Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0005778

Physical Location & Seq

Genomic Coordinates Forward (+)

3207500 .. 3212482

Gene Structure 4983 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG047400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGATATGGATCCTAAGGAGCTCAATTTGAACAAAGGACCTGAAGGTTGCGGCGGCGGCGGCGGTGAGGGGTTTATAGATAGGAGCAAGGTGAGGATTTTGCTCTGCGATAACGACGAGTCCAGCTCCGAAGAAGTTCTCAGGCTTCTTTTGAAATGCTCTTATCAAGTCACTTCGGTCAAGTCTCCTCGGCAGGTGATCGATGCATTGAATGCAGAGGGACCTGATATTGATATCATACTTGCCGAAGTCGACCTTCCAATGAGAAAAGGAACCAGAATGTTGAAGTACATCACACGGCATAGAGAGTTGAGGCGCATTCCTGTGATCATGATGTCGGCACAGGATGAGGTCTCTACTGTTGTCAAGTGCCTGAGGCTTGGAGCGGCAGACTATCTTGTAAAGCCTTTACGAACTAATGAGCTTTTAAACTTGTGGACACACATGTGGAGAAGAAGACACATGCTTGGACTTGCAGAGAAGAACGTGTTTAGTTATGACTTTGATACAGTTGTATCAGATCCTAGTGATCCTACTACAAACTCATTCTCGGATGATACAGAAGAGAAGTCTCAGAAGAGTGCCAATCCAGAGATACCTGTTTCTGCTGCCACGGAGCCTCCACTGGATGATCAATTAGAGTTTCAGAGTGATGTTCCAGAAATAAGTGACCGCCAAACTGGAAAGTTTTCATCTGGCCCAAAAAAGAGCGAACTAAAGATTGGGGGGTCATCTGCCTTCTTTACCTATGTCAAATCAAGCACAATTGAAAACAACTCCCAAGTCCATACAAAGGATAATGGTGCTGAACGGTCAAGAGTGGAAGGGAAACATCCAGCATGTAGTCAACGAATGGTTGATGAGTCTCTCCAAGTAGATGGAAATGGAGAAGCATGGGAAAGCTATTCACAAGAAGATGACTTTCCAACCAGTAATAGTATCCCAGATTCTCTTTCATTGGAGAGGTCTTGCACCCCACCTGGTTCAATGGAACTTCAGCATCGGAAGAATCATGCGGAAGACAGATCCTCTCAGGTGCCTGCGCATCCTAGAAATGAACCTCAACACGATGTTTCTAGATTGCCTGCCCATGCTTCGTATCCATACTATATGCCGAGGGTTGTCAATCAGGTTATGGGGTCATCATCAACTCAAGTGTATCAAAAGAATCTGCACGACATGCCAAATCATGCCGCAGCAGCAATTATGCAACATTACAGTCATCTTCCACACTGCCCTCCACATGTTAATGGGATGACTTCATTCTCCTACTATCCGCTTAGTATATGCTTACAACCTGGTCAGATGCCTAACAATCATTCATGGCCATCCCTTGGAAGCTCATCTGCCAGTGAAGTGAAATTAAGTAAGGTTGACAGAAGAGAGGCAGCATTGATTAAATTTAGGCAGAAAAGAAAGGAGCGTTGCTTTGATAAAAAGATTAGGTATGTTAATCGAAAAAGACTTGCTGAAAGGAGGCCTCGTGTACGGGGACAATTTGTGAGGAAGGTAAATGGTGTAGATGTTGATCTCAATGGGCAACCTGCTTCTCTTGATGATGACGAGGATGATGAGGATGAGAAGGATGATGAGGAGCTTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009892 GO:0009987 GO:0010031 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032501 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048511 GO:0048519 GO:0050789 GO:0050794 GO:0050879 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

534

Amino Acids

60.11

Weight (kDa)

5.84

Isoelectric Point (pI)

50.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	33 - 144	2.7e-18	Response regulator receiver domain
CCT	PF06203	461 - 503	3e-15	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61380
fragaria_vesca	FvH4_5g14560
malus_domestica	MD06G1197300.v1.1 MD14G1204700.v1.1
prunus_persica	Prupe.5G197900_v2.0.a1 Prupe.5G198000_v2.0.a1
pyrus_communis	pycom06g17420 pycom06g17430 pycom14g16910
rosa_chinensis	RchiOBHm_Chr7g0182001
rosa_laevigata	RLG00000005156 RLG00000005161
rosa_multiflora	Rmu_co8226389.1_g000001 Rmu_sc0003511.1_g000044 Rmu_sc0017796.1_g000001 Rmu_ssc0000297.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271630
rosa_rugosa	Rorug06G0445000 Rorug06G0445100 Rorug06G0445300
rosa_samantha	Rh7AG047400 Rh7BG047400 Rh7BG047500 Rh7CG047700 Rh7DG046700
rosa_wichuraiana	Rw0G000460 Rw0G019690 Rw7G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	184
Acc16I	TGCGCA	1 cut(s)	1044
Acc36I	ACCTGC	2 cut(s)	184, 1552
AccB1I	GGYRCC	1 cut(s)	1036
AccB7I	CCANNNNNTGG	1 cut(s)	1334
AccBSI	CCGCTC	1 cut(s)	386
AccI	GTMKAC	1 cut(s)	252
AclWI	GGATC	5 cut(s)	5, 18, 515, 524, 1020
AcoI	YGGCCR	1 cut(s)	1325
AcsI	RAATTY	1 cut(s)	1400
AcuI	CTGAAG	2 cut(s)	63, 980
AfaI	GTAC	2 cut(s)	290, 1488
AfiI	CCNNNNNNNGG	2 cut(s)	793, 1334
AflIII	ACRYGT	3 cut(s)	444, 486, 1243
AgsI	TTSAA	6 cut(s)	31, 154, 211, 286, 770, 987
AjnI	CCWGG	2 cut(s)	979, 1297
AjuI	GAANNNNNNNTTGG	2 cut(s)	705, 737
AleI	CACNNNNGTG	1 cut(s)	445
AluBI	AGCT	6 cut(s)	22, 126, 424, 903, 1341, 1597
AluI	AGCT	6 cut(s)	22, 126, 424, 903, 1341, 1597
Alw21I	GWGCWC	1 cut(s)	24
Alw26I	GTCTC	4 cut(s)	189, 358, 576, 870
AlwI	GGATC	5 cut(s)	5, 18, 515, 524, 1020
AoxI	GGCC	3 cut(s)	697, 1325, 1478
ApeKI	GCWGC	4 cut(s)	608, 1196, 1199, 1388
ApoI	RAATTY	1 cut(s)	1400
Asp700I	GAANNNNTTC	2 cut(s)	135, 688
AspLEI	GCGC	2 cut(s)	318, 1045
AspS9I	GGNCC	3 cut(s)	38, 221, 698
AsuHPI	GGTGA	3 cut(s)	77, 103, 208
AvaII	GGWCC	2 cut(s)	38, 221
AxyI	CCTNAGG	2 cut(s)	15, 374
BaeI	ACNNNNGTAYC	4 cut(s)	498, 498, 531, 531
BalI	TGGCCA	1 cut(s)	1327
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	1036
BanII	GRGCYC	1 cut(s)	24
BauI	CACGAG	1 cut(s)	1482
BbsI	GAAGAC	2 cut(s)	463, 1026
Bbv12I	GWGCWC	1 cut(s)	24
BbvI	GCAGC	4 cut(s)	595, 1208, 1211, 1400
BccI	CCATC	2 cut(s)	872, 1336
BceAI	ACGGC	1 cut(s)	314
BciT130I	CCWGG	2 cut(s)	981, 1299
BciVI	GTATCC	2 cut(s)	950, 1110
BclI	TGATCA	2 cut(s)	327, 631
BcoDI	GTCTC	4 cut(s)	189, 358, 576, 870
BfaI	CTAG	3 cut(s)	525, 1050, 1077
BfuAI	ACCTGC	2 cut(s)	184, 1552
BfuI	GTATCC	2 cut(s)	950, 1110
Bme1390I	CCNGG	2 cut(s)	981, 1299
Bme18I	GGWCC	2 cut(s)	38, 221
BmgT120I	GGNCC	3 cut(s)	38, 221, 698
BmiI	GGNNCC	5 cut(s)	12, 222, 274, 618, 1038
BmrFI	CCNGG	2 cut(s)	981, 1299
BmsI	GCATC	4 cut(s)	193, 1009, 1054, 1296
BpiI	GAAGAC	2 cut(s)	463, 1026
BplI	GAGNNNNNCTC	2 cut(s)	110, 142
BpuEI	CTTGAG	1 cut(s)	1137
Bsa29I	ATCGAT	1 cut(s)	201
BsaBI	GATNNNNATC	2 cut(s)	9, 1527
BsaI	GGTCTC	1 cut(s)	358
BsaJI	CCNNGG	4 cut(s)	188, 612, 1115, 1333
BsaXI	ACNNNNNCTCC	5 cut(s)	604, 634, 1468, 1498, 1586
Bsc4I	CCNNNNNNNGG	2 cut(s)	793, 1334
Bse1I	ACTGG	4 cut(s)	630, 685, 930, 1350
Bse21I	CCTNAGG	2 cut(s)	15, 374
Bse8I	GATNNNNATC	2 cut(s)	9, 1527
BseBI	CCWGG	2 cut(s)	981, 1299
BseCI	ATCGAT	1 cut(s)	201
BseDI	CCNNGG	4 cut(s)	188, 612, 1115, 1333
BseJI	GATNNNNATC	2 cut(s)	9, 1527
BseLI	CCNNNNNNNGG	2 cut(s)	793, 1334
BseMII	CTCAG	4 cut(s)	154, 365, 587, 1046
BseNI	ACTGG	4 cut(s)	630, 685, 930, 1350
BseRI	GAGGAG	1 cut(s)	177
BseXI	GCAGC	4 cut(s)	595, 1208, 1211, 1400
BsgI	GTGCAG	1 cut(s)	1157
BshFI	GGCC	3 cut(s)	699, 1327, 1480
BshNI	GGYRCC	1 cut(s)	1036
BshVI	ATCGAT	1 cut(s)	201
BsiHKAI	GWGCWC	1 cut(s)	24
BslFI	GGGAC	2 cut(s)	234, 1506
BslI	CCNNNNNNNGG	2 cut(s)	793, 1334
BsmAI	GTCTC	4 cut(s)	189, 358, 576, 870
BsmFI	GGGAC	2 cut(s)	234, 1506
BsmI	GAATGC	2 cut(s)	217, 318
BsnI	GGCC	3 cut(s)	699, 1327, 1480
Bso31I	GGTCTC	1 cut(s)	358
Bsp1286I	GDGCHC	1 cut(s)	24
Bsp143I	GATC	8 cut(s)	10, 198, 327, 520, 529, 631, 1025, 1528
BspANI	GGCC	3 cut(s)	699, 1327, 1480
BspCNI	CTCAG	4 cut(s)	153, 366, 586, 1045
BspDI	ATCGAT	1 cut(s)	201
BspHI	TCATGA	1 cut(s)	330
BspLI	GGNNCC	5 cut(s)	12, 222, 274, 618, 1038
BspMI	ACCTGC	2 cut(s)	184, 1552
BspPI	GGATC	5 cut(s)	5, 18, 515, 524, 1020
BspT107I	GGYRCC	1 cut(s)	1036
BspTNI	GGTCTC	1 cut(s)	358
BsrBI	CCGCTC	1 cut(s)	386
BsrI	ACTGG	4 cut(s)	630, 685, 930, 1350
BssECI	CCNNGG	4 cut(s)	188, 612, 1115, 1333
BssMI	GATC	8 cut(s)	10, 198, 327, 520, 529, 631, 1025, 1528
BssSI	CACGAG	1 cut(s)	1482
BssT1I	CCWWGG	1 cut(s)	1333
Bst2BI	CACGAG	1 cut(s)	1482
Bst2UI	CCWGG	2 cut(s)	981, 1299
Bst4CI	ACNGT	4 cut(s)	361, 511, 813, 1220
Bst6I	CTCTTC	3 cut(s)	558, 572, 1375
BstAPI	GCANNNNNTGC	2 cut(s)	212, 1180
BstC8I	GCNNGC	3 cut(s)	1041, 1086, 1599
BstDEI	CTNAG	6 cut(s)	15, 140, 374, 573, 1032, 1280
BstDSI	CCRYGG	1 cut(s)	612
BstHHI	GCGC	2 cut(s)	318, 1045
BstKTI	GATC	8 cut(s)	13, 201, 330, 523, 532, 634, 1028, 1531
BstMAI	GTCTC	4 cut(s)	189, 358, 576, 870
BstMBI	GATC	8 cut(s)	10, 198, 327, 520, 529, 631, 1025, 1528
BstMWI	GCNNNNNNNGC	5 cut(s)	57, 60, 212, 1180, 1199
BstNI	CCWGG	2 cut(s)	981, 1299
BstNSI	RCATGY	5 cut(s)	448, 466, 843, 1183, 1247
BstSCI	CCNGG	2 cut(s)	979, 1297
BstV1I	GCAGC	4 cut(s)	595, 1208, 1211, 1400
BstV2I	GAAGAC	2 cut(s)	463, 1026
BstX2I	RGATCY	3 cut(s)	10, 520, 1025
BstXI	CCANNNNNNTGG	1 cut(s)	878
BstYI	RGATCY	3 cut(s)	10, 520, 1025
Bsu15I	ATCGAT	1 cut(s)	201
Bsu36I	CCTNAGG	2 cut(s)	15, 374
BsuI	GTATCC	2 cut(s)	950, 1110
BsuRI	GGCC	3 cut(s)	699, 1327, 1480
BsuTUI	ATCGAT	1 cut(s)	201
BtgI	CCRYGG	1 cut(s)	612
BtsI	GCAGTG	1 cut(s)	1231
BtsIMutI	CAGTG	3 cut(s)	623, 1231, 1357
BveI	ACCTGC	2 cut(s)	184, 1552
Cac8I	GCNNGC	3 cut(s)	1041, 1086, 1599
CciI	TCATGA	1 cut(s)	330
CfoI	GCGC	2 cut(s)	318, 1045
Cfr13I	GGNCC	3 cut(s)	38, 221, 698
ClaI	ATCGAT	1 cut(s)	201
CsiI	ACCWGGT	2 cut(s)	979, 1297
Csp6I	GTAC	2 cut(s)	289, 1487
CviQI	GTAC	2 cut(s)	289, 1487
DdeI	CTNAG	6 cut(s)	15, 140, 374, 573, 1032, 1280
DpnI	GATC	8 cut(s)	12, 200, 329, 522, 531, 633, 1027, 1530
DpnII	GATC	8 cut(s)	10, 198, 327, 520, 529, 631, 1025, 1528
DraI	TTTAAA	1 cut(s)	429
EaeI	YGGCCR	1 cut(s)	1325
Eam1104I	CTCTTC	3 cut(s)	558, 572, 1375
EarI	CTCTTC	3 cut(s)	558, 572, 1375
Ecl136II	GAGCTC	1 cut(s)	22
Eco130I	CCWWGG	1 cut(s)	1333
Eco147I	AGGCCT	1 cut(s)	1480
Eco24I	GRGCYC	1 cut(s)	24
Eco31I	GGTCTC	1 cut(s)	358
Eco32I	GATATC	1 cut(s)	235
Eco47I	GGWCC	2 cut(s)	38, 221
Eco53kI	GAGCTC	1 cut(s)	22
Eco57I	CTGAAG	2 cut(s)	63, 980
Eco81I	CCTNAGG	2 cut(s)	15, 374
EcoICRI	GAGCTC	1 cut(s)	22
EcoO109I	RGGNCCY	2 cut(s)	38, 221
EcoRII	CCWGG	2 cut(s)	979, 1297
EcoRV	GATATC	1 cut(s)	235
EcoT14I	CCWWGG	1 cut(s)	1333
EcoT22I	ATGCAT	1 cut(s)	208
EcoT38I	GRGCYC	1 cut(s)	24
ErhI	CCWWGG	1 cut(s)	1333
FalI	AAGNNNNNCTT	2 cut(s)	240, 272
FaqI	GGGAC	2 cut(s)	234, 1506
FbaI	TGATCA	2 cut(s)	327, 631
FblI	GTMKAC	1 cut(s)	252
FriOI	GRGCYC	1 cut(s)	24
FspBI	CTAG	3 cut(s)	525, 1050, 1077
FspI	TGCGCA	1 cut(s)	1044
GlaI	GCGC	2 cut(s)	317, 1044
HaeIII	GGCC	3 cut(s)	699, 1327, 1480
HhaI	GCGC	2 cut(s)	318, 1045
Hin6I	GCGC	2 cut(s)	316, 1043
HinP1I	GCGC	2 cut(s)	316, 1043
HincII	GTYRAC	3 cut(s)	253, 848, 1375
HindII	GTYRAC	3 cut(s)	253, 848, 1375
HinfI	GANTC	5 cut(s)	119, 863, 947, 1009, 1168
HphI	GGTGA	3 cut(s)	77, 103, 208
Hpy166II	GTNNAC	5 cut(s)	253, 438, 848, 1375, 1487
Hpy188I	TCNGA	7 cut(s)	130, 520, 553, 576, 648, 1005, 1305
Hpy188III	TCNNGA	6 cut(s)	331, 590, 659, 816, 1077, 1553
Hpy8I	GTNNAC	5 cut(s)	253, 438, 848, 1375, 1487
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	6 cut(s)	38, 266, 748, 818, 1501, 1576
HpyCH4III	ACNGT	4 cut(s)	361, 511, 813, 1220
HpyCH4IV	ACGT	1 cut(s)	486
HpyCH4V	TGCA	6 cut(s)	206, 215, 476, 972, 1174, 1210
HpyF10VI	GCNNNNNNNGC	5 cut(s)	57, 60, 212, 1180, 1199
HpyF3I	CTNAG	6 cut(s)	15, 140, 374, 573, 1032, 1280
HpySE526I	ACGT	1 cut(s)	486
HspAI	GCGC	2 cut(s)	316, 1043
Ksp22I	TGATCA	2 cut(s)	327, 631
Kzo9I	GATC	8 cut(s)	10, 198, 327, 520, 529, 631, 1025, 1528
LmnI	GCTCC	7 cut(s)	19, 84, 131, 383, 616, 1420, 1594
Lsp1109I	GCAGC	4 cut(s)	595, 1208, 1211, 1400
LweI	GCATC	4 cut(s)	193, 1009, 1054, 1296
MabI	ACCWGGT	2 cut(s)	979, 1297
MaeI	CTAG	3 cut(s)	525, 1050, 1077
MaeII	ACGT	1 cut(s)	486
MaeIII	GTNAC	2 cut(s)	169, 668
MalI	GATC	8 cut(s)	12, 200, 329, 522, 531, 633, 1027, 1530
MbiI	CCGCTC	1 cut(s)	386
MboI	GATC	8 cut(s)	10, 198, 327, 520, 529, 631, 1025, 1528
MfeI	CAATTG	1 cut(s)	765
MflI	RGATCY	3 cut(s)	10, 520, 1025
MhlI	GDGCHC	1 cut(s)	24
MlsI	TGGCCA	1 cut(s)	1327
MluCI	AATT	7 cut(s)	25, 635, 765, 1203, 1361, 1400, 1496
MluNI	TGGCCA	1 cut(s)	1327
MlyI	GAGTC	2 cut(s)	128, 872
MmeI	TCCRAC	1 cut(s)	950
Mox20I	TGGCCA	1 cut(s)	1327
Mph1103I	ATGCAT	1 cut(s)	208
MroXI	GAANNNNTTC	2 cut(s)	135, 688
MscI	TGGCCA	1 cut(s)	1327
MseI	TTAA	5 cut(s)	428, 1248, 1364, 1398, 1452
MslI	CAYNNNNRTG	3 cut(s)	323, 445, 1248
Msp20I	TGGCCA	1 cut(s)	1327
MspR9I	CCNGG	2 cut(s)	981, 1299
MunI	CAATTG	1 cut(s)	765
Mva1269I	GAATGC	2 cut(s)	217, 318
MvaI	CCWGG	2 cut(s)	981, 1299
MwoI	GCNNNNNNNGC	5 cut(s)	57, 60, 212, 1180, 1199
NdeII	GATC	8 cut(s)	10, 198, 327, 520, 529, 631, 1025, 1528
NlaIV	GGNNCC	5 cut(s)	12, 222, 274, 618, 1038
NmeAIII	GCCGAG	2 cut(s)	169, 1140
NmuCI	GTSAC	2 cut(s)	169, 668
NsbI	TGCGCA	1 cut(s)	1044
NsiI	ATGCAT	1 cut(s)	208
NspI	RCATGY	5 cut(s)	448, 466, 843, 1183, 1247
OliI	CACNNNNGTG	1 cut(s)	445
PagI	TCATGA	1 cut(s)	330
PaqCI	CACCTGC	1 cut(s)	184
PceI	AGGCCT	1 cut(s)	1480
PciI	ACATGT	2 cut(s)	444, 1243
PctI	GAATGC	2 cut(s)	217, 318
PdmI	GAANNNNTTC	2 cut(s)	135, 688
PfeI	GAWTC	3 cut(s)	947, 1009, 1168
PflMI	CCANNNNNTGG	1 cut(s)	1334
PleI	GAGTC	2 cut(s)	127, 871
PpsI	GAGTC	2 cut(s)	127, 871
PpuMI	RGGWCCY	2 cut(s)	38, 221
PscI	ACATGT	2 cut(s)	444, 1243
Psp124BI	GAGCTC	1 cut(s)	24
Psp5II	RGGWCCY	2 cut(s)	38, 221
Psp6I	CCWGG	2 cut(s)	979, 1297
PspGI	CCWGG	2 cut(s)	979, 1297
PspN4I	GGNNCC	5 cut(s)	12, 222, 274, 618, 1038
PspPI	GGNCC	3 cut(s)	38, 221, 698
PspPPI	RGGWCCY	2 cut(s)	38, 221
PsuI	RGATCY	3 cut(s)	10, 520, 1025
RsaI	GTAC	2 cut(s)	290, 1488
RsaNI	GTAC	2 cut(s)	289, 1487
RseI	CAYNNNNRTG	3 cut(s)	323, 445, 1248
SacI	GAGCTC	1 cut(s)	24
SalI	GTCGAC	1 cut(s)	251
SaqAI	TTAA	5 cut(s)	428, 1248, 1364, 1398, 1452
Sau3AI	GATC	8 cut(s)	10, 198, 327, 520, 529, 631, 1025, 1528
Sau96I	GGNCC	3 cut(s)	38, 221, 698
SchI	GAGTC	2 cut(s)	128, 872
ScrFI	CCNGG	2 cut(s)	981, 1299
SduI	GDGCHC	1 cut(s)	24
SexAI	ACCWGGT	2 cut(s)	979, 1297
SfaNI	GCATC	4 cut(s)	193, 1009, 1054, 1296
SinI	GGWCC	2 cut(s)	38, 221
SmiMI	CAYNNNNRTG	3 cut(s)	323, 445, 1248
SmlI	CTYRAG	1 cut(s)	1152
SmoI	CTYRAG	1 cut(s)	1152
Sse9I	AATT	7 cut(s)	25, 635, 765, 1203, 1361, 1400, 1496
SseBI	AGGCCT	1 cut(s)	1480
SspMI	CTAG	3 cut(s)	525, 1050, 1077
SstI	GAGCTC	1 cut(s)	24
StuI	AGGCCT	1 cut(s)	1480
StyD4I	CCNGG	2 cut(s)	979, 1297
StyI	CCWWGG	1 cut(s)	1333
TaaI	ACNGT	4 cut(s)	361, 511, 813, 1220
TaiI	ACGT	1 cut(s)	489
TaqI	TCGA	3 cut(s)	201, 252, 1456
TaqII	GACCGA	1 cut(s)	166
TasI	AATT	7 cut(s)	25, 635, 765, 1203, 1361, 1400, 1496
TatI	WGTACW	1 cut(s)	288
TauI	GCSGC	6 cut(s)	54, 57, 60, 63, 389, 1196
TfiI	GAWTC	3 cut(s)	947, 1009, 1168
Tru1I	TTAA	5 cut(s)	428, 1248, 1364, 1398, 1452
Tru9I	TTAA	5 cut(s)	428, 1248, 1364, 1398, 1452
TscAI	CASTG	3 cut(s)	630, 1238, 1357
TseFI	GTSAC	2 cut(s)	169, 668
TseI	GCWGC	4 cut(s)	608, 1196, 1199, 1388
Tsp45I	GTSAC	2 cut(s)	169, 668
TspDTI	ATGAA	5 cut(s)	681, 945, 1071, 1251, 1311
TspGWI	ACGGA	1 cut(s)	629
TspRI	CASTG	3 cut(s)	630, 1238, 1357
Van91I	CCANNNNNTGG	1 cut(s)	1334
VpaK11BI	GGWCC	2 cut(s)	38, 221
XapI	RAATTY	1 cut(s)	1400
XbaI	TCTAGA	1 cut(s)	1076
XceI	RCATGY	5 cut(s)	448, 466, 843, 1183, 1247
XmiI	GTMKAC	1 cut(s)	252
XmnI	GAANNNNTTC	2 cut(s)	135, 688
XspI	CTAG	3 cut(s)	525, 1050, 1077
Zsp2I	ATGCAT	1 cut(s)	208

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.