7056 |
| Psp124BI | GAGCTC | 2 cut(s) | 1886, 4938 |
| Psp1406I | AACGTT | 2 cut(s) | 383, 906 |
| Psp5II | RGGWCCY | 1 cut(s) | 417 |
| PspFI | CCCAGC | 2 cut(s) | 5348, 7447 |
| PspLI | CGTACG | 1 cut(s) | 4895 |
| PspPPI | RGGWCCY | 1 cut(s) | 417 |
| PspXI | VCTCGAGB | 1 cut(s) | 168 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 2217, 2249, 4779, 4811 |
| PstI | CTGCAG | 1 cut(s) | 7555 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1085, 7970 |
| PsyI | GACNNNGTC | 1 cut(s) | 3032 |
| PvuII | CAGCTG | 2 cut(s) | 6464, 7474 |
| RruI | TCGCGA | 1 cut(s) | 3936 |
| RseI | CAYNNNNRTG | 4 cut(s) | 4682, 5082, 5583, 6600 |
| SacI | GAGCTC | 2 cut(s) | 1886, 4938 |
| SapI | GCTCTTC | 1 cut(s) | 4926 |
| ScaI | AGTACT | 1 cut(s) | 6046 |
| SduI | GDGCHC | 8 cut(s) | 175, 211, 635, 817, 898, 1886, 4862, 4938 |
| SfcI | CTRYAG | 5 cut(s) | 877, 1562, 5241, 6189, 7551 |
| Sfr274I | CTCGAG | 1 cut(s) | 168 |
| SfuI | TTCGAA | 1 cut(s) | 3228 |
| SinI | GGWCC | 7 cut(s) | 417, 1016, 2045, 2488, 4144, 6876, 7599 |
| SlaI | CTCGAG | 1 cut(s) | 168 |
| SmaI | CCCGGG | 1 cut(s) | 346 |
| SmiI | ATTTAAAT | 1 cut(s) | 7410 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 4682, 5082, 5583, 6600 |
| SmlI | CTYRAG | 8 cut(s) | 168, 1233, 2220, 2791, 2984, 4700, 7216, 7499 |
| SmoI | CTYRAG | 8 cut(s) | 168, 1233, 2220, 2791, 2984, 4700, 7216, 7499 |
| SnaBI | TACGTA | 1 cut(s) | 5124 |
| SphI | GCATGC | 3 cut(s) | 1787, 4667, 5498 |
| SseBI | AGGCCT | 1 cut(s) | 2483 |
| SsiI | CCGC | 7 cut(s) | 1304, 2387, 5259, 5390, 5650, 5729, 7310 |
| SspI | AATATT | 6 cut(s) | 2868, 4201, 4551, 5232, 6078, 6976 |
| SstI | GAGCTC | 2 cut(s) | 1886, 4938 |
| StuI | AGGCCT | 1 cut(s) | 2483 |
| StyI | CCWWGG | 5 cut(s) | 2484, 3906, 5776, 6941, 7478 |
| SwaI | ATTTAAAT | 1 cut(s) | 7410 |
| TaiI | ACGT | 7 cut(s) | 386, 909, 1315, 2104, 2506, 4716, 5126 |
| TaqII | GACCGA | 1 cut(s) | 7352 |
| TatI | WGTACW | 6 cut(s) | 482, 2157, 4722, 4978, 6044, 6810 |
| TseFI | GTSAC | 7 cut(s) | 439, 1081, 1430, 3055, 3232, 3445, 5847 |
| Tsp45I | GTSAC | 7 cut(s) | 439, 1081, 1430, 3055, 3232, 3445, 5847 |
| TspGWI | ACGGA | 7 cut(s) | 883, 1570, 2678, 3213, 4376, 5197, 6312 |
| TspMI | CCCGGG | 1 cut(s) | 344 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3032 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 1085, 2736, 3012, 3247 |
| Vha464I | CTTAAG | 2 cut(s) | 7216, 7499 |
| VneI | GTGCAC | 2 cut(s) | 631, 813 |
| VpaK11BI | GGWCC | 7 cut(s) | 417, 1016, 2045, 2488, 4144, 6876, 7599 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 822, 3769, 5780 |
| XbaI | TCTAGA | 4 cut(s) | 2627, 2893, 2923, 7426 |
| XceI | RCATGY | 5 cut(s) | 1787, 3488, 3513, 4667, 5498 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1086, 7831 |
| XhoI | CTCGAG | 1 cut(s) | 168 |
| XmaI | CCCGGG | 1 cut(s) | 344 |
| XmiI | GTMKAC | 2 cut(s) | 791, 4402 |
| XmnI | GAANNNNTTC | 6 cut(s) | 981, 2573, 2666, 2779, 3523, 6950 |
| ZrmI | AGTACT | 1 cut(s) | 6046 |
| Zsp2I | ATGCAT | 1 cut(s) | 1932 |