RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G54910 |
| fragaria_vesca | FvH4_4g36230 FvH4_4g36230 FvH4_4g36230 FvH4_5g34980 |
| malus_domestica | MD08G1022200.v1.1 MD13G1010800.v1.1 MD15G1026900.v1.1 |
| prunus_persica | Prupe.1G342200_v2.0.a1 |
| pyrus_communis | pycom08g13590 pycom13g00910 pycom15g02270 pycom15g02280 pycom15g02290 |
| rosa_chinensis | RchiOBHm_Chr1g0336991 RchiOBHm_Chr4g0445981 |
| rosa_laevigata | RLG00000005702 RLG00000029316 |
| rosa_multiflora | Rmu_co8191210.1_g000001 Rmu_sc0000115.1_g000004 Rmu_sc0003001.1_g000004 Rmu_sc0008543.1_g000002 Rmu_sc0009742.1_g000002 Rmu_sc0036469.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00315110 Rroxscaffold_5G00386390 |
| rosa_rugosa | Rorug01G0129500 Rorug01G0130100 Rorug04G0366700 Rorug04G0366700 |
| rosa_samantha | Rh1AG150500 Rh1BG118700 Rh1BG118900 Rh1CG141800 Rh1DG157800 Rh4AG428100 Rh4BG437700 Rh4CG454400 Rh4DG436200 |
| rosa_wichuraiana | Rw1G012290 Rw4G036610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 42 |
| AciI | CCGC | 2 cut(s) | 97, 314 |
| AcuI | CTGAAG | 1 cut(s) | 83 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 219 |
| AgsI | TTSAA | 1 cut(s) | 124 |
| AluBI | AGCT | 1 cut(s) | 49 |
| AluI | AGCT | 1 cut(s) | 49 |
| Alw26I | GTCTC | 1 cut(s) | 11 |
| AsuHPI | GGTGA | 1 cut(s) | 269 |
| BbsI | GAAGAC | 1 cut(s) | 35 |
| BccI | CCATC | 1 cut(s) | 248 |
| BceAI | ACGGC | 1 cut(s) | 90 |
| BclI | TGATCA | 1 cut(s) | 244 |
| BcoDI | GTCTC | 1 cut(s) | 11 |
| BpiI | GAAGAC | 1 cut(s) | 35 |
| Bpu10I | CCTNAGC | 1 cut(s) | 50 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 219 |
| Bse3DI | GCAATG | 1 cut(s) | 291 |
| BseGI | GGATG | 2 cut(s) | 85, 178 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BseMI | GCAATG | 1 cut(s) | 291 |
| BseMII | CTCAG | 1 cut(s) | 64 |
| BseRI | GAGGAG | 1 cut(s) | 182 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BsmAI | GTCTC | 1 cut(s) | 11 |
| Bsp143I | GATC | 1 cut(s) | 244 |
| BspACI | CCGC | 2 cut(s) | 97, 314 |
| BspCNI | CTCAG | 1 cut(s) | 63 |
| BspHI | TCATGA | 1 cut(s) | 247 |
| BsrDI | GCAATG | 1 cut(s) | 291 |
| BssMI | GATC | 1 cut(s) | 244 |
| Bst6I | CTCTTC | 1 cut(s) | 137 |
| BstC8I | GCNNGC | 1 cut(s) | 22 |
| BstDEI | CTNAG | 1 cut(s) | 50 |
| BstF5I | GGATG | 2 cut(s) | 85, 178 |
| BstKTI | GATC | 1 cut(s) | 247 |
| BstMAI | GTCTC | 1 cut(s) | 11 |
| BstMBI | GATC | 1 cut(s) | 244 |
| BstV2I | GAAGAC | 1 cut(s) | 35 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 310 |
| BtsCI | GGATG | 2 cut(s) | 85, 178 |
| BtsI | GCAGTG | 1 cut(s) | 247 |
| BtsIMutI | CAGTG | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 1 cut(s) | 22 |
| CciI | TCATGA | 1 cut(s) | 247 |
| CviAII | CATG | 2 cut(s) | 248, 352 |
| CviJI | RGCY | 4 cut(s) | 49, 89, 278, 326 |
| CviKI_1 | RGCY | 4 cut(s) | 49, 89, 278, 326 |
| DdeI | CTNAG | 1 cut(s) | 50 |
| DpnI | GATC | 1 cut(s) | 246 |
| DpnII | GATC | 1 cut(s) | 244 |
| Eam1104I | CTCTTC | 1 cut(s) | 137 |
| EarI | CTCTTC | 1 cut(s) | 137 |
| EciI | GGCGGA | 1 cut(s) | 329 |
| Eco57I | CTGAAG | 1 cut(s) | 83 |
| FaeI | CATG | 2 cut(s) | 251, 355 |
| FaiI | YATR | 7 cut(s) | 18, 42, 199, 232, 249, 305, 353 |
| FatI | CATG | 2 cut(s) | 247, 351 |
| FbaI | TGATCA | 1 cut(s) | 244 |
| FokI | GGATG | 2 cut(s) | 92, 185 |
| Hin1II | CATG | 2 cut(s) | 251, 355 |
| HinfI | GANTC | 2 cut(s) | 182, 299 |
| HphI | GGTGA | 1 cut(s) | 269 |
| Hpy188I | TCNGA | 3 cut(s) | 63, 181, 187 |
| Hpy188III | TCNNGA | 2 cut(s) | 110, 248 |
| Hpy99I | CGWCG | 1 cut(s) | 111 |
| HpyAV | CCTTC | 5 cut(s) | 20, 50, 61, 157, 182 |
| HpyCH4V | TGCA | 2 cut(s) | 20, 355 |
| HpyF3I | CTNAG | 1 cut(s) | 50 |
| Hsp92II | CATG | 2 cut(s) | 251, 355 |
| Ksp22I | TGATCA | 1 cut(s) | 244 |
| Kzo9I | GATC | 1 cut(s) | 244 |
| LpnPI | CCDG | 2 cut(s) | 6, 37 |
| MalI | GATC | 1 cut(s) | 246 |
| MboI | GATC | 1 cut(s) | 244 |
| MboII | GAAGA | 4 cut(s) | 40, 76, 136, 154 |
| MluCI | AATT | 1 cut(s) | 281 |
| MlyI | GAGTC | 1 cut(s) | 293 |
| MnlI | CCTC | 6 cut(s) | 64, 140, 160, 163, 187, 316 |
| MslI | CAYNNNNRTG | 1 cut(s) | 252 |
| NdeII | GATC | 1 cut(s) | 244 |
| NlaIII | CATG | 2 cut(s) | 251, 355 |
| PagI | TCATGA | 1 cut(s) | 247 |
| PfeI | GAWTC | 1 cut(s) | 182 |
| PleI | GAGTC | 1 cut(s) | 293 |
| PpsI | GAGTC | 1 cut(s) | 293 |
| PsiI | TTATAA | 1 cut(s) | 42 |
| RseI | CAYNNNNRTG | 1 cut(s) | 252 |
| Sau3AI | GATC | 1 cut(s) | 244 |
| SchI | GAGTC | 1 cut(s) | 293 |
| SetI | ASST | 3 cut(s) | 51, 61, 224 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 252 |
| Sse9I | AATT | 1 cut(s) | 281 |
| SsiI | CCGC | 2 cut(s) | 97, 314 |
| SspI | AATATT | 1 cut(s) | 38 |
| TaqI | TCGA | 1 cut(s) | 208 |
| TaqII | GACCGA | 1 cut(s) | 47 |
| TasI | AATT | 1 cut(s) | 281 |
| TfiI | GAWTC | 1 cut(s) | 182 |
| TscAI | CASTG | 1 cut(s) | 247 |
| TspDTI | ATGAA | 2 cut(s) | 149, 280 |
| TspRI | CASTG | 1 cut(s) | 247 |