TPR and ankyrin repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF6469 | PF20073 | 78 - 206 | 1.4e-65 | Domain of unknown function (DUF6469) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 187 |
| AdeI | CACNNNGTG | 1 cut(s) | 142 |
| AfaI | GTAC | 1 cut(s) | 481 |
| AflIII | ACRYGT | 1 cut(s) | 603 |
| AgsI | TTSAA | 4 cut(s) | 88, 103, 257, 521 |
| AjnI | CCWGG | 1 cut(s) | 355 |
| AluBI | AGCT | 2 cut(s) | 283, 596 |
| AluI | AGCT | 2 cut(s) | 283, 596 |
| Alw21I | GWGCWC | 2 cut(s) | 232, 644 |
| Alw26I | GTCTC | 3 cut(s) | 47, 101, 457 |
| Alw44I | GTGCAC | 1 cut(s) | 640 |
| Ama87I | CYCGRG | 1 cut(s) | 155 |
| ApaLI | GTGCAC | 1 cut(s) | 640 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 120, 132 |
| AspLEI | GCGC | 1 cut(s) | 196 |
| AspS9I | GGNCC | 2 cut(s) | 69, 199 |
| AsuHPI | GGTGA | 1 cut(s) | 371 |
| AvaI | CYCGRG | 1 cut(s) | 155 |
| AvaII | GGWCC | 2 cut(s) | 69, 199 |
| BaeGI | GKGCMC | 1 cut(s) | 644 |
| Bbv12I | GWGCWC | 2 cut(s) | 232, 644 |
| BciT130I | CCWGG | 1 cut(s) | 357 |
| BciVI | GTATCC | 1 cut(s) | 180 |
| BcoDI | GTCTC | 3 cut(s) | 47, 101, 457 |
| BfaI | CTAG | 1 cut(s) | 560 |
| BfuAI | ACCTGC | 1 cut(s) | 187 |
| BfuI | GTATCC | 1 cut(s) | 180 |
| BmcAI | AGTACT | 1 cut(s) | 481 |
| Bme1390I | CCNGG | 1 cut(s) | 357 |
| Bme18I | GGWCC | 2 cut(s) | 69, 199 |
| BmeT110I | CYCGRG | 1 cut(s) | 155 |
| BmgT120I | GGNCC | 2 cut(s) | 69, 199 |
| BmiI | GGNNCC | 1 cut(s) | 71 |
| BmrFI | CCNGG | 1 cut(s) | 357 |
| BmsI | GCATC | 2 cut(s) | 446, 548 |
| BsaJI | CCNNGG | 2 cut(s) | 154, 328 |
| BseBI | CCWGG | 1 cut(s) | 357 |
| BseDI | CCNNGG | 2 cut(s) | 154, 328 |
| BseGI | GGATG | 1 cut(s) | 478 |
| BseMII | CTCAG | 2 cut(s) | 42, 468 |
| BseSI | GKGCMC | 1 cut(s) | 644 |
| BsiHKAI | GWGCWC | 2 cut(s) | 232, 644 |
| BsiHKCI | CYCGRG | 1 cut(s) | 155 |
| BslFI | GGGAC | 1 cut(s) | 55 |
| BsmAI | GTCTC | 3 cut(s) | 47, 101, 457 |
| BsmBI | CGTCTC | 1 cut(s) | 101 |
| BsmFI | GGGAC | 1 cut(s) | 55 |
| BsoBI | CYCGRG | 1 cut(s) | 155 |
| Bsp1286I | GDGCHC | 2 cut(s) | 232, 644 |
| Bsp143I | GATC | 1 cut(s) | 361 |
| BspCNI | CTCAG | 2 cut(s) | 43, 467 |
| BspLI | GGNNCC | 1 cut(s) | 71 |
| BspMI | ACCTGC | 1 cut(s) | 187 |
| BssECI | CCNNGG | 2 cut(s) | 154, 328 |
| BssMI | GATC | 1 cut(s) | 361 |
| Bst2UI | CCWGG | 1 cut(s) | 357 |
| Bst4CI | ACNGT | 3 cut(s) | 58, 329, 546 |
| Bst6I | CTCTTC | 1 cut(s) | 104 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 236 |
| BstDEI | CTNAG | 2 cut(s) | 51, 454 |
| BstDSI | CCRYGG | 1 cut(s) | 328 |
| BstF5I | GGATG | 1 cut(s) | 478 |
| BstHHI | GCGC | 1 cut(s) | 196 |
| BstKTI | GATC | 1 cut(s) | 364 |
| BstMAI | GTCTC | 3 cut(s) | 47, 101, 457 |
| BstMBI | GATC | 1 cut(s) | 361 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 34, 236 |
| BstNI | CCWGG | 1 cut(s) | 357 |
| BstNSI | RCATGY | 1 cut(s) | 607 |
| BstSCI | CCNGG | 1 cut(s) | 355 |
| BstSLI | GKGCMC | 1 cut(s) | 644 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 46 |
| BsuI | GTATCC | 1 cut(s) | 180 |
| BtgI | CCRYGG | 1 cut(s) | 328 |
| BtsCI | GGATG | 1 cut(s) | 478 |
| BtsIMutI | CAGTG | 2 cut(s) | 542, 642 |
| BveI | ACCTGC | 1 cut(s) | 187 |
| CfoI | GCGC | 1 cut(s) | 196 |
| Cfr13I | GGNCC | 2 cut(s) | 69, 199 |
| Csp6I | GTAC | 1 cut(s) | 480 |
| CviAII | CATG | 3 cut(s) | 203, 426, 604 |
| CviJI | RGCY | 9 cut(s) | 28, 37, 50, 268, 283, 340, 431, 506, 596 |
| CviKI_1 | RGCY | 9 cut(s) | 28, 37, 50, 268, 283, 340, 431, 506, 596 |
| CviQI | GTAC | 1 cut(s) | 480 |
| DdeI | CTNAG | 2 cut(s) | 51, 454 |
| DpnI | GATC | 1 cut(s) | 363 |
| DpnII | GATC | 1 cut(s) | 361 |
| DraI | TTTAAA | 1 cut(s) | 496 |
| DraIII | CACNNNGTG | 1 cut(s) | 142 |
| Eam1104I | CTCTTC | 1 cut(s) | 104 |
| EarI | CTCTTC | 1 cut(s) | 104 |
| Eco32I | GATATC | 1 cut(s) | 292 |
| Eco47I | GGWCC | 2 cut(s) | 69, 199 |
| Eco88I | CYCGRG | 1 cut(s) | 155 |
| EcoRII | CCWGG | 1 cut(s) | 355 |
| EcoRV | GATATC | 1 cut(s) | 292 |
| Esp3I | CGTCTC | 1 cut(s) | 101 |
| FaeI | CATG | 3 cut(s) | 206, 429, 607 |
| FaqI | GGGAC | 1 cut(s) | 55 |
| FatI | CATG | 3 cut(s) | 202, 425, 603 |
| FauNDI | CATATG | 2 cut(s) | 271, 343 |
| FokI | GGATG | 1 cut(s) | 485 |
| FspBI | CTAG | 1 cut(s) | 560 |
| GlaI | GCGC | 1 cut(s) | 195 |
| HhaI | GCGC | 1 cut(s) | 196 |
| Hin1II | CATG | 3 cut(s) | 206, 429, 607 |
| Hin6I | GCGC | 1 cut(s) | 194 |
| HinP1I | GCGC | 1 cut(s) | 194 |
| HindIII | AAGCTT | 1 cut(s) | 594 |
| HinfI | GANTC | 3 cut(s) | 121, 128, 647 |
| HphI | GGTGA | 1 cut(s) | 371 |
| Hpy166II | GTNNAC | 3 cut(s) | 14, 565, 642 |
| Hpy188I | TCNGA | 2 cut(s) | 403, 457 |
| Hpy188III | TCNNGA | 3 cut(s) | 103, 125, 574 |
| Hpy8I | GTNNAC | 3 cut(s) | 14, 565, 642 |
| HpyCH4III | ACNGT | 3 cut(s) | 58, 329, 546 |
| HpyCH4IV | ACGT | 1 cut(s) | 94 |
| HpyCH4V | TGCA | 4 cut(s) | 206, 437, 601, 642 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 34, 236 |
| HpyF3I | CTNAG | 2 cut(s) | 51, 454 |
| HpySE526I | ACGT | 1 cut(s) | 94 |
| Hsp92II | CATG | 3 cut(s) | 206, 429, 607 |
| HspAI | GCGC | 1 cut(s) | 194 |
| Kzo9I | GATC | 1 cut(s) | 361 |
| LmnI | GCTCC | 1 cut(s) | 145 |
| LpnPI | CCDG | 7 cut(s) | 138, 182, 301, 342, 369, 402, 629 |
| LweI | GCATC | 2 cut(s) | 446, 548 |
| MaeI | CTAG | 1 cut(s) | 560 |
| MaeII | ACGT | 1 cut(s) | 94 |
| MaeIII | GTNAC | 1 cut(s) | 442 |
| MalI | GATC | 1 cut(s) | 363 |
| MboI | GATC | 1 cut(s) | 361 |
| MboII | GAAGA | 3 cut(s) | 91, 194, 594 |
| MhlI | GDGCHC | 2 cut(s) | 232, 644 |
| MnlI | CCTC | 3 cut(s) | 164, 414, 463 |
| MroXI | GAANNNNTTC | 2 cut(s) | 120, 132 |
| MseI | TTAA | 3 cut(s) | 320, 495, 569 |
| MspR9I | CCNGG | 1 cut(s) | 357 |
| MvaI | CCWGG | 1 cut(s) | 357 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 34, 236 |
| NdeI | CATATG | 2 cut(s) | 271, 343 |
| NdeII | GATC | 1 cut(s) | 361 |
| NlaIII | CATG | 3 cut(s) | 206, 429, 607 |
| NlaIV | GGNNCC | 1 cut(s) | 71 |
| NmuCI | GTSAC | 1 cut(s) | 442 |
| NspI | RCATGY | 1 cut(s) | 607 |
| PciI | ACATGT | 1 cut(s) | 603 |
| PdmI | GAANNNNTTC | 2 cut(s) | 120, 132 |
| PfeI | GAWTC | 3 cut(s) | 121, 128, 647 |
| PscI | ACATGT | 1 cut(s) | 603 |
| Psp6I | CCWGG | 1 cut(s) | 355 |
| PspGI | CCWGG | 1 cut(s) | 355 |
| PspN4I | GGNNCC | 1 cut(s) | 71 |
| PspPI | GGNCC | 2 cut(s) | 69, 199 |
| RsaI | GTAC | 1 cut(s) | 481 |
| RsaNI | GTAC | 1 cut(s) | 480 |
| SaqAI | TTAA | 3 cut(s) | 320, 495, 569 |
| Sau3AI | GATC | 1 cut(s) | 361 |
| Sau96I | GGNCC | 2 cut(s) | 69, 199 |
| ScaI | AGTACT | 1 cut(s) | 481 |
| ScrFI | CCNGG | 1 cut(s) | 357 |
| SduI | GDGCHC | 2 cut(s) | 232, 644 |
| SfaNI | GCATC | 2 cut(s) | 446, 548 |
| SinI | GGWCC | 2 cut(s) | 69, 199 |
| SspMI | CTAG | 1 cut(s) | 560 |
| StyD4I | CCNGG | 1 cut(s) | 355 |
| TaaI | ACNGT | 3 cut(s) | 58, 329, 546 |
| TaiI | ACGT | 1 cut(s) | 97 |
| TatI | WGTACW | 1 cut(s) | 479 |
| TfiI | GAWTC | 3 cut(s) | 121, 128, 647 |
| Tru1I | TTAA | 3 cut(s) | 320, 495, 569 |
| Tru9I | TTAA | 3 cut(s) | 320, 495, 569 |
| TscAI | CASTG | 2 cut(s) | 549, 649 |
| TseFI | GTSAC | 1 cut(s) | 442 |
| Tsp45I | GTSAC | 1 cut(s) | 442 |
| TspDTI | ATGAA | 3 cut(s) | 105, 360, 489 |
| TspRI | CASTG | 2 cut(s) | 549, 649 |
| VneI | GTGCAC | 1 cut(s) | 640 |
| VpaK11BI | GGWCC | 2 cut(s) | 69, 199 |
| XceI | RCATGY | 1 cut(s) | 607 |
| XmnI | GAANNNNTTC | 2 cut(s) | 120, 132 |
| XspI | CTAG | 1 cut(s) | 560 |
| ZrmI | AGTACT | 1 cut(s) | 481 |