Two-component response
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G61380 |
| fragaria_vesca | FvH4_5g14560 |
| malus_domestica | MD06G1197300.v1.1 MD14G1204700.v1.1 |
| prunus_persica | Prupe.5G197900_v2.0.a1 Prupe.5G198000_v2.0.a1 |
| pyrus_communis | pycom06g17420 pycom06g17430 pycom14g16910 |
| rosa_chinensis | RchiOBHm_Chr7g0182001 |
| rosa_laevigata | RLG00000005156 RLG00000005161 |
| rosa_multiflora | Rmu_co8226389.1_g000001 Rmu_sc0003511.1_g000044 Rmu_sc0017796.1_g000001 Rmu_ssc0000297.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00271630 |
| rosa_rugosa | Rorug06G0445000 Rorug06G0445100 Rorug06G0445300 |
| rosa_samantha | Rh7AG047400 Rh7BG047400 Rh7BG047500 Rh7CG047700 Rh7DG046700 |
| rosa_wichuraiana | Rw0G000460 Rw0G019690 Rw7G003930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 148 |
| Acc36I | ACCTGC | 1 cut(s) | 148 |
| AccB1I | GGYRCC | 1 cut(s) | 1163 |
| AccBSI | CCGCTC | 1 cut(s) | 1189 |
| AccII | CGCG | 1 cut(s) | 1701 |
| AciI | CCGC | 7 cut(s) | 209, 905, 1052, 1055, 1189, 1559, 1699 |
| AclI | AACGTT | 1 cut(s) | 1639 |
| AcsI | RAATTY | 3 cut(s) | 574, 1407, 1616 |
| AcuI | CTGAAG | 1 cut(s) | 747 |
| AcyI | GRCGYC | 1 cut(s) | 1164 |
| AfaI | GTAC | 2 cut(s) | 254, 511 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 569, 1188, 1397, 1705 |
| AflIII | ACRYGT | 1 cut(s) | 408 |
| AgsI | TTSAA | 5 cut(s) | 10, 340, 787, 917, 1067 |
| AjnI | CCWGG | 1 cut(s) | 585 |
| AleI | CACNNNNGTG | 1 cut(s) | 409 |
| AluBI | AGCT | 6 cut(s) | 343, 353, 388, 459, 1170, 1607 |
| AluI | AGCT | 6 cut(s) | 343, 353, 388, 459, 1170, 1607 |
| Alw26I | GTCTC | 5 cut(s) | 258, 720, 1142, 1296, 1687 |
| ApeKI | GCWGC | 3 cut(s) | 350, 1379, 1486 |
| ApoI | RAATTY | 3 cut(s) | 574, 1407, 1616 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 306, 338, 816, 848 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1062 |
| AspLEI | GCGC | 2 cut(s) | 754, 1166 |
| AspS9I | GGNCC | 3 cut(s) | 185, 552, 1122 |
| AsuC2I | CCSGG | 1 cut(s) | 1820 |
| AsuHPI | GGTGA | 6 cut(s) | 26, 172, 575, 710, 1536, 1585 |
| AvaII | GGWCC | 3 cut(s) | 185, 552, 1122 |
| AxyI | CCTNAGG | 1 cut(s) | 1833 |
| BamHI | GGATCC | 2 cut(s) | 853, 1003 |
| BanI | GGYRCC | 1 cut(s) | 1163 |
| BauI | CACGAG | 3 cut(s) | 85, 261, 627 |
| BbsI | GAAGAC | 1 cut(s) | 427 |
| BbvCI | CCTCAGC | 1 cut(s) | 248 |
| BbvI | GCAGC | 3 cut(s) | 362, 1391, 1498 |
| BccI | CCATC | 5 cut(s) | 26, 626, 644, 863, 1295 |
| BceAI | ACGGC | 1 cut(s) | 1747 |
| BciT130I | CCWGG | 1 cut(s) | 587 |
| BclI | TGATCA | 1 cut(s) | 484 |
| BcnI | CCSGG | 1 cut(s) | 1820 |
| BcoDI | GTCTC | 5 cut(s) | 258, 720, 1142, 1296, 1687 |
| BfaI | CTAG | 4 cut(s) | 344, 431, 927, 1077 |
| BfmI | CTRYAG | 2 cut(s) | 138, 684 |
| BfoI | RGCGCY | 1 cut(s) | 1167 |
| BfuAI | ACCTGC | 1 cut(s) | 148 |
| BglII | AGATCT | 1 cut(s) | 271 |
| BisI | GCNGC | 4 cut(s) | 351, 1053, 1380, 1487 |
| BlsI | GCNGC | 4 cut(s) | 352, 1054, 1381, 1488 |
| Bme1390I | CCNGG | 2 cut(s) | 587, 1820 |
| Bme18I | GGWCC | 3 cut(s) | 185, 552, 1122 |
| BmgT120I | GGNCC | 3 cut(s) | 185, 552, 1122 |
| BmiI | GGNNCC | 6 cut(s) | 186, 855, 1005, 1123, 1165, 1634 |
| BmrFI | CCNGG | 2 cut(s) | 587, 1820 |
| BmsI | GCATC | 5 cut(s) | 157, 234, 1359, 1377, 1831 |
| BpiI | GAAGAC | 1 cut(s) | 427 |
| Bpu10I | CCTNAGC | 2 cut(s) | 231, 248 |
| BpuEI | CTTGAG | 3 cut(s) | 1125, 1205, 1278 |
| BpuMI | CCSGG | 1 cut(s) | 1820 |
| Bsa29I | ATCGAT | 1 cut(s) | 195 |
| BsaBI | GATNNNNATC | 1 cut(s) | 468 |
| BsaHI | GRCGYC | 1 cut(s) | 1164 |
| BsaI | GGTCTC | 3 cut(s) | 720, 1142, 1687 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 569, 1188, 1397, 1705 |
| Bse118I | RCCGGY | 1 cut(s) | 1546 |
| Bse1I | ACTGG | 1 cut(s) | 210 |
| Bse21I | CCTNAGG | 1 cut(s) | 1833 |
| Bse3DI | GCAATG | 1 cut(s) | 1414 |
| Bse8I | GATNNNNATC | 1 cut(s) | 468 |
| BseBI | CCWGG | 1 cut(s) | 587 |
| BseCI | ATCGAT | 1 cut(s) | 195 |
| BseGI | GGATG | 2 cut(s) | 1429, 1843 |
| BseJI | GATNNNNATC | 1 cut(s) | 468 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 569, 1188, 1397, 1705 |
| BseMI | GCAATG | 1 cut(s) | 1414 |
| BseMII | CTCAG | 4 cut(s) | 239, 432, 1677, 1847 |
| BseNI | ACTGG | 1 cut(s) | 210 |
| BseRI | GAGGAG | 7 cut(s) | 42, 849, 999, 1705, 1805, 1821, 1826 |
| BseXI | GCAGC | 3 cut(s) | 362, 1391, 1498 |
| BseYI | CCCAGC | 1 cut(s) | 710 |
| BsgI | GTGCAG | 2 cut(s) | 369, 1302 |
| Bsh1236I | CGCG | 1 cut(s) | 1701 |
| BshNI | GGYRCC | 1 cut(s) | 1163 |
| BshVI | ATCGAT | 1 cut(s) | 195 |
| BsiSI | CCGG | 2 cut(s) | 1547, 1819 |
| BslFI | GGGAC | 3 cut(s) | 198, 302, 1135 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 569, 1188, 1397, 1705 |
| BsmAI | GTCTC | 5 cut(s) | 258, 720, 1142, 1296, 1687 |
| BsmBI | CGTCTC | 1 cut(s) | 1296 |
| BsmFI | GGGAC | 3 cut(s) | 198, 302, 1135 |
| Bso31I | GGTCTC | 3 cut(s) | 720, 1142, 1687 |
| BspACI | CCGC | 7 cut(s) | 209, 905, 1052, 1055, 1189, 1559, 1699 |
| BspCNI | CTCAG | 4 cut(s) | 240, 433, 1678, 1846 |
| BspDI | ATCGAT | 1 cut(s) | 195 |
| BspFNI | CGCG | 1 cut(s) | 1701 |
| BspHI | TCATGA | 1 cut(s) | 1353 |
| BspLI | GGNNCC | 6 cut(s) | 186, 855, 1005, 1123, 1165, 1634 |
| BspMAI | CTGCAG | 1 cut(s) | 142 |
| BspMI | ACCTGC | 1 cut(s) | 148 |
| BspT107I | GGYRCC | 1 cut(s) | 1163 |
| BspTNI | GGTCTC | 3 cut(s) | 720, 1142, 1687 |
| BsrBI | CCGCTC | 1 cut(s) | 1189 |
| BsrDI | GCAATG | 1 cut(s) | 1414 |
| BsrFI | RCCGGY | 1 cut(s) | 1546 |
| BsrI | ACTGG | 1 cut(s) | 210 |
| BssAI | RCCGGY | 1 cut(s) | 1546 |
| BssNI | GRCGYC | 1 cut(s) | 1164 |
| BssSI | CACGAG | 3 cut(s) | 85, 261, 627 |
| Bst2BI | CACGAG | 3 cut(s) | 85, 261, 627 |
| Bst2UI | CCWGG | 1 cut(s) | 587 |
| Bst4CI | ACNGT | 5 cut(s) | 14, 832, 848, 982, 998 |
| Bst6I | CTCTTC | 4 cut(s) | 378, 1591, 1782, 1803 |
| BstACI | GRCGYC | 1 cut(s) | 1164 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 176, 1325 |
| BstC8I | GCNNGC | 4 cut(s) | 428, 958, 1168, 1199 |
| BstDEI | CTNAG | 8 cut(s) | 231, 248, 441, 548, 836, 986, 1686, 1833 |
| BstEII | GGTNACC | 1 cut(s) | 1542 |
| BstF5I | GGATG | 2 cut(s) | 1429, 1843 |
| BstFNI | CGCG | 1 cut(s) | 1701 |
| BstH2I | RGCGCY | 1 cut(s) | 1167 |
| BstHHI | GCGC | 2 cut(s) | 754, 1166 |
| BstMAI | GTCTC | 5 cut(s) | 258, 720, 1142, 1296, 1687 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 176, 680, 962, 1325 |
| BstNI | CCWGG | 1 cut(s) | 587 |
| BstNSI | RCATGY | 2 cut(s) | 412, 430 |
| BstPI | GGTNACC | 1 cut(s) | 1542 |
| BstSCI | CCNGG | 2 cut(s) | 585, 1818 |
| BstSFI | CTRYAG | 2 cut(s) | 138, 684 |
| BstUI | CGCG | 1 cut(s) | 1701 |
| BstV1I | GCAGC | 3 cut(s) | 362, 1391, 1498 |
| BstV2I | GAAGAC | 1 cut(s) | 427 |
| BstX2I | RGATCY | 4 cut(s) | 271, 479, 853, 1003 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 91, 1213 |
| BstYI | RGATCY | 4 cut(s) | 271, 479, 853, 1003 |
| Bsu15I | ATCGAT | 1 cut(s) | 195 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1833 |
| BsuTUI | ATCGAT | 1 cut(s) | 195 |
| BtsCI | GGATG | 2 cut(s) | 1429, 1843 |
| BtsI | GCAGTG | 1 cut(s) | 147 |
| BtsIMutI | CAGTG | 1 cut(s) | 147 |
| BveI | ACCTGC | 1 cut(s) | 148 |
| Cac8I | GCNNGC | 4 cut(s) | 428, 958, 1168, 1199 |
| CciI | TCATGA | 1 cut(s) | 1353 |
| CfoI | GCGC | 2 cut(s) | 754, 1166 |
| Cfr10I | RCCGGY | 1 cut(s) | 1546 |
| Cfr13I | GGNCC | 3 cut(s) | 185, 552, 1122 |
| ClaI | ATCGAT | 1 cut(s) | 195 |
| CseI | GACGC | 1 cut(s) | 432 |
| Csp6I | GTAC | 2 cut(s) | 253, 510 |
| CviAII | CATG | 8 cut(s) | 409, 427, 623, 722, 1223, 1346, 1354, 1384 |
| CviQI | GTAC | 2 cut(s) | 253, 510 |
| DdeI | CTNAG | 8 cut(s) | 231, 248, 441, 548, 836, 986, 1686, 1833 |
| DinI | GGCGCC | 1 cut(s) | 1165 |
| DraI | TTTAAA | 1 cut(s) | 1749 |
| Eam1104I | CTCTTC | 4 cut(s) | 378, 1591, 1782, 1803 |
| EarI | CTCTTC | 4 cut(s) | 378, 1591, 1782, 1803 |
| EciI | GGCGGA | 4 cut(s) | 224, 920, 1070, 1548 |
| Eco31I | GGTCTC | 3 cut(s) | 720, 1142, 1687 |
| Eco32I | GATATC | 2 cut(s) | 193, 1451 |
| Eco47I | GGWCC | 3 cut(s) | 185, 552, 1122 |
| Eco57I | CTGAAG | 1 cut(s) | 747 |
| Eco81I | CCTNAGG | 1 cut(s) | 1833 |
| Eco91I | GGTNACC | 1 cut(s) | 1542 |
| EcoO109I | RGGNCCY | 1 cut(s) | 185 |
| EcoO65I | GGTNACC | 1 cut(s) | 1542 |
| EcoRII | CCWGG | 1 cut(s) | 585 |
| EcoRV | GATATC | 2 cut(s) | 193, 1451 |
| EcoT22I | ATGCAT | 1 cut(s) | 1347 |
| EgeI | GGCGCC | 1 cut(s) | 1165 |
| EheI | GGCGCC | 1 cut(s) | 1165 |
| Esp3I | CGTCTC | 1 cut(s) | 1296 |
| FaeI | CATG | 8 cut(s) | 412, 430, 626, 725, 1226, 1349, 1357, 1387 |
| FaqI | GGGAC | 3 cut(s) | 198, 302, 1135 |
| FatI | CATG | 8 cut(s) | 408, 426, 622, 721, 1222, 1345, 1353, 1383 |
| FauI | CCCGC | 1 cut(s) | 1706 |
| FauNDI | CATATG | 1 cut(s) | 817 |
| FbaI | TGATCA | 1 cut(s) | 484 |
| Fnu4HI | GCNGC | 4 cut(s) | 351, 1053, 1380, 1487 |
| FokI | GGATG | 2 cut(s) | 1416, 1850 |
| Fsp4HI | GCNGC | 4 cut(s) | 351, 1053, 1380, 1487 |
| FspBI | CTAG | 4 cut(s) | 344, 431, 927, 1077 |
| GlaI | GCGC | 2 cut(s) | 753, 1165 |
| GluI | GCNGC | 4 cut(s) | 351, 1053, 1380, 1487 |
| GsaI | CCCAGC | 1 cut(s) | 714 |
| HaeII | RGCGCY | 1 cut(s) | 1167 |
| HapII | CCGG | 2 cut(s) | 1547, 1819 |
| HgaI | GACGC | 1 cut(s) | 432 |
| HhaI | GCGC | 2 cut(s) | 754, 1166 |
| Hin1I | GRCGYC | 1 cut(s) | 1164 |
| Hin1II | CATG | 8 cut(s) | 412, 430, 626, 725, 1226, 1349, 1357, 1387 |
| Hin6I | GCGC | 2 cut(s) | 752, 1164 |
| HinP1I | GCGC | 2 cut(s) | 752, 1164 |
| HinfI | GANTC | 8 cut(s) | 54, 80, 282, 797, 1217, 1286, 1763, 1823 |
| HpaII | CCGG | 2 cut(s) | 1547, 1819 |
| HphI | GGTGA | 6 cut(s) | 26, 172, 575, 710, 1536, 1585 |
| Hpy166II | GTNNAC | 2 cut(s) | 402, 555 |
| Hpy188I | TCNGA | 9 cut(s) | 118, 393, 484, 526, 794, 1434, 1497, 1518, 1622 |
| Hpy188III | TCNNGA | 6 cut(s) | 58, 629, 851, 1001, 1354, 1835 |
| Hpy8I | GTNNAC | 2 cut(s) | 402, 555 |
| HpyAV | CCTTC | 3 cut(s) | 926, 1076, 1572 |
| HpyCH4III | ACNGT | 5 cut(s) | 14, 832, 848, 982, 998 |
| HpyCH4IV | ACGT | 2 cut(s) | 1624, 1639 |
| HpyCH4V | TGCA | 9 cut(s) | 140, 170, 179, 350, 1156, 1319, 1345, 1372, 1486 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 176, 680, 962, 1325 |
| HpyF3I | CTNAG | 8 cut(s) | 231, 248, 441, 548, 836, 986, 1686, 1833 |
| HpySE526I | ACGT | 2 cut(s) | 1624, 1639 |
| Hsp92I | GRCGYC | 1 cut(s) | 1164 |
| Hsp92II | CATG | 8 cut(s) | 412, 430, 626, 725, 1226, 1349, 1357, 1387 |
| HspAI | GCGC | 2 cut(s) | 752, 1164 |
| KasI | GGCGCC | 1 cut(s) | 1163 |
| Ksp22I | TGATCA | 1 cut(s) | 484 |
| LmnI | GCTCC | 1 cut(s) | 619 |
| Lsp1109I | GCAGC | 3 cut(s) | 362, 1391, 1498 |
| LweI | GCATC | 5 cut(s) | 157, 234, 1359, 1377, 1831 |
| MaeI | CTAG | 4 cut(s) | 344, 431, 927, 1077 |
| MaeII | ACGT | 2 cut(s) | 1624, 1639 |
| MaeIII | GTNAC | 6 cut(s) | 71, 133, 581, 676, 1191, 1542 |
| MbiI | CCGCTC | 1 cut(s) | 1189 |
| MflI | RGATCY | 4 cut(s) | 271, 479, 853, 1003 |
| MluCI | AATT | 5 cut(s) | 213, 574, 755, 1407, 1616 |
| Mly113I | GGCGCC | 1 cut(s) | 1164 |
| MlyI | GAGTC | 3 cut(s) | 63, 806, 1757 |
| Mph1103I | ATGCAT | 1 cut(s) | 1347 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1062 |
| MseI | TTAA | 4 cut(s) | 174, 578, 1704, 1748 |
| MslI | CAYNNNNRTG | 5 cut(s) | 409, 627, 1047, 1211, 1434 |
| MspA1I | CMGCKG | 1 cut(s) | 353 |
| MspI | CCGG | 2 cut(s) | 1547, 1819 |
| MspR9I | CCNGG | 2 cut(s) | 587, 1820 |
| MvaI | CCWGG | 1 cut(s) | 587 |
| MvnI | CGCG | 1 cut(s) | 1701 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 176, 680, 962, 1325 |
| NarI | GGCGCC | 1 cut(s) | 1164 |
| NciI | CCSGG | 1 cut(s) | 1820 |
| NdeI | CATATG | 1 cut(s) | 817 |
| NlaIII | CATG | 8 cut(s) | 412, 430, 626, 725, 1226, 1349, 1357, 1387 |
| NlaIV | GGNNCC | 6 cut(s) | 186, 855, 1005, 1123, 1165, 1634 |
| NmuCI | GTSAC | 5 cut(s) | 71, 133, 581, 1191, 1542 |
| NsiI | ATGCAT | 1 cut(s) | 1347 |
| NspI | RCATGY | 2 cut(s) | 412, 430 |
| OliI | CACNNNNGTG | 1 cut(s) | 409 |
| PaeI | GCATGC | 1 cut(s) | 430 |
| PagI | TCATGA | 1 cut(s) | 1353 |
| PaqCI | CACCTGC | 1 cut(s) | 148 |
| PciI | ACATGT | 1 cut(s) | 408 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1062 |
| PfeI | GAWTC | 5 cut(s) | 80, 282, 1217, 1286, 1823 |
| PflFI | GACNNNGTC | 1 cut(s) | 314 |
| PkrI | GCNGC | 4 cut(s) | 352, 1054, 1381, 1488 |
| PleI | GAGTC | 3 cut(s) | 62, 805, 1757 |
| PluTI | GGCGCC | 1 cut(s) | 1167 |
| PpsI | GAGTC | 3 cut(s) | 62, 805, 1757 |
| PpuMI | RGGWCCY | 1 cut(s) | 185 |
| PscI | ACATGT | 1 cut(s) | 408 |
| Psp1406I | AACGTT | 1 cut(s) | 1639 |
| Psp5II | RGGWCCY | 1 cut(s) | 185 |
| Psp6I | CCWGG | 1 cut(s) | 585 |
| PspEI | GGTNACC | 1 cut(s) | 1542 |
| PspFI | CCCAGC | 1 cut(s) | 710 |
| PspGI | CCWGG | 1 cut(s) | 585 |
| PspN4I | GGNNCC | 6 cut(s) | 186, 855, 1005, 1123, 1165, 1634 |
| PspPI | GGNCC | 3 cut(s) | 185, 552, 1122 |
| PspPPI | RGGWCCY | 1 cut(s) | 185 |
| PstI | CTGCAG | 1 cut(s) | 142 |
| PsuI | RGATCY | 4 cut(s) | 271, 479, 853, 1003 |
| PsyI | GACNNNGTC | 1 cut(s) | 314 |
| PvuII | CAGCTG | 1 cut(s) | 353 |
| RsaI | GTAC | 2 cut(s) | 254, 511 |
| RsaNI | GTAC | 2 cut(s) | 253, 510 |
| RseI | CAYNNNNRTG | 5 cut(s) | 409, 627, 1047, 1211, 1434 |
| SaqAI | TTAA | 4 cut(s) | 174, 578, 1704, 1748 |
| SatI | GCNGC | 4 cut(s) | 351, 1053, 1380, 1487 |
| Sau96I | GGNCC | 3 cut(s) | 185, 552, 1122 |
| SchI | GAGTC | 3 cut(s) | 63, 806, 1757 |
| ScrFI | CCNGG | 2 cut(s) | 587, 1820 |
| SfaNI | GCATC | 5 cut(s) | 157, 234, 1359, 1377, 1831 |
| SfcI | CTRYAG | 2 cut(s) | 138, 684 |
| SfoI | GGCGCC | 1 cut(s) | 1165 |
| SinI | GGWCC | 3 cut(s) | 185, 552, 1122 |
| SmiI | ATTTAAAT | 1 cut(s) | 1749 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 409, 627, 1047, 1211, 1434 |
| SmlI | CTYRAG | 3 cut(s) | 1140, 1184, 1293 |
| SmoI | CTYRAG | 3 cut(s) | 1140, 1184, 1293 |
| SphI | GCATGC | 1 cut(s) | 430 |
| Sse9I | AATT | 5 cut(s) | 213, 574, 755, 1407, 1616 |
| SsiI | CCGC | 7 cut(s) | 209, 905, 1052, 1055, 1189, 1559, 1699 |
| SspDI | GGCGCC | 1 cut(s) | 1163 |
| SspI | AATATT | 1 cut(s) | 1255 |
| SspMI | CTAG | 4 cut(s) | 344, 431, 927, 1077 |
| StyD4I | CCNGG | 2 cut(s) | 585, 1818 |
| SwaI | ATTTAAAT | 1 cut(s) | 1749 |
| TaaI | ACNGT | 5 cut(s) | 14, 832, 848, 982, 998 |
| TaiI | ACGT | 2 cut(s) | 1627, 1642 |
| TaqI | TCGA | 3 cut(s) | 195, 302, 867 |
| TaqII | GACCGA | 1 cut(s) | 1139 |
| TasI | AATT | 5 cut(s) | 213, 574, 755, 1407, 1616 |
| TauI | GCSGC | 1 cut(s) | 1055 |
| TfiI | GAWTC | 5 cut(s) | 80, 282, 1217, 1286, 1823 |
| Tru1I | TTAA | 4 cut(s) | 174, 578, 1704, 1748 |
| Tru9I | TTAA | 4 cut(s) | 174, 578, 1704, 1748 |
| TscAI | CASTG | 1 cut(s) | 147 |
| TseFI | GTSAC | 5 cut(s) | 71, 133, 581, 1191, 1542 |
| TseI | GCWGC | 3 cut(s) | 350, 1379, 1486 |
| Tsp45I | GTSAC | 5 cut(s) | 71, 133, 581, 1191, 1542 |
| TspRI | CASTG | 1 cut(s) | 147 |
| Tth111I | GACNNNGTC | 1 cut(s) | 314 |
| VpaK11BI | GGWCC | 3 cut(s) | 185, 552, 1122 |
| XapI | RAATTY | 3 cut(s) | 574, 1407, 1616 |
| XceI | RCATGY | 2 cut(s) | 412, 430 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1062 |
| XspI | CTAG | 4 cut(s) | 344, 431, 927, 1077 |
| Zsp2I | ATGCAT | 1 cut(s) | 1347 |