Rorug02G0025000

Gamma-glutamyltranspeptidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
1978401 .. 1979200
800 bp
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UTR
Exon/CDS
Intron
Rorug02G0025000.1

Sequence Viewer

Length: 306 bp
ATGAGTCTTGAGGAATCCAAGAAAACCGTTGTTTCAGTCGGGCCGTTTGGAGAAAATAAGCGAGTAATACCCTTTGATGATGGAGTACACTCAGCAGTGAAAGGTTTGGAGATGGTCCATTTGAAAGGTGAAAGGGGACATATTCAAAACGTCCGGTTTGAATATGAAGACGACGGAATCTCAGTTTGGGGAGACAAGCATGGTACAAATATCATTTGGGATGTCTTAATGGCAGGGCTGGCAACCGACGGCGAGATGAGAAGAGAATGCGTATATACTTTATCCACACACTTGTATATTCGTTAG

Protein Analysis

101

Amino Acids

11.4

Weight (kDa)

5.67

Isoelectric Point (pI)

34.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 87, 205
AgsI TTSAA 3 cut(s) 124, 146, 161
AjuI GAANNNNNNNTTGG 2 cut(s) 169, 201
Alw26I GTCTC 1 cut(s) 186
AoxI GGCC 1 cut(s) 41
AspS9I GGNCC 2 cut(s) 41, 115
AsuHPI GGTGA 1 cut(s) 140
AvaII GGWCC 1 cut(s) 115
BbsI GAAGAC 1 cut(s) 174
BccI CCATC 2 cut(s) 74, 106
BceAI ACGGC 2 cut(s) 28, 265
BcoDI GTCTC 1 cut(s) 186
Bme18I GGWCC 1 cut(s) 115
BmgT120I GGNCC 2 cut(s) 41, 115
BpiI GAAGAC 1 cut(s) 174
BpuEI CTTGAG 1 cut(s) 29
BsaWI WCCGGW 1 cut(s) 153
BseGI GGATG 1 cut(s) 226
BseMII CTCAG 2 cut(s) 105, 195
BshFI GGCC 1 cut(s) 43
BsiSI CCGG 1 cut(s) 154
BslFI GGGAC 1 cut(s) 150
BsmAI GTCTC 1 cut(s) 186
BsmFI GGGAC 1 cut(s) 150
BsmI GAATGC 1 cut(s) 272
BsnI GGCC 1 cut(s) 43
BspANI GGCC 1 cut(s) 43
BspCNI CTCAG 2 cut(s) 104, 194
Bst4CI ACNGT 1 cut(s) 28
Bst6I CTCTTC 1 cut(s) 256
BstC8I GCNNGC 1 cut(s) 240
BstDEI CTNAG 2 cut(s) 91, 181
BstF5I GGATG 1 cut(s) 226
BstMAI GTCTC 1 cut(s) 186
BstMWI GCNNNNNNNGC 1 cut(s) 239
BstV2I GAAGAC 1 cut(s) 174
BsuRI GGCC 1 cut(s) 43
BtsCI GGATG 1 cut(s) 226
BtsI GCAGTG 1 cut(s) 102
BtsIMutI CAGTG 1 cut(s) 102
Cac8I GCNNGC 1 cut(s) 240
Cfr13I GGNCC 2 cut(s) 41, 115
Csp6I GTAC 2 cut(s) 86, 204
CviAII CATG 1 cut(s) 200
CviJI RGCY 2 cut(s) 43, 238
CviKI_1 RGCY 2 cut(s) 43, 238
CviQI GTAC 2 cut(s) 86, 204
DdeI CTNAG 2 cut(s) 91, 181
Eam1104I CTCTTC 1 cut(s) 256
EarI CTCTTC 1 cut(s) 256
Eco47I GGWCC 1 cut(s) 115
FaeI CATG 1 cut(s) 203
FaiI YATR 6 cut(s) 141, 165, 201, 274, 276, 297
FaqI GGGAC 1 cut(s) 150
FatI CATG 1 cut(s) 199
FokI GGATG 1 cut(s) 233
HaeIII GGCC 1 cut(s) 43
HapII CCGG 1 cut(s) 154
Hin1II CATG 1 cut(s) 203
HinfI GANTC 3 cut(s) 4, 14, 177
HpaII CCGG 1 cut(s) 154
HphI GGTGA 1 cut(s) 140
Hpy166II GTNNAC 1 cut(s) 88
Hpy188III TCNNGA 1 cut(s) 8
Hpy8I GTNNAC 1 cut(s) 88
Hpy99I CGWCG 2 cut(s) 176, 251
HpyCH4III ACNGT 1 cut(s) 28
HpyCH4IV ACGT 1 cut(s) 150
HpyF10VI GCNNNNNNNGC 1 cut(s) 239
HpyF3I CTNAG 2 cut(s) 91, 181
HpySE526I ACGT 1 cut(s) 150
Hsp92II CATG 1 cut(s) 203
LpnPI CCDG 3 cut(s) 167, 219, 224
MaeII ACGT 1 cut(s) 150
MboII GAAGA 2 cut(s) 179, 273
MlyI GAGTC 1 cut(s) 13
MnlI CCTC 1 cut(s) 4
MseI TTAA 1 cut(s) 227
MspI CCGG 1 cut(s) 154
Mva1269I GAATGC 1 cut(s) 272
MwoI GCNNNNNNNGC 1 cut(s) 239
NlaIII CATG 1 cut(s) 203
PctI GAATGC 1 cut(s) 272
PfeI GAWTC 2 cut(s) 14, 177
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PspPI GGNCC 2 cut(s) 41, 115
RsaI GTAC 2 cut(s) 87, 205
RsaNI GTAC 2 cut(s) 86, 204
SaqAI TTAA 1 cut(s) 227
Sau96I GGNCC 2 cut(s) 41, 115
SchI GAGTC 1 cut(s) 13
SetI ASST 3 cut(s) 106, 130, 153
SinI GGWCC 1 cut(s) 115
SmlI CTYRAG 1 cut(s) 8
SmoI CTYRAG 1 cut(s) 8
TaaI ACNGT 1 cut(s) 28
TaiI ACGT 1 cut(s) 153
TatI WGTACW 1 cut(s) 85
TfiI GAWTC 2 cut(s) 14, 177
Tru1I TTAA 1 cut(s) 227
Tru9I TTAA 1 cut(s) 227
TscAI CASTG 1 cut(s) 102
TspDTI ATGAA 1 cut(s) 180
TspGWI ACGGA 1 cut(s) 189
TspRI CASTG 1 cut(s) 102
VpaK11BI GGWCC 1 cut(s) 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.