Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005778

Physical Location & Seq

Genomic Coordinates Reverse (-)

65548398 .. 65558125

Gene Structure 9728 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005161

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGATCCTAAGGAGCTCAATTTGAACAAAGGACCTGAAGGCTGCGGCAGCGCCGGCGGTGGTGAGGGGTTTATAGATAGGAGCAAGGTGAGGATTTTGCTCTGCGATAACGACGAGTCCAGCTCCGAAGAAGTTCTCAGGCTTCTTTTGAAATGCTCTTATCAAGTCACTTCGGTCAAGTCTCCTCGGCAGGTGATTGATGCATTGAATGCAGAGGGACCTGATATTGATATCATACTTGCCGAAGTCGACCTTCCAATGAGAAAAGGAACGAAAATGTTGAAGTACATCACACGGCATAGAGAGTTGAGGCGCATTCCTGTGATCATGATGTCAGCACAAGATGAGGTCTCTACTGTTGTCAAGTGCCTGAGGCTTGGAGCGGCAGACTATCTTGTCAAGCCTTTACGAACTAATGAGCTTTTAAACTTGTGGACACACATGTGGAGAAGAAGACACATGCTTGGACTTGCAGAGAAGAACGTGTTTAGTTATGACTTTGATACAGTTGTATCAGATCCTAGTGATCCTAATACAAACTCATTCTCGGATGATACAGAAGAGAAGTCTCAGAAGAGTGCCAATCCAGAGATACCTGTTGCTGCTGCTACGGAGCCTCCACTGGATGATCAATTAGAGTTTCAGAGTGATGTTCCAGAAATAAGTGACCGCCAAACTGGAAAGTTTTCATCTGGCCCAAAAAAGAGCGAACTAAAGATTGGGGGGTCATCTGCCTTCTTTACCTATGTCAAATCTAGGACACTTGAAAAAAACTCCCAAGTCCGTACGAAGGATAATGGTGCTGAACGGTCAAGAGTGGAAGAGAAACACCCAGCATGTAGTCAACAAGTGGTTGATGAGTCTCTCCAAGTAGATGGAAATGGAGAAGCATGGGAAAGCTATTCACAAGAAGATGACTTTCCAACCAGTAATAGTATCCCAGATTCTCTTTCATTGGAGAGGTCTTGCACCCCACCTGGATCAATGGAACTTCAGCATCAGAAGAATAATGTGGAAGACAGATCCTCTCAGGTGCCTGCGCATCCTAGAAATGAACCTCAACACGATGTCTCTAGATTGCCTGCCCATGCTTCGTATCCCTACTATATGTCGGGGATTGTCAATCAGGTTATGGGGTCATCATCGACACAAGTGTATCAAAAGAATCTGCATGACATGCCAAATCATGCCGCAGCAGCAATTATGCCACATTACAGTCATCTTCCACACTGCCCTCCACATGTTAATGGGATGACTTCATTCTCCTACTATCCGCTTGGTATATGCTTACAACCTGGTCAAATGCCTAACAATCATTCATGGCCATCCTTTGGAAGCTCATCCGCCAGTGAAGTGAAATTAAATAAGGTTGACAGAAGAGAGGCAGCATTGATTAAATTCAGGCAGAAAAGAAAGGAGCGTTGCTTTGATAAAAAGATTAGGTATGTTAATCGAAAAAGACTTGCCGAAAGGAGGCCTCGTGTACGGGGACAATTTGTGAGGAAGGTAAATGGTGTAGATGTTGATCTCAATGGGCAACCTGCTTCTCTTGATGATGATGAGGATGACGAGGATGAGAAGGATGATGAGGAGCTTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009892 GO:0009987 GO:0010031 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032501 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048511 GO:0048519 GO:0050789 GO:0050794 GO:0050879 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

534

Amino Acids

59.93

Weight (kDa)

5.76

Isoelectric Point (pI)

51.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	32 - 143	2.6e-18	Response regulator receiver domain
CCT	PF06203	460 - 502	3e-15	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61380
fragaria_vesca	FvH4_5g14560
malus_domestica	MD06G1197300.v1.1 MD14G1204700.v1.1
prunus_persica	Prupe.5G197900_v2.0.a1 Prupe.5G198000_v2.0.a1
pyrus_communis	pycom06g17420 pycom06g17430 pycom14g16910
rosa_chinensis	RchiOBHm_Chr7g0182001
rosa_laevigata	RLG00000005156 RLG00000005161
rosa_multiflora	Rmu_co8226389.1_g000001 Rmu_sc0003511.1_g000044 Rmu_sc0017796.1_g000001 Rmu_ssc0000297.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271630
rosa_rugosa	Rorug06G0445000 Rorug06G0445100 Rorug06G0445300
rosa_samantha	Rh7AG047400 Rh7BG047400 Rh7BG047500 Rh7CG047700 Rh7DG046700
rosa_wichuraiana	Rw0G000460 Rw0G019690 Rw7G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	181
AasI	GACNNNNNNGTC	1 cut(s)	395
Acc16I	TGCGCA	1 cut(s)	1041
Acc36I	ACCTGC	2 cut(s)	181, 1549
AccB1I	GGYRCC	1 cut(s)	1033
AccB7I	CCANNNNNTGG	1 cut(s)	1331
AccBSI	CCGCTC	1 cut(s)	383
AccI	GTMKAC	1 cut(s)	249
AciI	CCGC	7 cut(s)	45, 57, 383, 670, 1191, 1274, 1344
AclWI	GGATC	5 cut(s)	12, 512, 521, 988, 1017
AcoI	YGGCCR	1 cut(s)	1322
AcsI	RAATTY	1 cut(s)	1397
AcuI	CTGAAG	2 cut(s)	57, 977
AfaI	GTAC	3 cut(s)	287, 787, 1485
AfiI	CCNNNNNNNGG	3 cut(s)	790, 1331, 1473
AflIII	ACRYGT	3 cut(s)	441, 483, 1240
AgsI	TTSAA	5 cut(s)	25, 151, 208, 283, 767
AjnI	CCWGG	2 cut(s)	976, 1294
AjuI	GAANNNNNNNTTGG	2 cut(s)	702, 734
AleI	CACNNNNGTG	1 cut(s)	442
AluBI	AGCT	6 cut(s)	16, 123, 421, 900, 1338, 1594
AluI	AGCT	6 cut(s)	16, 123, 421, 900, 1338, 1594
Alw21I	GWGCWC	1 cut(s)	18
Alw26I	GTCTC	5 cut(s)	186, 355, 573, 867, 1075
AlwI	GGATC	5 cut(s)	12, 512, 521, 988, 1017
AoxI	GGCC	3 cut(s)	694, 1322, 1475
ApeKI	GCWGC	7 cut(s)	42, 48, 602, 605, 1193, 1196, 1385
ApoI	RAATTY	1 cut(s)	1397
Asp700I	GAANNNNTTC	2 cut(s)	132, 685
AspLEI	GCGC	3 cut(s)	53, 315, 1042
AspS9I	GGNCC	3 cut(s)	32, 218, 695
AsuHPI	GGTGA	3 cut(s)	74, 100, 205
AvaII	GGWCC	2 cut(s)	32, 218
AxyI	CCTNAGG	2 cut(s)	9, 371
BaeI	ACNNNNGTAYC	6 cut(s)	495, 495, 528, 528, 1139, 1172
BalI	TGGCCA	1 cut(s)	1324
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	1 cut(s)	1033
BanII	GRGCYC	1 cut(s)	18
BauI	CACGAG	1 cut(s)	1479
BbsI	GAAGAC	2 cut(s)	460, 1023
Bbv12I	GWGCWC	1 cut(s)	18
BbvI	GCAGC	7 cut(s)	29, 60, 589, 592, 1205, 1208, 1397
BccI	CCATC	2 cut(s)	869, 1333
BceAI	ACGGC	1 cut(s)	311
BciT130I	CCWGG	2 cut(s)	978, 1296
BciVI	GTATCC	2 cut(s)	947, 1107
BclI	TGATCA	2 cut(s)	324, 628
BcoDI	GTCTC	5 cut(s)	186, 355, 573, 867, 1075
BfaI	CTAG	4 cut(s)	522, 756, 1047, 1074
BfoI	RGCGCY	1 cut(s)	54
BfuAI	ACCTGC	2 cut(s)	181, 1549
BfuI	GTATCC	2 cut(s)	947, 1107
Bme1390I	CCNGG	2 cut(s)	978, 1296
Bme18I	GGWCC	2 cut(s)	32, 218
BmgT120I	GGNCC	3 cut(s)	32, 218, 695
BmiI	GGNNCC	4 cut(s)	6, 219, 615, 1035
BmrFI	CCNGG	2 cut(s)	978, 1296
BmsI	GCATC	3 cut(s)	190, 1006, 1051
BpiI	GAAGAC	2 cut(s)	460, 1023
BplI	GAGNNNNNCTC	2 cut(s)	107, 139
BsaBI	GATNNNNATC	1 cut(s)	1524
BsaI	GGTCTC	1 cut(s)	355
BsaJI	CCNNGG	1 cut(s)	185
BsaXI	ACNNNNNCTCC	5 cut(s)	601, 631, 1465, 1495, 1583
Bsc4I	CCNNNNNNNGG	3 cut(s)	790, 1331, 1473
Bse118I	RCCGGY	1 cut(s)	53
Bse1I	ACTGG	4 cut(s)	627, 682, 927, 1347
Bse21I	CCTNAGG	2 cut(s)	9, 371
Bse8I	GATNNNNATC	1 cut(s)	1524
BseBI	CCWGG	2 cut(s)	978, 1296
BseDI	CCNNGG	1 cut(s)	185
BseGI	GGATG	9 cut(s)	556, 631, 1042, 1257, 1325, 1340, 1570, 1579, 1588
BseJI	GATNNNNATC	1 cut(s)	1524
BseLI	CCNNNNNNNGG	3 cut(s)	790, 1331, 1473
BseMII	CTCAG	4 cut(s)	151, 362, 584, 1043
BseNI	ACTGG	4 cut(s)	627, 682, 927, 1347
BseRI	GAGGAG	1 cut(s)	174
BseXI	GCAGC	7 cut(s)	29, 60, 589, 592, 1205, 1208, 1397
BseYI	CCCAGC	1 cut(s)	832
BshFI	GGCC	3 cut(s)	696, 1324, 1477
BshNI	GGYRCC	1 cut(s)	1033
BsiHKAI	GWGCWC	1 cut(s)	18
BsiSI	CCGG	1 cut(s)	54
BsiWI	CGTACG	1 cut(s)	785
BslFI	GGGAC	2 cut(s)	231, 1503
BslI	CCNNNNNNNGG	3 cut(s)	790, 1331, 1473
BsmAI	GTCTC	5 cut(s)	186, 355, 573, 867, 1075
BsmFI	GGGAC	2 cut(s)	231, 1503
BsmI	GAATGC	2 cut(s)	214, 315
BsnI	GGCC	3 cut(s)	696, 1324, 1477
Bso31I	GGTCTC	1 cut(s)	355
Bsp1286I	GDGCHC	1 cut(s)	18
Bsp143I	GATC	8 cut(s)	4, 324, 517, 526, 628, 980, 1022, 1525
BspACI	CCGC	7 cut(s)	45, 57, 383, 670, 1191, 1274, 1344
BspANI	GGCC	3 cut(s)	696, 1324, 1477
BspCNI	CTCAG	4 cut(s)	150, 363, 583, 1042
BspHI	TCATGA	1 cut(s)	327
BspLI	GGNNCC	4 cut(s)	6, 219, 615, 1035
BspMI	ACCTGC	2 cut(s)	181, 1549
BspPI	GGATC	5 cut(s)	12, 512, 521, 988, 1017
BspT107I	GGYRCC	1 cut(s)	1033
BspTNI	GGTCTC	1 cut(s)	355
BsrBI	CCGCTC	1 cut(s)	383
BsrFI	RCCGGY	1 cut(s)	53
BsrI	ACTGG	4 cut(s)	627, 682, 927, 1347
BssAI	RCCGGY	1 cut(s)	53
BssECI	CCNNGG	1 cut(s)	185
BssMI	GATC	8 cut(s)	4, 324, 517, 526, 628, 980, 1022, 1525
BssSI	CACGAG	1 cut(s)	1479
Bst2BI	CACGAG	1 cut(s)	1479
Bst2UI	CCWGG	2 cut(s)	978, 1296
Bst4CI	ACNGT	4 cut(s)	358, 508, 810, 1217
Bst6I	CTCTTC	4 cut(s)	555, 569, 816, 1372
BstAPI	GCANNNNNTGC	2 cut(s)	209, 1177
BstC8I	GCNNGC	4 cut(s)	55, 1038, 1083, 1596
BstDEI	CTNAG	5 cut(s)	9, 137, 371, 570, 1029
BstF5I	GGATG	9 cut(s)	556, 631, 1042, 1257, 1325, 1340, 1570, 1579, 1588
BstH2I	RGCGCY	1 cut(s)	54
BstHHI	GCGC	3 cut(s)	53, 315, 1042
BstKTI	GATC	8 cut(s)	7, 327, 520, 529, 631, 983, 1025, 1528
BstMAI	GTCTC	5 cut(s)	186, 355, 573, 867, 1075
BstMBI	GATC	8 cut(s)	4, 324, 517, 526, 628, 980, 1022, 1525
BstMWI	GCNNNNNNNGC	5 cut(s)	48, 54, 209, 1177, 1196
BstNI	CCWGG	2 cut(s)	978, 1296
BstNSI	RCATGY	5 cut(s)	445, 463, 840, 1180, 1244
BstSCI	CCNGG	2 cut(s)	976, 1294
BstV1I	GCAGC	7 cut(s)	29, 60, 589, 592, 1205, 1208, 1397
BstV2I	GAAGAC	2 cut(s)	460, 1023
BstX2I	RGATCY	3 cut(s)	4, 517, 1022
BstXI	CCANNNNNNTGG	1 cut(s)	875
BstYI	RGATCY	3 cut(s)	4, 517, 1022
Bsu36I	CCTNAGG	2 cut(s)	9, 371
BsuI	GTATCC	2 cut(s)	947, 1107
BsuRI	GGCC	3 cut(s)	696, 1324, 1477
BtsCI	GGATG	9 cut(s)	556, 631, 1042, 1257, 1325, 1340, 1570, 1579, 1588
BtsI	GCAGTG	1 cut(s)	1228
BtsIMutI	CAGTG	3 cut(s)	620, 1228, 1354
BveI	ACCTGC	2 cut(s)	181, 1549
Cac8I	GCNNGC	4 cut(s)	55, 1038, 1083, 1596
CciI	TCATGA	1 cut(s)	327
CfoI	GCGC	3 cut(s)	53, 315, 1042
Cfr10I	RCCGGY	1 cut(s)	53
Cfr13I	GGNCC	3 cut(s)	32, 218, 695
CsiI	ACCWGGT	1 cut(s)	1294
Csp6I	GTAC	3 cut(s)	286, 786, 1484
CviQI	GTAC	3 cut(s)	286, 786, 1484
DdeI	CTNAG	5 cut(s)	9, 137, 371, 570, 1029
DpnI	GATC	8 cut(s)	6, 326, 519, 528, 630, 982, 1024, 1527
DpnII	GATC	8 cut(s)	4, 324, 517, 526, 628, 980, 1022, 1525
DraI	TTTAAA	1 cut(s)	426
DrdI	GACNNNNNNGTC	1 cut(s)	395
DseDI	GACNNNNNNGTC	1 cut(s)	395
EaeI	YGGCCR	1 cut(s)	1322
Eam1104I	CTCTTC	4 cut(s)	555, 569, 816, 1372
EarI	CTCTTC	4 cut(s)	555, 569, 816, 1372
EciI	GGCGGA	1 cut(s)	1333
Ecl136II	GAGCTC	1 cut(s)	16
Eco147I	AGGCCT	1 cut(s)	1477
Eco24I	GRGCYC	1 cut(s)	18
Eco31I	GGTCTC	1 cut(s)	355
Eco32I	GATATC	1 cut(s)	232
Eco47I	GGWCC	2 cut(s)	32, 218
Eco53kI	GAGCTC	1 cut(s)	16
Eco57I	CTGAAG	2 cut(s)	57, 977
Eco81I	CCTNAGG	2 cut(s)	9, 371
EcoICRI	GAGCTC	1 cut(s)	16
EcoO109I	RGGNCCY	2 cut(s)	32, 218
EcoRII	CCWGG	2 cut(s)	976, 1294
EcoRV	GATATC	1 cut(s)	232
EcoT22I	ATGCAT	1 cut(s)	205
EcoT38I	GRGCYC	1 cut(s)	18
FalI	AAGNNNNNCTT	2 cut(s)	237, 269
FaqI	GGGAC	2 cut(s)	231, 1503
FbaI	TGATCA	2 cut(s)	324, 628
FblI	GTMKAC	1 cut(s)	249
FokI	GGATG	9 cut(s)	563, 638, 1029, 1264, 1312, 1327, 1577, 1586, 1595
FriOI	GRGCYC	1 cut(s)	18
FspBI	CTAG	4 cut(s)	522, 756, 1047, 1074
FspI	TGCGCA	1 cut(s)	1041
GlaI	GCGC	3 cut(s)	52, 314, 1041
GsaI	CCCAGC	1 cut(s)	836
HaeII	RGCGCY	1 cut(s)	54
HaeIII	GGCC	3 cut(s)	696, 1324, 1477
HapII	CCGG	1 cut(s)	54
HhaI	GCGC	3 cut(s)	53, 315, 1042
Hin6I	GCGC	3 cut(s)	51, 313, 1040
HinP1I	GCGC	3 cut(s)	51, 313, 1040
HincII	GTYRAC	3 cut(s)	250, 845, 1372
HindII	GTYRAC	3 cut(s)	250, 845, 1372
HinfI	GANTC	4 cut(s)	116, 860, 944, 1165
HpaII	CCGG	1 cut(s)	54
HphI	GGTGA	3 cut(s)	74, 100, 205
Hpy166II	GTNNAC	5 cut(s)	250, 435, 845, 1372, 1484
Hpy188I	TCNGA	6 cut(s)	127, 517, 550, 573, 645, 1002
Hpy188III	TCNNGA	6 cut(s)	328, 587, 656, 813, 1074, 1550
Hpy8I	GTNNAC	5 cut(s)	250, 435, 845, 1372, 1484
Hpy99I	CGWCG	1 cut(s)	116
HpyAV	CCTTC	6 cut(s)	32, 263, 745, 784, 1498, 1573
HpyCH4III	ACNGT	4 cut(s)	358, 508, 810, 1217
HpyCH4IV	ACGT	1 cut(s)	483
HpyCH4V	TGCA	5 cut(s)	203, 212, 473, 969, 1171
HpyF10VI	GCNNNNNNNGC	5 cut(s)	48, 54, 209, 1177, 1196
HpyF3I	CTNAG	5 cut(s)	9, 137, 371, 570, 1029
HpySE526I	ACGT	1 cut(s)	483
HspAI	GCGC	3 cut(s)	51, 313, 1040
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
Ksp22I	TGATCA	2 cut(s)	324, 628
Kzo9I	GATC	8 cut(s)	4, 324, 517, 526, 628, 980, 1022, 1525
LmnI	GCTCC	7 cut(s)	13, 81, 128, 380, 613, 1417, 1591
Lsp1109I	GCAGC	7 cut(s)	29, 60, 589, 592, 1205, 1208, 1397
LweI	GCATC	3 cut(s)	190, 1006, 1051
MabI	ACCWGGT	1 cut(s)	1294
MaeI	CTAG	4 cut(s)	522, 756, 1047, 1074
MaeII	ACGT	1 cut(s)	483
MaeIII	GTNAC	2 cut(s)	166, 665
MalI	GATC	8 cut(s)	6, 326, 519, 528, 630, 982, 1024, 1527
MbiI	CCGCTC	1 cut(s)	383
MboI	GATC	8 cut(s)	4, 324, 517, 526, 628, 980, 1022, 1525
MflI	RGATCY	3 cut(s)	4, 517, 1022
MhlI	GDGCHC	1 cut(s)	18
MlsI	TGGCCA	1 cut(s)	1324
MluCI	AATT	6 cut(s)	19, 632, 1200, 1358, 1397, 1493
MluNI	TGGCCA	1 cut(s)	1324
MlyI	GAGTC	2 cut(s)	125, 869
MmeI	TCCRAC	1 cut(s)	947
Mox20I	TGGCCA	1 cut(s)	1324
Mph1103I	ATGCAT	1 cut(s)	205
MreI	CGCCGGCG	1 cut(s)	53
MroNI	GCCGGC	1 cut(s)	53
MroXI	GAANNNNTTC	2 cut(s)	132, 685
MscI	TGGCCA	1 cut(s)	1324
MseI	TTAA	5 cut(s)	425, 1245, 1361, 1395, 1449
MslI	CAYNNNNRTG	3 cut(s)	320, 442, 1245
Msp20I	TGGCCA	1 cut(s)	1324
MspI	CCGG	1 cut(s)	54
MspR9I	CCNGG	2 cut(s)	978, 1296
Mva1269I	GAATGC	2 cut(s)	214, 315
MvaI	CCWGG	2 cut(s)	978, 1296
MwoI	GCNNNNNNNGC	5 cut(s)	48, 54, 209, 1177, 1196
NaeI	GCCGGC	1 cut(s)	55
NdeII	GATC	8 cut(s)	4, 324, 517, 526, 628, 980, 1022, 1525
NgoMIV	GCCGGC	1 cut(s)	53
NlaIV	GGNNCC	4 cut(s)	6, 219, 615, 1035
NmeAIII	GCCGAG	1 cut(s)	166
NmuCI	GTSAC	2 cut(s)	166, 665
NsbI	TGCGCA	1 cut(s)	1041
NsiI	ATGCAT	1 cut(s)	205
NspI	RCATGY	5 cut(s)	445, 463, 840, 1180, 1244
OliI	CACNNNNGTG	1 cut(s)	442
PagI	TCATGA	1 cut(s)	327
PaqCI	CACCTGC	1 cut(s)	181
PceI	AGGCCT	1 cut(s)	1477
PciI	ACATGT	2 cut(s)	441, 1240
PctI	GAATGC	2 cut(s)	214, 315
PdiI	GCCGGC	1 cut(s)	55
PdmI	GAANNNNTTC	2 cut(s)	132, 685
PfeI	GAWTC	2 cut(s)	944, 1165
Pfl23II	CGTACG	1 cut(s)	785
PflMI	CCANNNNNTGG	1 cut(s)	1331
PleI	GAGTC	2 cut(s)	124, 868
PpsI	GAGTC	2 cut(s)	124, 868
PpuMI	RGGWCCY	2 cut(s)	32, 218
PscI	ACATGT	2 cut(s)	441, 1240
Psp124BI	GAGCTC	1 cut(s)	18
Psp5II	RGGWCCY	2 cut(s)	32, 218
Psp6I	CCWGG	2 cut(s)	976, 1294
PspFI	CCCAGC	1 cut(s)	832
PspGI	CCWGG	2 cut(s)	976, 1294
PspLI	CGTACG	1 cut(s)	785
PspN4I	GGNNCC	4 cut(s)	6, 219, 615, 1035
PspPI	GGNCC	3 cut(s)	32, 218, 695
PspPPI	RGGWCCY	2 cut(s)	32, 218
PsuI	RGATCY	3 cut(s)	4, 517, 1022
RsaI	GTAC	3 cut(s)	287, 787, 1485
RsaNI	GTAC	3 cut(s)	286, 786, 1484
RseI	CAYNNNNRTG	3 cut(s)	320, 442, 1245
SacI	GAGCTC	1 cut(s)	18
SalI	GTCGAC	1 cut(s)	248
SaqAI	TTAA	5 cut(s)	425, 1245, 1361, 1395, 1449
Sau3AI	GATC	8 cut(s)	4, 324, 517, 526, 628, 980, 1022, 1525
Sau96I	GGNCC	3 cut(s)	32, 218, 695
SchI	GAGTC	2 cut(s)	125, 869
ScrFI	CCNGG	2 cut(s)	978, 1296
SduI	GDGCHC	1 cut(s)	18
SexAI	ACCWGGT	1 cut(s)	1294
SfaNI	GCATC	3 cut(s)	190, 1006, 1051
SgrAI	CRCCGGYG	1 cut(s)	53
SinI	GGWCC	2 cut(s)	32, 218
SmiMI	CAYNNNNRTG	3 cut(s)	320, 442, 1245
Sse9I	AATT	6 cut(s)	19, 632, 1200, 1358, 1397, 1493
SseBI	AGGCCT	1 cut(s)	1477
SsiI	CCGC	7 cut(s)	45, 57, 383, 670, 1191, 1274, 1344
SspMI	CTAG	4 cut(s)	522, 756, 1047, 1074
SstI	GAGCTC	1 cut(s)	18
StuI	AGGCCT	1 cut(s)	1477
StyD4I	CCNGG	2 cut(s)	976, 1294
TaaI	ACNGT	4 cut(s)	358, 508, 810, 1217
TaiI	ACGT	1 cut(s)	486
TaqI	TCGA	3 cut(s)	249, 1145, 1453
TaqII	GACCGA	1 cut(s)	163
TasI	AATT	6 cut(s)	19, 632, 1200, 1358, 1397, 1493
TatI	WGTACW	1 cut(s)	285
TauI	GCSGC	3 cut(s)	48, 386, 1193
TfiI	GAWTC	2 cut(s)	944, 1165
Tru1I	TTAA	5 cut(s)	425, 1245, 1361, 1395, 1449
Tru9I	TTAA	5 cut(s)	425, 1245, 1361, 1395, 1449
TscAI	CASTG	3 cut(s)	627, 1235, 1354
TseFI	GTSAC	2 cut(s)	166, 665
TseI	GCWGC	7 cut(s)	42, 48, 602, 605, 1193, 1196, 1385
Tsp45I	GTSAC	2 cut(s)	166, 665
TspDTI	ATGAA	5 cut(s)	678, 942, 1068, 1248, 1308
TspGWI	ACGGA	2 cut(s)	626, 773
TspRI	CASTG	3 cut(s)	627, 1235, 1354
Van91I	CCANNNNNTGG	1 cut(s)	1331
VpaK11BI	GGWCC	2 cut(s)	32, 218
XapI	RAATTY	1 cut(s)	1397
XbaI	TCTAGA	1 cut(s)	1073
XceI	RCATGY	5 cut(s)	445, 463, 840, 1180, 1244
XmiI	GTMKAC	1 cut(s)	249
XmnI	GAANNNNTTC	2 cut(s)	132, 685
XspI	CTAG	4 cut(s)	522, 756, 1047, 1074
Zsp2I	ATGCAT	1 cut(s)	205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.