Rh1DG061100

Gamma-glutamyltranspeptidase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
10694582 .. 10696003
1422 bp
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UTR
Exon/CDS
Intron
Rh1DG061100.1

Sequence Viewer

Length: 564 bp
ATGGAGGATTTGAGGAATTACAAAGTGAATGTTACGGATGCCATGACTGCAAATATGTTGGGATATACTATATCAGGAATGCCACCTCCTTCAGCTGGAACTTTGTGGTTTTCTATGATTCTGAACATCTTCAACAGCTATGGAAATTCAGATGCAGCAAACGGAGATCTTGGTCTGCATCGTCTGATTGAAGCATTGAAACACATGTTTGCAATCCGAATGAACTTGGGTGATCCTGCTTTTGATAATCAATTGGTTGGTGTGCTTGGAGGTAGTGGTGGTTTGAACATTATCCCAGCTGTAACTCAGGTGTTTATCAATTATTTCATATTGGGGATGGAACCTTTAGCCGCAGTTCAAAGTCCAAGGGTCTACCACAGGGAGCGGGGTCATGAATTGCAGGCTAAAGCCGAGGGAGCCATCACTCAGCTCATTGTTCAAAGACTTGGAAACCCTATTCAAATGGGCAGGAAATGTGGTAGAAGTTCAAATGAAAATGTTTTCCATGGTATACTCACTGCTGTAAGTGACCCTAGAAAAGATGGAAGGCCTGCAGCTGTATGA

Protein Analysis

187

Amino Acids

20.29

Weight (kDa)

7.93

Isoelectric Point (pI)

35.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G_glu_transpept PF01019 2 - 83 1.9e-16 Gamma-glutamyltranspeptidase
G_glu_transpept PF01019 83 - 182 2.3e-11 Gamma-glutamyltranspeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 385
AccI GTMKAC 2 cut(s) 372, 511
AciI CCGC 2 cut(s) 351, 385
AclWI GGATC 1 cut(s) 227
AcsI RAATTY 1 cut(s) 145
AcuI CTGAAG 1 cut(s) 75
AfiI CCNNNNNNNGG 1 cut(s) 95
AflIII ACRYGT 1 cut(s) 204
AgsI TTSAA 8 cut(s) 133, 191, 199, 286, 359, 440, 461, 489
AluBI AGCT 5 cut(s) 95, 138, 299, 430, 557
AluI AGCT 5 cut(s) 95, 138, 299, 430, 557
AlwI GGATC 1 cut(s) 227
AoxI GGCC 1 cut(s) 548
ApeKI GCWGC 2 cut(s) 155, 554
ApoI RAATTY 1 cut(s) 145
Asp700I GAANNNNTTC 1 cut(s) 128
AsuHPI GGTGA 1 cut(s) 242
BbvI GCAGC 1 cut(s) 167
BccI CCATC 3 cut(s) 331, 428, 536
BfaI CTAG 1 cut(s) 534
BfmI CTRYAG 1 cut(s) 552
BglII AGATCT 1 cut(s) 166
BisI GCNGC 3 cut(s) 156, 351, 555
BlsI GCNGC 3 cut(s) 157, 352, 556
BmiI GGNNCC 2 cut(s) 342, 418
BmsI GCATC 3 cut(s) 28, 142, 187
BsaJI CCNNGG 3 cut(s) 365, 411, 505
Bsc4I CCNNNNNNNGG 1 cut(s) 95
BseDI CCNNGG 3 cut(s) 365, 411, 505
BseGI GGATG 2 cut(s) 43, 342
BseLI CCNNNNNNNGG 1 cut(s) 95
BseMII CTCAG 2 cut(s) 320, 440
BseXI GCAGC 1 cut(s) 167
BseYI CCCAGC 1 cut(s) 295
BshFI GGCC 1 cut(s) 550
BslI CCNNNNNNNGG 1 cut(s) 95
BsmI GAATGC 1 cut(s) 84
BsnI GGCC 1 cut(s) 550
Bsp143I GATC 2 cut(s) 166, 232
Bsp19I CCATGG 1 cut(s) 505
BspACI CCGC 2 cut(s) 351, 385
BspANI GGCC 1 cut(s) 550
BspCNI CTCAG 2 cut(s) 319, 439
BspHI TCATGA 1 cut(s) 391
BspLI GGNNCC 2 cut(s) 342, 418
BspMAI CTGCAG 1 cut(s) 556
BspPI GGATC 1 cut(s) 227
BsrBI CCGCTC 1 cut(s) 385
BssECI CCNNGG 3 cut(s) 365, 411, 505
BssMI GATC 2 cut(s) 166, 232
BssNAI GTATAC 1 cut(s) 512
BssT1I CCWWGG 2 cut(s) 365, 505
Bst1107I GTATAC 1 cut(s) 512
BstC8I GCNNGC 2 cut(s) 402, 552
BstDEI CTNAG 2 cut(s) 306, 426
BstDSI CCRYGG 1 cut(s) 505
BstF5I GGATG 2 cut(s) 43, 342
BstKTI GATC 2 cut(s) 169, 235
BstMBI GATC 2 cut(s) 166, 232
BstMWI GCNNNNNNNGC 2 cut(s) 47, 416
BstNSI RCATGY 1 cut(s) 208
BstSFI CTRYAG 1 cut(s) 552
BstV1I GCAGC 1 cut(s) 167
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
BstZ17I GTATAC 1 cut(s) 512
BsuRI GGCC 1 cut(s) 550
BtgI CCRYGG 1 cut(s) 505
BtsCI GGATG 2 cut(s) 43, 342
BtsI GCAGTG 1 cut(s) 516
BtsIMutI CAGTG 1 cut(s) 516
Cac8I GCNNGC 2 cut(s) 402, 552
CciI TCATGA 1 cut(s) 391
CviAII CATG 4 cut(s) 43, 205, 392, 506
DdeI CTNAG 2 cut(s) 306, 426
DpnI GATC 2 cut(s) 168, 234
DpnII GATC 2 cut(s) 166, 232
Eco130I CCWWGG 2 cut(s) 365, 505
Eco147I AGGCCT 1 cut(s) 550
Eco57I CTGAAG 1 cut(s) 75
EcoT14I CCWWGG 2 cut(s) 365, 505
ErhI CCWWGG 2 cut(s) 365, 505
FaeI CATG 4 cut(s) 46, 208, 395, 509
FatI CATG 4 cut(s) 42, 204, 391, 505
FauI CCCGC 1 cut(s) 378
FblI GTMKAC 2 cut(s) 372, 511
Fnu4HI GCNGC 3 cut(s) 156, 351, 555
FokI GGATG 2 cut(s) 50, 349
Fsp4HI GCNGC 3 cut(s) 156, 351, 555
FspBI CTAG 1 cut(s) 534
GluI GCNGC 3 cut(s) 156, 351, 555
GsaI CCCAGC 1 cut(s) 299
HaeIII GGCC 1 cut(s) 550
Hin1II CATG 4 cut(s) 46, 208, 395, 509
HinfI GANTC 1 cut(s) 118
HphI GGTGA 1 cut(s) 242
Hpy166II GTNNAC 2 cut(s) 373, 512
Hpy188I TCNGA 4 cut(s) 123, 151, 186, 218
Hpy188III TCNNGA 2 cut(s) 75, 392
Hpy8I GTNNAC 2 cut(s) 373, 512
HpyAV CCTTC 2 cut(s) 99, 540
HpyCH4V TGCA 6 cut(s) 50, 155, 178, 212, 400, 554
HpyF10VI GCNNNNNNNGC 2 cut(s) 47, 416
HpyF3I CTNAG 2 cut(s) 306, 426
Hsp92II CATG 4 cut(s) 46, 208, 395, 509
Kzo9I GATC 2 cut(s) 166, 232
LmnI GCTCC 2 cut(s) 382, 416
LpnPI CCDG 8 cut(s) 60, 81, 249, 293, 309, 364, 386, 454
Lsp1109I GCAGC 1 cut(s) 167
LweI GCATC 3 cut(s) 28, 142, 187
MaeI CTAG 1 cut(s) 534
MaeIII GTNAC 3 cut(s) 31, 301, 527
MalI GATC 2 cut(s) 168, 234
MbiI CCGCTC 1 cut(s) 385
MboI GATC 2 cut(s) 166, 232
MboII GAAGA 1 cut(s) 121
MfeI CAATTG 1 cut(s) 251
MflI RGATCY 1 cut(s) 166
MluCI AATT 5 cut(s) 16, 145, 251, 319, 395
MnlI CCTC 4 cut(s) 6, 96, 263, 406
MroXI GAANNNNTTC 1 cut(s) 128
MspA1I CMGCKG 3 cut(s) 95, 299, 557
MunI CAATTG 1 cut(s) 251
Mva1269I GAATGC 1 cut(s) 84
MwoI GCNNNNNNNGC 2 cut(s) 47, 416
NcoI CCATGG 1 cut(s) 505
NdeII GATC 2 cut(s) 166, 232
NlaIII CATG 4 cut(s) 46, 208, 395, 509
NlaIV GGNNCC 2 cut(s) 342, 418
NmeAIII GCCGAG 1 cut(s) 436
NmuCI GTSAC 1 cut(s) 527
NspI RCATGY 1 cut(s) 208
PagI TCATGA 1 cut(s) 391
PceI AGGCCT 1 cut(s) 550
PciI ACATGT 1 cut(s) 204
PctI GAATGC 1 cut(s) 84
PdmI GAANNNNTTC 1 cut(s) 128
PfeI GAWTC 1 cut(s) 118
PkrI GCNGC 3 cut(s) 157, 352, 556
PscI ACATGT 1 cut(s) 204
PspFI CCCAGC 1 cut(s) 295
PspN4I GGNNCC 2 cut(s) 342, 418
PstI CTGCAG 1 cut(s) 556
PsuI RGATCY 1 cut(s) 166
PvuII CAGCTG 3 cut(s) 95, 299, 557
SatI GCNGC 3 cut(s) 156, 351, 555
Sau3AI GATC 2 cut(s) 166, 232
SetI ASST 9 cut(s) 88, 97, 140, 274, 301, 312, 346, 432, 559
SfaNI GCATC 3 cut(s) 28, 142, 187
SfcI CTRYAG 1 cut(s) 552
Sse9I AATT 5 cut(s) 16, 145, 251, 319, 395
SseBI AGGCCT 1 cut(s) 550
SsiI CCGC 2 cut(s) 351, 385
SspMI CTAG 1 cut(s) 534
StuI AGGCCT 1 cut(s) 550
StyI CCWWGG 2 cut(s) 365, 505
TasI AATT 5 cut(s) 16, 145, 251, 319, 395
TauI GCSGC 1 cut(s) 353
TfiI GAWTC 1 cut(s) 118
TscAI CASTG 1 cut(s) 523
TseFI GTSAC 1 cut(s) 527
TseI GCWGC 2 cut(s) 155, 554
Tsp45I GTSAC 1 cut(s) 527
TspDTI ATGAA 4 cut(s) 236, 316, 408, 507
TspGWI ACGGA 2 cut(s) 50, 177
TspRI CASTG 1 cut(s) 523
XapI RAATTY 1 cut(s) 145
XceI RCATGY 1 cut(s) 208
XmiI GTMKAC 2 cut(s) 372, 511
XmnI GAANNNNTTC 1 cut(s) 128
XspI CTAG 1 cut(s) 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.