RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G54910 |
| fragaria_vesca | FvH4_4g36230 FvH4_4g36230 FvH4_4g36230 FvH4_5g34980 |
| malus_domestica | MD08G1022200.v1.1 MD13G1010800.v1.1 MD15G1026900.v1.1 |
| prunus_persica | Prupe.1G342200_v2.0.a1 |
| pyrus_communis | pycom08g13590 pycom13g00910 pycom15g02270 pycom15g02280 pycom15g02290 |
| rosa_chinensis | RchiOBHm_Chr1g0336991 RchiOBHm_Chr4g0445981 |
| rosa_laevigata | RLG00000005702 RLG00000029316 |
| rosa_multiflora | Rmu_co8191210.1_g000001 Rmu_sc0000115.1_g000004 Rmu_sc0003001.1_g000004 Rmu_sc0008543.1_g000002 Rmu_sc0009742.1_g000002 Rmu_sc0036469.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00315110 Rroxscaffold_5G00386390 |
| rosa_rugosa | Rorug01G0129500 Rorug01G0130100 Rorug04G0366700 Rorug04G0366700 |
| rosa_samantha | Rh1AG150500 Rh1BG118700 Rh1BG118900 Rh1CG141800 Rh1DG157800 Rh4AG428100 Rh4BG437700 Rh4CG454400 Rh4DG436200 |
| rosa_wichuraiana | Rw1G012290 Rw4G036610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 292, 488 |
| AclWI | GGATC | 1 cut(s) | 185 |
| AcsI | RAATTY | 1 cut(s) | 151 |
| AflII | CTTAAG | 1 cut(s) | 245 |
| AgsI | TTSAA | 5 cut(s) | 81, 97, 215, 337, 543 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 89, 121, 137, 169 |
| AluBI | AGCT | 2 cut(s) | 476, 518 |
| AluI | AGCT | 2 cut(s) | 476, 518 |
| AlwI | GGATC | 1 cut(s) | 185 |
| Ama87I | CYCGRG | 2 cut(s) | 72, 126 |
| AoxI | GGCC | 1 cut(s) | 389 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| ApoI | RAATTY | 1 cut(s) | 151 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 231 |
| AspS9I | GGNCC | 2 cut(s) | 160, 389 |
| AsuHPI | GGTGA | 2 cut(s) | 268, 461 |
| AvaI | CYCGRG | 2 cut(s) | 72, 126 |
| AvaII | GGWCC | 1 cut(s) | 160 |
| BbsI | GAAGAC | 1 cut(s) | 269 |
| BbvI | GCAGC | 1 cut(s) | 166 |
| BccI | CCATC | 3 cut(s) | 200, 400, 440 |
| BfaI | CTAG | 1 cut(s) | 553 |
| BfrI | CTTAAG | 1 cut(s) | 245 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| Bme18I | GGWCC | 1 cut(s) | 160 |
| BmeT110I | CYCGRG | 2 cut(s) | 72, 126 |
| BmgT120I | GGNCC | 2 cut(s) | 160, 389 |
| BmiI | GGNNCC | 1 cut(s) | 162 |
| BmrI | ACTGGG | 1 cut(s) | 180 |
| BmsI | GCATC | 1 cut(s) | 517 |
| BmuI | ACTGGG | 1 cut(s) | 180 |
| BpiI | GAAGAC | 1 cut(s) | 269 |
| BpuEI | CTTGAG | 1 cut(s) | 478 |
| Bsa29I | ATCGAT | 1 cut(s) | 403 |
| Bse1I | ACTGG | 1 cut(s) | 186 |
| BseCI | ATCGAT | 1 cut(s) | 403 |
| BseGI | GGATG | 2 cut(s) | 10, 367 |
| BseMII | CTCAG | 1 cut(s) | 366 |
| BseNI | ACTGG | 1 cut(s) | 186 |
| BseXI | GCAGC | 1 cut(s) | 166 |
| BseYI | CCCAGC | 2 cut(s) | 194, 476 |
| BsgI | GTGCAG | 1 cut(s) | 41 |
| Bsh1285I | CGRYCG | 1 cut(s) | 407 |
| BshFI | GGCC | 1 cut(s) | 391 |
| BshVI | ATCGAT | 1 cut(s) | 403 |
| BsiEI | CGRYCG | 1 cut(s) | 407 |
| BsiHKCI | CYCGRG | 2 cut(s) | 72, 126 |
| BsmI | GAATGC | 1 cut(s) | 198 |
| BsnI | GGCC | 1 cut(s) | 391 |
| BsoBI | CYCGRG | 2 cut(s) | 72, 126 |
| Bsp143I | GATC | 4 cut(s) | 27, 99, 190, 404 |
| BspACI | CCGC | 2 cut(s) | 292, 488 |
| BspANI | GGCC | 1 cut(s) | 391 |
| BspCNI | CTCAG | 1 cut(s) | 367 |
| BspDI | ATCGAT | 1 cut(s) | 403 |
| BspLI | GGNNCC | 1 cut(s) | 162 |
| BspPI | GGATC | 1 cut(s) | 185 |
| BspTI | CTTAAG | 1 cut(s) | 245 |
| BsrI | ACTGG | 1 cut(s) | 186 |
| BssMI | GATC | 4 cut(s) | 27, 99, 190, 404 |
| Bst4CI | ACNGT | 1 cut(s) | 534 |
| Bst6I | CTCTTC | 4 cut(s) | 246, 332, 351, 453 |
| BstAFI | CTTAAG | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 2 cut(s) | 296, 516 |
| BstDEI | CTNAG | 1 cut(s) | 375 |
| BstF5I | GGATG | 2 cut(s) | 10, 367 |
| BstKTI | GATC | 4 cut(s) | 30, 102, 193, 407 |
| BstMBI | GATC | 4 cut(s) | 27, 99, 190, 404 |
| BstMCI | CGRYCG | 1 cut(s) | 407 |
| BstV1I | GCAGC | 1 cut(s) | 166 |
| BstV2I | GAAGAC | 1 cut(s) | 269 |
| Bsu15I | ATCGAT | 1 cut(s) | 403 |
| BsuRI | GGCC | 1 cut(s) | 391 |
| BsuTUI | ATCGAT | 1 cut(s) | 403 |
| BtsCI | GGATG | 2 cut(s) | 10, 367 |
| BtsIMutI | CAGTG | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 2 cut(s) | 296, 516 |
| Cfr13I | GGNCC | 2 cut(s) | 160, 389 |
| ClaI | ATCGAT | 1 cut(s) | 403 |
| CseI | GACGC | 1 cut(s) | 287 |
| CviJI | RGCY | 6 cut(s) | 179, 244, 391, 476, 518, 524 |
| CviKI_1 | RGCY | 6 cut(s) | 179, 244, 391, 476, 518, 524 |
| DdeI | CTNAG | 1 cut(s) | 375 |
| DpnI | GATC | 4 cut(s) | 29, 101, 192, 406 |
| DpnII | GATC | 4 cut(s) | 27, 99, 190, 404 |
| Eam1104I | CTCTTC | 4 cut(s) | 246, 332, 351, 453 |
| EarI | CTCTTC | 4 cut(s) | 246, 332, 351, 453 |
| Eco47I | GGWCC | 1 cut(s) | 160 |
| Eco88I | CYCGRG | 2 cut(s) | 72, 126 |
| EcoT22I | ATGCAT | 1 cut(s) | 10 |
| FaiI | YATR | 4 cut(s) | 237, 427, 501, 503 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 89, 121, 413, 445 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| FokI | GGATG | 2 cut(s) | 17, 374 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| FspBI | CTAG | 1 cut(s) | 553 |
| GluI | GCNGC | 1 cut(s) | 180 |
| GsaI | CCCAGC | 2 cut(s) | 198, 480 |
| HaeIII | GGCC | 1 cut(s) | 391 |
| HgaI | GACGC | 1 cut(s) | 287 |
| HindIII | AAGCTT | 1 cut(s) | 516 |
| HinfI | GANTC | 4 cut(s) | 23, 377, 491, 539 |
| HphI | GGTGA | 2 cut(s) | 268, 461 |
| Hpy166II | GTNNAC | 1 cut(s) | 160 |
| Hpy188I | TCNGA | 3 cut(s) | 376, 382, 397 |
| Hpy188III | TCNNGA | 2 cut(s) | 203, 215 |
| Hpy8I | GTNNAC | 1 cut(s) | 160 |
| Hpy99I | CGWCG | 1 cut(s) | 303 |
| HpyAV | CCTTC | 4 cut(s) | 165, 313, 380, 460 |
| HpyCH4III | ACNGT | 1 cut(s) | 534 |
| HpyCH4IV | ACGT | 1 cut(s) | 369 |
| HpyCH4V | TGCA | 4 cut(s) | 8, 58, 350, 547 |
| HpyF3I | CTNAG | 1 cut(s) | 375 |
| HpySE526I | ACGT | 1 cut(s) | 369 |
| Kzo9I | GATC | 4 cut(s) | 27, 99, 190, 404 |
| LmnI | GCTCC | 1 cut(s) | 187 |
| LpnPI | CCDG | 4 cut(s) | 199, 208, 308, 462 |
| Lsp1109I | GCAGC | 1 cut(s) | 166 |
| LweI | GCATC | 1 cut(s) | 517 |
| MaeI | CTAG | 1 cut(s) | 553 |
| MaeII | ACGT | 1 cut(s) | 369 |
| MalI | GATC | 4 cut(s) | 29, 101, 192, 406 |
| MboI | GATC | 4 cut(s) | 27, 99, 190, 404 |
| MluCI | AATT | 3 cut(s) | 39, 151, 230 |
| MlyI | GAGTC | 2 cut(s) | 386, 485 |
| MnlI | CCTC | 3 cut(s) | 234, 247, 352 |
| Mph1103I | ATGCAT | 1 cut(s) | 10 |
| MroXI | GAANNNNTTC | 1 cut(s) | 231 |
| MseI | TTAA | 2 cut(s) | 38, 246 |
| MspCI | CTTAAG | 1 cut(s) | 245 |
| Mva1269I | GAATGC | 1 cut(s) | 198 |
| NdeII | GATC | 4 cut(s) | 27, 99, 190, 404 |
| NlaIV | GGNNCC | 1 cut(s) | 162 |
| NsiI | ATGCAT | 1 cut(s) | 10 |
| PctI | GAATGC | 1 cut(s) | 198 |
| PdmI | GAANNNNTTC | 1 cut(s) | 231 |
| PfeI | GAWTC | 2 cut(s) | 23, 539 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| Ple19I | CGATCG | 1 cut(s) | 407 |
| PleI | GAGTC | 2 cut(s) | 385, 485 |
| PpsI | GAGTC | 2 cut(s) | 385, 485 |
| PspFI | CCCAGC | 2 cut(s) | 194, 476 |
| PspN4I | GGNNCC | 1 cut(s) | 162 |
| PspPI | GGNCC | 2 cut(s) | 160, 389 |
| PvuI | CGATCG | 1 cut(s) | 407 |
| SaqAI | TTAA | 2 cut(s) | 38, 246 |
| SatI | GCNGC | 1 cut(s) | 180 |
| Sau3AI | GATC | 4 cut(s) | 27, 99, 190, 404 |
| Sau96I | GGNCC | 2 cut(s) | 160, 389 |
| SchI | GAGTC | 2 cut(s) | 386, 485 |
| SetI | ASST | 7 cut(s) | 118, 176, 258, 372, 419, 478, 520 |
| SfaNI | GCATC | 1 cut(s) | 517 |
| SinI | GGWCC | 1 cut(s) | 160 |
| SmlI | CTYRAG | 2 cut(s) | 245, 493 |
| SmoI | CTYRAG | 2 cut(s) | 245, 493 |
| Sse9I | AATT | 3 cut(s) | 39, 151, 230 |
| SsiI | CCGC | 2 cut(s) | 292, 488 |
| SspMI | CTAG | 1 cut(s) | 553 |
| TaaI | ACNGT | 1 cut(s) | 534 |
| TaiI | ACGT | 1 cut(s) | 372 |
| TaqI | TCGA | 2 cut(s) | 26, 403 |
| TasI | AATT | 3 cut(s) | 39, 151, 230 |
| TfiI | GAWTC | 2 cut(s) | 23, 539 |
| Tru1I | TTAA | 2 cut(s) | 38, 246 |
| Tru9I | TTAA | 2 cut(s) | 38, 246 |
| TscAI | CASTG | 1 cut(s) | 193 |
| TseI | GCWGC | 1 cut(s) | 179 |
| TspDTI | ATGAA | 4 cut(s) | 32, 224, 332, 344 |
| TspGWI | ACGGA | 1 cut(s) | 162 |
| TspRI | CASTG | 1 cut(s) | 193 |
| Vha464I | CTTAAG | 1 cut(s) | 245 |
| VpaK11BI | GGWCC | 1 cut(s) | 160 |
| XapI | RAATTY | 1 cut(s) | 151 |
| XmnI | GAANNNNTTC | 1 cut(s) | 231 |
| XspI | CTAG | 1 cut(s) | 553 |
| Zsp2I | ATGCAT | 1 cut(s) | 10 |