RLG00000005703

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000223
Physical Location & Seq
Reverse (-)
967745 .. 985013
17269 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005703

Sequence Viewer

Length: 10746 bp
ATGATGGAAGGTTCAGAGAGCTTCACTTACACTGTGCTTTCTTGGTCCCTTGAAGACATATGTAATGAAAACCTTTACAAGCACCAGATTCCCGAGTCAGTTCAACAATTTGGGGCATGTTCATATCCATTATTGGATGAAACTCGAGCTCAGTTGCAATCCAGTATGGAATCCATGCACAGCGCACCATTTTGTCAAGTAAATGCCATCCATGAGTCAAAGCCCTATGAAGGAGAAACAAAGCTATATGATATGGAGATTGATGGCTGGGGAAACAGTGATTCTGGCATGGAGTTGCACAAACCCATTCAGGGAGATGTCTTTGTTTTAGCAGATGCTAAACTCGAAACTATATCTGATTTACGAAAGTTGGGGAGGTGGTGGTCACTTGTAATAGTCACTGAGGTCTCCACAGATAAGAAAGAGGATGATAGAACCTCTGTTTCCCTTAAAGTCAGAGCACCGAAAGAATTTGAAGTCAGCAATGGCAATGGAACATCACTGTTTTTGGTCTTCTTAGCAAACATAACTCCTAACTTAAGGATATGGAACGCAATGCACGTGTGCATCAGTTCCAGATGGAAGGTGCTGTTTGGTGATAACTTTATGAAATCATTCAAAAACTTGAAGTCATTCCAAAAGAAGATGTCAGTGCTGAATCTTCTTCTCAAGCTTTCGAGTGGCTGGAGACCCAAGAAACGAAATGTAGACAGAATATGTAAAAGCTCTTCGATGACACTGAAGCAATTTAAGGTTGATGATCTATATATTGTTTTGACAATCGACGTTGAAAAGGATTTGAAATACATGCAAGTGTTGAGGATGTGGGACTTATTGCCTGGTCTGTTGGATATCCAAAAATTGGCAGATCGATTGGACTGCATATTTAGTAGATACACGAATCTTTTTGTCAATCTCTGTAGAGAGAAATGTCTTGAGGGTCATTTGGAAGTTCCAGCAAGCTGGCCCCTCTCTTTGGATGTTGTCCGCTATAAAGATCTACGCAGCACCGAAAGCATGAGTAATTCTTTTGGTGACTCTTCTGTGAATGGAAGTTGTCTTGAGAATTCAAAGGTCAATGAGAGCTTGTTGCTGATGAAGTTTTACTCCTTATCATCTGGGGTAGTGAACTTCTTGTTATCTGACCGAGAGGACAGCAAAGTGGATCTCCCTTTTGAAGTTACTGACCAAGAAAGGGAGGCTGTTCTTTATGATAGAAGTACATTTATACTAGGACGGTCAGGCACTGGAAAGACAACAGTTTTGACTACAAAGTTATATCAGAAAGAACAGCAGCACCATATGGTTGATGAAGGTTTCTATGATGTTGAAAGCAATGCAGTCGGGCATGCCGGTCTGCATAATAAAGCTGGACAGAGTTCTTCTTCTGCATTAAATAAAGGGACTGTGTTGCGCCAACTTTTTGTGACCGTGAGTCCTAAACTCTGTTTTGCCGTCAAACAACATTTTTTACGCTTGAAAAGTTTTGCTTCCGGCAGAAGCACTTCGGTTGATATGGATGATTTTGATGGTGAGGAAGTTCAATTTAGGGGTATCCCAGATTCTTTTTGTGATATTCCTCCAAAATGTTATCCTCTTTTCATAACATTTCATAAGTTCTTGATGATGCTTGATGGAAGTCTAAGTAATTCATACTTTGAAAGATTCCCAGACATCACAAAACTACCTCAAGGTCGACCGCGAATATCAAGAGCTAATGTGCTGCAGACCTTCCTCACCACCAAGGAGGTCACATATGCAAGGTTTAGCTCATCATATTGGCCTCATTTTGATGTTCAGTTGACAAAGAAGCTTGATGCTTCACGAGTCTTTACTGAGATTATTTCTCATATCAAAGGTGGTCTTAGAGCCTTGGAAGCAGGTGATGGAAAACTCAGTCAGTTGGATTATGTGCAAATGTCAGAGGGCCGGGCTTCCAGTTTAAGCCAGCAAAAGAGAGAGATAATATATGAGATATTTCAGGTATATGAGAAAATGAAAATGAGAAATGGTGAGTTTGATATTGCTGATTTTGTAAATGATATTCACCGTCGGCTCAAATGTGAAAAATACAAGGGTGATGAAATTGATTTTGTGTACATTGATGAGGTCCAGGATCTTGCCATGAGCCAAATTGCATTGTTTAAACATATCTGCAGCAATGTTGAAGGGGGTTTCGTTTTTTCTGGAGATACAGCCCAGACTATAGCAAGGGGTATTGATTTTAGATTCCAAGATATACGACATCTCTTTTACAAGAAGTTTGTATTGGAATCAAGAAACAAAAAACATGACAATAGGAAAGAAAAAGGACAGATCTCAAACATCTTTCAGTTGACACAGAACTTCCGAAGCCATGATGGGATACTGAAGTTGTTGCAGAGCATTGTTGAACTGATTTATCATTTTTTCCCCCTCTGTATTGATGTCTTAGAACCAGAAACGAGTATGATATATGGGGAAGCTCCGATTCTACTCTATTCTGGAAATGATGAAAAACTATTCAAAAAAATTCTAGGAAGTAGTGGGATTATTGCCGGAAATATGGGTGGCTTTGGTGCCGATCAAGTTATTTTGGTCCGTGATGATTGTTCTCGAGAAGAAATCTCTAACTCCATTGGGAAGCAAGCTCTAGTTCTTACTATAATGGAGTGCAAGGGCCTAGAATTCGAGCTATATCATGAGCATAACTACAAAATGGCCAGAATGTGCTTTCATAAAGCTGGTGATACATTTTGGGAAAGACGGTCTGAAGCTGCTGAACTTAAAGTCAAGGCAGACCATATGCGCACTTCTAGTCCTGGAGCGGCAAATGCACTCCTTAGGAAAGCGGCTTCAATTTTTGAAGCTATAGGCCTGTTTGTACCTTCTGCCAGATGCTTTTATGATTTGGGCGAGTATGAACGAGCAGGTACAATTTATTTGTATAAATGTGGCGAACTGGAACTGGAAAATGCTGGGGAGTGCTTTTATCTTGCTGAAAATTATGTGCTTGCTGCAGATGTGTACGCTAGAGGGAACTTTTTCTTTCAGAGTATTTCTTCTTGTTTACGAGGAAATATATTTCACAGAGGTTTGGAATACATAAAATATTGGAGACAACATGCAAGAGACGAGTATGATCTGGCCAGACAAGGAGATGAGACTCATGAAATGGAATTGGAATTTCTTGAGCTTTGTGCATTTCACTATTATGAGGGAAAAGATGACAGATCAAGGATGAAAGTTCTTAGAGATGGGATGCTTTCTACTCGAAAGTTTTTGAATGCTCAGATTTCATCACGCACTTCAAAATATTTGTGGGAAGAAAAACTGCCTGGTGATCTTAAAAGGCCTTCAAACAAAAAATATGAGAAGCAGGTTTCTATTGATTCACTGGTCTACTTCTGGAATTCTTGGAAGGATACAGTTGTACACCTGATTGAATATCTTGGATCGATAGATGTTACTGATTACATAAGTCATGGTGACTTCTTTCTGAATTATTTAGGGGTGTGGAGGCATTTTCATGATGGTCTAAATCCGCTCTATCTTTCACTCATTTATGATATTGACTGGGTGAGAAGTATTGACAAGAGATCTTTCCCAAGAAATGAGAAGTCGGTCCCCATTGATGTTCACCGGCTTGTCTTGGATGCTCAGAGTTATTGGAGTTCAGAGATGCTTTCTCTTGGCATTAAGGTTTTGGAGAAGCTTGAAGTGCTTTACAACTTCGCAATCAATAATTCTGATACAGTGTTCTGCCAGAGCCGGTCTCTTATCGATATATACGAGGTTGCAATATATCTTCTGGAATCCAAATTTCTGAAGATGACTCATTATCATGCTGAGACACTCCACAGATTTGTTACATTGTCAACTGAGAATTTTGTCTCTTACATATTTCCTTTAGATTGGATGAGGTCATCAAGAGAGGATATGATTTCTCTTAGGCAAATTGATTCTTGTAAGTGTTTACTGAATCAAGTCATAGTTGAGTACATCAGCTTGACAAATAGGCTTTCATCTGGGCAAATGGGATGCATTGCGATGATCATTCTCGGGTCTGGTAAGCTGGATAATGAACTTTATGAGAAGCTTATAAAAAATCTAGACTGCAACTCTCCATGGAAAAAGTTCATTGAGGATCTATGTGACAGTATTCAGTCAGAGCTGCCAGAAGGTTATAATAGTGAGCGACCTGAAAATGCCACAGTTCTAAAATATTCGGTGGCACCTGAGAGAGGTCCTTTACTTGGAAATATCAGTCAAGAACCGAGAGAGGTGTCTTTTTTGTGGAAGTTCCATGGTGCTTTGTTCGAAACTTATAGTCAGAATTGGAGGTTACATTGCTACAATATGACACCTGATTGCTTTTTATATCTTGTAGATTGCCTTCTGATTCGGATCTGTTGCTTTCAAGGTTATGCAATCACTACAAGATCTTGTTTTATTGAGCGGCTGATATATAAGGAGGAACATAATCAAGTGATAGTGGATGATGTTCGAATATCTTTTGAATGCATCCTTCAGTTTCTGACTGATGTTGTTCGGGGATTTCTTTTTAATAAGACGGGTATGATTAAATGGATAAAAAAGTGTACCAATGATAGTTGGAAGATGTATTACTCGCTACTGATGCAGAGATTGGTTTTTGTGTTATGTCTGCTTTATTTGAATTTTGGGATGGGCTTTGATATTCTCTTGGATTTGCTGAGGAGGAAGTACATCACTGACCAGCTACCAAAGGAGTTTTGCTATGTCCTTAGGGGAATTGCATCTTTACGTGATTCTGTTAGTAGACATGTTGATGTGGTAGCTCGAGCTTTTAAGAAGAGCGGTAATCCTTTAGTGGTTGCAAGTTTTGGGATTGATTGTTCAAGGTTCTTCTGTTCTGATGCCATTATCATCAACATGAAGGCTAACATATGCATGGCTGAAATAGTAAGATCTCTGTTTCCAAAACACTCTATGATTCGTTCTTCAGAAGGGCAAACATACACCACTGAAAACCTTCGGCATTGGAACAGAAATAACTTCCCCGTGGATTTTGATCCCTTGTGGGAAATATTTAAAGGTTTTAAACCAGCAAAGGAAAGAGATCAGTGCAATATATTTTCACATGCCTCAACAATCAAGTTGGATGTGGAGAAGATTATTCGGCTTTTGGCTGCTGCATGGTCTGGCCTTGATGACAAAGAAGAACGAAAGTTATCTAGAGAAGTGCTGAGCATGCTGGATGAATTGGTGCAACTCTATGCCGCATTAGATGGGAGCGAACGTGAAGTTGGAAACAATATGGCTACAGTTGCAGAACTTTCCAGGAGTTCCAATTCAAAGCCTTCACAAGTTGATGCTGCCACTGCAGCAGAAACTCAAACTGACAGCTATGGAACTGGAAACACGAAGAAGGTTGGAAGCCCTGAATCATTTCAGTCCGACCCTCATCAATATTTTGCTTCTTACAAATATCCTTTATTGGAGGAAACTCGAGCTCAAATGCAATGCAGGATGGAAACCCTGTATCGAGCACCATTTGGTAAAGTAATTTCTATACAAGAATCCAATCCGCATGGAATAAAGCAATACAATGTTAAAGTTGATTCTTGGAGAAACAGTGTCATTAAGGAATGCAAAACTAGGCCTGGGGATCTTTTTATTTTAGCAGATGATAAAGCTGAAACTGTTTCTGATTTACAAAAGGAAGGGAGATCATGGGGGTTTCTAATAGCCATTGAAGTATTCCCAAAAAGTAAGAGCGAGGACGATGGTACTTCTCTTCATTTCAAAATCAGAGCATCGAAAAAGTTTCACGTCAACAATGGCATTCCGACATCATGGTTTATCATTTTCTTAGAGAACATAGCCCCAAACATAAGAGTATATAAAGCCATGCACCACATGTGCACGGGAGCTAGATGGAGGGTGATTTTCAGTGATAACTTTCTCAAGTCATTCAGGCAACTGACCTCGTTTCGTACAAAGATGTCATTACTCAGTTTGCTGCTTAAGCTTTCCGGTGGCTGGAGTGACTTGGAAGTTCCAATGAGCTGGCCAGCCTCCTTGGATGTCATCCGATATAAGGATCTTAGCATCACTAGTGATTCAGTGGATGATAGTTTGTTGCTGATGAAATTCTACTCCTTATCATCAGGGGTGGTGAATCACTTGCTCTCTGACCGTGAGGGTAGAGAGTTGGTTCTCCCATTTGAAGTTACTGATGAAGAAGTGGAGGCCATACTTTACAATAGAAGTGCCTTCATAGTTGGGCAATCAGGCACTGGGAAGACCACTGTTTTAACAATGAAGTTATATCAGAAGGAACAGTATTACAATATGGCAAAGGAAGGATTGTGTGCTGTCGAGCAGAGTTCTGGAGGTTCTAATGCAACTGTTTTACGCCAGATATTTGTAACAGTTAGTCCAAAACTCTGTTTTGCCATCAAGCAACATGTATCAAACTTGAGAAGTTTTGCTTCTGGTGTAAGCTGCCATTCAGCTGAATTCGGCTCGGTTGGTCTGGATGATTGTAATGATGCAGAAGCAGAATTTAGGGATCTCCCAAATTCATTTCTTGATATTCCTTCCGAGCATTATCCTCTTTTTATAACAGTCCATAAATTTTTAATGATGCTAGATGGAAGTTTGAGTAATTCATACTTTGAAAGATTCCTTGACAACCTAAAACTACCTCGAAGTCCACTACAAAGTTCAAGATCACTGAAAAGCTTATTGAGGACAAAGGAGGTCAATTACGAAAGGTTTTGTTCATCATATTGGCCTCATTTCAATATGAAGTTAACGAAGCGGCTTGATGCCTTGAGAGTCTTTACGGAGATTATTTCTCATATCAAAGGTGGTCTTAGAGCTTTGGAAGCAGGTAATGGAAAACTCAGTCAGTCGGATTATGTGAAAATGTCCGAGTGCCGGGCTTCCAATTTATGCCAGAAAGAGAGAGAGATAATATATGATATTTTTCAGGCATATGAGAAAATGAAGACAAGAAATGGTGAATACGATATTGCTGATTTTGTAATTGATATTCACCGTCGGCTCCAACGTGAGACATATAAGGGTGATGAAATTAATTTTGTGTACATCGATGAGGTACAGGATCTAACGATGAGTCAAATCATGCTGTTCAAGCATATATGCAGTAATGTTGAGGAGGGTTTTGTTTTTTCGGGTGATACGGCCCAAACCATTTCAAAGGGTATTGATTTTAGATTCCAAGATATACGGCATCTGTTCTACAAGAAGTTTGTCTTGGATTCAAGAAGCAATGAGCATAACCAAAGGAATGACAAAGCAGAAATCTCAAGATTATTTCATTTGTCTCAAAACTTCCGCACACATGGTGGTGTACTGAGGTTATCACAGAGCATAATTGATCTACTTTGTCATTTTTTCCCCGAATCTATTGATAGTCTGAGTCCTGAAACAAGTCCAATACATGGGGAAGCTCCAGTTTTGCTTCAATCTAGAGAAAATGAAGATGTAAGCATGAAGTTATTTGGGAGTAGTGCTACTAATTTTGTTGGGTTTGGAGCTGAGCAGGTCATCTTGGTGCGTGATGCTACCGTTCAAAAAGAGATTTCTAACTCTTTTGGGAAGCAAGCTCTTGTTTGTGGAGATGTACTGTTGTACAAGTATTTTGGGTCATCACCCTTAATAAATGAACGGAGGCTGATATATAATTACATGAAGGAACATGATTTGCTTAGTCCCACTTTACCTAAGTCGATTCCAACATTTGACTGGGCAAAACACAATTTCTTATGCTCTGAACTGAAGCAATTATATGTTGCTGTTTCACGTACAAGAAATAGATTGTGGATTTATGAGGACATGGAAGGTCTCTGGAATCCCATGTTTGACTATTGGATAAAGAAATGTCTTGTACAAGTGAGGCAACTTGATGATTCCCTTGTAGAAAAAATGAAAGTTTCAAGCAGTGCAGAGGAATGGAAATCACGTGGCATGAAGCTGTATCATGAGTGTAATTATGAAATGGCCAATATTTGCTTCCAAAATGCACTTGATACTTACTGGGAAAGAAGGTCAAAAGCCGGCAGCCTCAAAGTTATGGCTTATTGTATGCAAACATCAAATCCTGAAAAGGCTAAATCCATTCTTAGGGAAGCTGCCGAAATTTTTGAAGATATAGGGATGGCAATTTCTGCTGCCCAGTGTTTTTTTGATTCAGGGGATTATGACATAGCAGGTAGGATTTATTACCACAAATGTGGTAAACAAGCACGTGAAAGAGCTGCGGAATGCTTCTTTCTAGCTGAGCGCTATGAATCTGCTGCAGAAATATTTCAATCCATAGGCAAGGCAGAGTCTGCTGCAAGATGCTATTACGAGTTGGGGCAGTATGAAAGGGCAGGGACTATCTATTTGGAAGACTGTGGTGAACCTGGACTGGAAAGAGCTGGGGAGTGTTTCTATCTAGCAGGATGCTATGAGCGTGCAGCTGACGCCTATGCTAGGGGAAATTTTTTATCCGACTGTCTTACTGTGTGTTTAAAGGGAAAGCTGTTTGACATAGGTTTGAAATATATTAAAAGTTGGAAGCAACACACAAGAAAAGAGCATGATCTGGCTATAAGAGGAGAACTGGAGTTTCTTGAGAGCTGTGCATTTCACTATTATGAGGTTGAAGATACAAGATCCAAGATGAAATCTGTTAGAAATGAAATGTTGTCCAGTCGAAAGGTTTTAAATGCTCATCTCTCTTCAAGTCCAAAAATATATTTGTGGGATGACAAACTTATTCGTGATTTTCGTGATCTGAAAAATTATTTGGACGTCAAACAATCTGAAAAGCAGTTTTCTGTAGATTCACTGGTGTACTTCTGGAATGTTTGGAAGGATATGGTAGTTTACTTGATTGAATATTTTGAATCTGTTGAAACCCAAGCTGTTAATAGAAAGAGAACTTTCGGAGACTTCTTTCTGAATTACCTGGGAGTGTGGAGGCAGTTTCATGATGATCTGCTTTTTGTCTACACTGTACTTATCTCTGATGCAAATTGGGAGGAATGGACAAAAGGTCTTTTCAAATTAACGGGGACTGCTCATAGCTATTGGACTTCAGAACTTCTTTCATTTGGCATTAGGATTTTGAATAAGCTTGAAGCGCTTTACAGGGTCAAATCTGATTCAGTTCTCTGCCAAAGCTGGTGTCTTACGAAGATTTATGTTGTTGCGAAGCGTGTCTTGGAATCCAAATATCTGAAGCTAAGGAACGAAGATTCCGATACACTACAGAATTTTGTTGAACTGTCAACTGAAGATATTGTTGCTTGTATATTTCCTCCTGATTGGAGGAAATCTAGCATGATTACTCTTAGACAAAAGGGTACTTCTAAAAGTTTGCTCAAACAAGTTGTAGTTGATTTACTTACCAGCTCAAAGAAAAATATTTCTTATGGCCAAGTTGGAAGGCTGGCAATGATTATTCTTGGGTCTGGTAATTTTGATGATGATGAACTATACAAGAAACTTATGAAAAATCTGAAATGTAGTTCACCGTGGAAGGTGTTCATTCATAATCTGTGTGGGAGTATCATTGCAAAACAGAAAGGGTCTGTACTTATCAATACCAGTCAAGAAAAGAAAGATGTGTCTCTTGTCCAGGACTTTCATCAGGCTTTGGCAGAAACTTATTATGCAAACTGGAGGGAGAAGGAAGATACCAAACTCACTTCCAGTATACTGGCTGATGTGCTAATATCTCTTGAACCCATCCTTATGTTTCTGATCGCTGTGGTTCGGGAGGTTCTTTATGATAAGAGGACCATGGTTGAATGGATTCAAAGGTCTATCTCACAGTGGGAGGAGTGTCATTCACTGCTGATCCTGAGATCGGTTGTTATCTTGTGTTTGCTTTATTTGAATTTTGGAATGGGGTATGATATACTCCTAGATCTACTGTATAGGGAAGATATCACTGAACAACTCCCAAAGGATTTTTGCGATGCCTTGAGGAGAATGCATAAATGTTCTCTTAATGTAAATGTGAATGCTCTCGCTAAAGCTTTTAAGAAGATTGGTCATGATTTGGTGGTTGCAAGTTTTGGGGTTGATTGTTCAAGGTTCTTTTGTCCAGATTCAATTTATGTAGAGATGAAGGCCAACCTATGCAGTAATGAGATACTTAGAATATTGTTTCAAAGACCACATATTCTTGTTCAATATTCCCAAGGTCAAACAATTATCGGGGAAGCTTGCAGTCCTGTTCCTTCTGCTTATGATTCGGAGGAGACCAAGGTTGAGAGTCCTAAGCTTCTTCTACCCAACTCTGGTGTGGTGGAAGATGAGGTCCAACACACTGGAAACAGTAACAAAAGTGACCTTCCAATGGGTTTTGACGCTTTGTGGGACAAATTTGAAAGTTTTAAGTTGGTGGAGAAGGATGGTCAGAGGAGTCTACTTTCAGATGCCTCAGCATTTAAGTTGTTTGTGGGGAAAATTATTTTCCTTTTGACTGCTGTCTGGTTGGCAAGCTTTCCAAATGCTGTTGACAGAGAAGAACAAATAGTATCTCGAGAAGTGCTGAGCATGCTTGATGAGTTGATGCAACTTTCTGCGGCCTTACATGGCAGTGAAAAGGAACTTGGGAACAAAATGTCTACCGTTGCAAAACTTTCTGCGAAGTTGCAAGTGAGGAGGCAAAGAATGGAGCCCATGTTTTTTTGGCCAGAGAAAAGGGAGGCCTATCTACAAGATGCGGCTGCTACTGGAACACAAACCGGCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006353 GO:0006355 GO:0006357 GO:0006364 GO:0006366 GO:0006369 GO:0006378 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008033 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016180 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019904 GO:0022613 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032574 GO:0032575 GO:0032774 GO:0032991 GO:0033554 GO:0033677 GO:0033678 GO:0033680 GO:0033682 GO:0034470 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035649 GO:0042254 GO:0042592 GO:0042623 GO:0043139 GO:0043141 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043618 GO:0043620 GO:0043628 GO:0043631 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045005 GO:0045454 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:1990248 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

3582

Amino Acids

411.75

Weight (kDa)

6.4

Isoelectric Point (pI)

43.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF6469 PF20073 63 - 188 4.2e-38 Domain of unknown function (DUF6469)
UvrD-helicase PF00580 647 - 736 6.6e-06 UvrD/REP helicase N-terminal domain
DUF6469 PF20073 1838 - 1960 2.9e-33 Domain of unknown function (DUF6469)
UvrD-helicase PF00580 2307 - 2395 7.6e-07 UvrD/REP helicase N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000223)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26390 FvH4_1g26391 FvH4_2g00700 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_2g00900 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36180 FvH4_4g36210 FvH4_4g36221 FvH4_4g36250 FvH4_4g36250 FvH4_4g36250 FvH4_4g36280 FvH4_4g36280 FvH4_5g34990
malus_domestica MD09G1274800.v1.1 MD09G1274900.v1.1 MD09G1275500.v1.1 MD13G1010700.v1.1 MD16G1270700.v1.1
prunus_persica Prupe.1G087400_v2.0.a1 Prupe.1G134300_v2.0.a1 Prupe.1G215600_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G215900_v2.0.a1 Prupe.1G342300_v2.0.a1 Prupe.8G106200_v2.0.a1 Prupe.8G106200_v2.0.a1
pyrus_communis pycom09g18530 pycom09g18550 pycom09g18590 pycom13g00880 pycom16g24010
rosa_chinensis RchiOBHm_Chr2g0116911 RchiOBHm_Chr2g0116921 RchiOBHm_Chr3g0486161 RchiOBHm_Chr3g0486171 RchiOBHm_Chr4g0445931 RchiOBHm_Chr4g0445961 RchiOBHm_Chr4g0445971 RchiOBHm_Chr4g0445991 RchiOBHm_Chr4g0446001 RchiOBHm_Chr4g0446011 RchiOBHm_Chr4g0446031
rosa_laevigata RLG00000002343 RLG00000005696 RLG00000005698 RLG00000005699 RLG00000005701 RLG00000005703 RLG00000018313 RLG00000023096 RLG00000023099
rosa_multiflora Rmu_co8408865.1_g000001 Rmu_co8420123.1_g000001 Rmu_sc0000372.1_g000002 Rmu_sc0003001.1_g000002 Rmu_sc0003001.1_g000003 Rmu_sc0003001.1_g000006 Rmu_sc0003001.1_g000007 Rmu_sc0006315.1_g000012 Rmu_sc0007511.1_g000001 Rmu_sc0008543.1_g000001 Rmu_sc0009534.1_g000001 Rmu_sc0024967.1_g000001 Rmu_sc0036469.1_g000001 Rmu_ssc0000238.1_g000032
rosa_roxburghii Rroxscaffold_2G00126890 Rroxscaffold_5G00386350 Rroxscaffold_5G00386360 Rroxscaffold_5G00386370 Rroxscaffold_5G00386380 Rroxscaffold_5G00386400 Rroxscaffold_5G00386410 Rroxscaffold_5G00386430 Rroxscaffold_5G00386440 Rroxscaffold_6G00396020
rosa_rugosa Rorug03G0223800 Rorug03G0223800 Rorug03G0223800 Rorug04G0366100 Rorug04G0366200 Rorug04G0366300 Rorug04G0366400 Rorug04G0366500 Rorug04G0366600 Rorug04G0366600 Rorug04G0366700 Rorug04G0366700
rosa_samantha Rh1AG167300 Rh2AG265000 Rh2BG276500 Rh2DG272400 Rh2DG291200 Rh2DG291300 Rh2DG291400 Rh3AG273600 Rh3AG273700 Rh3BG308800 Rh3BG309000 Rh3CG307200 Rh3DG303500 Rh4AG427400 Rh4AG427700 Rh4AG427800 Rh4AG427900 Rh4AG428000 Rh4AG428300 Rh4AG428400 Rh4AG428500 Rh4AG428600 Rh4AG428700 Rh4BG426000 Rh4BG437600 Rh4BG437800 Rh4BG437900 Rh4BG438100 Rh4CG454300 Rh4CG454500 Rh4CG454600 Rh4CG454700 Rh4CG454800 Rh4CG454900 Rh4CG455200 Rh4CG455500 Rh4DG435700 Rh4DG435800 Rh4DG435900 Rh4DG436000 Rh4DG436100 Rh4DG436300 Rh4DG436600
rosa_wichuraiana Rw2G020880 Rw3G024250 Rw4G036590 Rw4G036600 Rw4G036620 Rw4G036630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 4082, 4167, 6587
AarI CACCTGC 1 cut(s) 1871
AatII GACGTC 1 cut(s) 8793
Acc16I TGCGCA 1 cut(s) 2789
Acc36I ACCTGC 6 cut(s) 1871, 2900, 3349, 6848, 7525, 8192
AccB1I GGYRCC 2 cut(s) 2558, 4213
AccB7I CCANNNNNTGG 2 cut(s) 862, 7433
AccBSI CCGCTC 4 cut(s) 2807, 3526, 4438, 4818
AccI GTMKAC 8 cut(s) 708, 1696, 3381, 4780, 8988, 9697, 10414, 10616
AccII CGCG 1 cut(s) 1702
AcoI YGGCCR 6 cut(s) 2700, 3126, 6032, 7992, 9415, 10682
AcvI CACGTG 3 cut(s) 562, 7955, 8240
AcyI GRCGYC 2 cut(s) 8460, 8790
AdeI CACNNNGTG 1 cut(s) 7337
AfeI AGCGCT 2 cut(s) 8276, 9123
AflII CTTAAG 2 cut(s) 538, 5987
AflIII ACRYGT 4 cut(s) 561, 4783, 5880, 6430
AhdI GACNNNNNGTC 2 cut(s) 1434, 9033
AhlI ACTAGT 1 cut(s) 6077
AjiI CACGTC 1 cut(s) 5794
AjnI CCWGG 9 cut(s) 838, 2112, 2800, 3316, 5300, 5623, 8398, 8946, 9618
AleI CACNNNNGTG 1 cut(s) 8223
AloI GAACNNNNNNTCC 4 cut(s) 4840, 4872, 9221, 9253
Alw21I GWGCWC 5 cut(s) 151, 463, 5476, 5512, 5888
Alw44I GTGCAC 1 cut(s) 5884
AlwNI CAGNNNCTG 4 cut(s) 1247, 4516, 6260, 8324
Ama87I CYCGRG 7 cut(s) 92, 144, 2595, 4040, 4800, 5469, 10530
Aor51HI AGCGCT 2 cut(s) 8276, 9123
ApaLI GTGCAC 1 cut(s) 5884
ArsI GACNNNNNNTTYG 6 cut(s) 1246, 1278, 8362, 8394, 9151, 9183
AseI ATTAAT 1 cut(s) 7065
AspLEI GCGC 5 cut(s) 185, 1416, 2790, 8277, 9124
AsuC2I CCSGG 2 cut(s) 1931, 6908
AsuII TTCGAA 2 cut(s) 4299, 4486
AvaI CYCGRG 7 cut(s) 92, 144, 2595, 4040, 4800, 5469, 10530
AvaII GGWCC 7 cut(s) 45, 2110, 2578, 3604, 4226, 9780, 10306
AxyI CCTNAGG 2 cut(s) 2822, 4745
BaeGI GKGCMC 1 cut(s) 5888
BaeI ACNNNNGTAYC 4 cut(s) 2357, 2390, 3396, 3429
BalI TGGCCA 6 cut(s) 2702, 3128, 6034, 7994, 9417, 10684
BanI GGYRCC 2 cut(s) 2558, 4213
BanII GRGCYC 3 cut(s) 151, 5476, 10671
BarI GAAGNNNNNNTAC 6 cut(s) 712, 744, 4359, 4391, 4589, 4621
BauI CACGAG 1 cut(s) 1824
BbrPI CACGTG 3 cut(s) 562, 7955, 8240
BbsI GAAGAC 5 cut(s) 60, 505, 6272, 6983, 8391
Bbv12I GWGCWC 5 cut(s) 151, 463, 5476, 5512, 5888
BbvCI CCTCAGC 2 cut(s) 4694, 10429
BceAI ACGGC 3 cut(s) 1439, 7188, 7235
BcgI CGANNNNNNTGC 4 cut(s) 861, 895, 1324, 1358
BciT130I CCWGG 9 cut(s) 840, 2114, 2802, 3318, 5302, 5625, 8400, 8948, 9620
BciVI GTATCC 3 cut(s) 1565, 2358, 3397
BclI TGATCA 1 cut(s) 4032
BcnI CCSGG 2 cut(s) 1931, 6908
BcuI ACTAGT 1 cut(s) 6077
BfoI RGCGCY 2 cut(s) 8278, 9125
BfrI CTTAAG 2 cut(s) 538, 5987
BfuAI ACCTGC 6 cut(s) 1871, 2900, 3349, 6848, 7525, 8192
BfuI GTATCC 3 cut(s) 1565, 2358, 3397
BglII AGATCT 6 cut(s) 997, 2316, 3578, 4421, 4928, 9910
BlpI GCTNAGC 4 cut(s) 5207, 7530, 8271, 10541
Bme18I GGWCC 7 cut(s) 45, 2110, 2578, 3604, 4226, 9780, 10306
BmeRI GACNNNNNGTC 2 cut(s) 1434, 9033
BmeT110I CYCGRG 7 cut(s) 92, 144, 2595, 4040, 4800, 5469, 10530
BmgBI CACGTC 1 cut(s) 5794
BmiI GGNNCC 7 cut(s) 47, 968, 2560, 3606, 4215, 7034, 10668
BmrI ACTGGG 5 cut(s) 3565, 6270, 7747, 8038, 8161
BmuI ACTGGG 5 cut(s) 3565, 6270, 7747, 8038, 8161
BoxI GACNNNNGTC 1 cut(s) 10475
BpiI GAAGAC 5 cut(s) 60, 505, 6272, 6983, 8391
BplI GAGNNNNNCTC 2 cut(s) 3739, 3771
BpmI CTGGAG 8 cut(s) 706, 2208, 2823, 6025, 6375, 7428, 8621, 9682
Bpu10I CCTNAGC 4 cut(s) 4694, 9224, 10266, 10429
Bpu1102I GCTNAGC 4 cut(s) 5207, 7530, 8271, 10541
Bpu14I TTCGAA 2 cut(s) 4299, 4486
BpuMI CCSGG 2 cut(s) 1931, 6908
Bsa29I ATCGAT 4 cut(s) 871, 3437, 3762, 7080
BsaAI YACGTR 5 cut(s) 562, 4766, 7796, 7955, 8240
BsaBI GATNNNNATC 2 cut(s) 4385, 5031
BsaHI GRCGYC 2 cut(s) 8460, 8790
BsaI GGTCTC 5 cut(s) 412, 682, 3759, 7841, 10241
BsaWI WCCGGW 1 cut(s) 5996
BsaXI ACNNNNNCTCC 6 cut(s) 5245, 5275, 5581, 5611, 10658, 10688
Bse118I RCCGGY 5 cut(s) 1352, 3621, 3750, 8048, 10736
Bse21I CCTNAGG 2 cut(s) 2822, 4745
Bse8I GATNNNNATC 2 cut(s) 4385, 5031
BseBI CCWGG 9 cut(s) 840, 2114, 2802, 3318, 5302, 5625, 8400, 8948, 9620
BseCI ATCGAT 4 cut(s) 871, 3437, 3762, 7080
BseJI GATNNNNATC 2 cut(s) 4385, 5031
BseRI GAGGAG 8 cut(s) 4711, 7160, 8607, 9836, 9985, 10259, 10423, 10666
BseSI GKGCMC 1 cut(s) 5888
BseYI CCCAGC 3 cut(s) 267, 2957, 8414
BsgI GTGCAG 2 cut(s) 7956, 8472
Bsh1236I CGCG 1 cut(s) 1702
Bsh1285I CGRYCG 1 cut(s) 1700
BshNI GGYRCC 2 cut(s) 2558, 4213
BshVI ATCGAT 4 cut(s) 871, 3437, 3762, 7080
BsiEI CGRYCG 1 cut(s) 1700
BsiHKAI GWGCWC 5 cut(s) 151, 463, 5476, 5512, 5888
BsiHKCI CYCGRG 7 cut(s) 92, 144, 2595, 4040, 4800, 5469, 10530
BslFI GGGAC 8 cut(s) 31, 842, 1417, 3590, 7689, 8383, 9067, 10379
BsmBI CGTCTC 1 cut(s) 3105
BsmFI GGGAC 8 cut(s) 31, 842, 1417, 3590, 7689, 8383, 9067, 10379
BsmI GAATGC 7 cut(s) 3271, 4505, 5615, 5805, 8261, 9981, 10012
Bso31I GGTCTC 5 cut(s) 412, 682, 3759, 7841, 10241
BsoBI CYCGRG 7 cut(s) 92, 144, 2595, 4040, 4800, 5469, 10530
Bsp119I TTCGAA 2 cut(s) 4299, 4486
Bsp1286I GDGCHC 6 cut(s) 151, 463, 5476, 5512, 5888, 10671
Bsp1407I TGTACA 5 cut(s) 2097, 3412, 7074, 7623, 7879
Bsp1720I GCTNAGC 4 cut(s) 5207, 7530, 8271, 10541
Bsp19I CCATGG 3 cut(s) 4106, 4285, 9783
BspDI ATCGAT 4 cut(s) 871, 3437, 3762, 7080
BspFNI CGCG 1 cut(s) 1702
BspHI TCATGA 6 cut(s) 2680, 3148, 3508, 7972, 8968, 10039
BspLI GGNNCC 7 cut(s) 47, 968, 2560, 3606, 4215, 7034, 10668
BspMAI CTGCAG 5 cut(s) 1728, 2159, 3001, 5347, 8293
BspMI ACCTGC 6 cut(s) 1871, 2900, 3349, 6848, 7525, 8192
BspQI GCTCTTC 2 cut(s) 733, 4808
BspT104I TTCGAA 2 cut(s) 4299, 4486
BspT107I GGYRCC 2 cut(s) 2558, 4213
BspTI CTTAAG 2 cut(s) 538, 5987
BspTNI GGTCTC 5 cut(s) 412, 682, 3759, 7841, 10241
BsrBI CCGCTC 4 cut(s) 2807, 3526, 4438, 4818
BsrFI RCCGGY 5 cut(s) 1352, 3621, 3750, 8048, 10736
BsrGI TGTACA 5 cut(s) 2097, 3412, 7074, 7623, 7879
BssAI RCCGGY 5 cut(s) 1352, 3621, 3750, 8048, 10736
BssNAI GTATAC 1 cut(s) 9698
BssNI GRCGYC 2 cut(s) 8460, 8790
BssSI CACGAG 1 cut(s) 1824
BssT1I CCWWGG 8 cut(s) 1743, 1872, 4106, 4285, 6042, 9783, 10186, 10251
Bst1107I GTATAC 1 cut(s) 9698
Bst2BI CACGAG 1 cut(s) 1824
Bst2UI CCWGG 9 cut(s) 840, 2114, 2802, 3318, 5302, 5625, 8400, 8948, 9620
Bst6I CTCTTC 5 cut(s) 733, 1045, 4808, 5763, 8722
BstACI GRCGYC 2 cut(s) 8460, 8790
BstAFI CTTAAG 2 cut(s) 538, 5987
BstAPI GCANNNNNTGC 2 cut(s) 8159, 8324
BstAUI TGTACA 5 cut(s) 2097, 3412, 7074, 7623, 7879
BstBAI YACGTR 5 cut(s) 562, 4766, 7796, 7955, 8240
BstBI TTCGAA 2 cut(s) 4299, 4486
BstDSI CCRYGG 5 cut(s) 4106, 4285, 5022, 9515, 9783
BstENI CCTNNNNNAGG 2 cut(s) 4221, 8467
BstFNI CGCG 1 cut(s) 1702
BstH2I RGCGCY 2 cut(s) 8278, 9125
BstHHI GCGC 5 cut(s) 185, 1416, 2790, 8277, 9124
BstMCI CGRYCG 1 cut(s) 1700
BstNI CCWGG 9 cut(s) 840, 2114, 2802, 3318, 5302, 5625, 8400, 8948, 9620
BstPAI GACNNNNGTC 1 cut(s) 10475
BstSLI GKGCMC 1 cut(s) 5888
BstUI CGCG 1 cut(s) 1702
BstV2I GAAGAC 5 cut(s) 60, 505, 6272, 6983, 8391
BstXI CCANNNNNNTGG 5 cut(s) 963, 6030, 8225, 9700, 10316
BstZ17I GTATAC 1 cut(s) 9698
Bsu15I ATCGAT 4 cut(s) 871, 3437, 3762, 7080
Bsu36I CCTNAGG 2 cut(s) 2822, 4745
BsuI GTATCC 3 cut(s) 1565, 2358, 3397
BsuTUI ATCGAT 4 cut(s) 871, 3437, 3762, 7080
BtgI CCRYGG 5 cut(s) 4106, 4285, 5022, 9515, 9783
BtgZI GCGATG 2 cut(s) 4043, 9975
BtrI CACGTC 1 cut(s) 5794
BtsI GCAGTG 4 cut(s) 5340, 7939, 9833, 10594
BveI ACCTGC 6 cut(s) 1871, 2900, 3349, 6848, 7525, 8192
CaiI CAGNNNCTG 4 cut(s) 1247, 4516, 6260, 8324
CciI TCATGA 6 cut(s) 2680, 3148, 3508, 7972, 8968, 10039
CfoI GCGC 5 cut(s) 185, 1416, 2790, 8277, 9124
Cfr10I RCCGGY 5 cut(s) 1352, 3621, 3750, 8048, 10736
ClaI ATCGAT 4 cut(s) 871, 3437, 3762, 7080
CseI GACGC 2 cut(s) 8468, 10364
DraI TTTAAA 5 cut(s) 2146, 5053, 5062, 8508, 8703
DraIII CACNNNGTG 1 cut(s) 7337
DriI GACNNNNNGTC 2 cut(s) 1434, 9033
EaeI YGGCCR 6 cut(s) 2700, 3126, 6032, 7992, 9415, 10682
Eam1104I CTCTTC 5 cut(s) 733, 1045, 4808, 5763, 8722
Eam1105I GACNNNNNGTC 2 cut(s) 1434, 9033
EarI CTCTTC 5 cut(s) 733, 1045, 4808, 5763, 8722
Ecl136II GAGCTC 2 cut(s) 149, 5474
Eco130I CCWWGG 8 cut(s) 1743, 1872, 4106, 4285, 6042, 9783, 10186, 10251
Eco147I AGGCCT 4 cut(s) 2856, 3334, 5623, 10700
Eco24I GRGCYC 3 cut(s) 151, 5476, 10671
Eco31I GGTCTC 5 cut(s) 412, 682, 3759, 7841, 10241
Eco32I GATATC 2 cut(s) 853, 9931
Eco47I GGWCC 7 cut(s) 45, 2110, 2578, 3604, 4226, 9780, 10306
Eco47III AGCGCT 2 cut(s) 8276, 9123
Eco53kI GAGCTC 2 cut(s) 149, 5474
Eco72I CACGTG 3 cut(s) 562, 7955, 8240
Eco81I CCTNAGG 2 cut(s) 2822, 4745
Eco88I CYCGRG 7 cut(s) 92, 144, 2595, 4040, 4800, 5469, 10530
EcoICRI GAGCTC 2 cut(s) 149, 5474
EcoNI CCTNNNNNAGG 2 cut(s) 4221, 8467
EcoO109I RGGNCCY 2 cut(s) 2659, 4226
EcoRI GAATTC 4 cut(s) 1066, 2666, 3391, 6482
EcoRII CCWGG 9 cut(s) 838, 2112, 2800, 3316, 5300, 5623, 8398, 8946, 9618
EcoRV GATATC 2 cut(s) 853, 9931
EcoT14I CCWWGG 8 cut(s) 1743, 1872, 4106, 4285, 6042, 9783, 10186, 10251
EcoT22I ATGCAT 4 cut(s) 4025, 4505, 4913, 9981
EcoT38I GRGCYC 3 cut(s) 151, 5476, 10671
ErhI CCWWGG 8 cut(s) 1743, 1872, 4106, 4285, 6042, 9783, 10186, 10251
Esp3I CGTCTC 1 cut(s) 3105
FaqI GGGAC 8 cut(s) 31, 842, 1417, 3590, 7689, 8383, 9067, 10379
FauNDI CATATG 6 cut(s) 59, 1302, 1756, 2784, 4907, 6964
FbaI TGATCA 1 cut(s) 4032
FblI GTMKAC 8 cut(s) 708, 1696, 3381, 4780, 8988, 9697, 10414, 10616
FriOI GRGCYC 3 cut(s) 151, 5476, 10671
FspAI RTGCGCAY 1 cut(s) 2789
FspI TGCGCA 1 cut(s) 2789
GlaI GCGC 5 cut(s) 184, 1415, 2789, 8276, 9123
GsaI CCCAGC 3 cut(s) 271, 2961, 8418
GsuI CTGGAG 8 cut(s) 706, 2208, 2823, 6025, 6375, 7428, 8621, 9682
HaeII RGCGCY 2 cut(s) 8278, 9125
HgaI GACGC 2 cut(s) 8468, 10364
HhaI GCGC 5 cut(s) 185, 1416, 2790, 8277, 9124
Hin1I GRCGYC 2 cut(s) 8460, 8790
Hin6I GCGC 5 cut(s) 183, 1414, 2788, 8275, 9122
HinP1I GCGC 5 cut(s) 183, 1414, 2788, 8275, 9122
HincII GTYRAC 8 cut(s) 1697, 1803, 2337, 3858, 5797, 6780, 9270, 10507
HindII GTYRAC 8 cut(s) 1697, 1803, 2337, 3858, 5797, 6780, 9270, 10507
HpaI GTTAAC 1 cut(s) 6780
Hpy99I CGWCG 3 cut(s) 788, 2055, 7032
Hsp92I GRCGYC 2 cut(s) 8460, 8790
HspAI GCGC 5 cut(s) 183, 1414, 2788, 8275, 9122
KroI GCCGGC 1 cut(s) 8048
KroNI GCCGGC 1 cut(s) 8050
Ksp22I TGATCA 1 cut(s) 4032
KspAI GTTAAC 1 cut(s) 6780
LguI GCTCTTC 2 cut(s) 733, 4808
LmnI GCTCC 8 cut(s) 2470, 2804, 5253, 5891, 7038, 7447, 7526, 10666
MbiI CCGCTC 4 cut(s) 2807, 3526, 4438, 4818
MhlI GDGCHC 6 cut(s) 151, 463, 5476, 5512, 5888, 10671
MlsI TGGCCA 6 cut(s) 2702, 3128, 6034, 7994, 9417, 10684
MluNI TGGCCA 6 cut(s) 2702, 3128, 6034, 7994, 9417, 10684
Mox20I TGGCCA 6 cut(s) 2702, 3128, 6034, 7994, 9417, 10684
Mph1103I ATGCAT 4 cut(s) 4025, 4505, 4913, 9981
MroNI GCCGGC 1 cut(s) 8048
MscI TGGCCA 6 cut(s) 2702, 3128, 6034, 7994, 9417, 10684
Msp20I TGGCCA 6 cut(s) 2702, 3128, 6034, 7994, 9417, 10684
MspA1I CMGCKG 2 cut(s) 6479, 8456
MspCI CTTAAG 2 cut(s) 538, 5987
MssI GTTTAAAC 1 cut(s) 2146
Mva1269I GAATGC 7 cut(s) 3271, 4505, 5615, 5805, 8261, 9981, 10012
MvaI CCWGG 9 cut(s) 840, 2114, 2802, 3318, 5302, 5625, 8400, 8948, 9620
MvnI CGCG 1 cut(s) 1702
NaeI GCCGGC 1 cut(s) 8050
NciI CCSGG 2 cut(s) 1931, 6908
NcoI CCATGG 3 cut(s) 4106, 4285, 9783
NdeI CATATG 6 cut(s) 59, 1302, 1756, 2784, 4907, 6964
NgoMIV GCCGGC 1 cut(s) 8048
NlaIV GGNNCC 7 cut(s) 47, 968, 2560, 3606, 4215, 7034, 10668
NmuCI GTSAC 9 cut(s) 384, 397, 1034, 1426, 1750, 3467, 4133, 6008, 10334
NsbI TGCGCA 1 cut(s) 2789
NsiI ATGCAT 4 cut(s) 4025, 4505, 4913, 9981
NspV TTCGAA 2 cut(s) 4299, 4486
OliI CACNNNNGTG 1 cut(s) 8223
PaeI GCATGC 3 cut(s) 1352, 5215, 10549
PaeR7I CTCGAG 5 cut(s) 144, 2595, 4800, 5469, 10530
PagI TCATGA 6 cut(s) 2680, 3148, 3508, 7972, 8968, 10039
PaqCI CACCTGC 1 cut(s) 1871
PceI AGGCCT 4 cut(s) 2856, 3334, 5623, 10700
PciI ACATGT 3 cut(s) 4783, 5880, 6430
PciSI GCTCTTC 2 cut(s) 733, 4808
PcsI WCGNNNNNNNCGW 5 cut(s) 558, 3768, 7036, 8764, 9237
PctI GAATGC 7 cut(s) 3271, 4505, 5615, 5805, 8261, 9981, 10012
PdiI GCCGGC 1 cut(s) 8050
PflMI CCANNNNNTGG 2 cut(s) 862, 7433
PfoI TCCNGGA 4 cut(s) 2112, 2800, 5300, 9618
PmaCI CACGTG 3 cut(s) 562, 7955, 8240
PmeI GTTTAAAC 1 cut(s) 2146
PmlI CACGTG 3 cut(s) 562, 7955, 8240
Ppu21I YACGTR 5 cut(s) 562, 4766, 7796, 7955, 8240
PpuMI RGGWCCY 1 cut(s) 4226
PscI ACATGT 3 cut(s) 4783, 5880, 6430
PshAI GACNNNNGTC 1 cut(s) 10475
PshBI ATTAAT 1 cut(s) 7065
PsiI TTATAA 3 cut(s) 4082, 4167, 6587
Psp124BI GAGCTC 2 cut(s) 151, 5476
Psp5II RGGWCCY 1 cut(s) 4226
Psp6I CCWGG 9 cut(s) 838, 2112, 2800, 3316, 5300, 5623, 8398, 8946, 9618
PspCI CACGTG 3 cut(s) 562, 7955, 8240
PspFI CCCAGC 3 cut(s) 267, 2957, 8414
PspGI CCWGG 9 cut(s) 838, 2112, 2800, 3316, 5300, 5623, 8398, 8946, 9618
PspN4I GGNNCC 7 cut(s) 47, 968, 2560, 3606, 4215, 7034, 10668
PspPPI RGGWCCY 1 cut(s) 4226
PspXI VCTCGAGB 3 cut(s) 144, 4800, 5469
PstI CTGCAG 5 cut(s) 1728, 2159, 3001, 5347, 8293
PstNI CAGNNNCTG 4 cut(s) 1247, 4516, 6260, 8324
PvuII CAGCTG 2 cut(s) 6479, 8456
SacI GAGCTC 2 cut(s) 151, 5476
SalI GTCGAC 1 cut(s) 1695
SapI GCTCTTC 2 cut(s) 733, 4808
SduI GDGCHC 6 cut(s) 151, 463, 5476, 5512, 5888, 10671
Sfr274I CTCGAG 5 cut(s) 144, 2595, 4800, 5469, 10530
SfuI TTCGAA 2 cut(s) 4299, 4486
SinI GGWCC 7 cut(s) 45, 2110, 2578, 3604, 4226, 9780, 10306
SlaI CTCGAG 5 cut(s) 144, 2595, 4800, 5469, 10530
SpeI ACTAGT 1 cut(s) 6077
SphI GCATGC 3 cut(s) 1352, 5215, 10549
SseBI AGGCCT 4 cut(s) 2856, 3334, 5623, 10700
SstI GAGCTC 2 cut(s) 151, 5476
StuI AGGCCT 4 cut(s) 2856, 3334, 5623, 10700
StyI CCWWGG 8 cut(s) 1743, 1872, 4106, 4285, 6042, 9783, 10186, 10251
TaqII GACCGA 2 cut(s) 1161, 3592
TauI GCSGC 7 cut(s) 2810, 2834, 4441, 5243, 6790, 10577, 10718
TseFI GTSAC 9 cut(s) 384, 397, 1034, 1426, 1750, 3467, 4133, 6008, 10334
Tsp45I GTSAC 9 cut(s) 384, 397, 1034, 1426, 1750, 3467, 4133, 6008, 10334
TspGWI ACGGA 3 cut(s) 2570, 6827, 7675
Van91I CCANNNNNTGG 2 cut(s) 862, 7433
Vha464I CTTAAG 2 cut(s) 538, 5987
VneI GTGCAC 1 cut(s) 5884
VpaK11BI GGWCC 7 cut(s) 45, 2110, 2578, 3604, 4226, 9780, 10306
VspI ATTAAT 1 cut(s) 7065
XagI CCTNNNNNAGG 2 cut(s) 4221, 8467
XbaI TCTAGA 3 cut(s) 4090, 5195, 7460
XcmI CCANNNNNNNNNTGG 2 cut(s) 7734, 10288
XhoI CTCGAG 5 cut(s) 144, 2595, 4800, 5469, 10530
XmiI GTMKAC 8 cut(s) 708, 1696, 3381, 4780, 8988, 9697, 10414, 10616
ZraI GACGTC 1 cut(s) 8791
Zsp2I ATGCAT 4 cut(s) 4025, 4505, 4913, 9981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.