TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2069, 2342 |
| AarI | CACCTGC | 1 cut(s) | 4432 |
| Acc36I | ACCTGC | 3 cut(s) | 2868, 4432, 5129 |
| AccB1I | GGYRCC | 1 cut(s) | 3354 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1094, 2745 |
| AccI | GTMKAC | 1 cut(s) | 1371 |
| AccII | CGCG | 1 cut(s) | 5156 |
| AciI | CCGC | 5 cut(s) | 2158, 2929, 3525, 3937, 5011 |
| AclWI | GGATC | 4 cut(s) | 96, 1981, 2352, 3063 |
| AcoI | YGGCCR | 2 cut(s) | 435, 4929 |
| AdeI | CACNNNGTG | 1 cut(s) | 4938 |
| AfaI | GTAC | 8 cut(s) | 820, 1342, 2168, 2355, 2649, 2828, 4240, 4562 |
| AfeI | AGCGCT | 1 cut(s) | 4658 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 741, 742, 821, 1094, 2745, 3052, 3592 |
| AflIII | ACRYGT | 3 cut(s) | 597, 3493, 4038 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3462 |
| AjnI | CCWGG | 6 cut(s) | 66, 448, 814, 1780, 2038, 4848 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 3351, 3383, 3594, 3626, 4139, 4171 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1160, 1192, 5011, 5043 |
| Alw21I | GWGCWC | 6 cut(s) | 226, 895, 1243, 1338, 4471, 4700 |
| Alw26I | GTCTC | 8 cut(s) | 1181, 1437, 2188, 2220, 2416, 2743, 2765, 4010 |
| AlwI | GGATC | 4 cut(s) | 96, 1981, 2352, 3063 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 3305, 3425, 5096 |
| Ama87I | CYCGRG | 1 cut(s) | 183 |
| Aor51HI | AGCGCT | 1 cut(s) | 4658 |
| ApeKI | GCWGC | 8 cut(s) | 769, 1687, 1736, 2225, 3419, 4828, 5060, 5099 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2163, 2195, 3008, 3040 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 126, 659, 990, 2464, 2675, 4215 |
| AspLEI | GCGC | 3 cut(s) | 3444, 4659, 5158 |
| AspS9I | GGNCC | 8 cut(s) | 63, 809, 1085, 2054, 2108, 2497, 3814, 4534 |
| AsuC2I | CCSGG | 5 cut(s) | 351, 1991, 3046, 3788, 3818 |
| AvaI | CYCGRG | 1 cut(s) | 183 |
| AvaII | GGWCC | 5 cut(s) | 63, 809, 2054, 2108, 2497 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4271, 4304 |
| BalI | TGGCCA | 1 cut(s) | 4931 |
| BanI | GGYRCC | 1 cut(s) | 3354 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3915, 3947 |
| BauI | CACGAG | 1 cut(s) | 4890 |
| BbsI | GAAGAC | 2 cut(s) | 2547, 4776 |
| Bbv12I | GWGCWC | 6 cut(s) | 226, 895, 1243, 1338, 4471, 4700 |
| BbvI | GCAGC | 8 cut(s) | 756, 1674, 1723, 2212, 3431, 4840, 5047, 5086 |
| BceAI | ACGGC | 3 cut(s) | 776, 1041, 1643 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1659, 1693 |
| BciT130I | CCWGG | 6 cut(s) | 68, 450, 816, 1782, 2040, 4850 |
| BclI | TGATCA | 1 cut(s) | 3967 |
| BcnI | CCSGG | 5 cut(s) | 351, 1991, 3046, 3788, 3818 |
| BcoDI | GTCTC | 8 cut(s) | 1181, 1437, 2188, 2220, 2416, 2743, 2765, 4010 |
| BfaI | CTAG | 5 cut(s) | 173, 2427, 2637, 3396, 4832 |
| BfmI | CTRYAG | 4 cut(s) | 863, 2901, 3417, 3759 |
| BfoI | RGCGCY | 1 cut(s) | 4660 |
| BfuAI | ACCTGC | 3 cut(s) | 2868, 4432, 5129 |
| BglII | AGATCT | 1 cut(s) | 2883 |
| BisI | GCNGC | 8 cut(s) | 770, 1688, 1737, 2226, 3420, 4829, 5061, 5100 |
| BlpI | GCTNAGC | 1 cut(s) | 138 |
| BlsI | GCNGC | 8 cut(s) | 771, 1689, 1738, 2227, 3421, 4830, 5062, 5101 |
| Bme18I | GGWCC | 5 cut(s) | 63, 809, 2054, 2108, 2497 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3462 |
| BmeT110I | CYCGRG | 1 cut(s) | 183 |
| BmgT120I | GGNCC | 8 cut(s) | 63, 809, 1085, 2054, 2108, 2497, 3814, 4534 |
| BmiI | GGNNCC | 7 cut(s) | 65, 333, 810, 1086, 1707, 3012, 3356 |
| BmrI | ACTGGG | 3 cut(s) | 750, 3315, 4975 |
| BmuI | ACTGGG | 3 cut(s) | 750, 3315, 4975 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2693 |
| BpiI | GAAGAC | 2 cut(s) | 2547, 4776 |
| BpmI | CTGGAG | 6 cut(s) | 89, 936, 3026, 3242, 4338, 4392 |
| Bpu10I | CCTNAGC | 3 cut(s) | 3468, 3751, 4653 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 138 |
| BpuEI | CTTGAG | 6 cut(s) | 1154, 1227, 1419, 2214, 3929, 4559 |
| BpuMI | CCSGG | 5 cut(s) | 351, 1991, 3046, 3788, 3818 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3000 |
| BsaI | GGTCTC | 2 cut(s) | 2743, 4010 |
| BsaJI | CCNNGG | 7 cut(s) | 66, 448, 792, 1088, 2556, 3817, 4848 |
| BsaWI | WCCGGW | 1 cut(s) | 1401 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 741, 742, 821, 1094, 2745, 3052, 3592 |
| Bse118I | RCCGGY | 1 cut(s) | 3939 |
| Bse3DI | GCAATG | 3 cut(s) | 1707, 2052, 4860 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3000 |
| BseBI | CCWGG | 6 cut(s) | 68, 450, 816, 1782, 2040, 4850 |
| BseDI | CCNNGG | 7 cut(s) | 66, 448, 792, 1088, 2556, 3817, 4848 |
| BseGI | GGATG | 8 cut(s) | 458, 1489, 1939, 1999, 2110, 2494, 3380, 4555 |
| BseJI | GATNNNNATC | 1 cut(s) | 3000 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 741, 742, 821, 1094, 2745, 3052, 3592 |
| BseMI | GCAATG | 3 cut(s) | 1707, 2052, 4860 |
| BseMII | CTCAG | 4 cut(s) | 152, 2212, 3089, 3796 |
| BseRI | GAGGAG | 2 cut(s) | 3590, 4892 |
| BseXI | GCAGC | 8 cut(s) | 756, 1674, 1723, 2212, 3431, 4840, 5047, 5086 |
| BsgI | GTGCAG | 3 cut(s) | 1047, 1722, 4455 |
| Bsh1236I | CGCG | 1 cut(s) | 5156 |
| BshNI | GGYRCC | 1 cut(s) | 3354 |
| BsiHKAI | GWGCWC | 6 cut(s) | 226, 895, 1243, 1338, 4471, 4700 |
| BsiHKCI | CYCGRG | 1 cut(s) | 183 |
| BsiSI | CCGG | 8 cut(s) | 351, 1402, 1990, 3046, 3787, 3817, 3940, 4989 |
| BslFI | GGGAC | 5 cut(s) | 49, 431, 2903, 3306, 3694 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 741, 742, 821, 1094, 2745, 3052, 3592 |
| BsmAI | GTCTC | 8 cut(s) | 1181, 1437, 2188, 2220, 2416, 2743, 2765, 4010 |
| BsmFI | GGGAC | 5 cut(s) | 49, 431, 2903, 3306, 3694 |
| BsmI | GAATGC | 4 cut(s) | 196, 772, 1232, 1941 |
| Bso31I | GGTCTC | 2 cut(s) | 2743, 4010 |
| BsoBI | CYCGRG | 1 cut(s) | 183 |
| Bsp1286I | GDGCHC | 6 cut(s) | 226, 895, 1243, 1338, 4471, 4700 |
| Bsp1407I | TGTACA | 3 cut(s) | 2166, 2826, 4560 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 138 |
| BspACI | CCGC | 5 cut(s) | 2158, 2929, 3525, 3937, 5011 |
| BspCNI | CTCAG | 4 cut(s) | 151, 2211, 3088, 3795 |
| BspFNI | CGCG | 1 cut(s) | 5156 |
| BspHI | TCATGA | 3 cut(s) | 3613, 4392, 4909 |
| BspLI | GGNNCC | 7 cut(s) | 65, 333, 810, 1086, 1707, 3012, 3356 |
| BspMAI | CTGCAG | 1 cut(s) | 3421 |
| BspMI | ACCTGC | 3 cut(s) | 2868, 4432, 5129 |
| BspPI | GGATC | 4 cut(s) | 96, 1981, 2352, 3063 |
| BspQI | GCTCTTC | 1 cut(s) | 2794 |
| BspT107I | GGYRCC | 1 cut(s) | 3354 |
| BspTNI | GGTCTC | 2 cut(s) | 2743, 4010 |
| BsrDI | GCAATG | 3 cut(s) | 1707, 2052, 4860 |
| BsrFI | RCCGGY | 1 cut(s) | 3939 |
| BsrGI | TGTACA | 3 cut(s) | 2166, 2826, 4560 |
| BssAI | RCCGGY | 1 cut(s) | 3939 |
| BssECI | CCNNGG | 7 cut(s) | 66, 448, 792, 1088, 2556, 3817, 4848 |
| BssSI | CACGAG | 1 cut(s) | 4890 |
| BssT1I | CCWWGG | 2 cut(s) | 1088, 2556 |
| Bst2BI | CACGAG | 1 cut(s) | 4890 |
| Bst2UI | CCWGG | 6 cut(s) | 68, 450, 816, 1782, 2040, 4850 |
| Bst6I | CTCTTC | 9 cut(s) | 1228, 2080, 2085, 2322, 2794, 3243, 3342, 4050, 5028 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 230, 5096 |
| BstAUI | TGTACA | 3 cut(s) | 2166, 2826, 4560 |
| BstC8I | GCNNGC | 9 cut(s) | 302, 757, 1794, 3446, 3836, 3941, 4503, 4867, 5015 |
| BstDSI | CCRYGG | 1 cut(s) | 792 |
| BstEII | GGTNACC | 1 cut(s) | 3024 |
| BstF5I | GGATG | 8 cut(s) | 458, 1489, 1939, 1999, 2110, 2494, 3380, 4555 |
| BstFNI | CGCG | 1 cut(s) | 5156 |
| BstH2I | RGCGCY | 1 cut(s) | 4660 |
| BstHHI | GCGC | 3 cut(s) | 3444, 4659, 5158 |
| BstMAI | GTCTC | 8 cut(s) | 1181, 1437, 2188, 2220, 2416, 2743, 2765, 4010 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 230, 752, 1865, 3764, 4825, 5096 |
| BstNI | CCWGG | 6 cut(s) | 68, 450, 816, 1782, 2040, 4850 |
| BstNSI | RCATGY | 7 cut(s) | 601, 1796, 3497, 3522, 3771, 4042, 5017 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2693 |
| BstPI | GGTNACC | 1 cut(s) | 3024 |
| BstSFI | CTRYAG | 4 cut(s) | 863, 2901, 3417, 3759 |
| BstUI | CGCG | 1 cut(s) | 5156 |
| BstV1I | GCAGC | 8 cut(s) | 756, 1674, 1723, 2212, 3431, 4840, 5047, 5086 |
| BstV2I | GAAGAC | 2 cut(s) | 2547, 4776 |
| BstX2I | RGATCY | 3 cut(s) | 88, 2883, 3055 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3021, 4881 |
| BstYI | RGATCY | 3 cut(s) | 88, 2883, 3055 |
| BtgI | CCRYGG | 1 cut(s) | 792 |
| BtsCI | GGATG | 8 cut(s) | 458, 1489, 1939, 1999, 2110, 2494, 3380, 4555 |
| BtsI | GCAGTG | 2 cut(s) | 753, 1665 |
| BveI | ACCTGC | 3 cut(s) | 2868, 4432, 5129 |
| Cac8I | GCNNGC | 9 cut(s) | 302, 757, 1794, 3446, 3836, 3941, 4503, 4867, 5015 |
| CaiI | CAGNNNCTG | 3 cut(s) | 3305, 3425, 5096 |
| CciI | TCATGA | 3 cut(s) | 3613, 4392, 4909 |
| CfoI | GCGC | 3 cut(s) | 3444, 4659, 5158 |
| Cfr10I | RCCGGY | 1 cut(s) | 3939 |
| Cfr13I | GGNCC | 8 cut(s) | 63, 809, 1085, 2054, 2108, 2497, 3814, 4534 |
| Csp6I | GTAC | 8 cut(s) | 819, 1341, 2167, 2354, 2648, 2827, 4239, 4561 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 4842, 4877 |
| CviQI | GTAC | 8 cut(s) | 819, 1341, 2167, 2354, 2648, 2827, 4239, 4561 |
| DraI | TTTAAA | 3 cut(s) | 1920, 4033, 4320 |
| DraIII | CACNNNGTG | 1 cut(s) | 4938 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3462 |
| EaeI | YGGCCR | 2 cut(s) | 435, 4929 |
| Eam1104I | CTCTTC | 9 cut(s) | 1228, 2080, 2085, 2322, 2794, 3243, 3342, 4050, 5028 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3462 |
| EarI | CTCTTC | 9 cut(s) | 1228, 2080, 2085, 2322, 2794, 3243, 3342, 4050, 5028 |
| EciI | GGCGGA | 1 cut(s) | 3540 |
| Eco130I | CCWWGG | 2 cut(s) | 1088, 2556 |
| Eco147I | AGGCCT | 2 cut(s) | 1105, 4200 |
| Eco31I | GGTCTC | 2 cut(s) | 2743, 4010 |
| Eco32I | GATATC | 2 cut(s) | 2911, 3598 |
| Eco47I | GGWCC | 5 cut(s) | 63, 809, 2054, 2108, 2497 |
| Eco47III | AGCGCT | 1 cut(s) | 4658 |
| Eco88I | CYCGRG | 1 cut(s) | 183 |
| Eco91I | GGTNACC | 1 cut(s) | 3024 |
| EcoO109I | RGGNCCY | 2 cut(s) | 809, 4534 |
| EcoO65I | GGTNACC | 1 cut(s) | 3024 |
| EcoRI | GAATTC | 3 cut(s) | 2381, 3124, 3902 |
| EcoRII | CCWGG | 6 cut(s) | 66, 448, 814, 1780, 2038, 4848 |
| EcoRV | GATATC | 2 cut(s) | 2911, 3598 |
| EcoT14I | CCWWGG | 2 cut(s) | 1088, 2556 |
| EcoT22I | ATGCAT | 2 cut(s) | 1941, 3769 |
| ErhI | CCWWGG | 2 cut(s) | 1088, 2556 |
| FaqI | GGGAC | 5 cut(s) | 49, 431, 2903, 3306, 3694 |
| FauNDI | CATATG | 1 cut(s) | 265 |
| FbaI | TGATCA | 1 cut(s) | 3967 |
| FblI | GTMKAC | 1 cut(s) | 1371 |
| Fnu4HI | GCNGC | 8 cut(s) | 770, 1688, 1737, 2226, 3420, 4829, 5061, 5100 |
| FokI | GGATG | 8 cut(s) | 465, 1496, 1926, 2006, 2117, 2501, 3387, 4562 |
| Fsp4HI | GCNGC | 8 cut(s) | 770, 1688, 1737, 2226, 3420, 4829, 5061, 5100 |
| FspBI | CTAG | 5 cut(s) | 173, 2427, 2637, 3396, 4832 |
| GlaI | GCGC | 3 cut(s) | 3443, 4658, 5157 |
| GluI | GCNGC | 8 cut(s) | 770, 1688, 1737, 2226, 3420, 4829, 5061, 5100 |
| GsuI | CTGGAG | 6 cut(s) | 89, 936, 3026, 3242, 4338, 4392 |
| HaeII | RGCGCY | 1 cut(s) | 4660 |
| HapII | CCGG | 8 cut(s) | 351, 1402, 1990, 3046, 3787, 3817, 3940, 4989 |
| HhaI | GCGC | 3 cut(s) | 3444, 4659, 5158 |
| Hin6I | GCGC | 3 cut(s) | 3442, 4657, 5156 |
| HinP1I | GCGC | 3 cut(s) | 3442, 4657, 5156 |
| HincII | GTYRAC | 3 cut(s) | 1589, 1761, 4224 |
| HindII | GTYRAC | 3 cut(s) | 1589, 1761, 4224 |
| HindIII | AAGCTT | 5 cut(s) | 1455, 1873, 2273, 2732, 3698 |
| HpaII | CCGG | 8 cut(s) | 351, 1402, 1990, 3046, 3787, 3817, 3940, 4989 |
| Hpy166II | GTNNAC | 8 cut(s) | 1130, 1179, 1372, 1589, 1761, 3187, 3779, 4224 |
| Hpy8I | GTNNAC | 8 cut(s) | 1130, 1179, 1372, 1589, 1761, 3187, 3779, 4224 |
| Hpy99I | CGWCG | 2 cut(s) | 2520, 4476 |
| HpyAV | CCTTC | 8 cut(s) | 408, 1536, 2287, 2638, 2813, 3422, 4615, 4968 |
| HpyCH4IV | ACGT | 1 cut(s) | 2868 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 230, 752, 1865, 3764, 4825, 5096 |
| HpySE526I | ACGT | 1 cut(s) | 2868 |
| HspAI | GCGC | 3 cut(s) | 3442, 4657, 5156 |
| KroI | GCCGGC | 1 cut(s) | 3939 |
| KroNI | GCCGGC | 1 cut(s) | 3941 |
| Ksp22I | TGATCA | 1 cut(s) | 3967 |
| LguI | GCTCTTC | 1 cut(s) | 2794 |
| LmnI | GCTCC | 8 cut(s) | 331, 898, 1009, 2002, 2042, 3223, 3755, 4357 |
| Lsp1109I | GCAGC | 8 cut(s) | 756, 1674, 1723, 2212, 3431, 4840, 5047, 5086 |
| MaeI | CTAG | 5 cut(s) | 173, 2427, 2637, 3396, 4832 |
| MaeII | ACGT | 1 cut(s) | 2868 |
| MflI | RGATCY | 3 cut(s) | 88, 2883, 3055 |
| MhlI | GDGCHC | 6 cut(s) | 226, 895, 1243, 1338, 4471, 4700 |
| MlsI | TGGCCA | 1 cut(s) | 4931 |
| MluNI | TGGCCA | 1 cut(s) | 4931 |
| MmeI | TCCRAC | 6 cut(s) | 920, 1079, 2096, 2385, 2493, 2726 |
| Mox20I | TGGCCA | 1 cut(s) | 4931 |
| Mph1103I | ATGCAT | 2 cut(s) | 1941, 3769 |
| MroNI | GCCGGC | 1 cut(s) | 3939 |
| MroXI | GAANNNNTTC | 6 cut(s) | 126, 659, 990, 2464, 2675, 4215 |
| MscI | TGGCCA | 1 cut(s) | 4931 |
| MslI | CAYNNNNRTG | 4 cut(s) | 777, 1331, 1482, 4920 |
| Msp20I | TGGCCA | 1 cut(s) | 4931 |
| MspI | CCGG | 8 cut(s) | 351, 1402, 1990, 3046, 3787, 3817, 3940, 4989 |
| MssI | GTTTAAAC | 1 cut(s) | 4033 |
| Mva1269I | GAATGC | 4 cut(s) | 196, 772, 1232, 1941 |
| MvaI | CCWGG | 6 cut(s) | 68, 450, 816, 1782, 2040, 4850 |
| MvnI | CGCG | 1 cut(s) | 5156 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 230, 752, 1865, 3764, 4825, 5096 |
| NaeI | GCCGGC | 1 cut(s) | 3941 |
| NciI | CCSGG | 5 cut(s) | 351, 1991, 3046, 3788, 3818 |
| NdeI | CATATG | 1 cut(s) | 265 |
| NgoMIV | GCCGGC | 1 cut(s) | 3939 |
| NlaIV | GGNNCC | 7 cut(s) | 65, 333, 810, 1086, 1707, 3012, 3356 |
| NmuCI | GTSAC | 5 cut(s) | 841, 3024, 3092, 3454, 4955 |
| NsiI | ATGCAT | 2 cut(s) | 1941, 3769 |
| NspI | RCATGY | 7 cut(s) | 601, 1796, 3497, 3522, 3771, 4042, 5017 |
| PaeI | GCATGC | 2 cut(s) | 1796, 5017 |
| PagI | TCATGA | 3 cut(s) | 3613, 4392, 4909 |
| PaqCI | CACCTGC | 1 cut(s) | 4432 |
| PceI | AGGCCT | 2 cut(s) | 1105, 4200 |
| PciI | ACATGT | 3 cut(s) | 597, 3493, 4038 |
| PciSI | GCTCTTC | 1 cut(s) | 2794 |
| PctI | GAATGC | 4 cut(s) | 196, 772, 1232, 1941 |
| PdiI | GCCGGC | 1 cut(s) | 3941 |
| PdmI | GAANNNNTTC | 6 cut(s) | 126, 659, 990, 2464, 2675, 4215 |
| PflFI | GACNNNGTC | 1 cut(s) | 2112 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1094, 2745 |
| PfoI | TCCNGGA | 2 cut(s) | 1989, 2038 |
| PkrI | GCNGC | 8 cut(s) | 771, 1689, 1738, 2227, 3421, 4830, 5062, 5101 |
| PmeI | GTTTAAAC | 1 cut(s) | 4033 |
| PpuMI | RGGWCCY | 1 cut(s) | 809 |
| PscI | ACATGT | 3 cut(s) | 597, 3493, 4038 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2693 |
| PsiI | TTATAA | 2 cut(s) | 2069, 2342 |
| Psp5II | RGGWCCY | 1 cut(s) | 809 |
| Psp6I | CCWGG | 6 cut(s) | 66, 448, 814, 1780, 2038, 4848 |
| PspEI | GGTNACC | 1 cut(s) | 3024 |
| PspGI | CCWGG | 6 cut(s) | 66, 448, 814, 1780, 2038, 4848 |
| PspN4I | GGNNCC | 7 cut(s) | 65, 333, 810, 1086, 1707, 3012, 3356 |
| PspPI | GGNCC | 8 cut(s) | 63, 809, 1085, 2054, 2108, 2497, 3814, 4534 |
| PspPPI | RGGWCCY | 1 cut(s) | 809 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 2849, 2881, 4617, 4649 |
| PstI | CTGCAG | 1 cut(s) | 3421 |
| PstNI | CAGNNNCTG | 3 cut(s) | 3305, 3425, 5096 |
| PsuI | RGATCY | 3 cut(s) | 88, 2883, 3055 |
| PsyI | GACNNNGTC | 1 cut(s) | 2112 |
| RsaI | GTAC | 8 cut(s) | 820, 1342, 2168, 2355, 2649, 2828, 4240, 4562 |
| RsaNI | GTAC | 8 cut(s) | 819, 1341, 2167, 2354, 2648, 2827, 4239, 4561 |
| RseI | CAYNNNNRTG | 4 cut(s) | 777, 1331, 1482, 4920 |
| SapI | GCTCTTC | 1 cut(s) | 2794 |
| SatI | GCNGC | 8 cut(s) | 770, 1688, 1737, 2226, 3420, 4829, 5061, 5100 |
| Sau96I | GGNCC | 8 cut(s) | 63, 809, 1085, 2054, 2108, 2497, 3814, 4534 |
| SduI | GDGCHC | 6 cut(s) | 226, 895, 1243, 1338, 4471, 4700 |
| SfcI | CTRYAG | 4 cut(s) | 863, 2901, 3417, 3759 |
| SinI | GGWCC | 5 cut(s) | 63, 809, 2054, 2108, 2497 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 777, 1331, 1482, 4920 |
| SmlI | CTYRAG | 6 cut(s) | 1133, 1242, 1434, 2229, 3944, 4538 |
| SmoI | CTYRAG | 6 cut(s) | 1133, 1242, 1434, 2229, 3944, 4538 |
| SphI | GCATGC | 2 cut(s) | 1796, 5017 |
| SseBI | AGGCCT | 2 cut(s) | 1105, 4200 |
| SsiI | CCGC | 5 cut(s) | 2158, 2929, 3525, 3937, 5011 |
| SspI | AATATT | 3 cut(s) | 1606, 1659, 5070 |
| SspMI | CTAG | 5 cut(s) | 173, 2427, 2637, 3396, 4832 |
| StuI | AGGCCT | 2 cut(s) | 1105, 4200 |
| StyI | CCWWGG | 2 cut(s) | 1088, 2556 |
| TaiI | ACGT | 1 cut(s) | 2871 |
| TaqI | TCGA | 7 cut(s) | 519, 2518, 3906, 4471, 4638, 4732, 4778 |
| TaqII | GACCGA | 1 cut(s) | 2125 |
| TatI | WGTACW | 4 cut(s) | 1340, 2166, 2826, 4560 |
| TseFI | GTSAC | 5 cut(s) | 841, 3024, 3092, 3454, 4955 |
| TseI | GCWGC | 8 cut(s) | 769, 1687, 1736, 2225, 3419, 4828, 5060, 5099 |
| Tsp45I | GTSAC | 5 cut(s) | 841, 3024, 3092, 3454, 4955 |
| TspGWI | ACGGA | 4 cut(s) | 557, 1108, 2687, 4226 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2112 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1094, 2745 |
| VpaK11BI | GGWCC | 5 cut(s) | 63, 809, 2054, 2108, 2497 |
| XceI | RCATGY | 7 cut(s) | 601, 1796, 3497, 3522, 3771, 4042, 5017 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1095 |
| XmiI | GTMKAC | 1 cut(s) | 1371 |
| XmnI | GAANNNNTTC | 6 cut(s) | 126, 659, 990, 2464, 2675, 4215 |
| XspI | CTAG | 5 cut(s) | 173, 2427, 2637, 3396, 4832 |
| Zsp2I | ATGCAT | 2 cut(s) | 1941, 3769 |