TPR and ankyrin repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1239 |
| AciI | CCGC | 2 cut(s) | 797, 1666 |
| AclWI | GGATC | 1 cut(s) | 1049 |
| AcsI | RAATTY | 4 cut(s) | 811, 860, 1075, 1643 |
| AcuI | CTGAAG | 1 cut(s) | 369 |
| AfaI | GTAC | 8 cut(s) | 21, 548, 1153, 1159, 1174, 1379, 1593, 1929 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 370, 769, 1059, 1662 |
| AflII | CTTAAG | 1 cut(s) | 1658 |
| AhlI | ACTAGT | 1 cut(s) | 388 |
| AjnI | CCWGG | 4 cut(s) | 1165, 1276, 1380, 1876 |
| Alw26I | GTCTC | 3 cut(s) | 119, 220, 628 |
| AlwI | GGATC | 1 cut(s) | 1049 |
| Ama87I | CYCGRG | 1 cut(s) | 1058 |
| AoxI | GGCC | 3 cut(s) | 59, 833, 1809 |
| ApeKI | GCWGC | 2 cut(s) | 48, 653 |
| ApoI | RAATTY | 4 cut(s) | 811, 860, 1075, 1643 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 92, 124 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1632 |
| AspS9I | GGNCC | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 3 cut(s) | 257, 1266, 1336 |
| AvaI | CYCGRG | 1 cut(s) | 1058 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1383, 1416 |
| BanII | GRGCYC | 1 cut(s) | 775 |
| BauI | CACGAG | 2 cut(s) | 428, 1529 |
| BbsI | GAAGAC | 4 cut(s) | 357, 1269, 1298, 1517 |
| BbvI | GCAGC | 2 cut(s) | 60, 640 |
| BccI | CCATC | 3 cut(s) | 386, 1414, 1799 |
| BciT130I | CCWGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| BclI | TGATCA | 1 cut(s) | 324 |
| BcoDI | GTCTC | 3 cut(s) | 119, 220, 628 |
| BcuI | ACTAGT | 1 cut(s) | 388 |
| BfaI | CTAG | 4 cut(s) | 389, 443, 1188, 1749 |
| BfmI | CTRYAG | 3 cut(s) | 687, 854, 1410 |
| BfrI | CTTAAG | 1 cut(s) | 1658 |
| BisI | GCNGC | 2 cut(s) | 49, 654 |
| BlsI | GCNGC | 2 cut(s) | 50, 655 |
| BmcAI | AGTACT | 1 cut(s) | 1159 |
| Bme1390I | CCNGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| BmeT110I | CYCGRG | 1 cut(s) | 1058 |
| BmgT120I | GGNCC | 1 cut(s) | 60 |
| BmrFI | CCNGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| BmsI | GCATC | 6 cut(s) | 437, 556, 949, 1428, 1777, 1939 |
| BpiI | GAAGAC | 4 cut(s) | 357, 1269, 1298, 1517 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 757, 789 |
| BpmI | CTGGAG | 2 cut(s) | 1270, 1923 |
| BpuEI | CTTGAG | 2 cut(s) | 822, 1703 |
| Bsa29I | ATCGAT | 1 cut(s) | 1947 |
| BsaI | GGTCTC | 1 cut(s) | 628 |
| BsaJI | CCNNGG | 4 cut(s) | 846, 1124, 1637, 1821 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 370, 769, 1059, 1662 |
| Bse1I | ACTGG | 2 cut(s) | 1176, 1253 |
| Bse3DI | GCAATG | 1 cut(s) | 1053 |
| BseBI | CCWGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| BseCI | ATCGAT | 1 cut(s) | 1947 |
| BseDI | CCNNGG | 4 cut(s) | 846, 1124, 1637, 1821 |
| BseGI | GGATG | 5 cut(s) | 452, 1390, 1419, 1594, 1831 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 370, 769, 1059, 1662 |
| BseMI | GCAATG | 1 cut(s) | 1053 |
| BseMII | CTCAG | 4 cut(s) | 147, 236, 671, 961 |
| BseNI | ACTGG | 2 cut(s) | 1176, 1253 |
| BseRI | GAGGAG | 1 cut(s) | 1684 |
| BseXI | GCAGC | 2 cut(s) | 60, 640 |
| BseYI | CCCAGC | 1 cut(s) | 1606 |
| BshFI | GGCC | 3 cut(s) | 61, 835, 1811 |
| BshVI | ATCGAT | 1 cut(s) | 1947 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1058 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 370, 769, 1059, 1662 |
| BsmAI | GTCTC | 3 cut(s) | 119, 220, 628 |
| BsmI | GAATGC | 2 cut(s) | 343, 1457 |
| BsnI | GGCC | 3 cut(s) | 61, 835, 1811 |
| Bso31I | GGTCTC | 1 cut(s) | 628 |
| BsoBI | CYCGRG | 1 cut(s) | 1058 |
| Bsp1286I | GDGCHC | 1 cut(s) | 775 |
| Bsp143I | GATC | 2 cut(s) | 324, 1041 |
| Bsp19I | CCATGG | 2 cut(s) | 1124, 1637 |
| BspACI | CCGC | 2 cut(s) | 797, 1666 |
| BspANI | GGCC | 3 cut(s) | 61, 835, 1811 |
| BspCNI | CTCAG | 4 cut(s) | 148, 235, 670, 960 |
| BspDI | ATCGAT | 1 cut(s) | 1947 |
| BspMAI | CTGCAG | 1 cut(s) | 858 |
| BspPI | GGATC | 1 cut(s) | 1049 |
| BspQI | GCTCTTC | 1 cut(s) | 1952 |
| BspTI | CTTAAG | 1 cut(s) | 1658 |
| BspTNI | GGTCTC | 1 cut(s) | 628 |
| BsrDI | GCAATG | 1 cut(s) | 1053 |
| BsrI | ACTGG | 2 cut(s) | 1176, 1253 |
| BssECI | CCNNGG | 4 cut(s) | 846, 1124, 1637, 1821 |
| BssMI | GATC | 2 cut(s) | 324, 1041 |
| BssSI | CACGAG | 2 cut(s) | 428, 1529 |
| BssT1I | CCWWGG | 4 cut(s) | 846, 1124, 1637, 1821 |
| Bst2BI | CACGAG | 2 cut(s) | 428, 1529 |
| Bst2UI | CCWGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| Bst4CI | ACNGT | 1 cut(s) | 1151 |
| Bst6I | CTCTTC | 2 cut(s) | 563, 1952 |
| BstAFI | CTTAAG | 1 cut(s) | 1658 |
| BstC8I | GCNNGC | 6 cut(s) | 28, 59, 641, 684, 895, 1707 |
| BstDEI | CTNAG | 5 cut(s) | 156, 222, 290, 657, 947 |
| BstDSI | CCRYGG | 2 cut(s) | 1124, 1637 |
| BstEII | GGTNACC | 1 cut(s) | 1444 |
| BstF5I | GGATG | 5 cut(s) | 452, 1390, 1419, 1594, 1831 |
| BstKTI | GATC | 2 cut(s) | 327, 1044 |
| BstMAI | GTCTC | 3 cut(s) | 119, 220, 628 |
| BstMBI | GATC | 2 cut(s) | 324, 1041 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 54, 718, 1558 |
| BstNI | CCWGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| BstNSI | RCATGY | 2 cut(s) | 8, 901 |
| BstPI | GGTNACC | 1 cut(s) | 1444 |
| BstSCI | CCNGG | 4 cut(s) | 1165, 1276, 1380, 1876 |
| BstSFI | CTRYAG | 3 cut(s) | 687, 854, 1410 |
| BstV1I | GCAGC | 2 cut(s) | 60, 640 |
| BstV2I | GAAGAC | 4 cut(s) | 357, 1269, 1298, 1517 |
| Bsu15I | ATCGAT | 1 cut(s) | 1947 |
| BsuRI | GGCC | 3 cut(s) | 61, 835, 1811 |
| BsuTUI | ATCGAT | 1 cut(s) | 1947 |
| BtgI | CCRYGG | 2 cut(s) | 1124, 1637 |
| BtsCI | GGATG | 5 cut(s) | 452, 1390, 1419, 1594, 1831 |
| BtsI | GCAGTG | 2 cut(s) | 201, 851 |
| BtsIMutI | CAGTG | 8 cut(s) | 153, 201, 334, 851, 1147, 1183, 1362, 1623 |
| Cac8I | GCNNGC | 6 cut(s) | 28, 59, 641, 684, 895, 1707 |
| Cfr13I | GGNCC | 1 cut(s) | 60 |
| ClaI | ATCGAT | 1 cut(s) | 1947 |
| CseI | GACGC | 1 cut(s) | 1292 |
| CsiI | ACCWGGT | 2 cut(s) | 1276, 1876 |
| Csp6I | GTAC | 8 cut(s) | 20, 547, 1152, 1158, 1173, 1378, 1592, 1928 |
| CviQI | GTAC | 8 cut(s) | 20, 547, 1152, 1158, 1173, 1378, 1592, 1928 |
| DdeI | CTNAG | 5 cut(s) | 156, 222, 290, 657, 947 |
| DpnI | GATC | 2 cut(s) | 326, 1043 |
| DpnII | GATC | 2 cut(s) | 324, 1041 |
| Eam1104I | CTCTTC | 2 cut(s) | 563, 1952 |
| EarI | CTCTTC | 2 cut(s) | 563, 1952 |
| EciI | GGCGGA | 1 cut(s) | 1681 |
| Eco130I | CCWWGG | 4 cut(s) | 846, 1124, 1637, 1821 |
| Eco147I | AGGCCT | 1 cut(s) | 835 |
| Eco24I | GRGCYC | 1 cut(s) | 775 |
| Eco31I | GGTCTC | 1 cut(s) | 628 |
| Eco32I | GATATC | 2 cut(s) | 360, 1945 |
| Eco57I | CTGAAG | 1 cut(s) | 369 |
| Eco88I | CYCGRG | 1 cut(s) | 1058 |
| Eco91I | GGTNACC | 1 cut(s) | 1444 |
| EcoO65I | GGTNACC | 1 cut(s) | 1444 |
| EcoRI | GAATTC | 1 cut(s) | 811 |
| EcoRII | CCWGG | 4 cut(s) | 1165, 1276, 1380, 1876 |
| EcoRV | GATATC | 2 cut(s) | 360, 1945 |
| EcoT14I | CCWWGG | 4 cut(s) | 846, 1124, 1637, 1821 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 775 |
| ErhI | CCWWGG | 4 cut(s) | 846, 1124, 1637, 1821 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1407, 1439 |
| FbaI | TGATCA | 1 cut(s) | 324 |
| Fnu4HI | GCNGC | 2 cut(s) | 49, 654 |
| FokI | GGATG | 5 cut(s) | 459, 1397, 1406, 1601, 1838 |
| FriOI | GRGCYC | 1 cut(s) | 775 |
| Fsp4HI | GCNGC | 2 cut(s) | 49, 654 |
| FspBI | CTAG | 4 cut(s) | 389, 443, 1188, 1749 |
| GluI | GCNGC | 2 cut(s) | 49, 654 |
| GsaI | CCCAGC | 1 cut(s) | 1610 |
| GsuI | CTGGAG | 2 cut(s) | 1270, 1923 |
| HaeIII | GGCC | 3 cut(s) | 61, 835, 1811 |
| HgaI | GACGC | 1 cut(s) | 1292 |
| HincII | GTYRAC | 1 cut(s) | 1801 |
| HindII | GTYRAC | 1 cut(s) | 1801 |
| HindIII | AAGCTT | 2 cut(s) | 710, 1094 |
| HinfI | GANTC | 8 cut(s) | 275, 367, 383, 538, 749, 979, 1112, 1726 |
| HphI | GGTGA | 3 cut(s) | 257, 1266, 1336 |
| Hpy166II | GTNNAC | 7 cut(s) | 394, 475, 547, 589, 1570, 1801, 1928 |
| Hpy188III | TCNNGA | 7 cut(s) | 400, 430, 739, 763, 808, 839, 1720 |
| Hpy8I | GTNNAC | 7 cut(s) | 394, 475, 547, 589, 1570, 1801, 1928 |
| HpyAV | CCTTC | 9 cut(s) | 208, 406, 790, 1032, 1123, 1409, 1433, 1605, 1801 |
| HpyCH4III | ACNGT | 1 cut(s) | 1151 |
| HpyCH4IV | ACGT | 1 cut(s) | 549 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 54, 718, 1558 |
| HpyF3I | CTNAG | 5 cut(s) | 156, 222, 290, 657, 947 |
| HpySE526I | ACGT | 1 cut(s) | 549 |
| Ksp22I | TGATCA | 1 cut(s) | 324 |
| Kzo9I | GATC | 2 cut(s) | 324, 1041 |
| LguI | GCTCTTC | 1 cut(s) | 1952 |
| LmnI | GCTCC | 2 cut(s) | 1300, 1614 |
| Lsp1109I | GCAGC | 2 cut(s) | 60, 640 |
| LweI | GCATC | 6 cut(s) | 437, 556, 949, 1428, 1777, 1939 |
| MabI | ACCWGGT | 2 cut(s) | 1276, 1876 |
| MaeI | CTAG | 4 cut(s) | 389, 443, 1188, 1749 |
| MaeII | ACGT | 1 cut(s) | 549 |
| MaeIII | GTNAC | 3 cut(s) | 865, 1444, 1460 |
| MalI | GATC | 2 cut(s) | 326, 1043 |
| MboI | GATC | 2 cut(s) | 324, 1041 |
| MhlI | GDGCHC | 1 cut(s) | 775 |
| MlyI | GAGTC | 1 cut(s) | 1106 |
| MmeI | TCCRAC | 1 cut(s) | 1089 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1632 |
| MseI | TTAA | 4 cut(s) | 468, 696, 1488, 1659 |
| MspA1I | CMGCKG | 1 cut(s) | 653 |
| MspCI | CTTAAG | 1 cut(s) | 1658 |
| MspR9I | CCNGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| Mva1269I | GAATGC | 2 cut(s) | 343, 1457 |
| MvaI | CCWGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 54, 718, 1558 |
| NcoI | CCATGG | 2 cut(s) | 1124, 1637 |
| NdeII | GATC | 2 cut(s) | 324, 1041 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 2 cut(s) | 8, 901 |
| PceI | AGGCCT | 1 cut(s) | 835 |
| PciSI | GCTCTTC | 1 cut(s) | 1952 |
| PctI | GAATGC | 2 cut(s) | 343, 1457 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1632 |
| PfeI | GAWTC | 7 cut(s) | 275, 367, 383, 538, 749, 979, 1726 |
| PkrI | GCNGC | 2 cut(s) | 50, 655 |
| PleI | GAGTC | 1 cut(s) | 1106 |
| PpsI | GAGTC | 1 cut(s) | 1106 |
| PsiI | TTATAA | 1 cut(s) | 1239 |
| Psp6I | CCWGG | 4 cut(s) | 1165, 1276, 1380, 1876 |
| PspEI | GGTNACC | 1 cut(s) | 1444 |
| PspFI | CCCAGC | 1 cut(s) | 1606 |
| PspGI | CCWGG | 4 cut(s) | 1165, 1276, 1380, 1876 |
| PspPI | GGNCC | 1 cut(s) | 60 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 727, 759 |
| PstI | CTGCAG | 1 cut(s) | 858 |
| PvuII | CAGCTG | 1 cut(s) | 653 |
| RsaI | GTAC | 8 cut(s) | 21, 548, 1153, 1159, 1174, 1379, 1593, 1929 |
| RsaNI | GTAC | 8 cut(s) | 20, 547, 1152, 1158, 1173, 1378, 1592, 1928 |
| SapI | GCTCTTC | 1 cut(s) | 1952 |
| SaqAI | TTAA | 4 cut(s) | 468, 696, 1488, 1659 |
| SatI | GCNGC | 2 cut(s) | 49, 654 |
| Sau3AI | GATC | 2 cut(s) | 324, 1041 |
| Sau96I | GGNCC | 1 cut(s) | 60 |
| ScaI | AGTACT | 1 cut(s) | 1159 |
| SchI | GAGTC | 1 cut(s) | 1106 |
| ScrFI | CCNGG | 4 cut(s) | 1167, 1278, 1382, 1878 |
| SduI | GDGCHC | 1 cut(s) | 775 |
| SexAI | ACCWGGT | 2 cut(s) | 1276, 1876 |
| SfaNI | GCATC | 6 cut(s) | 437, 556, 949, 1428, 1777, 1939 |
| SfcI | CTRYAG | 3 cut(s) | 687, 854, 1410 |
| SmlI | CTYRAG | 3 cut(s) | 837, 1658, 1718 |
| SmoI | CTYRAG | 3 cut(s) | 837, 1658, 1718 |
| SpeI | ACTAGT | 1 cut(s) | 388 |
| SseBI | AGGCCT | 1 cut(s) | 835 |
| SsiI | CCGC | 2 cut(s) | 797, 1666 |
| SspI | AATATT | 2 cut(s) | 270, 665 |
| SspMI | CTAG | 4 cut(s) | 389, 443, 1188, 1749 |
| StuI | AGGCCT | 1 cut(s) | 835 |
| StyD4I | CCNGG | 4 cut(s) | 1165, 1276, 1380, 1876 |
| StyI | CCWWGG | 4 cut(s) | 846, 1124, 1637, 1821 |
| TaaI | ACNGT | 1 cut(s) | 1151 |
| TaiI | ACGT | 1 cut(s) | 552 |
| TaqI | TCGA | 4 cut(s) | 381, 1330, 1882, 1947 |
| TatI | WGTACW | 4 cut(s) | 19, 1157, 1591, 1927 |
| TfiI | GAWTC | 7 cut(s) | 275, 367, 383, 538, 749, 979, 1726 |
| Tru1I | TTAA | 4 cut(s) | 468, 696, 1488, 1659 |
| Tru9I | TTAA | 4 cut(s) | 468, 696, 1488, 1659 |
| TscAI | CASTG | 8 cut(s) | 160, 201, 334, 858, 1154, 1183, 1369, 1630 |
| TseI | GCWGC | 2 cut(s) | 48, 653 |
| TspDTI | ATGAA | 6 cut(s) | 80, 227, 551, 772, 1401, 1820 |
| TspRI | CASTG | 8 cut(s) | 160, 201, 334, 858, 1154, 1183, 1369, 1630 |
| Vha464I | CTTAAG | 1 cut(s) | 1658 |
| XapI | RAATTY | 4 cut(s) | 811, 860, 1075, 1643 |
| XceI | RCATGY | 2 cut(s) | 8, 901 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1632 |
| XspI | CTAG | 4 cut(s) | 389, 443, 1188, 1749 |
| ZrmI | AGTACT | 1 cut(s) | 1159 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |