Rmu_sc0000461.1_g000012

Gamma-glutamyltranspeptidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000461.1
Physical Location & Seq
Forward (+)
56428 .. 56915
488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000461.1_g000012.1.cds

Sequence Viewer

Length: 387 bp
atggaggatttgaggaattacaaagtgaatgttatggatgccatgactgcaaatgtgttgggatatactatatcaggaatgccacctccttcagctggaactttggggttttctatgattctgaacatcttcaacagctatggaaattcaaatgcagcaaacggagatcttggtctgcatcgtctgattgaagcattgaaacacatgtttgcaatccgaatgaacttgggtgatcctgcttttgtagatacccatgaatatgcatctgatatgctttctccgtcctttgttaaagaaattcagcagaagatatttgacaacacaactttcccaccaaagtactattcatacaggcatgatcacccaacattttatagtctaaattag

Protein Analysis

128

Amino Acids

14.43

Weight (kDa)

5.87

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 227
AcsI RAATTY 2 cut(s) 145, 297
AcuI CTGAAG 1 cut(s) 75
AfaI GTAC 1 cut(s) 341
AfiI CCNNNNNNNGG 1 cut(s) 95
AflIII ACRYGT 1 cut(s) 204
AgsI TTSAA 4 cut(s) 133, 150, 191, 199
AjuI GAANNNNNNNTTGG 2 cut(s) 328, 360
AluBI AGCT 2 cut(s) 95, 138
AluI AGCT 2 cut(s) 95, 138
AlwI GGATC 1 cut(s) 227
ApeKI GCWGC 1 cut(s) 155
ApoI RAATTY 2 cut(s) 145, 297
Asp700I GAANNNNTTC 1 cut(s) 128
AsuHPI GGTGA 2 cut(s) 242, 353
BbvI GCAGC 1 cut(s) 167
BclI TGATCA 1 cut(s) 358
BglII AGATCT 1 cut(s) 166
BisI GCNGC 1 cut(s) 156
BlsI GCNGC 1 cut(s) 157
BmcAI AGTACT 1 cut(s) 341
BmsI GCATC 3 cut(s) 28, 187, 272
Bsc4I CCNNNNNNNGG 1 cut(s) 95
BseGI GGATG 1 cut(s) 43
BseLI CCNNNNNNNGG 1 cut(s) 95
BseXI GCAGC 1 cut(s) 167
BslI CCNNNNNNNGG 1 cut(s) 95
BsmI GAATGC 1 cut(s) 84
Bsp143I GATC 3 cut(s) 166, 232, 358
BspPI GGATC 1 cut(s) 227
BssMI GATC 3 cut(s) 166, 232, 358
BstF5I GGATG 1 cut(s) 43
BstKTI GATC 3 cut(s) 169, 235, 361
BstMBI GATC 3 cut(s) 166, 232, 358
BstMWI GCNNNNNNNGC 1 cut(s) 47
BstNSI RCATGY 1 cut(s) 208
BstV1I GCAGC 1 cut(s) 167
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
BtsCI GGATG 1 cut(s) 43
Csp6I GTAC 1 cut(s) 340
CviAII CATG 4 cut(s) 43, 205, 254, 356
CviJI RGCY 2 cut(s) 95, 138
CviKI_1 RGCY 2 cut(s) 95, 138
CviQI GTAC 1 cut(s) 340
DpnI GATC 3 cut(s) 168, 234, 360
DpnII GATC 3 cut(s) 166, 232, 358
Eco57I CTGAAG 1 cut(s) 75
EcoT22I ATGCAT 1 cut(s) 265
FaeI CATG 4 cut(s) 46, 208, 257, 359
FatI CATG 4 cut(s) 42, 204, 253, 355
FbaI TGATCA 1 cut(s) 358
Fnu4HI GCNGC 1 cut(s) 156
FokI GGATG 1 cut(s) 50
Fsp4HI GCNGC 1 cut(s) 156
GluI GCNGC 1 cut(s) 156
Hin1II CATG 4 cut(s) 46, 208, 257, 359
HinfI GANTC 1 cut(s) 118
HphI GGTGA 2 cut(s) 242, 353
Hpy188I TCNGA 4 cut(s) 123, 186, 218, 268
Hpy188III TCNNGA 1 cut(s) 75
HpyAV CCTTC 1 cut(s) 99
HpyCH4V TGCA 5 cut(s) 50, 155, 178, 212, 263
HpyF10VI GCNNNNNNNGC 1 cut(s) 47
Hsp92II CATG 4 cut(s) 46, 208, 257, 359
Ksp22I TGATCA 1 cut(s) 358
Kzo9I GATC 3 cut(s) 166, 232, 358
LpnPI CCDG 4 cut(s) 60, 81, 249, 337
Lsp1109I GCAGC 1 cut(s) 167
LweI GCATC 3 cut(s) 28, 187, 272
MalI GATC 3 cut(s) 168, 234, 360
MboI GATC 3 cut(s) 166, 232, 358
MboII GAAGA 2 cut(s) 121, 319
MflI RGATCY 1 cut(s) 166
MluCI AATT 4 cut(s) 16, 145, 297, 382
MnlI CCTC 2 cut(s) 6, 96
Mph1103I ATGCAT 1 cut(s) 265
MroXI GAANNNNTTC 1 cut(s) 128
MseI TTAA 1 cut(s) 291
MslI CAYNNNNRTG 1 cut(s) 258
MspA1I CMGCKG 1 cut(s) 95
Mva1269I GAATGC 1 cut(s) 84
MwoI GCNNNNNNNGC 1 cut(s) 47
NdeII GATC 3 cut(s) 166, 232, 358
NlaIII CATG 4 cut(s) 46, 208, 257, 359
NsiI ATGCAT 1 cut(s) 265
NspI RCATGY 1 cut(s) 208
PciI ACATGT 1 cut(s) 204
PctI GAATGC 1 cut(s) 84
PdmI GAANNNNTTC 1 cut(s) 128
PfeI GAWTC 1 cut(s) 118
PkrI GCNGC 1 cut(s) 157
PscI ACATGT 1 cut(s) 204
PsuI RGATCY 1 cut(s) 166
PvuII CAGCTG 1 cut(s) 95
RsaI GTAC 1 cut(s) 341
RsaNI GTAC 1 cut(s) 340
RseI CAYNNNNRTG 1 cut(s) 258
SaqAI TTAA 1 cut(s) 291
SatI GCNGC 1 cut(s) 156
Sau3AI GATC 3 cut(s) 166, 232, 358
ScaI AGTACT 1 cut(s) 341
SetI ASST 3 cut(s) 88, 97, 140
SfaNI GCATC 3 cut(s) 28, 187, 272
SmiMI CAYNNNNRTG 1 cut(s) 258
Sse9I AATT 4 cut(s) 16, 145, 297, 382
TasI AATT 4 cut(s) 16, 145, 297, 382
TatI WGTACW 1 cut(s) 339
TfiI GAWTC 1 cut(s) 118
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
TseI GCWGC 1 cut(s) 155
TspDTI ATGAA 3 cut(s) 236, 270, 336
TspGWI ACGGA 2 cut(s) 177, 270
XapI RAATTY 2 cut(s) 145, 297
XceI RCATGY 1 cut(s) 208
XmnI GAANNNNTTC 1 cut(s) 128
ZrmI AGTACT 1 cut(s) 341
Zsp2I ATGCAT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.