FvH4_1g06610

Gamma-glutamyltranspeptidase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
3475066 .. 3478421
3356 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g06610.t2

Sequence Viewer

Length: 1872 bp
ATGGGTCAGCAGAGCCTGGCAGTTCCACTTGTCTCTGAACATAACAAGAAGAGCTGGAAGAGGACTACTAGAGCTCTGTGGATTCTGCTTGCTTTTACAGCAATCATTTTTGTGGGGCTTATATTAGGAGGCTACACAAATGGATGGGTAGTAGTGAGAGATTCAAATAAGGGAATTGGAGCAAATGAATCTGACATTGTTGAGTCAGAGCATGGTGTTGTGGCCGCTGATGATGCCAGGTGTTCTGAAATCGGTGCGTCGATTCTTAGGCAGGGTGGACATGCTGTTGATGCTGCAGTGGCAACAGCATTGTGCCTTGGGGTTGTTAATCCAATGGCAAGTGGAATAGGAGGTGGGGGTTTTATGGTTGTTCGATCTTCAGCAACATTGAAAACGCAAGCTTTCGATATGAGGGAAACTGCTCCTTTAGCTGCTTCACAGAATATGTATGAAAGCAATCCTGAAGCCAAGTTAACAGGTGCATTGTCAATGGGGGTTCCTGGTGAGATTGCTGGTCTACATGAAGCTTGGTTACAACATGGGCGAATGGCGTGGAAGACCTTATTTCAGCCTGCAATAAAACTCGCTAAAGAGGGATTTGAAGTTGCTCCTTATCTTGGAGGACATATACGTTCATGTGAAGAAATGATTATAAAAGACCCTGGCTTAAGGCAAGTGTATGCCCCAAACGGGAAGGTGTTAAAGGCAGGTGATATGTGTTACAATGTGGAACTTGGCAATAGCTTAGAGTCAATTGCAGAACAAGGGCCACAAGCCTTTTACAATGGTAGTCTTGGTGAAAAAATTGTAAAAGATGTGAGAGAGGCTGGTGGGATTTTGACAATGGAGGATTTGAGGACTTACAAAGTGAATGTTACAGATGCCATGACTGCAGATGTGTGGGGATATACTATATCAGGAATGCCACCTCCTTCAGCTGGAACTTTGGGGCTTTCTATGGTTTTGAACATCTTCAACAGCTATGGAAATTCAGATGCAGTAAACGGAGATCTTGGTCTGCATCGTCTAATTGAAGCATTGAAACACATGTTTGCAATCCGAATGAACTTGGGTGATCCTGCTTTTGTTGATACCCATGAATATGCATCTGATATGCTTTCCCCATCCTTTGCAAAAGAAATTCAGCGGAAGATATTTGACAACACAACTTTCCCACCAGAGTACTATTCATACAGGTGGAGTCAGCTCAGAGATCATGGAACAAGTCATTTCTGCATAGTAGATGCAGACAGAAATGCTGTATCAATGACAACCACTGTAAACTATCCTTTTGGAGGTGGAGTACTCTCTCCTTCCACTGGAATTGTGCTCAACAATGAGATGGGTGACTTCTCAATTCCCACTGACATAACTCCAGATCATCTCCCTCCTGCTCCGTCAAATTTCATTGAACCAATCAAAAGACCTTTATCTTCCATGACTCCTATTATAGTCACAAAGGATAATCAATTGGTTGGGGTGCTTGGAGGTAGTGGTGGTCTGAACATTATCCCAGCAGTAACACAGGTGTTTATCAATTATTTTATATTGGGGATGGAACCTTTAGCTGCAGTTCAAAGTCCAAGAGTCTACCACAGGCTAATACCAAACATAGTGTCCTACGAAAACTGGACTGTAATCGATGGAGATCATATCGAGCTTTCAGACGAAAGAAAGCACTTCTTACAGGATCGGGGTCACGAATTGCAGGCTAAAGCCGGGGGAGCCATCACTCAGCTCATTGTTCAAAAACTTGGAAACCCTATACAGATGGGAAGGAAAAGTGGTAAAAGTTCAAATGGAAACGTCTTCCATGGTATACTCACTGCTGTAAGTGACCCTAGAAAGGATGGAAGGCCTGCAGCTGTATGA

Protein Analysis

624

Amino Acids

67.21

Weight (kDa)

5.95

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G_glu_transpept PF01019 62 - 593 2.5e-174 Gamma-glutamyltranspeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 653
AarI CACCTGC 1 cut(s) 698
Acc36I ACCTGC 1 cut(s) 698
AccI GTMKAC 3 cut(s) 517, 1590, 1819
AciI CCGC 2 cut(s) 225, 1147
AclWI GGATC 2 cut(s) 1070, 1698
AcoI YGGCCR 1 cut(s) 222
AcsI RAATTY 3 cut(s) 988, 1140, 1402
AcuI CTGAAG 3 cut(s) 363, 483, 918
AfaI GTAC 2 cut(s) 1184, 1305
AfiI CCNNNNNNNGG 6 cut(s) 617, 690, 938, 1295, 1319, 1846
AflII CTTAAG 1 cut(s) 667
AflIII ACRYGT 1 cut(s) 1047
AjnI CCWGG 4 cut(s) 15, 236, 499, 661
Alw21I GWGCWC 2 cut(s) 76, 1332
Alw26I GTCTC 1 cut(s) 37
AlwI GGATC 2 cut(s) 1070, 1698
AlwNI CAGNNNCTG 1 cut(s) 16
AoxI GGCC 3 cut(s) 222, 767, 1856
ApeKI GCWGC 4 cut(s) 293, 431, 1568, 1862
ApoI RAATTY 3 cut(s) 988, 1140, 1402
ArsI GACNNNNNNTTYG 2 cut(s) 1601, 1633
Asp700I GAANNNNTTC 1 cut(s) 971
AspS9I GGNCC 1 cut(s) 767
AsuC2I CCSGG 1 cut(s) 1720
AsuHPI GGTGA 5 cut(s) 515, 722, 809, 1085, 1358
BanII GRGCYC 1 cut(s) 76
BarI GAAGNNNNNNTAC 2 cut(s) 516, 548
BbsI GAAGAC 2 cut(s) 563, 1801
Bbv12I GWGCWC 2 cut(s) 76, 1332
BbvI GCAGC 3 cut(s) 280, 418, 1555
BccI CCATC 8 cut(s) 138, 1132, 1336, 1549, 1637, 1736, 1765, 1844
BciT130I CCWGG 4 cut(s) 17, 238, 501, 663
BcnI CCSGG 1 cut(s) 1720
BcoDI GTCTC 1 cut(s) 37
BfaI CTAG 2 cut(s) 69, 1842
BfmI CTRYAG 4 cut(s) 294, 891, 1569, 1860
BfrI CTTAAG 1 cut(s) 667
BfuAI ACCTGC 1 cut(s) 698
BglII AGATCT 1 cut(s) 1009
BisI GCNGC 5 cut(s) 225, 294, 432, 1569, 1863
BlsI GCNGC 5 cut(s) 226, 295, 433, 1570, 1864
BmcAI AGTACT 2 cut(s) 1184, 1305
Bme1390I CCNGG 5 cut(s) 17, 238, 501, 663, 1720
BmgT120I GGNCC 1 cut(s) 767
BmiI GGNNCC 3 cut(s) 498, 1560, 1726
BmrFI CCNGG 5 cut(s) 17, 238, 501, 663, 1720
BmsI GCATC 7 cut(s) 223, 280, 871, 985, 1030, 1115, 1234
BpiI GAAGAC 2 cut(s) 563, 1801
BpmI CTGGAG 1 cut(s) 1359
BpuMI CCSGG 1 cut(s) 1720
Bsa29I ATCGAT 1 cut(s) 1641
BsaBI GATNNNNATC 1 cut(s) 1647
BsaJI CCNNGG 4 cut(s) 316, 661, 1719, 1813
BsaXI ACNNNNNCTCC 2 cut(s) 1287, 1317
Bsc4I CCNNNNNNNGG 6 cut(s) 617, 690, 938, 1295, 1319, 1846
Bse1I ACTGG 2 cut(s) 1324, 1634
Bse8I GATNNNNATC 1 cut(s) 1647
BseBI CCWGG 4 cut(s) 17, 238, 501, 663
BseCI ATCGAT 1 cut(s) 1641
BseDI CCNNGG 4 cut(s) 316, 661, 1719, 1813
BseGI GGATG 4 cut(s) 149, 1124, 1560, 1855
BseJI GATNNNNATC 1 cut(s) 1647
BseLI CCNNNNNNNGG 6 cut(s) 617, 690, 938, 1295, 1319, 1846
BseMII CTCAG 2 cut(s) 1222, 1748
BseNI ACTGG 2 cut(s) 1324, 1634
BseXI GCAGC 3 cut(s) 280, 418, 1555
BseYI CCCAGC 1 cut(s) 1513
BshFI GGCC 3 cut(s) 224, 769, 1858
BshVI ATCGAT 1 cut(s) 1641
BsiHKAI GWGCWC 2 cut(s) 76, 1332
BsiSI CCGG 1 cut(s) 1719
BslI CCNNNNNNNGG 6 cut(s) 617, 690, 938, 1295, 1319, 1846
BsmAI GTCTC 1 cut(s) 37
BsmI GAATGC 1 cut(s) 927
BsnI GGCC 3 cut(s) 224, 769, 1858
Bsp1286I GDGCHC 2 cut(s) 76, 1332
Bsp143I GATC 7 cut(s) 374, 1009, 1075, 1213, 1378, 1648, 1690
Bsp19I CCATGG 1 cut(s) 1813
BspACI CCGC 2 cut(s) 225, 1147
BspANI GGCC 3 cut(s) 224, 769, 1858
BspCNI CTCAG 2 cut(s) 1221, 1747
BspDI ATCGAT 1 cut(s) 1641
BspLI GGNNCC 3 cut(s) 498, 1560, 1726
BspMAI CTGCAG 4 cut(s) 298, 895, 1573, 1864
BspMI ACCTGC 1 cut(s) 698
BspPI GGATC 2 cut(s) 1070, 1698
BspQI GCTCTTC 1 cut(s) 44
BspTI CTTAAG 1 cut(s) 667
BsrI ACTGG 2 cut(s) 1324, 1634
BssECI CCNNGG 4 cut(s) 316, 661, 1719, 1813
BssMI GATC 7 cut(s) 374, 1009, 1075, 1213, 1378, 1648, 1690
BssNAI GTATAC 1 cut(s) 1820
BssT1I CCWWGG 2 cut(s) 316, 1813
Bst1107I GTATAC 1 cut(s) 1820
Bst2UI CCWGG 4 cut(s) 17, 238, 501, 663
Bst4CI ACNGT 2 cut(s) 1279, 1636
Bst6I CTCTTC 2 cut(s) 44, 53
BstAFI CTTAAG 1 cut(s) 667
BstC8I GCNNGC 5 cut(s) 90, 399, 573, 1710, 1860
BstDEI CTNAG 4 cut(s) 266, 745, 1208, 1734
BstDSI CCRYGG 1 cut(s) 1813
BstENI CCTNNNNNAGG 1 cut(s) 1293
BstF5I GGATG 4 cut(s) 149, 1124, 1560, 1855
BstKTI GATC 7 cut(s) 377, 1012, 1078, 1216, 1381, 1651, 1693
BstMAI GTCTC 1 cut(s) 37
BstMBI GATC 7 cut(s) 374, 1009, 1075, 1213, 1378, 1648, 1690
BstMWI GCNNNNNNNGC 7 cut(s) 98, 233, 290, 299, 428, 890, 1724
BstNI CCWGG 4 cut(s) 17, 238, 501, 663
BstNSI RCATGY 2 cut(s) 284, 1051
BstSCI CCNGG 5 cut(s) 15, 236, 499, 661, 1718
BstSFI CTRYAG 4 cut(s) 294, 891, 1569, 1860
BstV1I GCAGC 3 cut(s) 280, 418, 1555
BstV2I GAAGAC 2 cut(s) 563, 1801
BstX2I RGATCY 1 cut(s) 1009
BstYI RGATCY 1 cut(s) 1009
BstZ17I GTATAC 1 cut(s) 1820
Bsu15I ATCGAT 1 cut(s) 1641
BsuRI GGCC 3 cut(s) 224, 769, 1858
BsuTUI ATCGAT 1 cut(s) 1641
BtgI CCRYGG 1 cut(s) 1813
BtsCI GGATG 4 cut(s) 149, 1124, 1560, 1855
BtsI GCAGTG 2 cut(s) 303, 1824
BtsIMutI CAGTG 5 cut(s) 303, 1275, 1317, 1362, 1824
BveI ACCTGC 1 cut(s) 698
Cac8I GCNNGC 5 cut(s) 90, 399, 573, 1710, 1860
CaiI CAGNNNCTG 1 cut(s) 16
Cfr13I GGNCC 1 cut(s) 767
ClaI ATCGAT 1 cut(s) 1641
CseI GACGC 1 cut(s) 246
Csp6I GTAC 2 cut(s) 1183, 1304
CspCI CAANNNNNGTGG 2 cut(s) 1306, 1341
CviQI GTAC 2 cut(s) 1183, 1304
DdeI CTNAG 4 cut(s) 266, 745, 1208, 1734
DpnI GATC 7 cut(s) 376, 1011, 1077, 1215, 1380, 1650, 1692
DpnII GATC 7 cut(s) 374, 1009, 1075, 1213, 1378, 1648, 1690
EaeI YGGCCR 1 cut(s) 222
Eam1104I CTCTTC 2 cut(s) 44, 53
EarI CTCTTC 2 cut(s) 44, 53
Ecl136II GAGCTC 1 cut(s) 74
Eco130I CCWWGG 2 cut(s) 316, 1813
Eco147I AGGCCT 1 cut(s) 1858
Eco24I GRGCYC 1 cut(s) 76
Eco53kI GAGCTC 1 cut(s) 74
Eco57I CTGAAG 3 cut(s) 363, 483, 918
EcoICRI GAGCTC 1 cut(s) 74
EcoNI CCTNNNNNAGG 1 cut(s) 1293
EcoRII CCWGG 4 cut(s) 15, 236, 499, 661
EcoT14I CCWWGG 2 cut(s) 316, 1813
EcoT22I ATGCAT 1 cut(s) 1108
EcoT38I GRGCYC 1 cut(s) 76
ErhI CCWWGG 2 cut(s) 316, 1813
FalI AAGNNNNNCTT 2 cut(s) 1667, 1699
FblI GTMKAC 3 cut(s) 517, 1590, 1819
Fnu4HI GCNGC 5 cut(s) 225, 294, 432, 1569, 1863
FokI GGATG 4 cut(s) 156, 1111, 1567, 1862
FriOI GRGCYC 1 cut(s) 76
Fsp4HI GCNGC 5 cut(s) 225, 294, 432, 1569, 1863
FspBI CTAG 2 cut(s) 69, 1842
GluI GCNGC 5 cut(s) 225, 294, 432, 1569, 1863
GsaI CCCAGC 1 cut(s) 1517
GsuI CTGGAG 1 cut(s) 1359
HaeIII GGCC 3 cut(s) 224, 769, 1858
HapII CCGG 1 cut(s) 1719
HgaI GACGC 1 cut(s) 246
HincII GTYRAC 1 cut(s) 474
HindII GTYRAC 1 cut(s) 474
HindIII AAGCTT 2 cut(s) 399, 525
HinfI GANTC 9 cut(s) 82, 161, 188, 203, 262, 749, 1201, 1441, 1587
HpaI GTTAAC 1 cut(s) 474
HpaII CCGG 1 cut(s) 1719
HphI GGTGA 5 cut(s) 515, 722, 809, 1085, 1358
Hpy166II GTNNAC 7 cut(s) 278, 474, 518, 1003, 1282, 1591, 1820
Hpy188III TCNNGA 4 cut(s) 461, 918, 1376, 1700
Hpy8I GTNNAC 7 cut(s) 278, 474, 518, 1003, 1282, 1591, 1820
Hpy99I CGWCG 1 cut(s) 262
HpyAV CCTTC 5 cut(s) 688, 942, 1323, 1770, 1848
HpyCH4III ACNGT 2 cut(s) 1279, 1636
HpyCH4IV ACGT 2 cut(s) 631, 1806
HpyF10VI GCNNNNNNNGC 7 cut(s) 98, 233, 290, 299, 428, 890, 1724
HpyF3I CTNAG 4 cut(s) 266, 745, 1208, 1734
HpySE526I ACGT 2 cut(s) 631, 1806
KspAI GTTAAC 1 cut(s) 474
Kzo9I GATC 7 cut(s) 374, 1009, 1075, 1213, 1378, 1648, 1690
LguI GCTCTTC 1 cut(s) 44
LmnI GCTCC 5 cut(s) 179, 427, 613, 1399, 1724
Lsp1109I GCAGC 3 cut(s) 280, 418, 1555
LweI GCATC 7 cut(s) 223, 280, 871, 985, 1030, 1115, 1234
MaeI CTAG 2 cut(s) 69, 1842
MaeII ACGT 2 cut(s) 631, 1806
MaeIII GTNAC 8 cut(s) 531, 719, 874, 1346, 1453, 1519, 1697, 1835
MalI GATC 7 cut(s) 376, 1011, 1077, 1215, 1380, 1650, 1692
MboI GATC 7 cut(s) 374, 1009, 1075, 1213, 1378, 1648, 1690
MboII GAAGA 9 cut(s) 61, 70, 369, 568, 653, 964, 1162, 1425, 1801
MfeI CAATTG 2 cut(s) 753, 1469
MflI RGATCY 1 cut(s) 1009
MhlI GDGCHC 2 cut(s) 76, 1332
MlyI GAGTC 5 cut(s) 212, 758, 1210, 1435, 1596
Mph1103I ATGCAT 1 cut(s) 1108
MroXI GAANNNNTTC 1 cut(s) 971
MseI TTAA 4 cut(s) 327, 473, 668, 701
MslI CAYNNNNRTG 3 cut(s) 110, 1101, 1195
MspA1I CMGCKG 4 cut(s) 227, 938, 1147, 1865
MspCI CTTAAG 1 cut(s) 667
MspI CCGG 1 cut(s) 1719
MspR9I CCNGG 5 cut(s) 17, 238, 501, 663, 1720
MunI CAATTG 2 cut(s) 753, 1469
Mva1269I GAATGC 1 cut(s) 927
MvaI CCWGG 4 cut(s) 17, 238, 501, 663
MwoI GCNNNNNNNGC 7 cut(s) 98, 233, 290, 299, 428, 890, 1724
NciI CCSGG 1 cut(s) 1720
NcoI CCATGG 1 cut(s) 1813
NdeII GATC 7 cut(s) 374, 1009, 1075, 1213, 1378, 1648, 1690
NlaIV GGNNCC 3 cut(s) 498, 1560, 1726
NmuCI GTSAC 4 cut(s) 1346, 1453, 1697, 1835
NsiI ATGCAT 1 cut(s) 1108
NspI RCATGY 2 cut(s) 284, 1051
PaqCI CACCTGC 1 cut(s) 698
PceI AGGCCT 1 cut(s) 1858
PciI ACATGT 1 cut(s) 1047
PciSI GCTCTTC 1 cut(s) 44
PctI GAATGC 1 cut(s) 927
PdmI GAANNNNTTC 1 cut(s) 971
PfeI GAWTC 4 cut(s) 82, 161, 188, 262
PkrI GCNGC 5 cut(s) 226, 295, 433, 1570, 1864
PleI GAGTC 5 cut(s) 211, 757, 1209, 1435, 1595
PpsI GAGTC 5 cut(s) 211, 757, 1209, 1435, 1595
PscI ACATGT 1 cut(s) 1047
PsiI TTATAA 1 cut(s) 653
Psp124BI GAGCTC 1 cut(s) 76
Psp6I CCWGG 4 cut(s) 15, 236, 499, 661
PspFI CCCAGC 1 cut(s) 1513
PspGI CCWGG 4 cut(s) 15, 236, 499, 661
PspN4I GGNNCC 3 cut(s) 498, 1560, 1726
PspPI GGNCC 1 cut(s) 767
PstI CTGCAG 4 cut(s) 298, 895, 1573, 1864
PstNI CAGNNNCTG 1 cut(s) 16
PsuI RGATCY 1 cut(s) 1009
PvuII CAGCTG 2 cut(s) 938, 1865
RsaI GTAC 2 cut(s) 1184, 1305
RsaNI GTAC 2 cut(s) 1183, 1304
RseI CAYNNNNRTG 3 cut(s) 110, 1101, 1195
SacI GAGCTC 1 cut(s) 76
SapI GCTCTTC 1 cut(s) 44
SaqAI TTAA 4 cut(s) 327, 473, 668, 701
SatI GCNGC 5 cut(s) 225, 294, 432, 1569, 1863
Sau3AI GATC 7 cut(s) 374, 1009, 1075, 1213, 1378, 1648, 1690
Sau96I GGNCC 1 cut(s) 767
ScaI AGTACT 2 cut(s) 1184, 1305
SchI GAGTC 5 cut(s) 212, 758, 1210, 1435, 1596
ScrFI CCNGG 5 cut(s) 17, 238, 501, 663, 1720
SduI GDGCHC 2 cut(s) 76, 1332
SfaNI GCATC 7 cut(s) 223, 280, 871, 985, 1030, 1115, 1234
SfcI CTRYAG 4 cut(s) 294, 891, 1569, 1860
SmiMI CAYNNNNRTG 3 cut(s) 110, 1101, 1195
SmlI CTYRAG 1 cut(s) 667
SmoI CTYRAG 1 cut(s) 667
SseBI AGGCCT 1 cut(s) 1858
SsiI CCGC 2 cut(s) 225, 1147
SspMI CTAG 2 cut(s) 69, 1842
SstI GAGCTC 1 cut(s) 76
StuI AGGCCT 1 cut(s) 1858
StyD4I CCNGG 5 cut(s) 15, 236, 499, 661, 1718
StyI CCWWGG 2 cut(s) 316, 1813
TaaI ACNGT 2 cut(s) 1279, 1636
TaiI ACGT 2 cut(s) 634, 1809
TaqI TCGA 5 cut(s) 260, 373, 405, 1641, 1656
TatI WGTACW 2 cut(s) 1182, 1303
TauI GCSGC 1 cut(s) 227
TfiI GAWTC 4 cut(s) 82, 161, 188, 262
Tru1I TTAA 4 cut(s) 327, 473, 668, 701
Tru9I TTAA 4 cut(s) 327, 473, 668, 701
TscAI CASTG 5 cut(s) 303, 1282, 1324, 1369, 1831
TseFI GTSAC 4 cut(s) 1346, 1453, 1697, 1835
TseI GCWGC 4 cut(s) 293, 431, 1568, 1862
Tsp45I GTSAC 4 cut(s) 1346, 1453, 1697, 1835
TspDTI ATGAA 8 cut(s) 201, 465, 537, 624, 1079, 1113, 1179, 1396
TspGWI ACGGA 2 cut(s) 1020, 1386
TspRI CASTG 5 cut(s) 303, 1282, 1324, 1369, 1831
Vha464I CTTAAG 1 cut(s) 667
XagI CCTNNNNNAGG 1 cut(s) 1293
XapI RAATTY 3 cut(s) 988, 1140, 1402
XceI RCATGY 2 cut(s) 284, 1051
XmiI GTMKAC 3 cut(s) 517, 1590, 1819
XmnI GAANNNNTTC 1 cut(s) 971
XspI CTAG 2 cut(s) 69, 1842
ZrmI AGTACT 2 cut(s) 1184, 1305
Zsp2I ATGCAT 1 cut(s) 1108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.