Prupe.5G197900_v2.0.a1

Two-component response regulator-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
15974165 .. 15978247
4083 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G197900.1

Sequence Viewer

Length: 1425 bp
ATGGAGTCTAAGGAGCTCAATTTGAAGAAGCACTCTGAAAATGGTGGTAGTGGTGGTGATGGGTTCATTGACAGAAGCAAAGTGAGGATCTTGTTGTGTGATAACGACGAGCACAGTTCGGAAGAGGTTTTTGCCCTTCTGATGAAATGCTCTTACCAGGTCATTTCAGTGAGGTCTCCAAGACAGGTGATTGATGCATTGAATGCTGAAGCACCTGATATAGATATCATACTAGCCGAAGTTGACCTTCCCATGAGAAAGGGCTTGAAAATGTTGAAGTATATCACATGGGATAGAGAGTTAAGGCGCATTCCTGTAATCATGATGTCAGCACAAGATGAGGTCTCTACTGTTGTTAAGTGCTTGAAGCTCGGAGCAGCAGACTATCTCGTAAAGCCTTTACGAACTAATGAGCTTCTAAACTTGTGGACACACGTGTGGAGAAGAAGGCGCATGTTTTCTAGTGCTGCTGCTATGGAGTTTCCAGTCAATAATGTATCAGAATTTCGGCCTGACGTCCCAGGAACACATGACCACCAAACTGGAAAATCTTCATCTGGCCCAAAAAAGAGTAACCTAAAGATGGGAGAGTCATCATCATTCTTTACGTATGTTAAATCAAGCACACTTACCTGCGCTGAAGACAATGTTGTTGAAGAAGTGAGGATAAAAGAGAAACATCAAGCATTTGGTTGCCAAGTTGTGGATGATCCCCAAGTACACGTAAGTCGAGAGGCACAGGAAAGCTATTCAGAAGGAGATGACTTGCAGGGCAGTAATAGTAGTGTCCCAGATTCCCTTTCATTGGAGGGGTCTTGTACCCCACTTGGATCAATGTTGCTTCAACATGAAAAGAATTTTGAGAAAGACCAATCCTCACAGGTGCTTGTGCATCCAAGAAATGAACTTCAACAAGATTTTTCTGGCTTACCTGCCCAAGCTGCCTATCCGTATTATATTCCAGGGGTTGTGAATCAAGTTATGATGTCATCATCAACACAAGTGCATCAAAAGAATCCACATGACATGCAAAATCATTCTACAACCGCTATTATGCCACAATACAGTCATCTTCCGCACTGCCCTCCAGATGTAACTGGGATGACTCCATTCCCCTGCTACCAGCTTAGTGTATGCTTACAACCTGGTCAAATTCCTAATACTCATCCATGGCCATCACTTGGAATTTCATCTTCCACTGAAGTGAAATTAAATAAGGTTGACAGAAGAGAGGCAGCGTTGATTAAATTTACGAAAAAAAGAATGGAGCTTTGTTTTGATAAAAAGATCAGGTATGTTAACCGAAAGCGACTTGCTGAAAGGAGACCTCGTGTGCGGGGACAATTTGTGAGGAAGGCAAGTGGTGTAAATCTGGAGCTTCAGTCAAGGGAGTACTCTCCGGAAGATGGTGCTTCTGGATGTTAA

Protein Analysis

475

Amino Acids

53.32

Weight (kDa)

7.6

Isoelectric Point (pI)

48.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 519
Acc36I ACCTGC 2 cut(s) 641, 940
AccB7I CCANNNNNTGG 2 cut(s) 703, 1181
AccIII TCCGGA 1 cut(s) 1399
AciI CCGC 3 cut(s) 1047, 1076, 1336
AclWI GGATC 3 cut(s) 95, 704, 838
AcoI YGGCCR 1 cut(s) 1172
AcsI RAATTY 5 cut(s) 503, 856, 1152, 1185, 1247
AcuI CTGAAG 4 cut(s) 228, 660, 1221, 1364
AcvI CACGTG 1 cut(s) 436
AcyI GRCGYC 1 cut(s) 516
AfaI GTAC 3 cut(s) 720, 820, 1394
AfiI CCNNNNNNNGG 5 cut(s) 583, 703, 805, 1181, 1406
AflIII ACRYGT 3 cut(s) 433, 435, 721
AgsI TTSAA 8 cut(s) 25, 202, 268, 277, 367, 656, 845, 911
AjnI CCWGG 4 cut(s) 156, 520, 961, 1144
AleI CACNNNNGTG 2 cut(s) 436, 1202
AluBI AGCT 8 cut(s) 16, 370, 415, 747, 941, 1126, 1270, 1378
AluI AGCT 8 cut(s) 16, 370, 415, 747, 941, 1126, 1270, 1378
Alw21I GWGCWC 2 cut(s) 18, 114
Alw26I GTCTC 3 cut(s) 180, 349, 1318
AlwI GGATC 3 cut(s) 95, 704, 838
Aor13HI TCCGGA 1 cut(s) 1399
AoxI GGCC 3 cut(s) 509, 559, 1172
ApeKI GCWGC 5 cut(s) 377, 467, 470, 941, 1235
ApoI RAATTY 5 cut(s) 503, 856, 1152, 1185, 1247
Asp700I GAANNNNTTC 1 cut(s) 550
AspLEI GCGC 3 cut(s) 309, 453, 638
AspS9I GGNCC 1 cut(s) 560
AsuHPI GGTGA 2 cut(s) 68, 199
BalI TGGCCA 1 cut(s) 1174
BanII GRGCYC 1 cut(s) 18
BauI CACGAG 1 cut(s) 1329
BbrPI CACGTG 1 cut(s) 436
BbsI GAAGAC 1 cut(s) 648
Bbv12I GWGCWC 2 cut(s) 18, 114
BbvI GCAGC 5 cut(s) 389, 454, 457, 928, 1247
BccI CCATC 4 cut(s) 53, 577, 1183, 1400
BciT130I CCWGG 4 cut(s) 158, 522, 963, 1146
BcoDI GTCTC 3 cut(s) 180, 349, 1318
BfaI CTAG 2 cut(s) 233, 462
BfuAI ACCTGC 2 cut(s) 641, 940
BisI GCNGC 5 cut(s) 378, 468, 471, 942, 1236
BlsI GCNGC 5 cut(s) 379, 469, 472, 943, 1237
BmcAI AGTACT 1 cut(s) 1394
Bme1390I CCNGG 4 cut(s) 158, 522, 963, 1146
BmgT120I GGNCC 1 cut(s) 560
BmrFI CCNGG 4 cut(s) 158, 522, 963, 1146
BmrI ACTGGG 1 cut(s) 1107
BmsI GCATC 3 cut(s) 184, 901, 1015
BmuI ACTGGG 1 cut(s) 1107
BpiI GAAGAC 1 cut(s) 648
BpmI CTGGAG 2 cut(s) 1071, 1394
BsaAI YACGTR 3 cut(s) 436, 609, 724
BsaHI GRCGYC 1 cut(s) 516
BsaI GGTCTC 3 cut(s) 180, 349, 1318
BsaJI CCNNGG 3 cut(s) 520, 962, 1169
BsaWI WCCGGW 1 cut(s) 1399
BsaXI ACNNNNNCTCC 4 cut(s) 1315, 1345, 1367, 1397
Bsc4I CCNNNNNNNGG 5 cut(s) 583, 703, 805, 1181, 1406
Bse1I ACTGG 3 cut(s) 485, 547, 1102
BseAI TCCGGA 1 cut(s) 1399
BseBI CCWGG 4 cut(s) 158, 522, 963, 1146
BseDI CCNNGG 3 cut(s) 520, 962, 1169
BseGI GGATG 5 cut(s) 712, 892, 1107, 1165, 1424
BseLI CCNNNNNNNGG 5 cut(s) 583, 703, 805, 1181, 1406
BseNI ACTGG 3 cut(s) 485, 547, 1102
BseXI GCAGC 5 cut(s) 389, 454, 457, 928, 1247
BshFI GGCC 3 cut(s) 511, 561, 1174
BsiHKAI GWGCWC 2 cut(s) 18, 114
BsiSI CCGG 1 cut(s) 1400
BslFI GGGAC 3 cut(s) 503, 773, 1353
BslI CCNNNNNNNGG 5 cut(s) 583, 703, 805, 1181, 1406
BsmAI GTCTC 3 cut(s) 180, 349, 1318
BsmFI GGGAC 3 cut(s) 503, 773, 1353
BsmI GAATGC 2 cut(s) 208, 309
BsnI GGCC 3 cut(s) 511, 561, 1174
Bso31I GGTCTC 3 cut(s) 180, 349, 1318
Bsp1286I GDGCHC 2 cut(s) 18, 114
Bsp13I TCCGGA 1 cut(s) 1399
Bsp143I GATC 4 cut(s) 87, 709, 830, 1287
Bsp19I CCATGG 1 cut(s) 1169
BspACI CCGC 3 cut(s) 1047, 1076, 1336
BspANI GGCC 3 cut(s) 511, 561, 1174
BspEI TCCGGA 1 cut(s) 1399
BspHI TCATGA 1 cut(s) 321
BspMI ACCTGC 2 cut(s) 641, 940
BspPI GGATC 3 cut(s) 95, 704, 838
BspTNI GGTCTC 3 cut(s) 180, 349, 1318
BsrI ACTGG 3 cut(s) 485, 547, 1102
BssECI CCNNGG 3 cut(s) 520, 962, 1169
BssMI GATC 4 cut(s) 87, 709, 830, 1287
BssNI GRCGYC 1 cut(s) 516
BssSI CACGAG 1 cut(s) 1329
BssT1I CCWWGG 1 cut(s) 1169
Bst2BI CACGAG 1 cut(s) 1329
Bst2UI CCWGG 4 cut(s) 158, 522, 963, 1146
Bst4CI ACNGT 3 cut(s) 116, 352, 1067
Bst6I CTCTTC 2 cut(s) 117, 1222
BstACI GRCGYC 1 cut(s) 516
BstAPI GCANNNNNTGC 1 cut(s) 203
BstBAI YACGTR 3 cut(s) 436, 609, 724
BstDEI CTNAG 2 cut(s) 9, 1127
BstDSI CCRYGG 1 cut(s) 1169
BstF5I GGATG 5 cut(s) 712, 892, 1107, 1165, 1424
BstHHI GCGC 3 cut(s) 309, 453, 638
BstKTI GATC 4 cut(s) 90, 712, 833, 1290
BstMAI GTCTC 3 cut(s) 180, 349, 1318
BstMBI GATC 4 cut(s) 87, 709, 830, 1287
BstMWI GCNNNNNNNGC 2 cut(s) 203, 941
BstNI CCWGG 4 cut(s) 158, 522, 963, 1146
BstNSI RCATGY 2 cut(s) 457, 1030
BstSCI CCNGG 4 cut(s) 156, 520, 961, 1144
BstSNI TACGTA 1 cut(s) 609
BstV1I GCAGC 5 cut(s) 389, 454, 457, 928, 1247
BstV2I GAAGAC 1 cut(s) 648
BstX2I RGATCY 1 cut(s) 87
BstXI CCANNNNNNTGG 1 cut(s) 542
BstYI RGATCY 1 cut(s) 87
BsuRI GGCC 3 cut(s) 511, 561, 1174
BtgI CCRYGG 1 cut(s) 1169
BtsCI GGATG 5 cut(s) 712, 892, 1107, 1165, 1424
BtsI GCAGTG 1 cut(s) 1078
BtsIMutI CAGTG 3 cut(s) 174, 1078, 1197
BveI ACCTGC 2 cut(s) 641, 940
CciI TCATGA 1 cut(s) 321
CfoI GCGC 3 cut(s) 309, 453, 638
Cfr13I GGNCC 1 cut(s) 560
CsiI ACCWGGT 2 cut(s) 156, 1144
Csp6I GTAC 3 cut(s) 719, 819, 1393
CviAII CATG 9 cut(s) 253, 288, 322, 454, 530, 848, 1022, 1027, 1170
CviQI GTAC 3 cut(s) 719, 819, 1393
DdeI CTNAG 2 cut(s) 9, 1127
DpnI GATC 4 cut(s) 89, 711, 832, 1289
DpnII GATC 4 cut(s) 87, 709, 830, 1287
EaeI YGGCCR 1 cut(s) 1172
Eam1104I CTCTTC 2 cut(s) 117, 1222
EarI CTCTTC 2 cut(s) 117, 1222
Ecl136II GAGCTC 1 cut(s) 16
Eco105I TACGTA 1 cut(s) 609
Eco130I CCWWGG 1 cut(s) 1169
Eco24I GRGCYC 1 cut(s) 18
Eco31I GGTCTC 3 cut(s) 180, 349, 1318
Eco32I GATATC 1 cut(s) 226
Eco53kI GAGCTC 1 cut(s) 16
Eco57I CTGAAG 4 cut(s) 228, 660, 1221, 1364
Eco72I CACGTG 1 cut(s) 436
EcoICRI GAGCTC 1 cut(s) 16
EcoRII CCWGG 4 cut(s) 156, 520, 961, 1144
EcoRV GATATC 1 cut(s) 226
EcoT14I CCWWGG 1 cut(s) 1169
EcoT22I ATGCAT 1 cut(s) 199
EcoT38I GRGCYC 1 cut(s) 18
ErhI CCWWGG 1 cut(s) 1169
FaeI CATG 9 cut(s) 256, 291, 325, 457, 533, 851, 1025, 1030, 1173
FalI AAGNNNNNCTT 2 cut(s) 231, 263
FaqI GGGAC 3 cut(s) 503, 773, 1353
FatI CATG 9 cut(s) 252, 287, 321, 453, 529, 847, 1021, 1026, 1169
FauI CCCGC 1 cut(s) 1329
Fnu4HI GCNGC 5 cut(s) 378, 468, 471, 942, 1236
FokI GGATG 4 cut(s) 719, 879, 1114, 1152
FriOI GRGCYC 1 cut(s) 18
Fsp4HI GCNGC 5 cut(s) 378, 468, 471, 942, 1236
FspBI CTAG 2 cut(s) 233, 462
GlaI GCGC 3 cut(s) 308, 452, 637
GluI GCNGC 5 cut(s) 378, 468, 471, 942, 1236
GsuI CTGGAG 2 cut(s) 1071, 1394
HaeIII GGCC 3 cut(s) 511, 561, 1174
HapII CCGG 1 cut(s) 1400
HhaI GCGC 3 cut(s) 309, 453, 638
Hin1I GRCGYC 1 cut(s) 516
Hin1II CATG 9 cut(s) 256, 291, 325, 457, 533, 851, 1025, 1030, 1173
Hin6I GCGC 3 cut(s) 307, 451, 636
HinP1I GCGC 3 cut(s) 307, 451, 636
HincII GTYRAC 3 cut(s) 244, 1222, 1300
HindII GTYRAC 3 cut(s) 244, 1222, 1300
HinfI GANTC 6 cut(s) 5, 590, 794, 973, 1015, 1105
HpaI GTTAAC 1 cut(s) 1300
HpaII CCGG 1 cut(s) 1400
HphI GGTGA 2 cut(s) 68, 199
Hpy166II GTNNAC 5 cut(s) 244, 429, 721, 1222, 1300
Hpy188I TCNGA 6 cut(s) 37, 121, 141, 374, 502, 754
Hpy188III TCNNGA 6 cut(s) 322, 731, 1088, 1373, 1400, 1416
Hpy8I GTNNAC 5 cut(s) 244, 429, 721, 1222, 1300
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 5 cut(s) 146, 257, 441, 749, 1348
HpyCH4III ACNGT 3 cut(s) 116, 352, 1067
HpyCH4IV ACGT 4 cut(s) 435, 516, 608, 723
HpyCH4V TGCA 5 cut(s) 197, 769, 892, 1006, 1030
HpyF10VI GCNNNNNNNGC 2 cut(s) 203, 941
HpyF3I CTNAG 2 cut(s) 9, 1127
HpySE526I ACGT 4 cut(s) 435, 516, 608, 723
Hsp92I GRCGYC 1 cut(s) 516
Hsp92II CATG 9 cut(s) 256, 291, 325, 457, 533, 851, 1025, 1030, 1173
HspAI GCGC 3 cut(s) 307, 451, 636
Kpn2I TCCGGA 1 cut(s) 1399
KspAI GTTAAC 1 cut(s) 1300
Kzo9I GATC 4 cut(s) 87, 709, 830, 1287
LmnI GCTCC 4 cut(s) 13, 374, 1267, 1375
Lsp1109I GCAGC 5 cut(s) 389, 454, 457, 928, 1247
LweI GCATC 3 cut(s) 184, 901, 1015
MabI ACCWGGT 2 cut(s) 156, 1144
MaeI CTAG 2 cut(s) 233, 462
MaeII ACGT 4 cut(s) 435, 516, 608, 723
MaeIII GTNAC 2 cut(s) 572, 1093
MalI GATC 4 cut(s) 89, 711, 832, 1289
MboI GATC 4 cut(s) 87, 709, 830, 1287
MflI RGATCY 1 cut(s) 87
MhlI GDGCHC 2 cut(s) 18, 114
MlsI TGGCCA 1 cut(s) 1174
MluCI AATT 8 cut(s) 19, 503, 856, 1152, 1185, 1208, 1247, 1343
MluNI TGGCCA 1 cut(s) 1174
MlyI GAGTC 3 cut(s) 14, 599, 1099
Mox20I TGGCCA 1 cut(s) 1174
Mph1103I ATGCAT 1 cut(s) 199
MroI TCCGGA 1 cut(s) 1399
MroXI GAANNNNTTC 1 cut(s) 550
MscI TGGCCA 1 cut(s) 1174
MseI TTAA 7 cut(s) 302, 357, 615, 1211, 1245, 1299, 1423
MslI CAYNNNNRTG 3 cut(s) 167, 436, 1202
Msp20I TGGCCA 1 cut(s) 1174
MspI CCGG 1 cut(s) 1400
MspR9I CCNGG 4 cut(s) 158, 522, 963, 1146
Mva1269I GAATGC 2 cut(s) 208, 309
MvaI CCWGG 4 cut(s) 158, 522, 963, 1146
MwoI GCNNNNNNNGC 2 cut(s) 203, 941
NcoI CCATGG 1 cut(s) 1169
NdeII GATC 4 cut(s) 87, 709, 830, 1287
NlaIII CATG 9 cut(s) 256, 291, 325, 457, 533, 851, 1025, 1030, 1173
NsiI ATGCAT 1 cut(s) 199
NspI RCATGY 2 cut(s) 457, 1030
OliI CACNNNNGTG 2 cut(s) 436, 1202
PagI TCATGA 1 cut(s) 321
PctI GAATGC 2 cut(s) 208, 309
PdmI GAANNNNTTC 1 cut(s) 550
PfeI GAWTC 3 cut(s) 794, 973, 1015
PflMI CCANNNNNTGG 2 cut(s) 703, 1181
PkrI GCNGC 5 cut(s) 379, 469, 472, 943, 1237
PleI GAGTC 3 cut(s) 13, 598, 1099
PmaCI CACGTG 1 cut(s) 436
PmlI CACGTG 1 cut(s) 436
PpsI GAGTC 3 cut(s) 13, 598, 1099
Ppu21I YACGTR 3 cut(s) 436, 609, 724
Psp124BI GAGCTC 1 cut(s) 18
Psp6I CCWGG 4 cut(s) 156, 520, 961, 1144
PspCI CACGTG 1 cut(s) 436
PspGI CCWGG 4 cut(s) 156, 520, 961, 1144
PspPI GGNCC 1 cut(s) 560
PsuI RGATCY 1 cut(s) 87
RsaI GTAC 3 cut(s) 720, 820, 1394
RsaNI GTAC 3 cut(s) 719, 819, 1393
RseI CAYNNNNRTG 3 cut(s) 167, 436, 1202
SacI GAGCTC 1 cut(s) 18
SaqAI TTAA 7 cut(s) 302, 357, 615, 1211, 1245, 1299, 1423
SatI GCNGC 5 cut(s) 378, 468, 471, 942, 1236
Sau3AI GATC 4 cut(s) 87, 709, 830, 1287
Sau96I GGNCC 1 cut(s) 560
ScaI AGTACT 1 cut(s) 1394
SchI GAGTC 3 cut(s) 14, 599, 1099
ScrFI CCNGG 4 cut(s) 158, 522, 963, 1146
SduI GDGCHC 2 cut(s) 18, 114
SexAI ACCWGGT 2 cut(s) 156, 1144
SfaNI GCATC 3 cut(s) 184, 901, 1015
SmiMI CAYNNNNRTG 3 cut(s) 167, 436, 1202
SnaBI TACGTA 1 cut(s) 609
Sse9I AATT 8 cut(s) 19, 503, 856, 1152, 1185, 1208, 1247, 1343
SsiI CCGC 3 cut(s) 1047, 1076, 1336
SspMI CTAG 2 cut(s) 233, 462
SstI GAGCTC 1 cut(s) 18
StyD4I CCNGG 4 cut(s) 156, 520, 961, 1144
StyI CCWWGG 1 cut(s) 1169
TaaI ACNGT 3 cut(s) 116, 352, 1067
TaiI ACGT 4 cut(s) 438, 519, 611, 726
TaqI TCGA 1 cut(s) 730
TasI AATT 8 cut(s) 19, 503, 856, 1152, 1185, 1208, 1247, 1343
TatI WGTACW 2 cut(s) 718, 1392
TfiI GAWTC 3 cut(s) 794, 973, 1015
Tru1I TTAA 7 cut(s) 302, 357, 615, 1211, 1245, 1299, 1423
Tru9I TTAA 7 cut(s) 302, 357, 615, 1211, 1245, 1299, 1423
TscAI CASTG 3 cut(s) 174, 1085, 1204
TseI GCWGC 5 cut(s) 377, 467, 470, 941, 1235
TspDTI ATGAA 7 cut(s) 55, 158, 543, 792, 864, 918, 1179
TspGWI ACGGA 1 cut(s) 939
TspRI CASTG 3 cut(s) 174, 1085, 1204
Van91I CCANNNNNTGG 2 cut(s) 703, 1181
XapI RAATTY 5 cut(s) 503, 856, 1152, 1185, 1247
XceI RCATGY 2 cut(s) 457, 1030
XmnI GAANNNNTTC 1 cut(s) 550
XspI CTAG 2 cut(s) 233, 462
ZraI GACGTC 1 cut(s) 517
ZrmI AGTACT 1 cut(s) 1394
Zsp2I ATGCAT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.