RchiOBHm_Chr2g0092341

Gamma-glutamyltranspeptidase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
5800786 .. 5803948
3163 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46745

Sequence Viewer

Length: 1878 bp
ATGGGTCAGCAGAGCTTGGCAACTCCACTTGTGTCTGATAACAACAACAAGAGCTGGAACAGGAATGCTAGAGCGCTGTGGATTCTGCTTGCTTTTACAGCAATCATTTTTGTGGGGCTTATTTTTGGTGGCAACGGCAACACAAATGGCTGGGTAGTACTGAGAGAATCAGATAAGGGGATTGGAGCAAATGAATCTGACATTGTTGAGTCAGAGCACGGTGTTGTTGCTGCTGATGATGCCAGGTGTTCCAAAATCGGTGCATCGATTCTTAGGCAGGGTGGGCATGCTGTTGATGCTTCAGTGGCAACAGCATTGTGCCTTGGCGTTGTTAATCCGATGTCAAGTGGAATAGGAGGTGGGGGGTTTATGGTTGTCAGATCTTCAGCAACCTCGAAAACCCAAGCTTTCGATATGAGGGAAACTGCTCCTTCAGCTGCTTCACAGAATATGTATGAAAGCAATGCTGAAGCCAAGTTATATGGTGCATTGTCAATGGGGGTTCCTGGTGAGATTGCTGGTCTACATGAAGCATGGTTACAACATGGGCGAATGGCGTGGAGGACTTTATTTCAGCCTGCAATAAAGCTCGCTAAAGAGGGATTTGAAGTTGCTCCTTGTCTTGGAGGACATATACGTTCATGTGAAGAAATGATTATAAAAGACCCTGGCTTAAGGCAAGTGTTTGCCCCAAACGGGAAGGTGTTAAAAGCAGGTGATAAGTGTTATAATGTGGAACTTGGCAATAGCTTAGAGGCAATTGCAGAACTGGGGCCACAAGCCTTCTACAACGGTAGTCTTGGTGAAAAAATTGTAAAAGATGTGAGAGAGGCTGGTGGGATTTTGACAATGGAGGATTTGAGGAATTACAAAGTGAATGTTACGGATGCCATGACTGCAAATGTGTTGGGATATACTATATCAGGAATGCCACCTCCTTCAGCTGGAACTTTGGGGCTTTCTATGATTCTGAACATCTTCAACAGCTACGGAAATTCAGATGCAGCAAACGGAGATCTTGGTCTGCATCGTCTGATTGAAGCATTGAAACACATGTTTGCAATCCGAATGAACTTGGGTGATCCTGCTTTTGTAGATACCCATGAATATGCATCTGACATGCTTTCTCCATCCTTTGCTAAGGAAATTCAGCAGAAGATATTTGACAACACAACTTTCCCACCAGAGTACTATTCATACAGGTGGAGTCAGCTCAGAGATCACGGAACAAGTCATTTCTGCATAGTAGATGCAGATAGAAATGCGGTATCAATGACAACCACTGTAAACTATCCTTTTGGAGGTGGAGTACTCTCTCCTTCTACTGGAATTGTGCTCAACAATGAGATGGGTGACTTCTCAATTCCCACTGACATATCGCCAGACCATCTCCCTCCTGCTCCGTCAAATTTCATTGAACCAATCAAAAGACCTTTATCTTCCATGACTCCTATAATAGTCACAAAGGATAATCAATTGGTTGGTGCGCTTGGAGGTAGTGGTGGTTTGAACATTATCCCAGCTGTAACTCAAGTGTTTATCAATTATTTCATATTGGGGATGGAACCTTTAGCCGCAGTTCAAAGTCCAAGGGTCTACCACAGGCTAATACCAAACATAGTGTCCTATGAAAACTGGACTGTAATCGATGGAGATCATATCGAGCTTTCAGACGAAAGAAAGCTCTTCTTGCAGGAGCGGGGTCATGAATTGCAGGCTAAAGCCGGGGGAGCCATCACTCAGCTCATTGTTCAAAGACTTGGAAACCCTATTCAGATGGGCAGGAAATGTGGTAGAAGTTCAAATGAAAACGTTTTCCATGGTATACTCACAGCTGTAAGTGACCCCAGAAAAGATGGAAGGCCTGCAGCTGTATGA

Protein Analysis

625

Amino Acids

67.23

Weight (kDa)

5.79

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G_glu_transpept PF01019 89 - 620 4.8e-173 Gamma-glutamyltranspeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 659, 729
AarI CACCTGC 1 cut(s) 704
Acc36I ACCTGC 1 cut(s) 704
AccBSI CCGCTC 1 cut(s) 1699
AccI GTMKAC 3 cut(s) 523, 1596, 1825
AciI CCGC 3 cut(s) 1265, 1575, 1699
AclI AACGTT 1 cut(s) 1812
AclWI GGATC 1 cut(s) 1076
AcsI RAATTY 3 cut(s) 994, 1146, 1408
AcuI CTGAAG 5 cut(s) 285, 369, 417, 489, 924
AfaI GTAC 3 cut(s) 159, 1190, 1311
AfeI AGCGCT 1 cut(s) 75
AfiI CCNNNNNNNGG 5 cut(s) 623, 696, 944, 1301, 1325
AflII CTTAAG 1 cut(s) 673
AflIII ACRYGT 1 cut(s) 1053
AgsI TTSAA 9 cut(s) 608, 982, 1040, 1048, 1418, 1510, 1583, 1754, 1803
AjnI CCWGG 3 cut(s) 242, 505, 667
Alw21I GWGCWC 2 cut(s) 219, 1338
AlwI GGATC 1 cut(s) 1076
Aor51HI AGCGCT 1 cut(s) 75
AoxI GGCC 2 cut(s) 773, 1862
ApeKI GCWGC 4 cut(s) 230, 437, 1004, 1868
ApoI RAATTY 3 cut(s) 994, 1146, 1408
ArsI GACNNNNNNTTYG 2 cut(s) 1607, 1639
Asp700I GAANNNNTTC 1 cut(s) 977
AspLEI GCGC 2 cut(s) 76, 1489
AspS9I GGNCC 1 cut(s) 773
AsuC2I CCSGG 1 cut(s) 1726
AsuHPI GGTGA 5 cut(s) 521, 728, 815, 1091, 1364
BarI GAAGNNNNNNTAC 2 cut(s) 522, 554
Bbv12I GWGCWC 2 cut(s) 219, 1338
BbvI GCAGC 3 cut(s) 217, 424, 1016
BccI CCATC 8 cut(s) 1138, 1342, 1395, 1555, 1643, 1742, 1771, 1850
BceAI ACGGC 1 cut(s) 151
BciT130I CCWGG 3 cut(s) 244, 507, 669
BcnI CCSGG 1 cut(s) 1726
BfaI CTAG 1 cut(s) 69
BfmI CTRYAG 1 cut(s) 1866
BfoI RGCGCY 1 cut(s) 77
BfrI CTTAAG 1 cut(s) 673
BfuAI ACCTGC 1 cut(s) 704
BglII AGATCT 2 cut(s) 380, 1015
BisI GCNGC 5 cut(s) 231, 438, 1005, 1575, 1869
BlsI GCNGC 5 cut(s) 232, 439, 1006, 1576, 1870
BmcAI AGTACT 3 cut(s) 159, 1190, 1311
Bme1390I CCNGG 4 cut(s) 244, 507, 669, 1726
BmgT120I GGNCC 1 cut(s) 773
BmiI GGNNCC 4 cut(s) 504, 774, 1566, 1732
BmrFI CCNGG 4 cut(s) 244, 507, 669, 1726
BmrI ACTGGG 1 cut(s) 779
BmsI GCATC 8 cut(s) 229, 272, 286, 877, 991, 1036, 1121, 1240
BmuI ACTGGG 1 cut(s) 779
Bpu10I CCTNAGC 1 cut(s) 1140
BpuEI CTTGAG 1 cut(s) 1515
BpuMI CCSGG 1 cut(s) 1726
Bsa29I ATCGAT 2 cut(s) 266, 1647
BsaBI GATNNNNATC 1 cut(s) 1653
BsaJI CCNNGG 5 cut(s) 322, 667, 1589, 1725, 1819
BsaXI ACNNNNNCTCC 2 cut(s) 1293, 1323
Bsc4I CCNNNNNNNGG 5 cut(s) 623, 696, 944, 1301, 1325
Bse1I ACTGG 3 cut(s) 774, 1330, 1640
Bse3DI GCAATG 1 cut(s) 469
Bse8I GATNNNNATC 1 cut(s) 1653
BseBI CCWGG 3 cut(s) 244, 507, 669
BseCI ATCGAT 2 cut(s) 266, 1647
BseDI CCNNGG 5 cut(s) 322, 667, 1589, 1725, 1819
BseGI GGATG 3 cut(s) 892, 1130, 1566
BseJI GATNNNNATC 1 cut(s) 1653
BseLI CCNNNNNNNGG 5 cut(s) 623, 696, 944, 1301, 1325
BseMI GCAATG 1 cut(s) 469
BseMII CTCAG 3 cut(s) 152, 1228, 1754
BseNI ACTGG 3 cut(s) 774, 1330, 1640
BseXI GCAGC 3 cut(s) 217, 424, 1016
BseYI CCCAGC 2 cut(s) 150, 1519
BshFI GGCC 2 cut(s) 775, 1864
BshVI ATCGAT 2 cut(s) 266, 1647
BsiHKAI GWGCWC 2 cut(s) 219, 1338
BsiSI CCGG 1 cut(s) 1725
BslI CCNNNNNNNGG 5 cut(s) 623, 696, 944, 1301, 1325
BsmI GAATGC 2 cut(s) 70, 933
BsnI GGCC 2 cut(s) 775, 1864
Bsp1286I GDGCHC 2 cut(s) 219, 1338
Bsp143I GATC 5 cut(s) 380, 1015, 1081, 1219, 1654
Bsp19I CCATGG 1 cut(s) 1819
BspACI CCGC 3 cut(s) 1265, 1575, 1699
BspANI GGCC 2 cut(s) 775, 1864
BspCNI CTCAG 3 cut(s) 153, 1227, 1753
BspDI ATCGAT 2 cut(s) 266, 1647
BspHI TCATGA 1 cut(s) 1705
BspLI GGNNCC 4 cut(s) 504, 774, 1566, 1732
BspMAI CTGCAG 1 cut(s) 1870
BspMI ACCTGC 1 cut(s) 704
BspPI GGATC 1 cut(s) 1076
BspQI GCTCTTC 1 cut(s) 1691
BspTI CTTAAG 1 cut(s) 673
BsrBI CCGCTC 1 cut(s) 1699
BsrDI GCAATG 1 cut(s) 469
BsrI ACTGG 3 cut(s) 774, 1330, 1640
BssECI CCNNGG 5 cut(s) 322, 667, 1589, 1725, 1819
BssMI GATC 5 cut(s) 380, 1015, 1081, 1219, 1654
BssNAI GTATAC 1 cut(s) 1826
BssT1I CCWWGG 3 cut(s) 322, 1589, 1819
Bst1107I GTATAC 1 cut(s) 1826
Bst2UI CCWGG 3 cut(s) 244, 507, 669
Bst4CI ACNGT 4 cut(s) 221, 794, 1285, 1642
Bst6I CTCTTC 1 cut(s) 1691
BstAFI CTTAAG 1 cut(s) 673
BstC8I GCNNGC 6 cut(s) 90, 288, 579, 591, 1716, 1866
BstDEI CTNAG 6 cut(s) 161, 272, 751, 1140, 1214, 1740
BstDSI CCRYGG 1 cut(s) 1819
BstENI CCTNNNNNAGG 1 cut(s) 1299
BstF5I GGATG 3 cut(s) 892, 1130, 1566
BstH2I RGCGCY 1 cut(s) 77
BstHHI GCGC 2 cut(s) 76, 1489
BstKTI GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
BstMBI GATC 5 cut(s) 380, 1015, 1081, 1219, 1654
BstMWI GCNNNNNNNGC 9 cut(s) 98, 239, 283, 296, 305, 434, 896, 1690, 1730
BstNI CCWGG 3 cut(s) 244, 507, 669
BstNSI RCATGY 3 cut(s) 290, 1057, 1123
BstSCI CCNGG 4 cut(s) 242, 505, 667, 1724
BstSFI CTRYAG 1 cut(s) 1866
BstV1I GCAGC 3 cut(s) 217, 424, 1016
BstX2I RGATCY 2 cut(s) 380, 1015
BstYI RGATCY 2 cut(s) 380, 1015
BstZ17I GTATAC 1 cut(s) 1826
Bsu15I ATCGAT 2 cut(s) 266, 1647
BsuRI GGCC 2 cut(s) 775, 1864
BsuTUI ATCGAT 2 cut(s) 266, 1647
BtgI CCRYGG 1 cut(s) 1819
BtsCI GGATG 3 cut(s) 892, 1130, 1566
BtsIMutI CAGTG 3 cut(s) 309, 1281, 1368
BveI ACCTGC 1 cut(s) 704
Cac8I GCNNGC 6 cut(s) 90, 288, 579, 591, 1716, 1866
CciI TCATGA 1 cut(s) 1705
CfoI GCGC 2 cut(s) 76, 1489
Cfr13I GGNCC 1 cut(s) 773
ClaI ATCGAT 2 cut(s) 266, 1647
Csp6I GTAC 3 cut(s) 158, 1189, 1310
CviQI GTAC 3 cut(s) 158, 1189, 1310
DdeI CTNAG 6 cut(s) 161, 272, 751, 1140, 1214, 1740
DpnI GATC 5 cut(s) 382, 1017, 1083, 1221, 1656
DpnII GATC 5 cut(s) 380, 1015, 1081, 1219, 1654
Eam1104I CTCTTC 1 cut(s) 1691
EarI CTCTTC 1 cut(s) 1691
Eco130I CCWWGG 3 cut(s) 322, 1589, 1819
Eco147I AGGCCT 1 cut(s) 1864
Eco47III AGCGCT 1 cut(s) 75
Eco57I CTGAAG 5 cut(s) 285, 369, 417, 489, 924
EcoNI CCTNNNNNAGG 1 cut(s) 1299
EcoRII CCWGG 3 cut(s) 242, 505, 667
EcoT14I CCWWGG 3 cut(s) 322, 1589, 1819
EcoT22I ATGCAT 1 cut(s) 1114
ErhI CCWWGG 3 cut(s) 322, 1589, 1819
FalI AAGNNNNNCTT 2 cut(s) 1673, 1705
FauI CCCGC 1 cut(s) 1692
FblI GTMKAC 3 cut(s) 523, 1596, 1825
Fnu4HI GCNGC 5 cut(s) 231, 438, 1005, 1575, 1869
FokI GGATG 3 cut(s) 899, 1117, 1573
Fsp4HI GCNGC 5 cut(s) 231, 438, 1005, 1575, 1869
FspBI CTAG 1 cut(s) 69
GlaI GCGC 2 cut(s) 75, 1488
GluI GCNGC 5 cut(s) 231, 438, 1005, 1575, 1869
GsaI CCCAGC 2 cut(s) 154, 1523
HaeII RGCGCY 1 cut(s) 77
HaeIII GGCC 2 cut(s) 775, 1864
HapII CCGG 1 cut(s) 1725
HhaI GCGC 2 cut(s) 76, 1489
Hin6I GCGC 2 cut(s) 74, 1487
HinP1I GCGC 2 cut(s) 74, 1487
HindIII AAGCTT 1 cut(s) 405
HinfI GANTC 8 cut(s) 82, 167, 194, 209, 268, 967, 1207, 1447
HpaII CCGG 1 cut(s) 1725
HphI GGTGA 5 cut(s) 521, 728, 815, 1091, 1364
Hpy166II GTNNAC 4 cut(s) 524, 1288, 1597, 1826
Hpy188III TCNNGA 2 cut(s) 924, 1706
Hpy8I GTNNAC 4 cut(s) 524, 1288, 1597, 1826
HpyAV CCTTC 6 cut(s) 441, 694, 793, 948, 1329, 1854
HpyCH4III ACNGT 4 cut(s) 221, 794, 1285, 1642
HpyCH4IV ACGT 2 cut(s) 637, 1812
HpyF10VI GCNNNNNNNGC 9 cut(s) 98, 239, 283, 296, 305, 434, 896, 1690, 1730
HpyF3I CTNAG 6 cut(s) 161, 272, 751, 1140, 1214, 1740
HpySE526I ACGT 2 cut(s) 637, 1812
HspAI GCGC 2 cut(s) 74, 1487
Kzo9I GATC 5 cut(s) 380, 1015, 1081, 1219, 1654
LguI GCTCTTC 1 cut(s) 1691
LmnI GCTCC 6 cut(s) 185, 433, 619, 1405, 1696, 1730
Lsp1109I GCAGC 3 cut(s) 217, 424, 1016
LweI GCATC 8 cut(s) 229, 272, 286, 877, 991, 1036, 1121, 1240
MaeI CTAG 1 cut(s) 69
MaeII ACGT 2 cut(s) 637, 1812
MaeIII GTNAC 6 cut(s) 537, 880, 1352, 1459, 1525, 1841
MalI GATC 5 cut(s) 382, 1017, 1083, 1221, 1656
MbiI CCGCTC 1 cut(s) 1699
MboI GATC 5 cut(s) 380, 1015, 1081, 1219, 1654
MboII GAAGA 6 cut(s) 375, 659, 970, 1168, 1431, 1678
MfeI CAATTG 2 cut(s) 759, 1475
MflI RGATCY 2 cut(s) 380, 1015
MhlI GDGCHC 2 cut(s) 219, 1338
MlyI GAGTC 3 cut(s) 218, 1216, 1441
Mph1103I ATGCAT 1 cut(s) 1114
MroXI GAANNNNTTC 1 cut(s) 977
MseI TTAA 3 cut(s) 333, 674, 707
MslI CAYNNNNRTG 3 cut(s) 110, 1107, 1201
MspA1I CMGCKG 5 cut(s) 437, 944, 1523, 1835, 1871
MspCI CTTAAG 1 cut(s) 673
MspI CCGG 1 cut(s) 1725
MspR9I CCNGG 4 cut(s) 244, 507, 669, 1726
MunI CAATTG 2 cut(s) 759, 1475
Mva1269I GAATGC 2 cut(s) 70, 933
MvaI CCWGG 3 cut(s) 244, 507, 669
MwoI GCNNNNNNNGC 9 cut(s) 98, 239, 283, 296, 305, 434, 896, 1690, 1730
NciI CCSGG 1 cut(s) 1726
NcoI CCATGG 1 cut(s) 1819
NdeII GATC 5 cut(s) 380, 1015, 1081, 1219, 1654
NlaIV GGNNCC 4 cut(s) 504, 774, 1566, 1732
NmuCI GTSAC 3 cut(s) 1352, 1459, 1841
NsiI ATGCAT 1 cut(s) 1114
NspI RCATGY 3 cut(s) 290, 1057, 1123
PaeI GCATGC 1 cut(s) 290
PagI TCATGA 1 cut(s) 1705
PaqCI CACCTGC 1 cut(s) 704
PceI AGGCCT 1 cut(s) 1864
PciI ACATGT 1 cut(s) 1053
PciSI GCTCTTC 1 cut(s) 1691
PctI GAATGC 2 cut(s) 70, 933
PdmI GAANNNNTTC 1 cut(s) 977
PfeI GAWTC 5 cut(s) 82, 167, 194, 268, 967
PkrI GCNGC 5 cut(s) 232, 439, 1006, 1576, 1870
PleI GAGTC 3 cut(s) 217, 1215, 1441
PpsI GAGTC 3 cut(s) 217, 1215, 1441
PscI ACATGT 1 cut(s) 1053
PsiI TTATAA 2 cut(s) 659, 729
Psp1406I AACGTT 1 cut(s) 1812
Psp6I CCWGG 3 cut(s) 242, 505, 667
PspFI CCCAGC 2 cut(s) 150, 1519
PspGI CCWGG 3 cut(s) 242, 505, 667
PspN4I GGNNCC 4 cut(s) 504, 774, 1566, 1732
PspPI GGNCC 1 cut(s) 773
PstI CTGCAG 1 cut(s) 1870
PsuI RGATCY 2 cut(s) 380, 1015
PvuII CAGCTG 5 cut(s) 437, 944, 1523, 1835, 1871
RsaI GTAC 3 cut(s) 159, 1190, 1311
RsaNI GTAC 3 cut(s) 158, 1189, 1310
RseI CAYNNNNRTG 3 cut(s) 110, 1107, 1201
SapI GCTCTTC 1 cut(s) 1691
SaqAI TTAA 3 cut(s) 333, 674, 707
SatI GCNGC 5 cut(s) 231, 438, 1005, 1575, 1869
Sau3AI GATC 5 cut(s) 380, 1015, 1081, 1219, 1654
Sau96I GGNCC 1 cut(s) 773
ScaI AGTACT 3 cut(s) 159, 1190, 1311
SchI GAGTC 3 cut(s) 218, 1216, 1441
ScrFI CCNGG 4 cut(s) 244, 507, 669, 1726
SduI GDGCHC 2 cut(s) 219, 1338
SfaNI GCATC 8 cut(s) 229, 272, 286, 877, 991, 1036, 1121, 1240
SfcI CTRYAG 1 cut(s) 1866
SmiMI CAYNNNNRTG 3 cut(s) 110, 1107, 1201
SmlI CTYRAG 2 cut(s) 673, 1530
SmoI CTYRAG 2 cut(s) 673, 1530
SphI GCATGC 1 cut(s) 290
SseBI AGGCCT 1 cut(s) 1864
SsiI CCGC 3 cut(s) 1265, 1575, 1699
SspMI CTAG 1 cut(s) 69
StuI AGGCCT 1 cut(s) 1864
StyD4I CCNGG 4 cut(s) 242, 505, 667, 1724
StyI CCWWGG 3 cut(s) 322, 1589, 1819
TaaI ACNGT 4 cut(s) 221, 794, 1285, 1642
TaiI ACGT 2 cut(s) 640, 1815
TaqI TCGA 5 cut(s) 266, 395, 411, 1647, 1662
TatI WGTACW 3 cut(s) 157, 1188, 1309
TauI GCSGC 1 cut(s) 1577
TfiI GAWTC 5 cut(s) 82, 167, 194, 268, 967
Tru1I TTAA 3 cut(s) 333, 674, 707
Tru9I TTAA 3 cut(s) 333, 674, 707
TscAI CASTG 3 cut(s) 309, 1288, 1375
TseFI GTSAC 3 cut(s) 1352, 1459, 1841
TseI GCWGC 4 cut(s) 230, 437, 1004, 1868
Tsp45I GTSAC 3 cut(s) 1352, 1459, 1841
TspGWI ACGGA 5 cut(s) 899, 1005, 1026, 1239, 1392
TspRI CASTG 3 cut(s) 309, 1288, 1375
Vha464I CTTAAG 1 cut(s) 673
XagI CCTNNNNNAGG 1 cut(s) 1299
XapI RAATTY 3 cut(s) 994, 1146, 1408
XceI RCATGY 3 cut(s) 290, 1057, 1123
XmiI GTMKAC 3 cut(s) 523, 1596, 1825
XmnI GAANNNNTTC 1 cut(s) 977
XspI CTAG 1 cut(s) 69
ZrmI AGTACT 3 cut(s) 159, 1190, 1311
Zsp2I ATGCAT 1 cut(s) 1114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.