Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005778

Physical Location & Seq

Genomic Coordinates Reverse (-)

57640092 .. 57644309

Gene Structure 4218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0445300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGGCTTCCAAATCCAGATTCAACCTCATAGACGACGACGACGATTTCCAAACCCCTCTGACCCAAACCGCCACAGCTCGCACGCCCTTCAAAAAGCCCAAGCTGCTCTCCGGCAAAGAAAACGTTCCTCCTCCGCTTTGCTTCACCCCCAGAGACTACTCCATTTTGAACCAAACCCAGGTCTCCAAATCCACGCCAATCGAAGATTGCAGCTTGGATTCGCTGCCTGAAAGCCTCGACTGGGGTGAGGAAAATGAGAAAGGGCAAGGGGGGTATTTGCGGAATTCGATAGAGTCTAGGTTGATTAAGCCCGGAGCCGATTGGGGTTTTGGTTCTGGTAATGGCGAGGAGATTGATGTGCTGCTGAGGCTGAATGGGATTGAGGAAGAAGGGGAAGGAATTGTTGAGGATGAAAATGGGGGTTTGGTGGTTCAGTGCCCTCTATGTGAGATTGACATTTCTGAGCTGAGCAATGAAGAAAGACAGCTCCACACTAATGATTGTCTTGACAAACAACAAGTTCGACCTGTAGACGAACAAGAGAGGGGGTCTGGAATTGCTCATCATCCGATGGGGCCTCGAGTTTCTGGGCAAGTTGTTGAGTGGCTACGCGGTCTTGGTTTAGACAAGTATGTGGAAGTTTTTATAAGGGAAGAGATTGATTGGGATGCTCTACATTGGCTCACACAAGAGGATTTGTTTAACATTGGCATTACGGCACTTGGTCCACGTAAGAAGATTGTGCATGCACTCGCTCAACTTGGACAAGGGACTAGCAGTGGAATTGAAGCACAAACTGCACAGCCAACAAAAAGGAGTGCCAATGGGGTCGAGGTGCTCGATGATGCATTGGAAGGAACAGTTGGTGATAGTAGTAAATCAGCTTCAAACAAGTTGATTACGGATTACTTTCCGGGATTTGGTGGTGCTAGGAAGCAGCTCTGCACCACCTCCAGAGAACAGCAAAGGGTAGAAAAGCGTCAGTCAGGTGCTGGTCGTAAACGTGTTGTGGTGAAAAATCATGCCACAAATAGGAAACTCAGGGATGTTCCCTCATGGTGTTGTGTACCAGGAACACCATTTCGAGTAGATGCTTTTAAATATCTTAGACGGGATTGTTCTCATTGGTTTCTCACTCACTTTCATATGGACCATTATCAAGGTTTAACAAAGTCCTTTTGTCATGGAAAGATCTATTGCTCCTCCATTACAGCTAAGCTTGTAAACATGAAGCTTGGCATTCCATGGGACAGTATACAAGTTGTACCCCTCAACCGAAAGATCAATATTGCAGGTATTGATGTCACCTGCTTGGATGCAAACCACTGCCCTGGTTCCATAATTATACTTTTTGAACCGCCTAACAGTAAGGCTGTTCTACATACAGGGGACTTTCGCTTTAGTGAGGATGCAGCAAGCATGACTGTTTTGCGAACATCTTCTATTCATACGCTCATCCTTGATACCACTTACTGTAACCCACAGTATGACTTTCCAAAGCAGGAGGCTGTAATTCAGTTTGTCGTTGATGCAATTCAAGCTGAAACTTTCAATCCTAAAACTCTATTTCTGATTGGCAGCTACACAATTGGAAAGGAACGCCTTTACTTGGAGGTTGCTCGTGTGCTCCGGAAAAAGATTTATGTCACTGCTGGAAAGCTGCATATTTTAAAATGTTTGGATTTTCCTGAGGAGGATATGCAGTGGTTTACATTAAACGAACATGAAAGCCAAATTCATGTGGTGCCAATGTGGACACTGGCAAGCTTCAAGCGACTGAAGCATGTATCAAATCAATATGAGAGTCGATACAGTCTTATTGTTGCTTTCTCTCCAACTGGTTGGACTTTTGGTAAAGGAAAGAAGAAGTCTCCTGGAAGAAGGTGGCAGCAGGGTACCATTATAAGGTATGAGGTGCCATATAGTGAGCATTCGAGCTTTACAGAACTCAGACAGTTTGTGAAGTTTGTGTCCCCTGTACAAATAATACCAAGTGTGAACAATCATGGCCCAGATTCAGCGAATTCCATGATTTCTCTTCTCTCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009892 GO:0009987 GO:0010031 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032501 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048511 GO:0048519 GO:0050789 GO:0050794 GO:0050879 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

683

Amino Acids

76.69

Weight (kDa)

6.39

Isoelectric Point (pI)

38.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAM_2	PF07647	197 - 253	6.4e-11	SAM domain (Sterile alpha motif)
SAM_1	PF00536	198 - 254	4.6e-16	SAM domain (Sterile alpha motif)
DRMBL	PF07522	566 - 669	5.5e-27	DNA repair metallo-beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61380
fragaria_vesca	FvH4_5g14560
malus_domestica	MD06G1197300.v1.1 MD14G1204700.v1.1
prunus_persica	Prupe.5G197900_v2.0.a1 Prupe.5G198000_v2.0.a1
pyrus_communis	pycom06g17420 pycom06g17430 pycom14g16910
rosa_chinensis	RchiOBHm_Chr7g0182001
rosa_laevigata	RLG00000005156 RLG00000005161
rosa_multiflora	Rmu_co8226389.1_g000001 Rmu_sc0003511.1_g000044 Rmu_sc0017796.1_g000001 Rmu_ssc0000297.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271630
rosa_rugosa	Rorug06G0445000 Rorug06G0445100 Rorug06G0445300
rosa_samantha	Rh7AG047400 Rh7BG047400 Rh7BG047500 Rh7CG047700 Rh7DG046700
rosa_wichuraiana	Rw0G000460 Rw0G019690 Rw7G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	647, 1904
AarI	CACCTGC	1 cut(s)	1316
Acc36I	ACCTGC	2 cut(s)	1283, 1316
Acc65I	GGTACC	1 cut(s)	1895
AccB1I	GGYRCC	3 cut(s)	1744, 1895, 1915
AccI	GTMKAC	2 cut(s)	531, 1255
AccII	CGCG	1 cut(s)	612
AccIII	TCCGGA	1 cut(s)	1629
AciI	CCGC	5 cut(s)	69, 134, 280, 612, 1358
AclI	AACGTT	1 cut(s)	123
AcsI	RAATTY	3 cut(s)	283, 1734, 2023
AcuI	CTGAAG	1 cut(s)	1799
AfaI	GTAC	4 cut(s)	1068, 1266, 1897, 1980
AfiI	CCNNNNNNNGG	6 cut(s)	178, 241, 920, 1032, 1609, 1905
AflIII	ACRYGT	1 cut(s)	1003
AgsI	TTSAA	9 cut(s)	22, 91, 169, 788, 888, 1355, 1538, 1552, 1771
AjnI	CCWGG	4 cut(s)	177, 1069, 1330, 1873
AjuI	GAANNNNNNNTTGG	3 cut(s)	34, 846, 878
Alw21I	GWGCWC	2 cut(s)	840, 1629
Alw26I	GTCTC	3 cut(s)	147, 187, 1875
AlwNI	CAGNNNCTG	1 cut(s)	992
Ama87I	CYCGRG	1 cut(s)	579
Aor13HI	TCCGGA	1 cut(s)	1629
AoxI	GGCC	2 cut(s)	575, 2008
ApeKI	GCWGC	9 cut(s)	103, 210, 223, 361, 937, 1412, 1578, 1660, 1888
ApoI	RAATTY	3 cut(s)	283, 1734, 2023
Asp700I	GAANNNNTTC	2 cut(s)	123, 1438
Asp718I	GGTACC	1 cut(s)	1895
AspS9I	GGNCC	4 cut(s)	575, 725, 1150, 2009
AsuC2I	CCSGG	2 cut(s)	312, 915
AsuHPI	GGTGA	5 cut(s)	136, 257, 878, 1024, 1297
AvaI	CYCGRG	1 cut(s)	579
AvaII	GGWCC	2 cut(s)	725, 1150
AxyI	CCTNAGG	1 cut(s)	1689
BaeGI	GKGCMC	1 cut(s)	440
BanI	GGYRCC	3 cut(s)	1744, 1895, 1915
BarI	GAAGNNNNNNTAC	2 cut(s)	868, 900
BauI	CACGAG	1 cut(s)	1620
Bbv12I	GWGCWC	2 cut(s)	840, 1629
BbvCI	CCTCAGC	1 cut(s)	365
BbvI	GCAGC	9 cut(s)	90, 210, 222, 348, 949, 1424, 1590, 1647, 1900
BccI	CCATC	1 cut(s)	565
BceAI	ACGGC	1 cut(s)	732
BciT130I	CCWGG	4 cut(s)	179, 1071, 1332, 1875
BcnI	CCSGG	2 cut(s)	312, 915
BcoDI	GTCTC	3 cut(s)	147, 187, 1875
BfaI	CTAG	3 cut(s)	297, 774, 930
BfmI	CTRYAG	1 cut(s)	528
BfuAI	ACCTGC	2 cut(s)	1283, 1316
BglII	AGATCT	1 cut(s)	1191
BisI	GCNGC	9 cut(s)	104, 211, 224, 362, 938, 1413, 1579, 1661, 1889
BlpI	GCTNAGC	2 cut(s)	467, 1215
BlsI	GCNGC	9 cut(s)	105, 212, 225, 363, 939, 1414, 1580, 1662, 1890
Bme1390I	CCNGG	6 cut(s)	179, 312, 915, 1071, 1332, 1875
Bme18I	GGWCC	2 cut(s)	725, 1150
BmeT110I	CYCGRG	1 cut(s)	579
BmgT120I	GGNCC	4 cut(s)	575, 725, 1150, 2009
BmiI	GGNNCC	6 cut(s)	316, 576, 1336, 1746, 1897, 1917
BmrFI	CCNGG	6 cut(s)	179, 312, 915, 1071, 1332, 1875
BmrI	ACTGGG	1 cut(s)	250
BmsI	GCATC	6 cut(s)	658, 835, 1081, 1306, 1399, 1519
BmuI	ACTGGG	1 cut(s)	250
BpmI	CTGGAG	1 cut(s)	937
Bpu10I	CCTNAGC	1 cut(s)	365
Bpu1102I	GCTNAGC	2 cut(s)	467, 1215
BpuMI	CCSGG	2 cut(s)	312, 915
BsaAI	YACGTR	1 cut(s)	731
BsaI	GGTCTC	1 cut(s)	187
BsaJI	CCNNGG	3 cut(s)	177, 1244, 1330
BsaWI	WCCGGW	1 cut(s)	1629
Bsc4I	CCNNNNNNNGG	6 cut(s)	178, 241, 920, 1032, 1609, 1905
Bse1I	ACTGG	3 cut(s)	245, 1764, 1843
Bse21I	CCTNAGG	1 cut(s)	1689
Bse3DI	GCAATG	1 cut(s)	478
BseAI	TCCGGA	1 cut(s)	1629
BseBI	CCWGG	4 cut(s)	179, 1071, 1332, 1875
BseDI	CCNNGG	3 cut(s)	177, 1244, 1330
BseGI	GGATG	7 cut(s)	415, 565, 673, 1051, 1321, 1414, 1455
BseLI	CCNNNNNNNGG	6 cut(s)	178, 241, 920, 1032, 1609, 1905
BseMI	GCAATG	1 cut(s)	478
BseMII	CTCAG	6 cut(s)	356, 453, 458, 1054, 1680, 1963
BseNI	ACTGG	3 cut(s)	245, 1764, 1843
BseRI	GAGGAG	4 cut(s)	120, 362, 1192, 1706
BseSI	GKGCMC	1 cut(s)	440
BseXI	GCAGC	9 cut(s)	90, 210, 222, 348, 949, 1424, 1590, 1647, 1900
BsgI	GTGCAG	2 cut(s)	783, 928
Bsh1236I	CGCG	1 cut(s)	612
BshFI	GGCC	2 cut(s)	577, 2010
BshNI	GGYRCC	3 cut(s)	1744, 1895, 1915
BsiHKAI	GWGCWC	2 cut(s)	840, 1629
BsiHKCI	CYCGRG	1 cut(s)	579
BsiSI	CCGG	4 cut(s)	111, 312, 914, 1630
BslFI	GGGAC	4 cut(s)	784, 1262, 1403, 1957
BslI	CCNNNNNNNGG	6 cut(s)	178, 241, 920, 1032, 1609, 1905
BsmAI	GTCTC	3 cut(s)	147, 187, 1875
BsmFI	GGGAC	4 cut(s)	784, 1262, 1403, 1957
BsmI	GAATGC	2 cut(s)	1239, 1930
BsnI	GGCC	2 cut(s)	577, 2010
Bso31I	GGTCTC	1 cut(s)	187
BsoBI	CYCGRG	1 cut(s)	579
Bsp1286I	GDGCHC	3 cut(s)	440, 840, 1629
Bsp13I	TCCGGA	1 cut(s)	1629
Bsp1407I	TGTACA	1 cut(s)	1978
Bsp143I	GATC	2 cut(s)	1191, 1281
Bsp1720I	GCTNAGC	2 cut(s)	467, 1215
Bsp19I	CCATGG	1 cut(s)	1244
BspACI	CCGC	5 cut(s)	69, 134, 280, 612, 1358
BspANI	GGCC	2 cut(s)	577, 2010
BspCNI	CTCAG	6 cut(s)	357, 454, 459, 1053, 1681, 1962
BspEI	TCCGGA	1 cut(s)	1629
BspFNI	CGCG	1 cut(s)	612
BspLI	GGNNCC	6 cut(s)	316, 576, 1336, 1746, 1897, 1917
BspMI	ACCTGC	2 cut(s)	1283, 1316
BspT107I	GGYRCC	3 cut(s)	1744, 1895, 1915
BspTNI	GGTCTC	1 cut(s)	187
BsrDI	GCAATG	1 cut(s)	478
BsrGI	TGTACA	1 cut(s)	1978
BsrI	ACTGG	3 cut(s)	245, 1764, 1843
BssECI	CCNNGG	3 cut(s)	177, 1244, 1330
BssMI	GATC	2 cut(s)	1191, 1281
BssNAI	GTATAC	1 cut(s)	1256
BssSI	CACGAG	1 cut(s)	1620
BssT1I	CCWWGG	1 cut(s)	1244
Bst1107I	GTATAC	1 cut(s)	1256
Bst2BI	CACGAG	1 cut(s)	1620
Bst2UI	CCWGG	4 cut(s)	179, 1071, 1332, 1875
Bst4CI	ACNGT	8 cut(s)	862, 1253, 1367, 1426, 1475, 1485, 1814, 1956
Bst6I	CTCTTC	2 cut(s)	648, 2043
BstAPI	GCANNNNNTGC	1 cut(s)	797
BstAUI	TGTACA	1 cut(s)	1978
BstBAI	YACGTR	1 cut(s)	731
BstC8I	GCNNGC	5 cut(s)	79, 83, 747, 1417, 1765
BstDEI	CTNAG	8 cut(s)	365, 462, 467, 1040, 1106, 1215, 1689, 1949
BstDSI	CCRYGG	1 cut(s)	1244
BstF5I	GGATG	7 cut(s)	415, 565, 673, 1051, 1321, 1414, 1455
BstFNI	CGCG	1 cut(s)	612
BstKTI	GATC	2 cut(s)	1194, 1284
BstMAI	GTCTC	3 cut(s)	147, 187, 1875
BstMBI	GATC	2 cut(s)	1191, 1281
BstMWI	GCNNNNNNNGC	5 cut(s)	103, 367, 797, 1538, 1780
BstNI	CCWGG	4 cut(s)	179, 1071, 1332, 1875
BstNSI	RCATGY	2 cut(s)	749, 1787
BstSCI	CCNGG	6 cut(s)	177, 310, 913, 1069, 1330, 1873
BstSFI	CTRYAG	1 cut(s)	528
BstSLI	GKGCMC	1 cut(s)	440
BstUI	CGCG	1 cut(s)	612
BstV1I	GCAGC	9 cut(s)	90, 210, 222, 348, 949, 1424, 1590, 1647, 1900
BstX2I	RGATCY	1 cut(s)	1191
BstXI	CCANNNNNNTGG	2 cut(s)	1331, 1842
BstYI	RGATCY	1 cut(s)	1191
BstZ17I	GTATAC	1 cut(s)	1256
Bsu36I	CCTNAGG	1 cut(s)	1689
BsuRI	GGCC	2 cut(s)	577, 2010
BtgI	CCRYGG	1 cut(s)	1244
BtsCI	GGATG	7 cut(s)	415, 565, 673, 1051, 1321, 1414, 1455
BtsI	GCAGTG	4 cut(s)	784, 1324, 1647, 1709
BtsIMutI	CAGTG	6 cut(s)	440, 784, 1324, 1647, 1709, 1757
BveI	ACCTGC	2 cut(s)	1283, 1316
Cac8I	GCNNGC	5 cut(s)	79, 83, 747, 1417, 1765
CaiI	CAGNNNCTG	1 cut(s)	992
Cfr13I	GGNCC	4 cut(s)	575, 725, 1150, 2009
CseI	GACGC	1 cut(s)	968
Csp6I	GTAC	4 cut(s)	1067, 1265, 1896, 1979
CviQI	GTAC	4 cut(s)	1067, 1265, 1896, 1979
DdeI	CTNAG	8 cut(s)	365, 462, 467, 1040, 1106, 1215, 1689, 1949
DpnI	GATC	2 cut(s)	1193, 1283
DpnII	GATC	2 cut(s)	1191, 1281
DraI	TTTAAA	2 cut(s)	1099, 1671
Eam1104I	CTCTTC	2 cut(s)	648, 2043
EarI	CTCTTC	2 cut(s)	648, 2043
Eco130I	CCWWGG	1 cut(s)	1244
Eco31I	GGTCTC	1 cut(s)	187
Eco47I	GGWCC	2 cut(s)	725, 1150
Eco57I	CTGAAG	1 cut(s)	1799
Eco81I	CCTNAGG	1 cut(s)	1689
Eco88I	CYCGRG	1 cut(s)	579
EcoO109I	RGGNCCY	1 cut(s)	575
EcoRI	GAATTC	2 cut(s)	283, 2023
EcoRII	CCWGG	4 cut(s)	177, 1069, 1330, 1873
EcoT14I	CCWWGG	1 cut(s)	1244
EcoT22I	ATGCAT	1 cut(s)	850
ErhI	CCWWGG	1 cut(s)	1244
FaqI	GGGAC	4 cut(s)	784, 1262, 1403, 1957
FauNDI	CATATG	1 cut(s)	1146
FblI	GTMKAC	2 cut(s)	531, 1255
Fnu4HI	GCNGC	9 cut(s)	104, 211, 224, 362, 938, 1413, 1579, 1661, 1889
FokI	GGATG	7 cut(s)	422, 552, 680, 1058, 1328, 1421, 1442
Fsp4HI	GCNGC	9 cut(s)	104, 211, 224, 362, 938, 1413, 1579, 1661, 1889
FspBI	CTAG	3 cut(s)	297, 774, 930
GluI	GCNGC	9 cut(s)	104, 211, 224, 362, 938, 1413, 1579, 1661, 1889
GsuI	CTGGAG	1 cut(s)	937
HaeIII	GGCC	2 cut(s)	577, 2010
HapII	CCGG	4 cut(s)	111, 312, 914, 1630
HgaI	GACGC	1 cut(s)	968
HindIII	AAGCTT	3 cut(s)	1217, 1232, 1765
HinfI	GANTC	5 cut(s)	18, 218, 293, 1804, 2015
HpaII	CCGG	4 cut(s)	111, 312, 914, 1630
HphI	GGTGA	5 cut(s)	136, 257, 878, 1024, 1297
Hpy166II	GTNNAC	9 cut(s)	532, 728, 1001, 1067, 1225, 1256, 1710, 1755, 1999
Hpy188I	TCNGA	5 cut(s)	60, 463, 570, 1572, 1952
Hpy188III	TCNNGA	6 cut(s)	15, 506, 552, 954, 1630, 1688
Hpy8I	GTNNAC	9 cut(s)	532, 728, 1001, 1067, 1225, 1256, 1710, 1755, 1999
Hpy99I	CGWCG	3 cut(s)	38, 41, 44
HpyAV	CCTTC	5 cut(s)	97, 383, 389, 848, 1875
HpyCH4III	ACNGT	8 cut(s)	862, 1253, 1367, 1426, 1475, 1485, 1814, 1956
HpyCH4IV	ACGT	3 cut(s)	123, 730, 1003
HpyF10VI	GCNNNNNNNGC	5 cut(s)	103, 367, 797, 1538, 1780
HpyF3I	CTNAG	8 cut(s)	365, 462, 467, 1040, 1106, 1215, 1689, 1949
HpySE526I	ACGT	3 cut(s)	123, 730, 1003
Kpn2I	TCCGGA	1 cut(s)	1629
KpnI	GGTACC	1 cut(s)	1899
Kzo9I	GATC	2 cut(s)	1191, 1281
LmnI	GCTCC	4 cut(s)	314, 492, 1205, 1632
Lsp1109I	GCAGC	9 cut(s)	90, 210, 222, 348, 949, 1424, 1590, 1647, 1900
LweI	GCATC	6 cut(s)	658, 835, 1081, 1306, 1399, 1519
MaeI	CTAG	3 cut(s)	297, 774, 930
MaeII	ACGT	3 cut(s)	123, 730, 1003
MaeIII	GTNAC	3 cut(s)	1303, 1475, 1645
MalI	GATC	2 cut(s)	1193, 1283
MboI	GATC	2 cut(s)	1191, 1281
MfeI	CAATTG	1 cut(s)	1587
MflI	RGATCY	1 cut(s)	1191
MhlI	GDGCHC	3 cut(s)	440, 840, 1629
MlyI	GAGTC	2 cut(s)	302, 1813
MmeI	TCCRAC	2 cut(s)	1823, 1859
Mph1103I	ATGCAT	1 cut(s)	850
MroI	TCCGGA	1 cut(s)	1629
MroXI	GAANNNNTTC	2 cut(s)	123, 1438
MseI	TTAA	7 cut(s)	306, 702, 1098, 1166, 1670, 1715, 2050
MslI	CAYNNNNRTG	1 cut(s)	495
MspI	CCGG	4 cut(s)	111, 312, 914, 1630
MspR9I	CCNGG	6 cut(s)	179, 312, 915, 1071, 1332, 1875
MunI	CAATTG	1 cut(s)	1587
Mva1269I	GAATGC	2 cut(s)	1239, 1930
MvaI	CCWGG	4 cut(s)	179, 1071, 1332, 1875
MvnI	CGCG	1 cut(s)	612
MwoI	GCNNNNNNNGC	5 cut(s)	103, 367, 797, 1538, 1780
NciI	CCSGG	2 cut(s)	312, 915
NcoI	CCATGG	1 cut(s)	1244
NdeI	CATATG	1 cut(s)	1146
NdeII	GATC	2 cut(s)	1191, 1281
NlaIV	GGNNCC	6 cut(s)	316, 576, 1336, 1746, 1897, 1917
NmuCI	GTSAC	2 cut(s)	1303, 1645
NsiI	ATGCAT	1 cut(s)	850
NspI	RCATGY	2 cut(s)	749, 1787
PaeI	GCATGC	1 cut(s)	749
PaeR7I	CTCGAG	1 cut(s)	579
PaqCI	CACCTGC	1 cut(s)	1316
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 837
PctI	GAATGC	2 cut(s)	1239, 1930
PdmI	GAANNNNTTC	2 cut(s)	123, 1438
PfeI	GAWTC	3 cut(s)	18, 218, 2015
PfoI	TCCNGGA	2 cut(s)	913, 1873
PkrI	GCNGC	9 cut(s)	105, 212, 225, 363, 939, 1414, 1580, 1662, 1890
PleI	GAGTC	2 cut(s)	301, 1812
PpsI	GAGTC	2 cut(s)	301, 1812
Ppu21I	YACGTR	1 cut(s)	731
PsiI	TTATAA	2 cut(s)	647, 1904
Psp1406I	AACGTT	1 cut(s)	123
Psp6I	CCWGG	4 cut(s)	177, 1069, 1330, 1873
PspGI	CCWGG	4 cut(s)	177, 1069, 1330, 1873
PspN4I	GGNNCC	6 cut(s)	316, 576, 1336, 1746, 1897, 1917
PspPI	GGNCC	4 cut(s)	575, 725, 1150, 2009
PspXI	VCTCGAGB	1 cut(s)	579
PstNI	CAGNNNCTG	1 cut(s)	992
PsuI	RGATCY	1 cut(s)	1191
RsaI	GTAC	4 cut(s)	1068, 1266, 1897, 1980
RsaNI	GTAC	4 cut(s)	1067, 1265, 1896, 1979
RseI	CAYNNNNRTG	1 cut(s)	495
SaqAI	TTAA	7 cut(s)	306, 702, 1098, 1166, 1670, 1715, 2050
SatI	GCNGC	9 cut(s)	104, 211, 224, 362, 938, 1413, 1579, 1661, 1889
Sau3AI	GATC	2 cut(s)	1191, 1281
Sau96I	GGNCC	4 cut(s)	575, 725, 1150, 2009
SchI	GAGTC	2 cut(s)	302, 1813
ScrFI	CCNGG	6 cut(s)	179, 312, 915, 1071, 1332, 1875
SduI	GDGCHC	3 cut(s)	440, 840, 1629
SfaNI	GCATC	6 cut(s)	658, 835, 1081, 1306, 1399, 1519
SfcI	CTRYAG	1 cut(s)	528
Sfr274I	CTCGAG	1 cut(s)	579
SinI	GGWCC	2 cut(s)	725, 1150
SlaI	CTCGAG	1 cut(s)	579
SmiMI	CAYNNNNRTG	1 cut(s)	495
SmlI	CTYRAG	1 cut(s)	579
SmoI	CTYRAG	1 cut(s)	579
SphI	GCATGC	1 cut(s)	749
SsiI	CCGC	5 cut(s)	69, 134, 280, 612, 1358
SspI	AATATT	1 cut(s)	1288
SspMI	CTAG	3 cut(s)	297, 774, 930
StyD4I	CCNGG	6 cut(s)	177, 310, 913, 1069, 1330, 1873
StyI	CCWWGG	1 cut(s)	1244
TaaI	ACNGT	8 cut(s)	862, 1253, 1367, 1426, 1475, 1485, 1814, 1956
TaiI	ACGT	3 cut(s)	126, 733, 1006
TatI	WGTACW	1 cut(s)	1978
TfiI	GAWTC	3 cut(s)	18, 218, 2015
Tru1I	TTAA	7 cut(s)	306, 702, 1098, 1166, 1670, 1715, 2050
Tru9I	TTAA	7 cut(s)	306, 702, 1098, 1166, 1670, 1715, 2050
TscAI	CASTG	6 cut(s)	440, 784, 1331, 1654, 1709, 1764
TseFI	GTSAC	2 cut(s)	1303, 1645
TseI	GCWGC	9 cut(s)	103, 210, 223, 361, 937, 1412, 1578, 1660, 1888
Tsp45I	GTSAC	2 cut(s)	1303, 1645
TspDTI	ATGAA	7 cut(s)	426, 489, 1133, 1244, 1436, 1727, 1740
TspGWI	ACGGA	1 cut(s)	917
TspRI	CASTG	6 cut(s)	440, 784, 1331, 1654, 1709, 1764
VpaK11BI	GGWCC	2 cut(s)	725, 1150
XapI	RAATTY	3 cut(s)	283, 1734, 2023
XceI	RCATGY	2 cut(s)	749, 1787
XhoI	CTCGAG	1 cut(s)	579
XmiI	GTMKAC	2 cut(s)	531, 1255
XmnI	GAANNNNTTC	2 cut(s)	123, 1438
XspI	CTAG	3 cut(s)	297, 774, 930
Zsp2I	ATGCAT	1 cut(s)	850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.