Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0005778

Physical Location & Seq

Genomic Coordinates Forward (+)

29253601 .. 29257651

Gene Structure 4051 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1204700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGAGCCGAAGGAGCTGAATTTGAACAGAGAGTCTGAAGCTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTTTGTGGCGTCGGTGGTGGTGCTGATGGGTTCATCGACAGGAGCAGGGTGAGGATTTTACTCTGCGATAACAACGAGTACAGTTCGGAAGAGGTTTTCACGCTTCTTGTGAAATGCTCTTACCAGGTTATTTCCGTGAAGTCTCCTCGACAAGTGATTGATGCATTGAATGCAGAGGGGCCTGATATTGATCTCATACTTGCCGAAGTTGACCTTCCAATGCGCAAAGGCATGAAAATGTTGAAGTACATCACACGGGATAGAGAGTTAAGGCGCATTCCTGTAATCATGATGTCGGCACAAGATGAGGTCTCTACTGTTGTCAAGTGCTTGAAGCTTGGAGCAGCAGACTATCTTGTAAAGCCTTTACGCACAAATGAGCTTCTGAACTTGTGGACACACATGTGGAGAAGAAGGCGCATGCTTGGGCTAGCAGAGAAGAACCTTATAAATTATGTTGATCTGGTGATATCAGACCCTAGCGGATCTAATACGAACAGTACTACTTTATTCTCGGATGATACAGATGATAAATTGGGCAATCCTGAGACAGGAACCTCAGCTCCCGAGGAAGATAAGTCTACTCCTGTTATGGAGCTTCCAGTCGAGAATATATCAGAATTTCGGCCCGATGTTCCAGGAATAAGTGACCGGCAAACTGGAAAGTTTTTATCTGCCCCAAAGAAGAGCGAACTAAAGATTGGCGTTGGCAAGTCATCTGCCTTCTTTACGTATGTGAAATCAAGCAAACTAAAAATCAATCCTCAGGTGGTTGCACATATTGAAGACATTGCCACTGAAAATTTGAGGATAGAAGAGAAACATGAAGAATGTGTTCACCAAGTGGTTGATGATCCCCAAGTACATGGAAATGGAGAGGCGTGGGAAAGCAACTCACAGGGAGATGACTTGCCGAGCAGTAACAGTATCCCAGATTCTCTTTCTTTGGAGAGGTCTAGTACCCCGTCTGGATCAATGGAACTTCAAAATCAGAGCAGTTTTGAGGAAGACAGATCCTCTCTGGTGCCTGCACATCCAAGAAATGAACCTCAACATGATTTTTCTGGCCTACCTGCCCAAGCCGCCTATCAATATTATATGTCGGGAGCTGTCAATCAAGTTATGATGTCATCATCACCCGAAGTTTATCAAAAGAATCTGCATGACATGCAAAATCATGCTATGATGCCGCAATACAATCATTTTCCACACTGCCCTCCACACCTAAATGGGATGGCTTCGTTCCCCTATTATAGTGTATGCTCGCAACCTGGTCAACAAATGCCGAATGCTCAGCCATGGCCATCATTTGGAAGTTCAGCATCCACTGAAGTGAATCTAAATAAGGTTGACAGAAGGGAGGCAGCATTGATTAAATTTAGGCAAAAAAGAAAGGAGCGCTGTTTTGATAAAAAGATCAGGTATGTAAATAGAAAGAAACTTGCCGAAAGGAGACCTCGTGTGCGGGGACAATTTGTGGGGAAGTTAAATGGTGTAAATGTGGATCTTAACGGCGAGCCTGCTTCTGTTGAAGATGATGAGGAGGAGGAGGATGAAAAGGATGACGAGGAGCTTGCATCAAGGGATTCCTCCCCGGAAGATGGTGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009892 GO:0009987 GO:0010031 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032501 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048511 GO:0048519 GO:0050789 GO:0050794 GO:0050879 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

562

Amino Acids

62.34

Weight (kDa)

5.16

Isoelectric Point (pI)

53.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	43 - 154	5.9e-18	Response regulator receiver domain
CCT	PF06203	477 - 518	1.3e-15	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61380
fragaria_vesca	FvH4_5g14560
malus_domestica	MD06G1197300.v1.1 MD14G1204700.v1.1
prunus_persica	Prupe.5G197900_v2.0.a1 Prupe.5G198000_v2.0.a1
pyrus_communis	pycom06g17420 pycom06g17430 pycom14g16910
rosa_chinensis	RchiOBHm_Chr7g0182001
rosa_laevigata	RLG00000005156 RLG00000005161
rosa_multiflora	Rmu_co8226389.1_g000001 Rmu_sc0003511.1_g000044 Rmu_sc0017796.1_g000001 Rmu_ssc0000297.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271630
rosa_rugosa	Rorug06G0445000 Rorug06G0445100 Rorug06G0445300
rosa_samantha	Rh7AG047400 Rh7BG047400 Rh7BG047500 Rh7CG047700 Rh7DG046700
rosa_wichuraiana	Rw0G000460 Rw0G019690 Rw7G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	521
Acc16I	TGCGCA	1 cut(s)	296
Acc36I	ACCTGC	1 cut(s)	1153
AccB1I	GGYRCC	1 cut(s)	1096
AccB7I	CCANNNNNTGG	1 cut(s)	1382
AccI	GTMKAC	1 cut(s)	653
AclWI	GGATC	5 cut(s)	565, 920, 1051, 1080, 1584
AcoI	YGGCCR	1 cut(s)	1373
AcsI	RAATTY	4 cut(s)	19, 692, 874, 1448
AcuI	CTGAAG	2 cut(s)	57, 1422
AcyI	GRCGYC	1 cut(s)	81
AdeI	CACNNNGTG	1 cut(s)	916
AfaI	GTAC	5 cut(s)	152, 320, 574, 936, 1033
AfeI	AGCGCT	1 cut(s)	1472
AfiI	CCNNNNNNNGG	3 cut(s)	623, 1382, 1673
AflIII	ACRYGT	1 cut(s)	474
AgsI	TTSAA	7 cut(s)	25, 241, 316, 406, 857, 1058, 1604
AjnI	CCWGG	3 cut(s)	195, 709, 1342
AjuI	GAANNNNNNNTTGG	2 cut(s)	756, 788
AleI	CACNNNNGTG	2 cut(s)	475, 1403
AloI	GAACNNNNNNTCC	2 cut(s)	619, 651
AluBI	AGCT	8 cut(s)	16, 41, 409, 454, 635, 670, 1181, 1645
AluI	AGCT	8 cut(s)	16, 41, 409, 454, 635, 670, 1181, 1645
Alw26I	GTCTC	4 cut(s)	219, 388, 614, 1519
AlwI	GGATC	5 cut(s)	565, 920, 1051, 1080, 1584
Ama87I	CYCGRG	1 cut(s)	638
Aor51HI	AGCGCT	1 cut(s)	1472
AoxI	GGCC	4 cut(s)	251, 698, 1138, 1373
ApeKI	GCWGC	2 cut(s)	416, 1436
ApoI	RAATTY	4 cut(s)	19, 692, 874, 1448
Asp700I	GAANNNNTTC	1 cut(s)	906
AspLEI	GCGC	4 cut(s)	297, 348, 492, 1473
AspS9I	GGNCC	2 cut(s)	251, 699
AsuC2I	CCSGG	1 cut(s)	1667
AsuHPI	GGTGA	4 cut(s)	133, 550, 902, 1200
AsuNHI	GCTAGC	1 cut(s)	502
AvaI	CYCGRG	1 cut(s)	638
AxyI	CCTNAGG	1 cut(s)	837
BalI	TGGCCA	1 cut(s)	1375
BanI	GGYRCC	1 cut(s)	1096
BauI	CACGAG	1 cut(s)	1530
BbsI	GAAGAC	2 cut(s)	864, 1086
BbvCI	CCTCAGC	1 cut(s)	631
BbvI	GCAGC	2 cut(s)	428, 1448
BccI	CCATC	4 cut(s)	92, 1300, 1384, 1667
BceAI	ACGGC	1 cut(s)	1600
BcgI	CGANNNNNNTGC	2 cut(s)	1628, 1662
BciT130I	CCWGG	3 cut(s)	197, 711, 1344
BciVI	GTATCC	1 cut(s)	1010
BcnI	CCSGG	1 cut(s)	1667
BcoDI	GTCTC	4 cut(s)	219, 388, 614, 1519
BfaI	CTAG	3 cut(s)	503, 552, 1029
BfoI	RGCGCY	1 cut(s)	1474
BfuAI	ACCTGC	1 cut(s)	1153
BfuI	GTATCC	1 cut(s)	1010
BlpI	GCTNAGC	1 cut(s)	1365
BmcAI	AGTACT	1 cut(s)	574
Bme1390I	CCNGG	4 cut(s)	197, 711, 1344, 1667
BmeT110I	CYCGRG	1 cut(s)	638
BmgT120I	GGNCC	2 cut(s)	251, 699
BmiI	GGNNCC	4 cut(s)	6, 252, 628, 1098
BmrFI	CCNGG	4 cut(s)	197, 711, 1344, 1667
BmsI	GCATC	4 cut(s)	223, 1248, 1403, 1658
BmtI	GCTAGC	1 cut(s)	506
BpiI	GAAGAC	2 cut(s)	864, 1086
Bpu10I	CCTNAGC	1 cut(s)	631
Bpu1102I	GCTNAGC	1 cut(s)	1365
BpuMI	CCSGG	1 cut(s)	1667
BsaAI	YACGTR	1 cut(s)	804
BsaBI	GATNNNNATC	1 cut(s)	261
BsaHI	GRCGYC	1 cut(s)	81
BsaI	GGTCTC	2 cut(s)	388, 1519
BsaJI	CCNNGG	3 cut(s)	639, 1370, 1665
BsaXI	ACNNNNNCTCC	4 cut(s)	619, 649, 1516, 1546
Bsc4I	CCNNNNNNNGG	3 cut(s)	623, 1382, 1673
Bse118I	RCCGGY	1 cut(s)	723
Bse1I	ACTGG	2 cut(s)	674, 736
Bse21I	CCTNAGG	1 cut(s)	837
Bse3DI	GCAATG	1 cut(s)	861
Bse8I	GATNNNNATC	1 cut(s)	261
BseBI	CCWGG	3 cut(s)	197, 711, 1344
BseDI	CCNNGG	3 cut(s)	639, 1370, 1665
BseGI	GGATG	6 cut(s)	595, 1105, 1311, 1394, 1630, 1639
BseJI	GATNNNNATC	1 cut(s)	261
BseLI	CCNNNNNNNGG	3 cut(s)	623, 1382, 1673
BseMI	GCAATG	1 cut(s)	861
BseMII	CTCAG	4 cut(s)	609, 645, 851, 1379
BseNI	ACTGG	2 cut(s)	674, 736
BseRI	GAGGAG	5 cut(s)	207, 1628, 1631, 1634, 1655
BseXI	GCAGC	2 cut(s)	428, 1448
BsgI	GTGCAG	1 cut(s)	1086
BshFI	GGCC	4 cut(s)	253, 700, 1140, 1375
BshNI	GGYRCC	1 cut(s)	1096
BsiHKCI	CYCGRG	1 cut(s)	638
BsiSI	CCGG	2 cut(s)	724, 1667
BslFI	GGGAC	1 cut(s)	1554
BslI	CCNNNNNNNGG	3 cut(s)	623, 1382, 1673
BsmAI	GTCTC	4 cut(s)	219, 388, 614, 1519
BsmFI	GGGAC	1 cut(s)	1554
BsmI	GAATGC	3 cut(s)	247, 348, 1366
BsnI	GGCC	4 cut(s)	253, 700, 1140, 1375
Bso31I	GGTCTC	2 cut(s)	388, 1519
BsoBI	CYCGRG	1 cut(s)	638
Bsp143I	GATC	8 cut(s)	262, 532, 557, 925, 1043, 1085, 1488, 1576
Bsp1720I	GCTNAGC	1 cut(s)	1365
Bsp19I	CCATGG	1 cut(s)	1370
BspANI	GGCC	4 cut(s)	253, 700, 1140, 1375
BspCNI	CTCAG	4 cut(s)	610, 644, 850, 1378
BspHI	TCATGA	1 cut(s)	360
BspLI	GGNNCC	4 cut(s)	6, 252, 628, 1098
BspMI	ACCTGC	1 cut(s)	1153
BspOI	GCTAGC	1 cut(s)	506
BspPI	GGATC	5 cut(s)	565, 920, 1051, 1080, 1584
BspQI	GCTCTTC	1 cut(s)	752
BspT107I	GGYRCC	1 cut(s)	1096
BspTNI	GGTCTC	2 cut(s)	388, 1519
BsrDI	GCAATG	1 cut(s)	861
BsrFI	RCCGGY	1 cut(s)	723
BsrI	ACTGG	2 cut(s)	674, 736
BssAI	RCCGGY	1 cut(s)	723
BssECI	CCNNGG	3 cut(s)	639, 1370, 1665
BssMI	GATC	8 cut(s)	262, 532, 557, 925, 1043, 1085, 1488, 1576
BssNI	GRCGYC	1 cut(s)	81
BssSI	CACGAG	1 cut(s)	1530
BssT1I	CCWWGG	1 cut(s)	1370
Bst2BI	CACGAG	1 cut(s)	1530
Bst2UI	CCWGG	3 cut(s)	197, 711, 1344
Bst4CI	ACNGT	4 cut(s)	155, 391, 572, 998
Bst6I	CTCTTC	3 cut(s)	156, 752, 882
BstACI	GRCGYC	1 cut(s)	81
BstAPI	GCANNNNNTGC	2 cut(s)	242, 1240
BstBAI	YACGTR	1 cut(s)	804
BstC8I	GCNNGC	8 cut(s)	43, 494, 504, 1101, 1337, 1589, 1593, 1647
BstDEI	CTNAG	4 cut(s)	618, 631, 837, 1365
BstDSI	CCRYGG	1 cut(s)	1370
BstENI	CCTNNNNNAGG	1 cut(s)	621
BstF5I	GGATG	6 cut(s)	595, 1105, 1311, 1394, 1630, 1639
BstH2I	RGCGCY	1 cut(s)	1474
BstHHI	GCGC	4 cut(s)	297, 348, 492, 1473
BstKTI	GATC	8 cut(s)	265, 535, 560, 928, 1046, 1088, 1491, 1579
BstMAI	GTCTC	4 cut(s)	219, 388, 614, 1519
BstMBI	GATC	8 cut(s)	262, 532, 557, 925, 1043, 1085, 1488, 1576
BstNI	CCWGG	3 cut(s)	197, 711, 1344
BstNSI	RCATGY	3 cut(s)	478, 496, 1243
BstSCI	CCNGG	4 cut(s)	195, 709, 1342, 1665
BstSNI	TACGTA	1 cut(s)	804
BstV1I	GCAGC	2 cut(s)	428, 1448
BstV2I	GAAGAC	2 cut(s)	864, 1086
BstX2I	RGATCY	3 cut(s)	557, 1085, 1576
BstXI	CCANNNNNNTGG	1 cut(s)	938
BstYI	RGATCY	3 cut(s)	557, 1085, 1576
Bsu36I	CCTNAGG	1 cut(s)	837
BsuI	GTATCC	1 cut(s)	1010
BsuRI	GGCC	4 cut(s)	253, 700, 1140, 1375
BtgI	CCRYGG	1 cut(s)	1370
BtsCI	GGATG	6 cut(s)	595, 1105, 1311, 1394, 1630, 1639
BtsI	GCAGTG	1 cut(s)	1282
BtsIMutI	CAGTG	3 cut(s)	867, 1282, 1398
BveI	ACCTGC	1 cut(s)	1153
Cac8I	GCNNGC	8 cut(s)	43, 494, 504, 1101, 1337, 1589, 1593, 1647
CciI	TCATGA	1 cut(s)	360
CfoI	GCGC	4 cut(s)	297, 348, 492, 1473
Cfr10I	RCCGGY	1 cut(s)	723
Cfr13I	GGNCC	2 cut(s)	251, 699
CseI	GACGC	1 cut(s)	70
CsiI	ACCWGGT	2 cut(s)	195, 1342
Csp6I	GTAC	5 cut(s)	151, 319, 573, 935, 1032
CviQI	GTAC	5 cut(s)	151, 319, 573, 935, 1032
DdeI	CTNAG	4 cut(s)	618, 631, 837, 1365
DpnI	GATC	8 cut(s)	264, 534, 559, 927, 1045, 1087, 1490, 1578
DpnII	GATC	8 cut(s)	262, 532, 557, 925, 1043, 1085, 1488, 1576
DraIII	CACNNNGTG	1 cut(s)	916
EaeI	YGGCCR	1 cut(s)	1373
Eam1104I	CTCTTC	3 cut(s)	156, 752, 882
EarI	CTCTTC	3 cut(s)	156, 752, 882
Eco105I	TACGTA	1 cut(s)	804
Eco130I	CCWWGG	1 cut(s)	1370
Eco31I	GGTCTC	2 cut(s)	388, 1519
Eco32I	GATATC	1 cut(s)	543
Eco47III	AGCGCT	1 cut(s)	1472
Eco57I	CTGAAG	2 cut(s)	57, 1422
Eco81I	CCTNAGG	1 cut(s)	837
Eco88I	CYCGRG	1 cut(s)	638
EcoNI	CCTNNNNNAGG	1 cut(s)	621
EcoO109I	RGGNCCY	1 cut(s)	251
EcoRII	CCWGG	3 cut(s)	195, 709, 1342
EcoRV	GATATC	1 cut(s)	543
EcoT14I	CCWWGG	1 cut(s)	1370
EcoT22I	ATGCAT	1 cut(s)	238
ErhI	CCWWGG	1 cut(s)	1370
FalI	AAGNNNNNCTT	2 cut(s)	270, 302
FaqI	GGGAC	1 cut(s)	1554
FauI	CCCGC	1 cut(s)	1530
FblI	GTMKAC	1 cut(s)	653
FokI	GGATG	6 cut(s)	602, 1092, 1318, 1381, 1637, 1646
FspBI	CTAG	3 cut(s)	503, 552, 1029
FspI	TGCGCA	1 cut(s)	296
GlaI	GCGC	4 cut(s)	296, 347, 491, 1472
HaeII	RGCGCY	1 cut(s)	1474
HaeIII	GGCC	4 cut(s)	253, 700, 1140, 1375
HapII	CCGG	2 cut(s)	724, 1667
HgaI	GACGC	1 cut(s)	70
HhaI	GCGC	4 cut(s)	297, 348, 492, 1473
Hin1I	GRCGYC	1 cut(s)	81
Hin6I	GCGC	4 cut(s)	295, 346, 490, 1471
HinP1I	GCGC	4 cut(s)	295, 346, 490, 1471
HincII	GTYRAC	3 cut(s)	283, 1349, 1423
HindII	GTYRAC	3 cut(s)	283, 1349, 1423
HindIII	AAGCTT	1 cut(s)	407
HinfI	GANTC	5 cut(s)	32, 1007, 1228, 1408, 1658
HpaII	CCGG	2 cut(s)	724, 1667
HphI	GGTGA	4 cut(s)	133, 550, 902, 1200
Hpy166II	GTNNAC	6 cut(s)	283, 468, 654, 910, 1349, 1423
Hpy188I	TCNGA	7 cut(s)	37, 160, 459, 547, 589, 691, 1065
Hpy188III	TCNNGA	7 cut(s)	361, 617, 638, 679, 1041, 1176, 1683
Hpy8I	GTNNAC	6 cut(s)	283, 468, 654, 910, 1349, 1423
Hpy99I	CGWCG	1 cut(s)	86
HpyAV	CCTTC	5 cut(s)	4, 296, 480, 805, 1422
HpyCH4III	ACNGT	4 cut(s)	155, 391, 572, 998
HpyCH4IV	ACGT	1 cut(s)	803
HpyCH4V	TGCA	7 cut(s)	236, 245, 848, 1103, 1234, 1243, 1649
HpyF3I	CTNAG	4 cut(s)	618, 631, 837, 1365
HpySE526I	ACGT	1 cut(s)	803
Hsp92I	GRCGYC	1 cut(s)	81
HspAI	GCGC	4 cut(s)	295, 346, 490, 1471
Kzo9I	GATC	8 cut(s)	262, 532, 557, 925, 1043, 1085, 1488, 1576
LguI	GCTCTTC	1 cut(s)	752
LmnI	GCTCC	9 cut(s)	4, 13, 114, 413, 640, 667, 1178, 1468, 1642
Lsp1109I	GCAGC	2 cut(s)	428, 1448
LweI	GCATC	4 cut(s)	223, 1248, 1403, 1658
MabI	ACCWGGT	2 cut(s)	195, 1342
MaeI	CTAG	3 cut(s)	503, 552, 1029
MaeII	ACGT	1 cut(s)	803
MaeIII	GTNAC	2 cut(s)	719, 992
MalI	GATC	8 cut(s)	264, 534, 559, 927, 1045, 1087, 1490, 1578
MboI	GATC	8 cut(s)	262, 532, 557, 925, 1043, 1085, 1488, 1576
MflI	RGATCY	3 cut(s)	557, 1085, 1576
MlsI	TGGCCA	1 cut(s)	1375
MluCI	AATT	7 cut(s)	19, 523, 605, 692, 874, 1448, 1544
MluNI	TGGCCA	1 cut(s)	1375
MlyI	GAGTC	1 cut(s)	41
Mox20I	TGGCCA	1 cut(s)	1375
Mph1103I	ATGCAT	1 cut(s)	238
MroXI	GAANNNNTTC	1 cut(s)	906
MscI	TGGCCA	1 cut(s)	1375
MseI	TTAA	4 cut(s)	341, 1446, 1559, 1581
MslI	CAYNNNNRTG	5 cut(s)	308, 475, 942, 1299, 1403
Msp20I	TGGCCA	1 cut(s)	1375
MspI	CCGG	2 cut(s)	724, 1667
MspR9I	CCNGG	4 cut(s)	197, 711, 1344, 1667
Mva1269I	GAATGC	3 cut(s)	247, 348, 1366
MvaI	CCWGG	3 cut(s)	197, 711, 1344
NciI	CCSGG	1 cut(s)	1667
NcoI	CCATGG	1 cut(s)	1370
NdeII	GATC	8 cut(s)	262, 532, 557, 925, 1043, 1085, 1488, 1576
NheI	GCTAGC	1 cut(s)	502
NlaIV	GGNNCC	4 cut(s)	6, 252, 628, 1098
NmeAIII	GCCGAG	1 cut(s)	1011
NmuCI	GTSAC	1 cut(s)	719
NsbI	TGCGCA	1 cut(s)	296
NsiI	ATGCAT	1 cut(s)	238
NspI	RCATGY	3 cut(s)	478, 496, 1243
OliI	CACNNNNGTG	2 cut(s)	475, 1403
PaeI	GCATGC	1 cut(s)	496
PagI	TCATGA	1 cut(s)	360
PciI	ACATGT	1 cut(s)	474
PciSI	GCTCTTC	1 cut(s)	752
PctI	GAATGC	3 cut(s)	247, 348, 1366
PdmI	GAANNNNTTC	1 cut(s)	906
PfeI	GAWTC	4 cut(s)	1007, 1228, 1408, 1658
PflMI	CCANNNNNTGG	1 cut(s)	1382
PfoI	TCCNGGA	1 cut(s)	709
PleI	GAGTC	1 cut(s)	40
PpsI	GAGTC	1 cut(s)	40
Ppu21I	YACGTR	1 cut(s)	804
PscI	ACATGT	1 cut(s)	474
PsiI	TTATAA	1 cut(s)	521
Psp6I	CCWGG	3 cut(s)	195, 709, 1342
PspGI	CCWGG	3 cut(s)	195, 709, 1342
PspN4I	GGNNCC	4 cut(s)	6, 252, 628, 1098
PspPI	GGNCC	2 cut(s)	251, 699
PsuI	RGATCY	3 cut(s)	557, 1085, 1576
RsaI	GTAC	5 cut(s)	152, 320, 574, 936, 1033
RsaNI	GTAC	5 cut(s)	151, 319, 573, 935, 1032
RseI	CAYNNNNRTG	5 cut(s)	308, 475, 942, 1299, 1403
SapI	GCTCTTC	1 cut(s)	752
SaqAI	TTAA	4 cut(s)	341, 1446, 1559, 1581
Sau3AI	GATC	8 cut(s)	262, 532, 557, 925, 1043, 1085, 1488, 1576
Sau96I	GGNCC	2 cut(s)	251, 699
ScaI	AGTACT	1 cut(s)	574
SchI	GAGTC	1 cut(s)	41
ScrFI	CCNGG	4 cut(s)	197, 711, 1344, 1667
SexAI	ACCWGGT	2 cut(s)	195, 1342
SfaNI	GCATC	4 cut(s)	223, 1248, 1403, 1658
SmiMI	CAYNNNNRTG	5 cut(s)	308, 475, 942, 1299, 1403
SnaBI	TACGTA	1 cut(s)	804
SphI	GCATGC	1 cut(s)	496
Sse9I	AATT	7 cut(s)	19, 523, 605, 692, 874, 1448, 1544
SspI	AATATT	1 cut(s)	1166
SspMI	CTAG	3 cut(s)	503, 552, 1029
StyD4I	CCNGG	4 cut(s)	195, 709, 1342, 1665
StyI	CCWWGG	1 cut(s)	1370
TaaI	ACNGT	4 cut(s)	155, 391, 572, 998
TaiI	ACGT	1 cut(s)	806
TaqI	TCGA	3 cut(s)	108, 220, 678
TasI	AATT	7 cut(s)	19, 523, 605, 692, 874, 1448, 1544
TatI	WGTACW	4 cut(s)	150, 318, 572, 934
TfiI	GAWTC	4 cut(s)	1007, 1228, 1408, 1658
Tru1I	TTAA	4 cut(s)	341, 1446, 1559, 1581
Tru9I	TTAA	4 cut(s)	341, 1446, 1559, 1581
TscAI	CASTG	3 cut(s)	874, 1289, 1405
TseFI	GTSAC	1 cut(s)	719
TseI	GCWGC	2 cut(s)	416, 1436
Tsp45I	GTSAC	1 cut(s)	719
TspDTI	ATGAA	5 cut(s)	94, 320, 912, 1131, 1641
TspGWI	ACGGA	1 cut(s)	196
TspRI	CASTG	3 cut(s)	874, 1289, 1405
Van91I	CCANNNNNTGG	1 cut(s)	1382
XagI	CCTNNNNNAGG	1 cut(s)	621
XapI	RAATTY	4 cut(s)	19, 692, 874, 1448
XceI	RCATGY	3 cut(s)	478, 496, 1243
XmiI	GTMKAC	1 cut(s)	653
XmnI	GAANNNNTTC	1 cut(s)	906
XspI	CTAG	3 cut(s)	503, 552, 1029
ZrmI	AGTACT	1 cut(s)	574
Zsp2I	ATGCAT	1 cut(s)	238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.