Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005778

Physical Location & Seq

Genomic Coordinates Reverse (-)

63978610 .. 63983966

Gene Structure 5357 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00271630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGATATGGATCCTAAGGAGCTCAATTTGAACAAAGGACCTGAAGGTTGCGGCGGCGGCGGTGGTGGTGAGGGGTTTATAGATAGGAGCAAGGTGAGGATTTTGCTCTGCGATAACGACGAGTCCAGCTCCGAAGAAGTTCTCAGGCTTCTTTTGAAATGCTCTTATCAAGTCACTTCGGTCAAGTCTCCTCGGCAGGTGATTGATGCATTGAATGCAGAGGGACCTGATATTGATATCATACTTGCTGAAGTTGACCTTCCAATGAGAAAAGGAACGAGAATGTTGAAGTACATCACACGGCATAGAGAGTTGAGGCGCATTCCTGTGATCATGATGTCGGCACAAGATGAGGTCTCTACTGTTGTCAAGTGCCTGAGGCTTGGAGCGGCAGACTATCTTGTAAAGCCTTTACGAACTAATGAGCTTTTAAACTTGTGGACACACATGTGGAGAAGAAGACACATGCTTGGACTTGCAGAGAAGAACGTGTTTAGTTATGACTTTGATACAGTTGTATCAGATCCTAGTGATCCTAATACAAACTCATTCTCGGATGATACAGAAGAAAAGTCTCAGAAGAGTGCCAGTCCAGAGATACCTGTTGCTGCAGCCACGGAGCCTCCACTGGATGATCATTTAGAGTTTCAGAGTGATGTTCCAGAAATAAGTGACCGCCAAACTGGAAAGTTTTCATCTGGCCCAAAAAAGAGCGAACTAAAGATTGGGGGGTCATCTGCCTTCTTTACCTATGTCAAATCGAGCACAATTGAAAACAACTCCCAAGTCCATACGAAGGATAATGGTGCTGAACGGTCAAGAGTGAAAGGGAAACATCCATCATGTAGTCAACAAATGGTTGATGAGTCTCTCCAAGTAAATGGAAATGGAGAAGCATGTGAAAGCTATTCACAAGAAGATGACTTTCCAACCAGTAATAGTATCCCAGATTCTCTTTCATTGGAGAGGTCTTGCACCCCACCCGGTTCAATGGAACTTCAGCATCAGAAGAATAATGCGGAAGACAGATCCTCTCAGGTGCCTGCGCATCCTAGAAATGAACCTCAACACGATGTTTCTAGATTGCCTGCCCATGCTTCGTACCCATACTATATGCCGGGGGTTGTCAATCAGGTTATGGGGTCATCATCAACTCAAGTGTGTCAAAAGAATCTGCACGACATGCCAAATCATGCTGCAGCAGCAATTATGCAACATTACAGTCATCTTCCACACTGCCCTCCACATGTTAATGGGATGACTTCTTTCTCCTACTATCCGCTTAGTATATGCTTACAACCTGGTCAGATGCCTAACAATCATTCATGGCCATCCTTTGGAAGCTCATCCGCCAGTGAAGTAAAATTAAATAAGGTTGACAGAAGAGAGGCAGCATTGATCAAATTCAGGCAGAAAAGAAAGGAGCGTTGCTTTGATAAAAAGATTAGGTATGTTAATCGAAAAAGACTTGCTGAAAGGAGGCCTCGTGTACGGGGACAATTTGTGAGGAAGGTAAATGGTGTAGATGTTGATCTCAATGGGCAACCTGCTTCTCTTGATGATGACGAGGATGATGAGGATGAGAAGGATGATGAGGAGCTTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009892 GO:0009987 GO:0010031 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032501 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048511 GO:0048519 GO:0050789 GO:0050794 GO:0050879 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

535

Amino Acids

59.9

Weight (kDa)

5.84

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	34 - 145	2.7e-18	Response regulator receiver domain
CCT	PF06203	462 - 504	3e-15	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61380
fragaria_vesca	FvH4_5g14560
malus_domestica	MD06G1197300.v1.1 MD14G1204700.v1.1
prunus_persica	Prupe.5G197900_v2.0.a1 Prupe.5G198000_v2.0.a1
pyrus_communis	pycom06g17420 pycom06g17430 pycom14g16910
rosa_chinensis	RchiOBHm_Chr7g0182001
rosa_laevigata	RLG00000005156 RLG00000005161
rosa_multiflora	Rmu_co8226389.1_g000001 Rmu_sc0003511.1_g000044 Rmu_sc0017796.1_g000001 Rmu_ssc0000297.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271630
rosa_rugosa	Rorug06G0445000 Rorug06G0445100 Rorug06G0445300
rosa_samantha	Rh7AG047400 Rh7BG047400 Rh7BG047500 Rh7CG047700 Rh7DG046700
rosa_wichuraiana	Rw0G000460 Rw0G019690 Rw7G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	187
Acc16I	TGCGCA	1 cut(s)	1047
Acc36I	ACCTGC	2 cut(s)	187, 1555
AccB1I	GGYRCC	1 cut(s)	1039
AccB7I	CCANNNNNTGG	1 cut(s)	1337
AccBSI	CCGCTC	1 cut(s)	389
AciI	CCGC	9 cut(s)	51, 54, 57, 60, 389, 676, 1019, 1280, 1350
AclWI	GGATC	5 cut(s)	5, 18, 518, 527, 1023
AcoI	YGGCCR	1 cut(s)	1328
AcsI	RAATTY	1 cut(s)	1403
AcuI	CTGAAG	3 cut(s)	63, 270, 983
AfaI	GTAC	3 cut(s)	293, 1103, 1491
AfiI	CCNNNNNNNGG	2 cut(s)	796, 1337
AflIII	ACRYGT	3 cut(s)	447, 489, 1246
AgsI	TTSAA	6 cut(s)	31, 157, 214, 289, 773, 990
AjnI	CCWGG	1 cut(s)	1300
AjuI	GAANNNNNNNTTGG	2 cut(s)	708, 740
AleI	CACNNNNGTG	1 cut(s)	448
AluBI	AGCT	6 cut(s)	22, 129, 427, 906, 1344, 1600
AluI	AGCT	6 cut(s)	22, 129, 427, 906, 1344, 1600
Alw21I	GWGCWC	2 cut(s)	24, 767
Alw26I	GTCTC	4 cut(s)	192, 361, 579, 873
AlwI	GGATC	5 cut(s)	5, 18, 518, 527, 1023
AoxI	GGCC	3 cut(s)	700, 1328, 1481
ApeKI	GCWGC	6 cut(s)	608, 611, 1196, 1199, 1202, 1391
ApoI	RAATTY	1 cut(s)	1403
Asp700I	GAANNNNTTC	2 cut(s)	138, 691
AspLEI	GCGC	2 cut(s)	321, 1048
AspS9I	GGNCC	3 cut(s)	38, 224, 701
AsuC2I	CCSGG	2 cut(s)	984, 1119
AsuHPI	GGTGA	3 cut(s)	80, 106, 211
AvaII	GGWCC	2 cut(s)	38, 224
AxyI	CCTNAGG	2 cut(s)	15, 377
BaeI	ACNNNNGTAYC	4 cut(s)	501, 501, 534, 534
BalI	TGGCCA	1 cut(s)	1330
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	1039
BanII	GRGCYC	1 cut(s)	24
BauI	CACGAG	1 cut(s)	1485
BbsI	GAAGAC	2 cut(s)	466, 1029
Bbv12I	GWGCWC	2 cut(s)	24, 767
BbvI	GCAGC	6 cut(s)	595, 623, 1183, 1211, 1214, 1403
BccI	CCATC	2 cut(s)	847, 1339
BceAI	ACGGC	1 cut(s)	317
BciT130I	CCWGG	1 cut(s)	1302
BciVI	GTATCC	1 cut(s)	953
BclI	TGATCA	3 cut(s)	330, 634, 1398
BcnI	CCSGG	2 cut(s)	984, 1119
BcoDI	GTCTC	4 cut(s)	192, 361, 579, 873
BfaI	CTAG	3 cut(s)	528, 1053, 1080
BfmI	CTRYAG	2 cut(s)	609, 1197
BfuAI	ACCTGC	2 cut(s)	187, 1555
BfuI	GTATCC	1 cut(s)	953
Bme1390I	CCNGG	3 cut(s)	984, 1119, 1302
Bme18I	GGWCC	2 cut(s)	38, 224
BmgT120I	GGNCC	3 cut(s)	38, 224, 701
BmiI	GGNNCC	4 cut(s)	12, 225, 621, 1041
BmrFI	CCNGG	3 cut(s)	984, 1119, 1302
BmsI	GCATC	4 cut(s)	196, 1012, 1057, 1299
BpiI	GAAGAC	2 cut(s)	466, 1029
BplI	GAGNNNNNCTC	2 cut(s)	113, 145
BpuEI	CTTGAG	1 cut(s)	1140
BpuMI	CCSGG	2 cut(s)	984, 1119
BsaBI	GATNNNNATC	2 cut(s)	9, 1530
BsaI	GGTCTC	1 cut(s)	361
BsaJI	CCNNGG	3 cut(s)	191, 615, 1118
BsaXI	ACNNNNNCTCC	5 cut(s)	607, 637, 1471, 1501, 1589
Bsc4I	CCNNNNNNNGG	2 cut(s)	796, 1337
Bse1I	ACTGG	5 cut(s)	588, 633, 688, 933, 1353
Bse21I	CCTNAGG	2 cut(s)	15, 377
Bse8I	GATNNNNATC	2 cut(s)	9, 1530
BseBI	CCWGG	1 cut(s)	1302
BseDI	CCNNGG	3 cut(s)	191, 615, 1118
BseJI	GATNNNNATC	2 cut(s)	9, 1530
BseLI	CCNNNNNNNGG	2 cut(s)	796, 1337
BseMII	CTCAG	4 cut(s)	157, 368, 590, 1049
BseNI	ACTGG	5 cut(s)	588, 633, 688, 933, 1353
BseRI	GAGGAG	1 cut(s)	180
BseXI	GCAGC	6 cut(s)	595, 623, 1183, 1211, 1214, 1403
BsgI	GTGCAG	1 cut(s)	1160
BshFI	GGCC	3 cut(s)	702, 1330, 1483
BshNI	GGYRCC	1 cut(s)	1039
BsiHKAI	GWGCWC	2 cut(s)	24, 767
BsiSI	CCGG	2 cut(s)	984, 1118
BslFI	GGGAC	2 cut(s)	237, 1509
BslI	CCNNNNNNNGG	2 cut(s)	796, 1337
BsmAI	GTCTC	4 cut(s)	192, 361, 579, 873
BsmFI	GGGAC	2 cut(s)	237, 1509
BsmI	GAATGC	2 cut(s)	220, 321
BsnI	GGCC	3 cut(s)	702, 1330, 1483
Bso31I	GGTCTC	1 cut(s)	361
Bsp1286I	GDGCHC	2 cut(s)	24, 767
Bsp143I	GATC	8 cut(s)	10, 330, 523, 532, 634, 1028, 1398, 1531
BspACI	CCGC	9 cut(s)	51, 54, 57, 60, 389, 676, 1019, 1280, 1350
BspANI	GGCC	3 cut(s)	702, 1330, 1483
BspCNI	CTCAG	4 cut(s)	156, 369, 589, 1048
BspHI	TCATGA	1 cut(s)	333
BspLI	GGNNCC	4 cut(s)	12, 225, 621, 1041
BspMAI	CTGCAG	2 cut(s)	613, 1201
BspMI	ACCTGC	2 cut(s)	187, 1555
BspPI	GGATC	5 cut(s)	5, 18, 518, 527, 1023
BspT107I	GGYRCC	1 cut(s)	1039
BspTNI	GGTCTC	1 cut(s)	361
BsrBI	CCGCTC	1 cut(s)	389
BsrI	ACTGG	5 cut(s)	588, 633, 688, 933, 1353
BssECI	CCNNGG	3 cut(s)	191, 615, 1118
BssMI	GATC	8 cut(s)	10, 330, 523, 532, 634, 1028, 1398, 1531
BssSI	CACGAG	1 cut(s)	1485
Bst2BI	CACGAG	1 cut(s)	1485
Bst2UI	CCWGG	1 cut(s)	1302
Bst4CI	ACNGT	4 cut(s)	364, 514, 816, 1223
Bst6I	CTCTTC	2 cut(s)	575, 1378
BstAPI	GCANNNNNTGC	2 cut(s)	215, 1183
BstC8I	GCNNGC	3 cut(s)	1044, 1089, 1602
BstDEI	CTNAG	6 cut(s)	15, 143, 377, 576, 1035, 1283
BstDSI	CCRYGG	1 cut(s)	615
BstHHI	GCGC	2 cut(s)	321, 1048
BstKTI	GATC	8 cut(s)	13, 333, 526, 535, 637, 1031, 1401, 1534
BstMAI	GTCTC	4 cut(s)	192, 361, 579, 873
BstMBI	GATC	8 cut(s)	10, 330, 523, 532, 634, 1028, 1398, 1531
BstMWI	GCNNNNNNNGC	4 cut(s)	57, 215, 1183, 1202
BstNI	CCWGG	1 cut(s)	1302
BstNSI	RCATGY	5 cut(s)	451, 469, 900, 1186, 1250
BstSCI	CCNGG	3 cut(s)	982, 1117, 1300
BstSFI	CTRYAG	2 cut(s)	609, 1197
BstV1I	GCAGC	6 cut(s)	595, 623, 1183, 1211, 1214, 1403
BstV2I	GAAGAC	2 cut(s)	466, 1029
BstX2I	RGATCY	3 cut(s)	10, 523, 1028
BstXI	CCANNNNNNTGG	1 cut(s)	881
BstYI	RGATCY	3 cut(s)	10, 523, 1028
Bsu36I	CCTNAGG	2 cut(s)	15, 377
BsuI	GTATCC	1 cut(s)	953
BsuRI	GGCC	3 cut(s)	702, 1330, 1483
BtgI	CCRYGG	1 cut(s)	615
BtsI	GCAGTG	1 cut(s)	1234
BtsIMutI	CAGTG	3 cut(s)	626, 1234, 1360
BveI	ACCTGC	2 cut(s)	187, 1555
Cac8I	GCNNGC	3 cut(s)	1044, 1089, 1602
CciI	TCATGA	1 cut(s)	333
CfoI	GCGC	2 cut(s)	321, 1048
Cfr13I	GGNCC	3 cut(s)	38, 224, 701
CsiI	ACCWGGT	1 cut(s)	1300
Csp6I	GTAC	3 cut(s)	292, 1102, 1490
CviQI	GTAC	3 cut(s)	292, 1102, 1490
DdeI	CTNAG	6 cut(s)	15, 143, 377, 576, 1035, 1283
DpnI	GATC	8 cut(s)	12, 332, 525, 534, 636, 1030, 1400, 1533
DpnII	GATC	8 cut(s)	10, 330, 523, 532, 634, 1028, 1398, 1531
DraI	TTTAAA	1 cut(s)	432
EaeI	YGGCCR	1 cut(s)	1328
Eam1104I	CTCTTC	2 cut(s)	575, 1378
EarI	CTCTTC	2 cut(s)	575, 1378
EciI	GGCGGA	1 cut(s)	1339
Ecl136II	GAGCTC	1 cut(s)	22
Eco147I	AGGCCT	1 cut(s)	1483
Eco24I	GRGCYC	1 cut(s)	24
Eco31I	GGTCTC	1 cut(s)	361
Eco32I	GATATC	1 cut(s)	238
Eco47I	GGWCC	2 cut(s)	38, 224
Eco53kI	GAGCTC	1 cut(s)	22
Eco57I	CTGAAG	3 cut(s)	63, 270, 983
Eco81I	CCTNAGG	2 cut(s)	15, 377
EcoICRI	GAGCTC	1 cut(s)	22
EcoO109I	RGGNCCY	2 cut(s)	38, 224
EcoRII	CCWGG	1 cut(s)	1300
EcoRV	GATATC	1 cut(s)	238
EcoT22I	ATGCAT	1 cut(s)	211
EcoT38I	GRGCYC	1 cut(s)	24
FalI	AAGNNNNNCTT	2 cut(s)	243, 275
FaqI	GGGAC	2 cut(s)	237, 1509
FbaI	TGATCA	3 cut(s)	330, 634, 1398
FriOI	GRGCYC	1 cut(s)	24
FspBI	CTAG	3 cut(s)	528, 1053, 1080
FspI	TGCGCA	1 cut(s)	1047
GlaI	GCGC	2 cut(s)	320, 1047
HaeIII	GGCC	3 cut(s)	702, 1330, 1483
HapII	CCGG	2 cut(s)	984, 1118
HhaI	GCGC	2 cut(s)	321, 1048
Hin6I	GCGC	2 cut(s)	319, 1046
HinP1I	GCGC	2 cut(s)	319, 1046
HincII	GTYRAC	3 cut(s)	256, 851, 1378
HindII	GTYRAC	3 cut(s)	256, 851, 1378
HinfI	GANTC	4 cut(s)	122, 866, 950, 1171
HpaII	CCGG	2 cut(s)	984, 1118
HphI	GGTGA	3 cut(s)	80, 106, 211
Hpy166II	GTNNAC	5 cut(s)	256, 441, 851, 1378, 1490
Hpy188I	TCNGA	7 cut(s)	133, 523, 556, 579, 651, 1008, 1308
Hpy188III	TCNNGA	6 cut(s)	334, 593, 662, 819, 1080, 1556
Hpy8I	GTNNAC	5 cut(s)	256, 441, 851, 1378, 1490
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	6 cut(s)	38, 269, 751, 790, 1504, 1579
HpyCH4III	ACNGT	4 cut(s)	364, 514, 816, 1223
HpyCH4IV	ACGT	1 cut(s)	489
HpyCH4V	TGCA	8 cut(s)	209, 218, 479, 611, 975, 1177, 1199, 1213
HpyF10VI	GCNNNNNNNGC	4 cut(s)	57, 215, 1183, 1202
HpyF3I	CTNAG	6 cut(s)	15, 143, 377, 576, 1035, 1283
HpySE526I	ACGT	1 cut(s)	489
HspAI	GCGC	2 cut(s)	319, 1046
Ksp22I	TGATCA	3 cut(s)	330, 634, 1398
Kzo9I	GATC	8 cut(s)	10, 330, 523, 532, 634, 1028, 1398, 1531
LmnI	GCTCC	7 cut(s)	19, 87, 134, 386, 619, 1423, 1597
Lsp1109I	GCAGC	6 cut(s)	595, 623, 1183, 1211, 1214, 1403
LweI	GCATC	4 cut(s)	196, 1012, 1057, 1299
MabI	ACCWGGT	1 cut(s)	1300
MaeI	CTAG	3 cut(s)	528, 1053, 1080
MaeII	ACGT	1 cut(s)	489
MaeIII	GTNAC	2 cut(s)	172, 671
MalI	GATC	8 cut(s)	12, 332, 525, 534, 636, 1030, 1400, 1533
MbiI	CCGCTC	1 cut(s)	389
MboI	GATC	8 cut(s)	10, 330, 523, 532, 634, 1028, 1398, 1531
MfeI	CAATTG	1 cut(s)	768
MflI	RGATCY	3 cut(s)	10, 523, 1028
MhlI	GDGCHC	2 cut(s)	24, 767
MlsI	TGGCCA	1 cut(s)	1330
MluCI	AATT	6 cut(s)	25, 768, 1206, 1364, 1403, 1499
MluNI	TGGCCA	1 cut(s)	1330
MlyI	GAGTC	2 cut(s)	131, 875
MmeI	TCCRAC	1 cut(s)	953
Mox20I	TGGCCA	1 cut(s)	1330
Mph1103I	ATGCAT	1 cut(s)	211
MroXI	GAANNNNTTC	2 cut(s)	138, 691
MscI	TGGCCA	1 cut(s)	1330
MseI	TTAA	4 cut(s)	431, 1251, 1367, 1455
MslI	CAYNNNNRTG	3 cut(s)	326, 448, 1251
Msp20I	TGGCCA	1 cut(s)	1330
MspI	CCGG	2 cut(s)	984, 1118
MspR9I	CCNGG	3 cut(s)	984, 1119, 1302
MunI	CAATTG	1 cut(s)	768
Mva1269I	GAATGC	2 cut(s)	220, 321
MvaI	CCWGG	1 cut(s)	1302
MwoI	GCNNNNNNNGC	4 cut(s)	57, 215, 1183, 1202
NciI	CCSGG	2 cut(s)	984, 1119
NdeII	GATC	8 cut(s)	10, 330, 523, 532, 634, 1028, 1398, 1531
NlaIV	GGNNCC	4 cut(s)	12, 225, 621, 1041
NmeAIII	GCCGAG	1 cut(s)	172
NmuCI	GTSAC	2 cut(s)	172, 671
NsbI	TGCGCA	1 cut(s)	1047
NsiI	ATGCAT	1 cut(s)	211
NspI	RCATGY	5 cut(s)	451, 469, 900, 1186, 1250
OliI	CACNNNNGTG	1 cut(s)	448
PagI	TCATGA	1 cut(s)	333
PaqCI	CACCTGC	1 cut(s)	187
PceI	AGGCCT	1 cut(s)	1483
PciI	ACATGT	2 cut(s)	447, 1246
PctI	GAATGC	2 cut(s)	220, 321
PdmI	GAANNNNTTC	2 cut(s)	138, 691
PfeI	GAWTC	2 cut(s)	950, 1171
PflMI	CCANNNNNTGG	1 cut(s)	1337
PleI	GAGTC	2 cut(s)	130, 874
PpsI	GAGTC	2 cut(s)	130, 874
PpuMI	RGGWCCY	2 cut(s)	38, 224
PscI	ACATGT	2 cut(s)	447, 1246
Psp124BI	GAGCTC	1 cut(s)	24
Psp5II	RGGWCCY	2 cut(s)	38, 224
Psp6I	CCWGG	1 cut(s)	1300
PspGI	CCWGG	1 cut(s)	1300
PspN4I	GGNNCC	4 cut(s)	12, 225, 621, 1041
PspPI	GGNCC	3 cut(s)	38, 224, 701
PspPPI	RGGWCCY	2 cut(s)	38, 224
PstI	CTGCAG	2 cut(s)	613, 1201
PsuI	RGATCY	3 cut(s)	10, 523, 1028
RsaI	GTAC	3 cut(s)	293, 1103, 1491
RsaNI	GTAC	3 cut(s)	292, 1102, 1490
RseI	CAYNNNNRTG	3 cut(s)	326, 448, 1251
SacI	GAGCTC	1 cut(s)	24
SaqAI	TTAA	4 cut(s)	431, 1251, 1367, 1455
Sau3AI	GATC	8 cut(s)	10, 330, 523, 532, 634, 1028, 1398, 1531
Sau96I	GGNCC	3 cut(s)	38, 224, 701
SchI	GAGTC	2 cut(s)	131, 875
ScrFI	CCNGG	3 cut(s)	984, 1119, 1302
SduI	GDGCHC	2 cut(s)	24, 767
SexAI	ACCWGGT	1 cut(s)	1300
SfaNI	GCATC	4 cut(s)	196, 1012, 1057, 1299
SfcI	CTRYAG	2 cut(s)	609, 1197
SinI	GGWCC	2 cut(s)	38, 224
SmiMI	CAYNNNNRTG	3 cut(s)	326, 448, 1251
SmlI	CTYRAG	1 cut(s)	1155
SmoI	CTYRAG	1 cut(s)	1155
Sse9I	AATT	6 cut(s)	25, 768, 1206, 1364, 1403, 1499
SseBI	AGGCCT	1 cut(s)	1483
SsiI	CCGC	9 cut(s)	51, 54, 57, 60, 389, 676, 1019, 1280, 1350
SspMI	CTAG	3 cut(s)	528, 1053, 1080
SstI	GAGCTC	1 cut(s)	24
StuI	AGGCCT	1 cut(s)	1483
StyD4I	CCNGG	3 cut(s)	982, 1117, 1300
TaaI	ACNGT	4 cut(s)	364, 514, 816, 1223
TaiI	ACGT	1 cut(s)	492
TaqI	TCGA	2 cut(s)	761, 1459
TaqII	GACCGA	1 cut(s)	169
TasI	AATT	6 cut(s)	25, 768, 1206, 1364, 1403, 1499
TatI	WGTACW	1 cut(s)	291
TauI	GCSGC	4 cut(s)	54, 57, 60, 392
TfiI	GAWTC	2 cut(s)	950, 1171
Tru1I	TTAA	4 cut(s)	431, 1251, 1367, 1455
Tru9I	TTAA	4 cut(s)	431, 1251, 1367, 1455
TscAI	CASTG	3 cut(s)	633, 1241, 1360
TseFI	GTSAC	2 cut(s)	172, 671
TseI	GCWGC	6 cut(s)	608, 611, 1196, 1199, 1202, 1391
Tsp45I	GTSAC	2 cut(s)	172, 671
TspDTI	ATGAA	4 cut(s)	684, 948, 1074, 1314
TspGWI	ACGGA	1 cut(s)	632
TspRI	CASTG	3 cut(s)	633, 1241, 1360
Van91I	CCANNNNNTGG	1 cut(s)	1337
VpaK11BI	GGWCC	2 cut(s)	38, 224
XapI	RAATTY	1 cut(s)	1403
XbaI	TCTAGA	1 cut(s)	1079
XceI	RCATGY	5 cut(s)	451, 469, 900, 1186, 1250
XmnI	GAANNNNTTC	2 cut(s)	138, 691
XspI	CTAG	3 cut(s)	528, 1053, 1080
Zsp2I	ATGCAT	1 cut(s)	211

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.