Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002471

Physical Location & Seq

Genomic Coordinates Forward (+)

32134964 .. 32139453

Gene Structure 4490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G342200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGAGAAAACCCATATCAAAGACCTCCCGCAAGCAAAAGGAACTTTCGGAGCTCCAAGAAATCGAGCTTCTGAAATCATGGATTGAATCCCAGCAACCCGAATGTGGCTCCAATCCCATGTCTCTTCCTCCTCTGCCCTCCGACGCCCCCGTCGGCCGCATGGGCCCCACAATCTTGTCGCGCTACGCCGGCGCCACCAGGTTCGACCAGTTGCCCATCTCTAAGAAGACCAAGGACGCCTTACGCCAATCCAAGTACATCGAAATGACCGATATTCAGAAGGCGTCTTTGCCCCACGCTCTATGTGGCAGAGATATTCTTGGTGCCGCCAAGACGGGCTCGGGAAAGACTCTGGCTTTTGTTATACCGCTTGTGGAAAAATTGTATAGAGAGAGATGGTGTCCTCAGGATGGGGTAGGCAGCATCATATTATCTCCAACAAGGGAAATAGCTAGTCAAACTTTTGATGTGTTAAAAGCGGTTGGGAAGCACCATAATTTTAGTGCTGGCCTCCTAATTGGTGGTCGCAGAGATGTTGAAGCAGAGAAGGAGCGTGTAAATGAGCTGAACATACTGGTTTGCACTCCTGGCCGGCTTCTTCAGCACATGGATGAAACTCCAAATTTTGATTGTTCACAGCTTCAGGTTTTGGTCCTTGATGAGGCAGACCGTTGTCTTGATTCAGGATTTGAGGCGACACTGAATGCAATCATTTCACAGCTACCCAACAGAAGACAAACCTTTCTGTTCTCAGCAACTCAAACAAAGTCAGTTCAACATCTTGCAAGACTCAGTTTGAAGGATCCAGAGTATCTCAGTGTGCATGAGAAGTCTGTGACAGCCACTCCTAAGAATTTGCAGCAAATGGCAATCATCGTTCCTCTTGACCAAAAGTTAGACCTGCTGTGGAGCTTCGTAAAGACACACCTAAATTCTAGGATTTTAGTGTTTCTATCAACCCGAAAACAGGTAAAATTTGTCTTTGAAGCATTTAAAAAGCTCCGTCCTGGAACACCCTTGAAGTGTCTTCATGGTAAGATGAAGCAAGAGGGACGAATGGGAACATACTCACAGTTTACTGAAAAGCATTCAGTTCTCTTCTCGACTGATGTGGCTTCAAGAGGCCTTGATTTCAACAAGGCAGTTGACTGGGTTGTTCAGGTGGATTGTCCAGAAGATGTTGCATCTTACATACATAGAGTTGGCCGAACTGCTCGCTATGATTCTTCTGGGCGATCAGTTTTATTCCTGACGCCTTCAGAAGAAAAAATGCTTGATAAATTACAAGCAGCAAAAATACCCATAAAGAAATTAAAGCATAACGAGGGACGAATGCAACCGGTGTCTGGGTTGTTAGCAGCTTTGCTAGTCAAGTACCCGGATACGCTTCAGGGTCTGGCTAAAAGGGCCTTTATCACGTATCTGAAGTCGGTTCACAATCAGAAGGACAAAGAGATTTTTGATGTTATGAAACTACCAATTGATGAATTTTCAGCATCAATAGGTCTACCAATGACCCCCAAAATCCGTTTTTTAAACACGAAAATCAAGTCAAAGAAAGTGTCCAAACTATCTCCCATTGTTGAACCAGAAATTTTGGACAAGGAGAATGAATTGGAGCTTCCTAAAGAGGAGCTTGATATTGGTGATTTTAAGGAAGAGGGGGAGAAAGATGCTCTTCTAACAAATGATAGAGAAAATGAGGCAGAGGAGGAAGGAAGAAAAATTGGAGATCTTATACCGGCAACTCGGATTTCGAAGAAAAAGAAGTTAAAGATCAATATCAATAGGCCAGTGGGAACTAGAGTCGTCTTTGACGAGGAAGGCAACACGCTACCGCCACTAGCGAAGCTGGCTGACACAAAAAATGTCAGTGGCCTGCTTGATCAGATTGAAGACAAGAAAACCGAATATTATAAGAAGCTTAGAGAAGATTTGAAGAAGGTGGACAAGGAAGACAAGGATTTGGACCGCCAGCGTCGTCGTGAAAAGCGAATGAAGGATAAGATGAAGCAGAAGAGAGGAAATATAGAAGAAGAGGAGGATGATGATCTTTCTGATTCAGAAGGAGAGCCATCTGAGGATCGACCCCACAAGAGGTCAAAGATATACTTTGATAGTGATGATGAGGGTGAGAGAGAAGAAAGTAAGGATAAACTGGGGTTCAAGCCTGACTCAGTATCTTTAGCGGAACAAGAAGCTTTGGCTCTCAAATTGTTAAGTTCCATGCACTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

746

Amino Acids

84.41

Weight (kDa)

8.77

Isoelectric Point (pI)

49.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54910
fragaria_vesca	FvH4_4g36230 FvH4_4g36230 FvH4_4g36230 FvH4_5g34980
malus_domestica	MD08G1022200.v1.1 MD13G1010800.v1.1 MD15G1026900.v1.1
prunus_persica	Prupe.1G342200_v2.0.a1
pyrus_communis	pycom08g13590 pycom13g00910 pycom15g02270 pycom15g02280 pycom15g02290
rosa_chinensis	RchiOBHm_Chr1g0336991 RchiOBHm_Chr4g0445981
rosa_laevigata	RLG00000005702 RLG00000029316
rosa_multiflora	Rmu_co8191210.1_g000001 Rmu_sc0000115.1_g000004 Rmu_sc0003001.1_g000004 Rmu_sc0008543.1_g000002 Rmu_sc0009742.1_g000002 Rmu_sc0036469.1_g000003
rosa_roxburghii	Rroxscaffold_4G00315110 Rroxscaffold_5G00386390
rosa_rugosa	Rorug01G0129500 Rorug01G0130100 Rorug04G0366700 Rorug04G0366700
rosa_samantha	Rh1AG150500 Rh1BG118700 Rh1BG118900 Rh1CG141800 Rh1DG157800 Rh4AG428100 Rh4BG437700 Rh4CG454400 Rh4DG436200
rosa_wichuraiana	Rw1G012290 Rw4G036610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1917
AasI	GACNNNNNNGTC	1 cut(s)	149
Acc36I	ACCTGC	1 cut(s)	909
AccB1I	GGYRCC	2 cut(s)	191, 323
AccI	GTMKAC	1 cut(s)	1507
AccII	CGCG	1 cut(s)	181
AciI	CCGC	8 cut(s)	28, 157, 327, 368, 479, 1838, 1972, 2189
AclWI	GGATC	3 cut(s)	797, 810, 2091
AcoI	YGGCCR	3 cut(s)	154, 589, 1204
AcsI	RAATTY	6 cut(s)	622, 853, 931, 974, 1487, 1593
AcuI	CTGAAG	5 cut(s)	584, 626, 1242, 1373, 1445
AcyI	GRCGYC	5 cut(s)	144, 192, 237, 284, 1253
AfaI	GTAC	2 cut(s)	257, 1376
AfiI	CCNNNNNNNGG	6 cut(s)	104, 410, 661, 967, 1346, 2097
AgeI	ACCGGT	1 cut(s)	1339
AjnI	CCWGG	3 cut(s)	197, 586, 1006
Alw21I	GWGCWC	1 cut(s)	54
Alw26I	GTCTC	1 cut(s)	126
AlwI	GGATC	3 cut(s)	797, 810, 2091
AlwNI	CAGNNNCTG	1 cut(s)	1396
Ama87I	CYCGRG	1 cut(s)	340
AoxI	GGCC	9 cut(s)	154, 163, 508, 589, 1123, 1204, 1407, 1790, 1876
ApaI	GGGCCC	1 cut(s)	167
ApeKI	GCWGC	4 cut(s)	420, 859, 1289, 1358
ApoI	RAATTY	6 cut(s)	622, 853, 931, 974, 1487, 1593
ArsI	GACNNNNNNTTYG	4 cut(s)	1535, 1547, 1567, 1579
AsiGI	ACCGGT	1 cut(s)	1339
AspLEI	GCGC	2 cut(s)	183, 194
AspS9I	GGNCC	5 cut(s)	163, 164, 652, 1407, 1969
AsuC2I	CCSGG	1 cut(s)	1379
AsuHPI	GGTGA	2 cut(s)	1658, 2144
AsuII	TTCGAA	1 cut(s)	1757
AvaI	CYCGRG	1 cut(s)	340
AvaII	GGWCC	2 cut(s)	652, 1969
AxyI	CCTNAGG	1 cut(s)	405
BaeGI	GKGCMC	1 cut(s)	167
BamHI	GGATCC	1 cut(s)	802
BanI	GGYRCC	2 cut(s)	191, 323
BanII	GRGCYC	3 cut(s)	54, 167, 341
BbsI	GAAGAC	5 cut(s)	233, 739, 1019, 1902, 1962
Bbv12I	GWGCWC	1 cut(s)	54
BbvI	GCAGC	4 cut(s)	432, 871, 1301, 1370
BccI	CCATC	4 cut(s)	224, 390, 404, 2083
BciT130I	CCWGG	3 cut(s)	199, 588, 1008
BciVI	GTATCC	1 cut(s)	1375
BclI	TGATCA	1 cut(s)	1885
BcnI	CCSGG	1 cut(s)	1379
BcoDI	GTCTC	1 cut(s)	126
BfaI	CTAG	5 cut(s)	453, 936, 1367, 1803, 1844
BfoI	RGCGCY	1 cut(s)	195
BfuAI	ACCTGC	1 cut(s)	909
BfuI	GTATCC	1 cut(s)	1375
BglI	GCCNNNNNGGC	1 cut(s)	162
BglII	AGATCT	1 cut(s)	1732
BisI	GCNGC	6 cut(s)	157, 327, 421, 860, 1290, 1359
BlsI	GCNGC	6 cut(s)	158, 328, 422, 861, 1291, 1360
Bme1390I	CCNGG	4 cut(s)	199, 588, 1008, 1379
Bme18I	GGWCC	2 cut(s)	652, 1969
BmeT110I	CYCGRG	1 cut(s)	340
BmgT120I	GGNCC	5 cut(s)	163, 164, 652, 1407, 1969
BmiI	GGNNCC	6 cut(s)	109, 165, 166, 193, 325, 804
BmrFI	CCNGG	4 cut(s)	199, 588, 1008, 1379
BmrI	ACTGGG	2 cut(s)	1159, 2168
BmsI	GCATC	4 cut(s)	432, 1193, 1505, 1663
BmuI	ACTGGG	2 cut(s)	1159, 2168
BoxI	GACNNNNGTC	1 cut(s)	672
BpiI	GAAGAC	5 cut(s)	233, 739, 1019, 1902, 1962
Bpu14I	TTCGAA	1 cut(s)	1757
BpuMI	CCSGG	1 cut(s)	1379
BsaAI	YACGTR	1 cut(s)	1419
BsaBI	GATNNNNATC	2 cut(s)	1781, 2049
BsaHI	GRCGYC	5 cut(s)	144, 192, 237, 284, 1253
BsaJI	CCNNGG	1 cut(s)	231
BsaWI	WCCGGW	1 cut(s)	1339
BsaXI	ACNNNNNCTCC	2 cut(s)	829, 859
Bsc4I	CCNNNNNNNGG	6 cut(s)	104, 410, 661, 967, 1346, 2097
Bse118I	RCCGGY	4 cut(s)	188, 591, 1339, 1741
Bse1I	ACTGG	5 cut(s)	208, 579, 1154, 1793, 2163
Bse21I	CCTNAGG	1 cut(s)	405
Bse8I	GATNNNNATC	2 cut(s)	1781, 2049
BseBI	CCWGG	3 cut(s)	199, 588, 1008
BseDI	CCNNGG	1 cut(s)	231
BseGI	GGATG	3 cut(s)	415, 616, 2050
BseJI	GATNNNNATC	2 cut(s)	1781, 2049
BseLI	CCNNNNNNNGG	6 cut(s)	104, 410, 661, 967, 1346, 2097
BseMII	CTCAG	6 cut(s)	419, 765, 805, 829, 2070, 2190
BseNI	ACTGG	5 cut(s)	208, 579, 1154, 1793, 2163
BseRI	GAGGAG	4 cut(s)	120, 1646, 1724, 2054
BseSI	GKGCMC	1 cut(s)	167
BseX3I	CGGCCG	1 cut(s)	154
BseXI	GCAGC	4 cut(s)	432, 871, 1301, 1370
BseYI	CCCAGC	1 cut(s)	90
Bsh1236I	CGCG	1 cut(s)	181
Bsh1285I	CGRYCG	1 cut(s)	157
BshFI	GGCC	9 cut(s)	156, 165, 510, 591, 1125, 1206, 1409, 1792, 1878
BshNI	GGYRCC	2 cut(s)	191, 323
BshTI	ACCGGT	1 cut(s)	1339
BsiEI	CGRYCG	1 cut(s)	157
BsiHKAI	GWGCWC	1 cut(s)	54
BsiHKCI	CYCGRG	1 cut(s)	340
BsiSI	CCGG	5 cut(s)	189, 592, 1340, 1379, 1742
BslFI	GGGAC	2 cut(s)	1065, 1341
BslI	CCNNNNNNNGG	6 cut(s)	104, 410, 661, 967, 1346, 2097
BsmAI	GTCTC	1 cut(s)	126
BsmFI	GGGAC	2 cut(s)	1065, 1341
BsmI	GAATGC	3 cut(s)	709, 1087, 1338
BsnI	GGCC	9 cut(s)	156, 165, 510, 591, 1125, 1206, 1409, 1792, 1878
BsoBI	CYCGRG	1 cut(s)	340
Bsp119I	TTCGAA	1 cut(s)	1757
Bsp120I	GGGCCC	1 cut(s)	163
Bsp1286I	GDGCHC	3 cut(s)	54, 167, 341
Bsp143I	GATC	7 cut(s)	802, 1235, 1732, 1776, 1885, 2050, 2083
BspACI	CCGC	8 cut(s)	28, 157, 327, 368, 479, 1838, 1972, 2189
BspANI	GGCC	9 cut(s)	156, 165, 510, 591, 1125, 1206, 1409, 1792, 1878
BspCNI	CTCAG	6 cut(s)	418, 764, 804, 828, 2071, 2189
BspFNI	CGCG	1 cut(s)	181
BspLI	GGNNCC	6 cut(s)	109, 165, 166, 193, 325, 804
BspMI	ACCTGC	1 cut(s)	909
BspPI	GGATC	3 cut(s)	797, 810, 2091
BspQI	GCTCTTC	1 cut(s)	1683
BspT104I	TTCGAA	1 cut(s)	1757
BspT107I	GGYRCC	2 cut(s)	191, 323
BsrFI	RCCGGY	4 cut(s)	188, 591, 1339, 1741
BsrI	ACTGG	5 cut(s)	208, 579, 1154, 1793, 2163
BssAI	RCCGGY	4 cut(s)	188, 591, 1339, 1741
BssECI	CCNNGG	1 cut(s)	231
BssMI	GATC	7 cut(s)	802, 1235, 1732, 1776, 1885, 2050, 2083
BssNI	GRCGYC	5 cut(s)	144, 192, 237, 284, 1253
BssT1I	CCWWGG	1 cut(s)	231
Bst2UI	CCWGG	3 cut(s)	199, 588, 1008
Bst4CI	ACNGT	2 cut(s)	671, 1074
Bst6I	CTCTTC	6 cut(s)	129, 1103, 1653, 1683, 2012, 2031
BstACI	GRCGYC	5 cut(s)	144, 192, 237, 284, 1253
BstBAI	YACGTR	1 cut(s)	1419
BstBI	TTCGAA	1 cut(s)	1757
BstC8I	GCNNGC	8 cut(s)	32, 190, 508, 593, 1216, 1854, 1880, 1976
BstDEI	CTNAG	9 cut(s)	222, 405, 751, 791, 815, 849, 1925, 2079, 2176
BstENI	CCTNNNNNAGG	1 cut(s)	659
BstF5I	GGATG	3 cut(s)	415, 616, 2050
BstFNI	CGCG	1 cut(s)	181
BstH2I	RGCGCY	1 cut(s)	195
BstHHI	GCGC	2 cut(s)	183, 194
BstKTI	GATC	7 cut(s)	805, 1238, 1735, 1779, 1888, 2053, 2086
BstMAI	GTCTC	1 cut(s)	126
BstMBI	GATC	7 cut(s)	802, 1235, 1732, 1776, 1885, 2050, 2083
BstMCI	CGRYCG	1 cut(s)	157
BstMWI	GCNNNNNNNGC	6 cut(s)	162, 189, 588, 601, 1406, 1853
BstNI	CCWGG	3 cut(s)	199, 588, 1008
BstPAI	GACNNNNGTC	1 cut(s)	672
BstSCI	CCNGG	4 cut(s)	197, 586, 1006, 1377
BstSLI	GKGCMC	1 cut(s)	167
BstUI	CGCG	1 cut(s)	181
BstV1I	GCAGC	4 cut(s)	432, 871, 1301, 1370
BstV2I	GAAGAC	5 cut(s)	233, 739, 1019, 1902, 1962
BstX2I	RGATCY	2 cut(s)	802, 1732
BstYI	RGATCY	2 cut(s)	802, 1732
BstZI	CGGCCG	1 cut(s)	154
Bsu36I	CCTNAGG	1 cut(s)	405
BsuI	GTATCC	1 cut(s)	1375
BsuRI	GGCC	9 cut(s)	156, 165, 510, 591, 1125, 1206, 1409, 1792, 1878
BtsCI	GGATG	3 cut(s)	415, 616, 2050
BtsIMutI	CAGTG	4 cut(s)	698, 823, 1800, 1879
BveI	ACCTGC	1 cut(s)	909
Cac8I	GCNNGC	8 cut(s)	32, 190, 508, 593, 1216, 1854, 1880, 1976
CaiI	CAGNNNCTG	1 cut(s)	1396
CfoI	GCGC	2 cut(s)	183, 194
Cfr10I	RCCGGY	4 cut(s)	188, 591, 1339, 1741
Cfr13I	GGNCC	5 cut(s)	163, 164, 652, 1407, 1969
CseI	GACGC	5 cut(s)	152, 245, 273, 1261, 1967
CsiI	ACCWGGT	1 cut(s)	197
Csp6I	GTAC	2 cut(s)	256, 1375
CspAI	ACCGGT	1 cut(s)	1339
CviAII	CATG	7 cut(s)	78, 118, 160, 607, 824, 1031, 2227
CviQI	GTAC	2 cut(s)	256, 1375
DdeI	CTNAG	9 cut(s)	222, 405, 751, 791, 815, 849, 1925, 2079, 2176
DinI	GGCGCC	1 cut(s)	193
DpnI	GATC	7 cut(s)	804, 1237, 1734, 1778, 1887, 2052, 2085
DpnII	GATC	7 cut(s)	802, 1235, 1732, 1776, 1885, 2050, 2083
DraI	TTTAAA	2 cut(s)	994, 1536
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
EaeI	YGGCCR	3 cut(s)	154, 589, 1204
EagI	CGGCCG	1 cut(s)	154
Eam1104I	CTCTTC	6 cut(s)	129, 1103, 1653, 1683, 2012, 2031
EarI	CTCTTC	6 cut(s)	129, 1103, 1653, 1683, 2012, 2031
Ecl136II	GAGCTC	1 cut(s)	52
EclXI	CGGCCG	1 cut(s)	154
Eco130I	CCWWGG	1 cut(s)	231
Eco147I	AGGCCT	1 cut(s)	1125
Eco24I	GRGCYC	3 cut(s)	54, 167, 341
Eco47I	GGWCC	2 cut(s)	652, 1969
Eco52I	CGGCCG	1 cut(s)	154
Eco53kI	GAGCTC	1 cut(s)	52
Eco57I	CTGAAG	5 cut(s)	584, 626, 1242, 1373, 1445
Eco81I	CCTNAGG	1 cut(s)	405
Eco88I	CYCGRG	1 cut(s)	340
EcoICRI	GAGCTC	1 cut(s)	52
EcoNI	CCTNNNNNAGG	1 cut(s)	659
EcoO109I	RGGNCCY	2 cut(s)	164, 1407
EcoRII	CCWGG	3 cut(s)	197, 586, 1006
EcoT14I	CCWWGG	1 cut(s)	231
EcoT38I	GRGCYC	3 cut(s)	54, 167, 341
EgeI	GGCGCC	1 cut(s)	193
EheI	GGCGCC	1 cut(s)	193
ErhI	CCWWGG	1 cut(s)	231
FaeI	CATG	7 cut(s)	81, 121, 163, 610, 827, 1034, 2230
FalI	AAGNNNNNCTT	8 cut(s)	224, 256, 1620, 1652, 1662, 1694, 2096, 2128
FaqI	GGGAC	2 cut(s)	1065, 1341
FatI	CATG	7 cut(s)	77, 117, 159, 606, 823, 1030, 2226
FauI	CCCGC	1 cut(s)	35
FbaI	TGATCA	1 cut(s)	1885
FblI	GTMKAC	1 cut(s)	1507
Fnu4HI	GCNGC	6 cut(s)	157, 327, 421, 860, 1290, 1359
FokI	GGATG	3 cut(s)	422, 623, 2057
FriOI	GRGCYC	3 cut(s)	54, 167, 341
Fsp4HI	GCNGC	6 cut(s)	157, 327, 421, 860, 1290, 1359
FspBI	CTAG	5 cut(s)	453, 936, 1367, 1803, 1844
GlaI	GCGC	2 cut(s)	182, 193
GluI	GCNGC	6 cut(s)	157, 327, 421, 860, 1290, 1359
GsaI	CCCAGC	1 cut(s)	94
HaeII	RGCGCY	1 cut(s)	195
HaeIII	GGCC	9 cut(s)	156, 165, 510, 591, 1125, 1206, 1409, 1792, 1878
HapII	CCGG	5 cut(s)	189, 592, 1340, 1379, 1742
HgaI	GACGC	5 cut(s)	152, 245, 273, 1261, 1967
HhaI	GCGC	2 cut(s)	183, 194
Hin1I	GRCGYC	5 cut(s)	144, 192, 237, 284, 1253
Hin1II	CATG	7 cut(s)	81, 121, 163, 610, 827, 1034, 2230
Hin6I	GCGC	2 cut(s)	181, 192
HinP1I	GCGC	2 cut(s)	181, 192
HincII	GTYRAC	1 cut(s)	1147
HindII	GTYRAC	1 cut(s)	1147
HindIII	AAGCTT	2 cut(s)	1922, 2199
HinfI	GANTC	8 cut(s)	86, 349, 680, 789, 1223, 1806, 2060, 2174
HpaII	CCGG	5 cut(s)	189, 592, 1340, 1379, 1742
HphI	GGTGA	2 cut(s)	1658, 2144
Hpy166II	GTNNAC	6 cut(s)	635, 1077, 1147, 1435, 1508, 1948
Hpy8I	GTNNAC	6 cut(s)	635, 1077, 1147, 1435, 1508, 1948
Hpy99I	CGWCG	4 cut(s)	146, 155, 1983, 1986
HpyCH4III	ACNGT	2 cut(s)	671, 1074
HpyCH4IV	ACGT	1 cut(s)	1418
HpyCH4V	TGCA	8 cut(s)	582, 707, 785, 823, 859, 1184, 1336, 2230
HpyF10VI	GCNNNNNNNGC	6 cut(s)	162, 189, 588, 601, 1406, 1853
HpyF3I	CTNAG	9 cut(s)	222, 405, 751, 791, 815, 849, 1925, 2079, 2176
HpySE526I	ACGT	1 cut(s)	1418
Hsp92I	GRCGYC	5 cut(s)	144, 192, 237, 284, 1253
Hsp92II	CATG	7 cut(s)	81, 121, 163, 610, 827, 1034, 2230
HspAI	GCGC	2 cut(s)	181, 192
KasI	GGCGCC	1 cut(s)	191
KroI	GCCGGC	2 cut(s)	188, 591
KroNI	GCCGGC	2 cut(s)	190, 593
Ksp22I	TGATCA	1 cut(s)	1885
Kzo9I	GATC	7 cut(s)	802, 1235, 1732, 1776, 1885, 2050, 2083
LguI	GCTCTTC	1 cut(s)	1683
LmnI	GCTCC	8 cut(s)	49, 57, 113, 550, 909, 1005, 1618, 1633
Lsp1109I	GCAGC	4 cut(s)	432, 871, 1301, 1370
LweI	GCATC	4 cut(s)	432, 1193, 1505, 1663
MabI	ACCWGGT	1 cut(s)	197
MaeI	CTAG	5 cut(s)	453, 936, 1367, 1803, 1844
MaeII	ACGT	1 cut(s)	1418
MaeIII	GTNAC	1 cut(s)	835
MalI	GATC	7 cut(s)	804, 1237, 1734, 1778, 1887, 2052, 2085
MboI	GATC	7 cut(s)	802, 1235, 1732, 1776, 1885, 2050, 2083
MfeI	CAATTG	1 cut(s)	1479
MflI	RGATCY	2 cut(s)	802, 1732
MhlI	GDGCHC	3 cut(s)	54, 167, 341
Mly113I	GGCGCC	1 cut(s)	192
MlyI	GAGTC	4 cut(s)	343, 783, 1815, 2168
MmeI	TCCRAC	2 cut(s)	165, 461
MreI	CGCCGGCG	1 cut(s)	188
MroNI	GCCGGC	2 cut(s)	188, 591
MseI	TTAA	7 cut(s)	473, 993, 1313, 1535, 1653, 1772, 2219
MslI	CAYNNNNRTG	2 cut(s)	263, 609
MspI	CCGG	5 cut(s)	189, 592, 1340, 1379, 1742
MspR9I	CCNGG	4 cut(s)	199, 588, 1008, 1379
MunI	CAATTG	1 cut(s)	1479
Mva1269I	GAATGC	3 cut(s)	709, 1087, 1338
MvaI	CCWGG	3 cut(s)	199, 588, 1008
MvnI	CGCG	1 cut(s)	181
MwoI	GCNNNNNNNGC	6 cut(s)	162, 189, 588, 601, 1406, 1853
NaeI	GCCGGC	2 cut(s)	190, 593
NarI	GGCGCC	1 cut(s)	192
NciI	CCSGG	1 cut(s)	1379
NdeII	GATC	7 cut(s)	802, 1235, 1732, 1776, 1885, 2050, 2083
NgoMIV	GCCGGC	2 cut(s)	188, 591
NlaIII	CATG	7 cut(s)	81, 121, 163, 610, 827, 1034, 2230
NlaIV	GGNNCC	6 cut(s)	109, 165, 166, 193, 325, 804
NmuCI	GTSAC	1 cut(s)	835
NspV	TTCGAA	1 cut(s)	1757
PceI	AGGCCT	1 cut(s)	1125
PciSI	GCTCTTC	1 cut(s)	1683
PcsI	WCGNNNNNNNCGW	3 cut(s)	267, 1815, 1990
PctI	GAATGC	3 cut(s)	709, 1087, 1338
PdiI	GCCGGC	2 cut(s)	190, 593
PfeI	GAWTC	4 cut(s)	86, 680, 1223, 2060
PfoI	TCCNGGA	1 cut(s)	1006
PinAI	ACCGGT	1 cut(s)	1339
PkrI	GCNGC	6 cut(s)	158, 328, 422, 861, 1291, 1360
PleI	GAGTC	4 cut(s)	343, 783, 1814, 2168
PluTI	GGCGCC	1 cut(s)	195
PpsI	GAGTC	4 cut(s)	343, 783, 1814, 2168
Ppu21I	YACGTR	1 cut(s)	1419
PshAI	GACNNNNGTC	1 cut(s)	672
PsiI	TTATAA	1 cut(s)	1917
Psp124BI	GAGCTC	1 cut(s)	54
Psp6I	CCWGG	3 cut(s)	197, 586, 1006
PspFI	CCCAGC	1 cut(s)	90
PspGI	CCWGG	3 cut(s)	197, 586, 1006
PspN4I	GGNNCC	6 cut(s)	109, 165, 166, 193, 325, 804
PspOMI	GGGCCC	1 cut(s)	163
PspPI	GGNCC	5 cut(s)	163, 164, 652, 1407, 1969
PstNI	CAGNNNCTG	1 cut(s)	1396
PsuI	RGATCY	2 cut(s)	802, 1732
RsaI	GTAC	2 cut(s)	257, 1376
RsaNI	GTAC	2 cut(s)	256, 1375
RseI	CAYNNNNRTG	2 cut(s)	263, 609
SacI	GAGCTC	1 cut(s)	54
SapI	GCTCTTC	1 cut(s)	1683
SaqAI	TTAA	7 cut(s)	473, 993, 1313, 1535, 1653, 1772, 2219
SatI	GCNGC	6 cut(s)	157, 327, 421, 860, 1290, 1359
Sau3AI	GATC	7 cut(s)	802, 1235, 1732, 1776, 1885, 2050, 2083
Sau96I	GGNCC	5 cut(s)	163, 164, 652, 1407, 1969
SchI	GAGTC	4 cut(s)	343, 783, 1815, 2168
ScrFI	CCNGG	4 cut(s)	199, 588, 1008, 1379
SduI	GDGCHC	3 cut(s)	54, 167, 341
SexAI	ACCWGGT	1 cut(s)	197
SfaNI	GCATC	4 cut(s)	432, 1193, 1505, 1663
SfiI	GGCCNNNNNGGCC	1 cut(s)	162
SfoI	GGCGCC	1 cut(s)	193
SfuI	TTCGAA	1 cut(s)	1757
SgrAI	CRCCGGYG	1 cut(s)	188
SinI	GGWCC	2 cut(s)	652, 1969
SmiMI	CAYNNNNRTG	2 cut(s)	263, 609
SseBI	AGGCCT	1 cut(s)	1125
SsiI	CCGC	8 cut(s)	28, 157, 327, 368, 479, 1838, 1972, 2189
SspDI	GGCGCC	1 cut(s)	191
SspI	AATATT	1 cut(s)	1913
SspMI	CTAG	5 cut(s)	453, 936, 1367, 1803, 1844
SstI	GAGCTC	1 cut(s)	54
StuI	AGGCCT	1 cut(s)	1125
StyD4I	CCNGG	4 cut(s)	197, 586, 1006, 1377
StyI	CCWWGG	1 cut(s)	231
TaaI	ACNGT	2 cut(s)	671, 1074
TaiI	ACGT	1 cut(s)	1421
TaqI	TCGA	6 cut(s)	63, 204, 261, 1103, 1757, 2086
TaqII	GACCGA	1 cut(s)	284
TatI	WGTACW	1 cut(s)	255
TauI	GCSGC	2 cut(s)	159, 329
TfiI	GAWTC	4 cut(s)	86, 680, 1223, 2060
Tru1I	TTAA	7 cut(s)	473, 993, 1313, 1535, 1653, 1772, 2219
Tru9I	TTAA	7 cut(s)	473, 993, 1313, 1535, 1653, 1772, 2219
TscAI	CASTG	4 cut(s)	705, 823, 1800, 1879
TseFI	GTSAC	1 cut(s)	835
TseI	GCWGC	4 cut(s)	420, 859, 1289, 1358
Tsp45I	GTSAC	1 cut(s)	835
TspDTI	ATGAA	8 cut(s)	627, 1019, 1055, 1484, 1500, 1626, 2012, 2024
TspGWI	ACGGA	2 cut(s)	992, 1517
TspRI	CASTG	4 cut(s)	705, 823, 1800, 1879
VpaK11BI	GGWCC	2 cut(s)	652, 1969
XagI	CCTNNNNNAGG	1 cut(s)	659
XapI	RAATTY	6 cut(s)	622, 853, 931, 974, 1487, 1593
XcmI	CCANNNNNNNNNTGG	1 cut(s)	302
XmiI	GTMKAC	1 cut(s)	1507
XspI	CTAG	5 cut(s)	453, 936, 1367, 1803, 1844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.