Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0002471

Physical Location & Seq

Genomic Coordinates Forward (+)

72393648 .. 72398315

Gene Structure 4668 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG428100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGAGAAAACCCATATCAAAAACAACGCGGAAGCAAAAGCTACTCTCGGAGGTCGAAGAAATCAACCTCCTCAATTCATGGATCGAATCCCAGAAACCCGACTGCGGCTCCAACCCCATGTCTCTCCCGCCTCTTCCCTCCAAGGCCCCCATTGGGCGCGTGGACCCCACCTCCTTCTCCCGCTACGCTGGCGCCACCAGGTTCGCCGACCTCCCCATCTCCAAGAAGACCAAGGACGCCTTGCGCCAGTCCAAGTACACCGACATGACCGATATCCAGAGGGCGTGTTTGCCCCACGCGCTCTGCGGCAGGGATATTCTCGGCGCTGCCAAGACCGGCTCCGGCAAGACTCTGGCTTTTGTGATTCCGCTTCTGGAAAAATTGTATAAAGAGAGATGGAATCCTGAGGATGGGGTAGGCAGCATTATTATATCTCCGACAAGGGAATTAGCTAGTCAAACGTTTGATGTGTTAAGAGCAGTTGGGAAGCACCATAATTTTAGTGCTGGCCTCCTAATTGGTGGTCGAAAAGATGTTGAAGCGGAGAAGGAGCGTGTAAATGAACTGAACATACTGGTTTGCACTCCTGGACGACTTCTACAACACATGGATGAGACACCAAATTTTGAGTGTTCACAGCTACAGGTTTTGGTCCTCGATGAGGCAGATCGTATTCTTGATGTGGGATTTAAGAAGGCACTGAACGCCATCATTTCACAGCTACCTAAGAGAAGACAAACCTTTCTCTTCTCTGCAACTCAAACAAAGTCGGTTCAAGATCTTGCAAGACTTAGTTTGAAGGACCCAGAGTACCTTAGCGTGCATGAGAAAGCTACCAGAGCCACTCCTAATCGTTTGAAGCAAACTGCAATGATTGTTCCTCTTGATAAAAAACTAGATATGCTGTGGAGCTTCATAAAGGCGCATCTAAATTCTAGGATTTTAGTGTTCTTATCGACACGTAAACAGGTAAAGTTTGTCTATGAAGCATTTAAGAAGCTCCGACCTGGAATACCCCTGAAGTGTCTTCATGGTAAGATGAAGCAAGAGGGAAGAATGGGAACATACTCGCAGTTTCATGAAAAAGCTACGGTCCTTTTCTCAACTGATGTAGCTTCAAGAGGCCTTGATTTCAACCAGGCAGTCGACTGGGTTGTTCAGGTGGATTGTCCAGAAGATGTTGCATCCTATATACACAGAGTTGGCCGAACAGCGCGCTATCAATCAGAAGGGCGATCACTTTTATTTGTGATGCCCTCAGAAACAAAAATGCTTGAGAAATTAGATGCCGCAAAAATACCCATAGAAAGCATCAAGGCTAACAACAAGAGACTGCAACCTGTCAGTGGGTTGCTATCAGCTTTGCTAGTCAAGTACCCAGACACACTTCCAGGTCTGGCCAAAAGGGCCTTTATCACGTACTTGAAGTCTATTCAAAATCACAAGGACAAAGAAGTTTTTGACGTAATGCAACTGCCAGTTGATGAGTTTTCAGCATCAATGGGTTTACCAATGACCCCCAAGATCCGTTTTTCAAACCACAAAATGAAGTCCAAGAAACCATTGGAACTGTCTCCCATTGTTGAACCAGAAAGTTCCGACATGGAGAATGCATTAGAGACTCCCAGAGAGGAGCTTGATATTGGTGATTCGGAGGAAGAGGAAGTGGAGAAAGGTCTTCTTCGAATAAATGATGCACCAACTGAGAGAGAGGAGGAAGGAAGACAGATTGCAGATATTATGTATGTTGCTTGTCTAATATGCTTTTTTATTTGTTTATTATTATTATTCTTATTATTATTATTTATATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

604

Amino Acids

68.09

Weight (kDa)

8.96

Isoelectric Point (pI)

45.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	90 - 261	5.5e-45	DEAD/DEAH box helicase
ResIII	PF04851	109 - 253	2.1e-07	Type III restriction enzyme, res subunit
Helicase_C	PF00271	298 - 407	6.4e-24	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	466 - 509	1.2e-10	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54910
fragaria_vesca	FvH4_4g36230 FvH4_4g36230 FvH4_4g36230 FvH4_5g34980
malus_domestica	MD08G1022200.v1.1 MD13G1010800.v1.1 MD15G1026900.v1.1
prunus_persica	Prupe.1G342200_v2.0.a1
pyrus_communis	pycom08g13590 pycom13g00910 pycom15g02270 pycom15g02280 pycom15g02290
rosa_chinensis	RchiOBHm_Chr1g0336991 RchiOBHm_Chr4g0445981
rosa_laevigata	RLG00000005702 RLG00000029316
rosa_multiflora	Rmu_co8191210.1_g000001 Rmu_sc0000115.1_g000004 Rmu_sc0003001.1_g000004 Rmu_sc0008543.1_g000002 Rmu_sc0009742.1_g000002 Rmu_sc0036469.1_g000003
rosa_roxburghii	Rroxscaffold_4G00315110 Rroxscaffold_5G00386390
rosa_rugosa	Rorug01G0129500 Rorug01G0130100 Rorug04G0366700 Rorug04G0366700
rosa_samantha	Rh1AG150500 Rh1BG118700 Rh1BG118900 Rh1CG141800 Rh1DG157800 Rh4AG428100 Rh4BG437700 Rh4CG454400 Rh4DG436200
rosa_wichuraiana	Rw1G012290 Rw4G036610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	191
AccI	GTMKAC	1 cut(s)	1146
AccII	CGCG	4 cut(s)	28, 159, 299, 1216
AciI	CCGC	8 cut(s)	28, 105, 128, 181, 306, 368, 542, 1290
AclI	AACGTT	1 cut(s)	461
AclWI	GGATC	2 cut(s)	89, 1519
AcoI	YGGCCR	2 cut(s)	1204, 1398
AcsI	RAATTY	2 cut(s)	622, 931
AcuI	CTGAAG	1 cut(s)	1040
AcyI	GRCGYC	2 cut(s)	192, 237
AfaI	GTAC	4 cut(s)	257, 812, 1376, 1421
AfiI	CCNNNNNNNGG	5 cut(s)	104, 153, 410, 661, 1346
AflIII	ACRYGT	1 cut(s)	959
AjnI	CCWGG	5 cut(s)	197, 586, 1006, 1137, 1390
Alw26I	GTCTC	5 cut(s)	126, 608, 1324, 1578, 1613
AlwI	GGATC	2 cut(s)	89, 1519
AoxI	GGCC	6 cut(s)	144, 508, 1123, 1204, 1398, 1407
ApeKI	GCWGC	2 cut(s)	326, 420
ApoI	RAATTY	2 cut(s)	622, 931
AspLEI	GCGC	8 cut(s)	159, 194, 246, 301, 326, 925, 1216, 1218
AspS9I	GGNCC	6 cut(s)	145, 163, 652, 802, 1093, 1407
AsuHPI	GGTGA	1 cut(s)	1658
AsuII	TTCGAA	1 cut(s)	1684
AvaII	GGWCC	4 cut(s)	163, 652, 802, 1093
AxyI	CCTNAGG	1 cut(s)	405
BalI	TGGCCA	1 cut(s)	1400
BanI	GGYRCC	1 cut(s)	191
BbsI	GAAGAC	5 cut(s)	233, 739, 1019, 1670, 1729
BbvI	GCAGC	2 cut(s)	313, 432
BccI	CCATC	4 cut(s)	224, 390, 404, 716
BciT130I	CCWGG	5 cut(s)	199, 588, 1008, 1139, 1392
BcoDI	GTCTC	5 cut(s)	126, 608, 1324, 1578, 1613
BfaI	CTAG	4 cut(s)	453, 896, 936, 1367
BfmI	CTRYAG	1 cut(s)	641
BfoI	RGCGCY	2 cut(s)	195, 327
BglI	GCCNNNNNGGC	1 cut(s)	1406
BglII	AGATCT	1 cut(s)	778
BisI	GCNGC	5 cut(s)	106, 307, 327, 421, 1290
BlsI	GCNGC	5 cut(s)	107, 308, 328, 422, 1291
Bme1390I	CCNGG	5 cut(s)	199, 588, 1008, 1139, 1392
Bme18I	GGWCC	4 cut(s)	163, 652, 802, 1093
BmgT120I	GGNCC	6 cut(s)	145, 163, 652, 802, 1093, 1407
BmiI	GGNNCC	6 cut(s)	109, 147, 165, 193, 340, 804
BmrFI	CCNGG	5 cut(s)	199, 588, 1008, 1139, 1392
BmrI	ACTGGG	1 cut(s)	1159
BmsI	GCATC	7 cut(s)	934, 1193, 1242, 1276, 1320, 1505, 1684
BmuI	ACTGGG	1 cut(s)	1159
BpiI	GAAGAC	5 cut(s)	233, 739, 1019, 1670, 1729
Bpu10I	CCTNAGC	1 cut(s)	815
Bpu14I	TTCGAA	1 cut(s)	1684
BpuEI	CTTGAG	1 cut(s)	1295
BsaAI	YACGTR	2 cut(s)	962, 1419
BsaHI	GRCGYC	2 cut(s)	192, 237
BsaJI	CCNNGG	2 cut(s)	141, 231
BsaXI	ACNNNNNCTCC	4 cut(s)	92, 122, 155, 185
Bsc4I	CCNNNNNNNGG	5 cut(s)	104, 153, 410, 661, 1346
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	4 cut(s)	247, 579, 1154, 1478
Bse21I	CCTNAGG	1 cut(s)	405
Bse3DI	GCAATG	1 cut(s)	876
BseBI	CCWGG	5 cut(s)	199, 588, 1008, 1139, 1392
BseDI	CCNNGG	2 cut(s)	141, 231
BseGI	GGATG	3 cut(s)	415, 616, 1184
BseLI	CCNNNNNNNGG	5 cut(s)	104, 153, 410, 661, 1346
BseMI	GCAATG	1 cut(s)	876
BseMII	CTCAG	3 cut(s)	396, 1272, 1695
BseNI	ACTGG	4 cut(s)	247, 579, 1154, 1478
BsePI	GCGCGC	1 cut(s)	1214
BseRI	GAGGAG	3 cut(s)	59, 1646, 1727
BseXI	GCAGC	2 cut(s)	313, 432
Bsh1236I	CGCG	4 cut(s)	28, 159, 299, 1216
BshFI	GGCC	6 cut(s)	146, 510, 1125, 1206, 1400, 1409
BshNI	GGYRCC	1 cut(s)	191
BsiSI	CCGG	2 cut(s)	336, 342
BslI	CCNNNNNNNGG	5 cut(s)	104, 153, 410, 661, 1346
BsmAI	GTCTC	5 cut(s)	126, 608, 1324, 1578, 1613
BsmI	GAATGC	1 cut(s)	1615
BsnI	GGCC	6 cut(s)	146, 510, 1125, 1206, 1400, 1409
Bsp119I	TTCGAA	1 cut(s)	1684
Bsp143I	GATC	5 cut(s)	81, 667, 778, 1235, 1524
BspACI	CCGC	8 cut(s)	28, 105, 128, 181, 306, 368, 542, 1290
BspANI	GGCC	6 cut(s)	146, 510, 1125, 1206, 1400, 1409
BspCNI	CTCAG	3 cut(s)	397, 1271, 1696
BspFNI	CGCG	4 cut(s)	28, 159, 299, 1216
BspHI	TCATGA	1 cut(s)	1078
BspLI	GGNNCC	6 cut(s)	109, 147, 165, 193, 340, 804
BspPI	GGATC	2 cut(s)	89, 1519
BspT104I	TTCGAA	1 cut(s)	1684
BspT107I	GGYRCC	1 cut(s)	191
BsrDI	GCAATG	1 cut(s)	876
BsrFI	RCCGGY	1 cut(s)	335
BsrI	ACTGG	4 cut(s)	247, 579, 1154, 1478
BssAI	RCCGGY	1 cut(s)	335
BssECI	CCNNGG	2 cut(s)	141, 231
BssHII	GCGCGC	1 cut(s)	1214
BssMI	GATC	5 cut(s)	81, 667, 778, 1235, 1524
BssNI	GRCGYC	2 cut(s)	192, 237
BssT1I	CCWWGG	2 cut(s)	141, 231
Bst2UI	CCWGG	5 cut(s)	199, 588, 1008, 1139, 1392
Bst4CI	ACNGT	2 cut(s)	1093, 1572
Bst6I	CTCTTC	3 cut(s)	138, 752, 1653
BstACI	GRCGYC	2 cut(s)	192, 237
BstBAI	YACGTR	2 cut(s)	962, 1419
BstBI	TTCGAA	1 cut(s)	1684
BstC8I	GCNNGC	4 cut(s)	190, 508, 821, 1216
BstDEI	CTNAG	7 cut(s)	405, 726, 791, 815, 1258, 1704, 1812
BstENI	CCTNNNNNAGG	1 cut(s)	659
BstF5I	GGATG	3 cut(s)	415, 616, 1184
BstFNI	CGCG	4 cut(s)	28, 159, 299, 1216
BstH2I	RGCGCY	2 cut(s)	195, 327
BstHHI	GCGC	8 cut(s)	159, 194, 246, 301, 326, 925, 1216, 1218
BstKTI	GATC	5 cut(s)	84, 670, 781, 1238, 1527
BstMAI	GTCTC	5 cut(s)	126, 608, 1324, 1578, 1613
BstMBI	GATC	5 cut(s)	81, 667, 778, 1235, 1524
BstMWI	GCNNNNNNNGC	5 cut(s)	189, 298, 704, 839, 1406
BstNI	CCWGG	5 cut(s)	199, 588, 1008, 1139, 1392
BstSCI	CCNGG	5 cut(s)	197, 586, 1006, 1137, 1390
BstSFI	CTRYAG	1 cut(s)	641
BstUI	CGCG	4 cut(s)	28, 159, 299, 1216
BstV1I	GCAGC	2 cut(s)	313, 432
BstV2I	GAAGAC	5 cut(s)	233, 739, 1019, 1670, 1729
BstX2I	RGATCY	2 cut(s)	778, 1524
BstYI	RGATCY	2 cut(s)	778, 1524
Bsu36I	CCTNAGG	1 cut(s)	405
BsuRI	GGCC	6 cut(s)	146, 510, 1125, 1206, 1400, 1409
BtsCI	GGATG	3 cut(s)	415, 616, 1184
BtsIMutI	CAGTG	2 cut(s)	698, 1351
Cac8I	GCNNGC	4 cut(s)	190, 508, 821, 1216
CciI	TCATGA	1 cut(s)	1078
CfoI	GCGC	8 cut(s)	159, 194, 246, 301, 326, 925, 1216, 1218
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	6 cut(s)	145, 163, 652, 802, 1093, 1407
CseI	GACGC	1 cut(s)	245
CsiI	ACCWGGT	1 cut(s)	197
Csp6I	GTAC	4 cut(s)	256, 811, 1375, 1420
CviAII	CATG	8 cut(s)	78, 118, 265, 607, 824, 1031, 1079, 1603
CviQI	GTAC	4 cut(s)	256, 811, 1375, 1420
DdeI	CTNAG	7 cut(s)	405, 726, 791, 815, 1258, 1704, 1812
DinI	GGCGCC	1 cut(s)	193
DpnI	GATC	5 cut(s)	83, 669, 780, 1237, 1526
DpnII	GATC	5 cut(s)	81, 667, 778, 1235, 1524
EaeI	YGGCCR	2 cut(s)	1204, 1398
Eam1104I	CTCTTC	3 cut(s)	138, 752, 1653
EarI	CTCTTC	3 cut(s)	138, 752, 1653
Eco130I	CCWWGG	2 cut(s)	141, 231
Eco147I	AGGCCT	1 cut(s)	1125
Eco32I	GATATC	1 cut(s)	274
Eco47I	GGWCC	4 cut(s)	163, 652, 802, 1093
Eco57I	CTGAAG	1 cut(s)	1040
Eco81I	CCTNAGG	1 cut(s)	405
EcoNI	CCTNNNNNAGG	1 cut(s)	659
EcoO109I	RGGNCCY	3 cut(s)	145, 802, 1407
EcoRII	CCWGG	5 cut(s)	197, 586, 1006, 1137, 1390
EcoRV	GATATC	1 cut(s)	274
EcoT14I	CCWWGG	2 cut(s)	141, 231
EcoT22I	ATGCAT	1 cut(s)	1615
EgeI	GGCGCC	1 cut(s)	193
EheI	GGCGCC	1 cut(s)	193
ErhI	CCWWGG	2 cut(s)	141, 231
FaeI	CATG	8 cut(s)	81, 121, 268, 610, 827, 1034, 1082, 1606
FalI	AAGNNNNNCTT	4 cut(s)	224, 256, 1665, 1697
FatI	CATG	8 cut(s)	77, 117, 264, 606, 823, 1030, 1078, 1602
FauI	CCCGC	2 cut(s)	135, 188
FblI	GTMKAC	1 cut(s)	1146
Fnu4HI	GCNGC	5 cut(s)	106, 307, 327, 421, 1290
FokI	GGATG	3 cut(s)	422, 623, 1171
Fsp4HI	GCNGC	5 cut(s)	106, 307, 327, 421, 1290
FspBI	CTAG	4 cut(s)	453, 896, 936, 1367
GlaI	GCGC	8 cut(s)	158, 193, 245, 300, 325, 924, 1215, 1217
GluI	GCNGC	5 cut(s)	106, 307, 327, 421, 1290
HaeII	RGCGCY	2 cut(s)	195, 327
HaeIII	GGCC	6 cut(s)	146, 510, 1125, 1206, 1400, 1409
HapII	CCGG	2 cut(s)	336, 342
HgaI	GACGC	1 cut(s)	245
HhaI	GCGC	8 cut(s)	159, 194, 246, 301, 326, 925, 1216, 1218
Hin1I	GRCGYC	2 cut(s)	192, 237
Hin1II	CATG	8 cut(s)	81, 121, 268, 610, 827, 1034, 1082, 1606
Hin6I	GCGC	8 cut(s)	157, 192, 244, 299, 324, 923, 1214, 1216
HinP1I	GCGC	8 cut(s)	157, 192, 244, 299, 324, 923, 1214, 1216
HincII	GTYRAC	1 cut(s)	1147
HindII	GTYRAC	1 cut(s)	1147
HinfI	GANTC	6 cut(s)	86, 349, 364, 400, 1621, 1649
HpaII	CCGG	2 cut(s)	336, 342
HphI	GGTGA	1 cut(s)	1658
Hpy166II	GTNNAC	6 cut(s)	163, 258, 635, 965, 1147, 1508
Hpy188I	TCNGA	7 cut(s)	49, 438, 1004, 1228, 1261, 1600, 1654
Hpy188III	TCNNGA	9 cut(s)	277, 374, 404, 677, 776, 884, 1079, 1119, 1172
Hpy8I	GTNNAC	6 cut(s)	163, 258, 635, 965, 1147, 1508
HpyAV	CCTTC	6 cut(s)	184, 541, 688, 793, 1223, 1712
HpyCH4III	ACNGT	2 cut(s)	1093, 1572
HpyCH4IV	ACGT	4 cut(s)	461, 961, 1418, 1464
HpyF10VI	GCNNNNNNNGC	5 cut(s)	189, 298, 704, 839, 1406
HpyF3I	CTNAG	7 cut(s)	405, 726, 791, 815, 1258, 1704, 1812
HpySE526I	ACGT	4 cut(s)	461, 961, 1418, 1464
Hsp92I	GRCGYC	2 cut(s)	192, 237
Hsp92II	CATG	8 cut(s)	81, 121, 268, 610, 827, 1034, 1082, 1606
HspAI	GCGC	8 cut(s)	157, 192, 244, 299, 324, 923, 1214, 1216
KasI	GGCGCC	1 cut(s)	191
Kzo9I	GATC	5 cut(s)	81, 667, 778, 1235, 1524
LmnI	GCTCC	6 cut(s)	113, 344, 550, 909, 1005, 1633
Lsp1109I	GCAGC	2 cut(s)	313, 432
LweI	GCATC	7 cut(s)	934, 1193, 1242, 1276, 1320, 1505, 1684
MabI	ACCWGGT	1 cut(s)	197
MaeI	CTAG	4 cut(s)	453, 896, 936, 1367
MaeII	ACGT	4 cut(s)	461, 961, 1418, 1464
MalI	GATC	5 cut(s)	83, 669, 780, 1237, 1526
MboI	GATC	5 cut(s)	81, 667, 778, 1235, 1524
MflI	RGATCY	2 cut(s)	778, 1524
MlsI	TGGCCA	1 cut(s)	1400
MluCI	AATT	8 cut(s)	73, 380, 446, 496, 516, 622, 931, 1280
MluNI	TGGCCA	1 cut(s)	1400
Mly113I	GGCGCC	1 cut(s)	192
MlyI	GAGTC	2 cut(s)	343, 1615
MmeI	TCCRAC	4 cut(s)	135, 461, 1027, 1623
Mox20I	TGGCCA	1 cut(s)	1400
Mph1103I	ATGCAT	1 cut(s)	1615
MscI	TGGCCA	1 cut(s)	1400
MseI	TTAA	3 cut(s)	473, 690, 993
MslI	CAYNNNNRTG	2 cut(s)	263, 609
Msp20I	TGGCCA	1 cut(s)	1400
MspI	CCGG	2 cut(s)	336, 342
MspR9I	CCNGG	5 cut(s)	199, 588, 1008, 1139, 1392
Mva1269I	GAATGC	1 cut(s)	1615
MvaI	CCWGG	5 cut(s)	199, 588, 1008, 1139, 1392
MvnI	CGCG	4 cut(s)	28, 159, 299, 1216
MwoI	GCNNNNNNNGC	5 cut(s)	189, 298, 704, 839, 1406
NarI	GGCGCC	1 cut(s)	192
NdeII	GATC	5 cut(s)	81, 667, 778, 1235, 1524
NlaIII	CATG	8 cut(s)	81, 121, 268, 610, 827, 1034, 1082, 1606
NlaIV	GGNNCC	6 cut(s)	109, 147, 165, 193, 340, 804
NmeAIII	GCCGAG	1 cut(s)	300
NsiI	ATGCAT	1 cut(s)	1615
NspV	TTCGAA	1 cut(s)	1684
PagI	TCATGA	1 cut(s)	1078
PauI	GCGCGC	1 cut(s)	1214
PceI	AGGCCT	1 cut(s)	1125
PctI	GAATGC	1 cut(s)	1615
PfeI	GAWTC	4 cut(s)	86, 364, 400, 1649
PfoI	TCCNGGA	1 cut(s)	586
PkrI	GCNGC	5 cut(s)	107, 308, 328, 422, 1291
PleI	GAGTC	2 cut(s)	343, 1615
PluTI	GGCGCC	1 cut(s)	195
PpsI	GAGTC	2 cut(s)	343, 1615
Ppu21I	YACGTR	2 cut(s)	962, 1419
PpuMI	RGGWCCY	1 cut(s)	802
Psp1406I	AACGTT	1 cut(s)	461
Psp5II	RGGWCCY	1 cut(s)	802
Psp6I	CCWGG	5 cut(s)	197, 586, 1006, 1137, 1390
PspGI	CCWGG	5 cut(s)	197, 586, 1006, 1137, 1390
PspN4I	GGNNCC	6 cut(s)	109, 147, 165, 193, 340, 804
PspPI	GGNCC	6 cut(s)	145, 163, 652, 802, 1093, 1407
PspPPI	RGGWCCY	1 cut(s)	802
PsrI	GAACNNNNNNTAC	2 cut(s)	555, 587
PsuI	RGATCY	2 cut(s)	778, 1524
PteI	GCGCGC	1 cut(s)	1214
RsaI	GTAC	4 cut(s)	257, 812, 1376, 1421
RsaNI	GTAC	4 cut(s)	256, 811, 1375, 1420
RseI	CAYNNNNRTG	2 cut(s)	263, 609
SalI	GTCGAC	1 cut(s)	1145
SaqAI	TTAA	3 cut(s)	473, 690, 993
SatI	GCNGC	5 cut(s)	106, 307, 327, 421, 1290
Sau3AI	GATC	5 cut(s)	81, 667, 778, 1235, 1524
Sau96I	GGNCC	6 cut(s)	145, 163, 652, 802, 1093, 1407
SchI	GAGTC	2 cut(s)	343, 1615
ScrFI	CCNGG	5 cut(s)	199, 588, 1008, 1139, 1392
SexAI	ACCWGGT	1 cut(s)	197
SfaNI	GCATC	7 cut(s)	934, 1193, 1242, 1276, 1320, 1505, 1684
SfcI	CTRYAG	1 cut(s)	641
SfiI	GGCCNNNNNGGCC	1 cut(s)	1406
SfoI	GGCGCC	1 cut(s)	193
SfuI	TTCGAA	1 cut(s)	1684
SinI	GGWCC	4 cut(s)	163, 652, 802, 1093
SmiMI	CAYNNNNRTG	2 cut(s)	263, 609
SmlI	CTYRAG	1 cut(s)	1274
SmoI	CTYRAG	1 cut(s)	1274
Sse9I	AATT	8 cut(s)	73, 380, 446, 496, 516, 622, 931, 1280
SseBI	AGGCCT	1 cut(s)	1125
SsiI	CCGC	8 cut(s)	28, 105, 128, 181, 306, 368, 542, 1290
SspDI	GGCGCC	1 cut(s)	191
SspMI	CTAG	4 cut(s)	453, 896, 936, 1367
StuI	AGGCCT	1 cut(s)	1125
StyD4I	CCNGG	5 cut(s)	197, 586, 1006, 1137, 1390
StyI	CCWWGG	2 cut(s)	141, 231
TaaI	ACNGT	2 cut(s)	1093, 1572
TaiI	ACGT	4 cut(s)	464, 964, 1421, 1467
TaqI	TCGA	7 cut(s)	54, 84, 526, 657, 956, 1146, 1684
TaqII	GACCGA	1 cut(s)	284
TasI	AATT	8 cut(s)	73, 380, 446, 496, 516, 622, 931, 1280
TatI	WGTACW	1 cut(s)	255
TauI	GCSGC	3 cut(s)	108, 309, 1292
TfiI	GAWTC	4 cut(s)	86, 364, 400, 1649
Tru1I	TTAA	3 cut(s)	473, 690, 993
Tru9I	TTAA	3 cut(s)	473, 690, 993
TscAI	CASTG	2 cut(s)	705, 1351
TseI	GCWGC	2 cut(s)	326, 420
TspDTI	ATGAA	9 cut(s)	66, 576, 904, 999, 1019, 1055, 1067, 1095, 1562
TspGWI	ACGGA	1 cut(s)	1517
TspRI	CASTG	2 cut(s)	705, 1351
VpaK11BI	GGWCC	4 cut(s)	163, 652, 802, 1093
XagI	CCTNNNNNAGG	1 cut(s)	659
XapI	RAATTY	2 cut(s)	622, 931
XcmI	CCANNNNNNNNNTGG	2 cut(s)	157, 1561
XmiI	GTMKAC	1 cut(s)	1146
XspI	CTAG	4 cut(s)	453, 896, 936, 1367
Zsp2I	ATGCAT	1 cut(s)	1615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.