Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001659

Physical Location & Seq

Genomic Coordinates Forward (+)

3710433 .. 3714033

Gene Structure 3601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g07040.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGTACTTTGCTCAGAAGTATAAAGGTGAGGTTGTTTTGCGGTTTGATGATACAAATCCTGCTAAAGAGAGCAATGAGTTTGTGGATAATCTTATCAAGGATGTTGAGACTTTGGGTGTCAAGTATGAGAGGATCACCTATACTTCTGATTATTTCCCTGAGTTGATGAAAATGGCGGAGGAACTGATAAACAAAGGTAAAGCATATGTTGATGATACACCTAGAGAGCAGATGCAAAAAGAGAGAATGGAGGGGATTGAGTCTAAGTGTAGAAACCACAGCGAAGAGGAAAATTTGAAATTGTGGGAGCAGATGGTTGCAGGTTCAGAGAGGGGTCTGCAGTGTTGTGTTAGAGGAAAGCTTGATATGCAAAATCCTAATAAATCACTCAGAGATCCTGTTTATTATCGTTGCAACCCAATGCCGCATCATAGGATTGGGTCCAAGTACAAGGTCTACCCAACTTATGATTTCGCTTGTCCATTTGTTGATTCCATTGAAGGTATAACTCATGCACTTCGATCTAGTGAGTATCATGATCGCAACGCCCAGTATGATTGGATTCAAGGTGATATGGCGGAACTGAGAAGACTCAGAGGAGTGCATATATATGAGTTCAGTAGGTTGAACATGGTCTATACACTTCTCAGCAAGCGCAAGCTTTTATGGTTTGTTCAAAATGAGAAGGTCAATGGATGGGATGATCCTCGATTTCCCACAGTTCAAGGAATTGTGCGTAGAGGTCTCAAAATTGAAGCATTGATACAATTCATTCTTGAGATGGGGGCTTCGAAGAATCTGAATCTTATGGAATGGGACAAACTGTGGACAATTAACAAGAAGATTATTGATCCTGTATGCCCAAGACACACTGCTGTCGTTGAAGAGAGACGAGTGTTGTTGACCCTCTCTAATGGCCCTGAGAAGCCATTTGTCCGCATGATACCTAGGCATAAGAAGTATGAAGGTGCTGGAGAGAAGGCAACAACATTCACAAGGAGCATATGGATAGATCATGCTGATGCAGAGTTGATATCAGTTGACGAGGAAGTCACATTGATGGATTGGGGGAATGCCATTGTTAAGAAGATTGAGAAGGACCAAGATGGAAATCTTGCGCTCACAGGGGTTTTGCATCTTGAAGGATCTGTGAAAACCACCAAATTGAAGCTTACCTGGCTGCCTCAAATAGATGAACTGGTTAAGCTCTCGTTGATGGAGTTTGATTATCTGATAACAAAGAAGAAGCTCGAGGAAGGCGAGGATTTCATTGGTGTGGTTAATCCATGTACCGAAAAGGAGACAGCTGCCCTTGGGGATGCCAACATGCGAAATCTTAAACGTGGAGATGTGTTGCAACTTGAGAGGAAAGGATACTTCAGATGTGATGTTCCGTACCTCAGGCCTTCAAAACCTATTGTTCTCTTTGCAATCCCCGACGGCAGGCAGCAGGCTGGGTTAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003824 GO:0004812 GO:0004818 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006424 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko00970 ko01100 ko01110 ko01120 map00860 map00970 map01100 map01110 map01120

Pfam Domains

Protein Families

GST_C GST_C_3 tRNA-synt_1c tRNA-synt_1c_C

Protein Analysis

489

Amino Acids

56.67

Weight (kDa)

7.14

Isoelectric Point (pI)

36.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1c	PF00749	2 - 284	6.1e-87	tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_1c_C	PF03950	287 - 372	1.9e-16	tRNA synthetases class I (E and Q), anti-codon binding domain
tRNA-synt_1c_C2	PF20974	390 - 463	2.6e-13	tRNA synthetases class I (E and Q), anti-codon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26710
fragaria_vesca	FvH4_1g07040 FvH4_3g18420 FvH4_5g29940 FvH4_5g29940 FvH4_6g08750
malus_domestica	MD04G1184100.v1.1 MD12G1197300.v1.1
prunus_persica	Prupe.6G302600_v2.0.a1 Prupe.6G302600_v2.0.a1
pyrus_communis	pycom04g16310
rosa_chinensis	RchiOBHm_Chr1g0323481 RchiOBHm_Chr1g0323531 RchiOBHm_Chr1g0330311 RchiOBHm_Chr1g0330321 RchiOBHm_Chr1g0330421 RchiOBHm_Chr1g0330431 RchiOBHm_Chr3g0459011
rosa_laevigata	RLG00000025126 RLG00000029811 RLG00000030323 RLG00000030332
rosa_multiflora	Rmu_co8493977.1_g000001 Rmu_sc0002634.1_g000044 Rmu_sc0004343.1_g000022 Rmu_sc0007290.1_g000009 Rmu_sc0007290.1_g000010
rosa_roxburghii	Rroxscaffold_4G00319950 Rroxscaffold_4G00319960 Rroxscaffold_6G00420600
rosa_rugosa	Rorug01G0088900 Rorug03G0032500 Rorug05G0414800
rosa_samantha	Rh1AG106700 Rh1AG106800 Rh1CG056600 Rh1CG057900 Rh1CG102700 Rh1CG102800 Rh1DG060600 Rh1DG061700 Rh1DG110600 Rh3BG093600 Rh5DG502200 Rh6BG457000 Rh6BG457100
rosa_wichuraiana	Rw1G008430 Rw1G008550 Rw3G007770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1049
Acc36I	ACCTGC	1 cut(s)	311
AccI	GTMKAC	1 cut(s)	456
AciI	CCGC	5 cut(s)	40, 176, 425, 578, 937
AclWI	GGATC	5 cut(s)	140, 389, 698, 845, 1153
AcsI	RAATTY	1 cut(s)	292
AcuI	CTGAAG	1 cut(s)	1363
AfaI	GTAC	4 cut(s)	5, 449, 1291, 1397
AfiI	CCNNNNNNNGG	1 cut(s)	1443
AjnI	CCWGG	1 cut(s)	1175
AluBI	AGCT	6 cut(s)	361, 661, 1171, 1207, 1249, 1307
AluI	AGCT	6 cut(s)	361, 661, 1171, 1207, 1249, 1307
Alw26I	GTCTC	4 cut(s)	101, 749, 883, 1295
AlwI	GGATC	5 cut(s)	140, 389, 698, 845, 1153
Ama87I	CYCGRG	1 cut(s)	1250
AoxI	GGCC	2 cut(s)	916, 1403
ApeKI	GCWGC	3 cut(s)	1180, 1307, 1447
ApoI	RAATTY	1 cut(s)	292
AspA2I	CCTAGG	1 cut(s)	947
AspLEI	GCGC	2 cut(s)	657, 1120
AspS9I	GGNCC	3 cut(s)	441, 917, 1099
AsuHPI	GGTGA	3 cut(s)	38, 127, 581
AsuII	TTCGAA	1 cut(s)	791
AvaI	CYCGRG	1 cut(s)	1250
AvaII	GGWCC	2 cut(s)	441, 1099
AvrII	CCTAGG	1 cut(s)	947
AxyI	CCTNAGG	1 cut(s)	1400
BarI	GAAGNNNNNNTAC	2 cut(s)	747, 779
BbsI	GAAGAC	1 cut(s)	595
BbvI	GCAGC	3 cut(s)	1167, 1294, 1459
BccI	CCATC	6 cut(s)	307, 690, 775, 1054, 1100, 1210
BceAI	ACGGC	1 cut(s)	1456
BciT130I	CCWGG	1 cut(s)	1177
BciVI	GTATCC	1 cut(s)	1367
BcoDI	GTCTC	4 cut(s)	101, 749, 883, 1295
BfaI	CTAG	3 cut(s)	222, 525, 948
BfmI	CTRYAG	1 cut(s)	338
BfuAI	ACCTGC	1 cut(s)	311
BfuI	GTATCC	1 cut(s)	1367
BisI	GCNGC	4 cut(s)	425, 1181, 1308, 1448
BlnI	CCTAGG	1 cut(s)	947
BlsI	GCNGC	4 cut(s)	426, 1182, 1309, 1449
Bme1390I	CCNGG	1 cut(s)	1177
Bme18I	GGWCC	2 cut(s)	441, 1099
BmeT110I	CYCGRG	1 cut(s)	1250
BmgT120I	GGNCC	3 cut(s)	441, 917, 1099
BmiI	GGNNCC	1 cut(s)	442
BmrFI	CCNGG	1 cut(s)	1177
BmrI	ACTGGG	1 cut(s)	544
BmsI	GCATC	5 cut(s)	222, 436, 1012, 1144, 1309
BmuI	ACTGGG	1 cut(s)	544
BpiI	GAAGAC	1 cut(s)	595
BpmI	CTGGAG	1 cut(s)	993
Bpu14I	TTCGAA	1 cut(s)	791
BpuEI	CTTGAG	2 cut(s)	797, 1382
BsaBI	GATNNNNATC	2 cut(s)	54, 1110
BsaI	GGTCTC	1 cut(s)	749
BsaJI	CCNNGG	2 cut(s)	947, 1312
Bsc4I	CCNNNNNNNGG	1 cut(s)	1443
Bse1I	ACTGG	2 cut(s)	550, 1203
Bse21I	CCTNAGG	1 cut(s)	1400
Bse3DI	GCAATG	1 cut(s)	79
Bse8I	GATNNNNATC	2 cut(s)	54, 1110
BseBI	CCWGG	1 cut(s)	1177
BseDI	CCNNGG	2 cut(s)	947, 1312
BseGI	GGATG	4 cut(s)	106, 701, 706, 1324
BseJI	GATNNNNATC	2 cut(s)	54, 1110
BseLI	CCNNNNNNNGG	1 cut(s)	1443
BseMI	GCAATG	1 cut(s)	79
BseMII	CTCAG	8 cut(s)	26, 150, 403, 575, 607, 661, 912, 1414
BseNI	ACTGG	2 cut(s)	550, 1203
BseRI	GAGGAG	1 cut(s)	612
BseXI	GCAGC	3 cut(s)	1167, 1294, 1459
BseYI	CCCAGC	1 cut(s)	1454
BshFI	GGCC	2 cut(s)	918, 1405
BsiHKCI	CYCGRG	1 cut(s)	1250
BslFI	GGGAC	1 cut(s)	830
BslI	CCNNNNNNNGG	1 cut(s)	1443
BsmAI	GTCTC	4 cut(s)	101, 749, 883, 1295
BsmBI	CGTCTC	1 cut(s)	883
BsmFI	GGGAC	1 cut(s)	830
BsmI	GAATGC	1 cut(s)	1078
BsnI	GGCC	2 cut(s)	918, 1405
Bso31I	GGTCTC	1 cut(s)	749
BsoBI	CYCGRG	1 cut(s)	1250
Bsp119I	TTCGAA	1 cut(s)	791
Bsp143I	GATC	8 cut(s)	132, 394, 521, 538, 703, 850, 1012, 1145
BspACI	CCGC	5 cut(s)	40, 176, 425, 578, 937
BspANI	GGCC	2 cut(s)	918, 1405
BspCNI	CTCAG	8 cut(s)	25, 151, 402, 576, 606, 660, 913, 1413
BspHI	TCATGA	1 cut(s)	535
BspLI	GGNNCC	1 cut(s)	442
BspMAI	CTGCAG	1 cut(s)	342
BspMI	ACCTGC	1 cut(s)	311
BspPI	GGATC	5 cut(s)	140, 389, 698, 845, 1153
BspT104I	TTCGAA	1 cut(s)	791
BspTNI	GGTCTC	1 cut(s)	749
BsrDI	GCAATG	1 cut(s)	79
BsrI	ACTGG	2 cut(s)	550, 1203
BssECI	CCNNGG	2 cut(s)	947, 1312
BssMI	GATC	8 cut(s)	132, 394, 521, 538, 703, 850, 1012, 1145
BssT1I	CCWWGG	2 cut(s)	947, 1312
Bst2UI	CCWGG	1 cut(s)	1177
Bst4CI	ACNGT	2 cut(s)	721, 825
Bst6I	CTCTTC	2 cut(s)	279, 879
BstBI	TTCGAA	1 cut(s)	791
BstC8I	GCNNGC	4 cut(s)	653, 659, 1445, 1452
BstDEI	CTNAG	9 cut(s)	12, 159, 264, 389, 584, 593, 647, 921, 1400
BstF5I	GGATG	4 cut(s)	106, 701, 706, 1324
BstHHI	GCGC	2 cut(s)	657, 1120
BstKTI	GATC	8 cut(s)	135, 397, 524, 541, 706, 853, 1015, 1148
BstMAI	GTCTC	4 cut(s)	101, 749, 883, 1295
BstMBI	GATC	8 cut(s)	132, 394, 521, 538, 703, 850, 1012, 1145
BstMWI	GCNNNNNNNGC	2 cut(s)	367, 1177
BstNI	CCWGG	1 cut(s)	1177
BstNSI	RCATGY	1 cut(s)	1330
BstSCI	CCNGG	1 cut(s)	1175
BstSFI	CTRYAG	1 cut(s)	338
BstV1I	GCAGC	3 cut(s)	1167, 1294, 1459
BstV2I	GAAGAC	1 cut(s)	595
BstX2I	RGATCY	2 cut(s)	394, 1145
BstYI	RGATCY	2 cut(s)	394, 1145
Bsu36I	CCTNAGG	1 cut(s)	1400
BsuI	GTATCC	1 cut(s)	1367
BsuRI	GGCC	2 cut(s)	918, 1405
BtsCI	GGATG	4 cut(s)	106, 701, 706, 1324
BtsI	GCAGTG	2 cut(s)	347, 870
BtsIMutI	CAGTG	2 cut(s)	347, 870
BveI	ACCTGC	1 cut(s)	311
Cac8I	GCNNGC	4 cut(s)	653, 659, 1445, 1452
CciI	TCATGA	1 cut(s)	535
CfoI	GCGC	2 cut(s)	657, 1120
Cfr13I	GGNCC	3 cut(s)	441, 917, 1099
Csp6I	GTAC	4 cut(s)	4, 448, 1290, 1396
CviAII	CATG	7 cut(s)	512, 536, 631, 940, 1016, 1287, 1327
CviQI	GTAC	4 cut(s)	4, 448, 1290, 1396
DdeI	CTNAG	9 cut(s)	12, 159, 264, 389, 584, 593, 647, 921, 1400
DpnI	GATC	8 cut(s)	134, 396, 523, 540, 705, 852, 1014, 1147
DpnII	GATC	8 cut(s)	132, 394, 521, 538, 703, 850, 1012, 1145
DrdI	GACNNNNNNGTC	1 cut(s)	1049
DseDI	GACNNNNNNGTC	1 cut(s)	1049
Eam1104I	CTCTTC	2 cut(s)	279, 879
EarI	CTCTTC	2 cut(s)	279, 879
EciI	GGCGGA	2 cut(s)	191, 593
Eco130I	CCWWGG	2 cut(s)	947, 1312
Eco147I	AGGCCT	1 cut(s)	1405
Eco31I	GGTCTC	1 cut(s)	749
Eco32I	GATATC	1 cut(s)	1035
Eco47I	GGWCC	2 cut(s)	441, 1099
Eco57I	CTGAAG	1 cut(s)	1363
Eco81I	CCTNAGG	1 cut(s)	1400
Eco88I	CYCGRG	1 cut(s)	1250
EcoRII	CCWGG	1 cut(s)	1175
EcoRV	GATATC	1 cut(s)	1035
EcoT14I	CCWWGG	2 cut(s)	947, 1312
ErhI	CCWWGG	2 cut(s)	947, 1312
Esp3I	CGTCTC	1 cut(s)	883
FaeI	CATG	7 cut(s)	515, 539, 634, 943, 1019, 1290, 1330
FaqI	GGGAC	1 cut(s)	830
FatI	CATG	7 cut(s)	511, 535, 630, 939, 1015, 1286, 1326
FauNDI	CATATG	2 cut(s)	205, 1004
FblI	GTMKAC	1 cut(s)	456
Fnu4HI	GCNGC	4 cut(s)	425, 1181, 1308, 1448
FokI	GGATG	4 cut(s)	113, 708, 713, 1331
Fsp4HI	GCNGC	4 cut(s)	425, 1181, 1308, 1448
FspBI	CTAG	3 cut(s)	222, 525, 948
GlaI	GCGC	2 cut(s)	656, 1119
GluI	GCNGC	4 cut(s)	425, 1181, 1308, 1448
GsaI	CCCAGC	1 cut(s)	1458
GsuI	CTGGAG	1 cut(s)	993
HaeIII	GGCC	2 cut(s)	918, 1405
HhaI	GCGC	2 cut(s)	657, 1120
Hin1II	CATG	7 cut(s)	515, 539, 634, 943, 1019, 1290, 1330
Hin6I	GCGC	2 cut(s)	655, 1118
HinP1I	GCGC	2 cut(s)	655, 1118
HincII	GTYRAC	2 cut(s)	903, 1042
HindII	GTYRAC	2 cut(s)	903, 1042
HindIII	AAGCTT	3 cut(s)	359, 659, 1169
HinfI	GANTC	6 cut(s)	260, 491, 562, 591, 796, 802
HphI	GGTGA	3 cut(s)	38, 127, 581
Hpy166II	GTNNAC	4 cut(s)	457, 828, 903, 1042
Hpy188I	TCNGA	8 cut(s)	15, 148, 328, 392, 596, 801, 1233, 1382
Hpy188III	TCNNGA	3 cut(s)	536, 776, 1139
Hpy8I	GTNNAC	4 cut(s)	457, 828, 903, 1042
Hpy99I	CGWCG	1 cut(s)	1442
HpyAV	CCTTC	8 cut(s)	494, 679, 959, 973, 1090, 1136, 1250, 1416
HpyCH4III	ACNGT	2 cut(s)	721, 825
HpyCH4IV	ACGT	1 cut(s)	1342
HpyF10VI	GCNNNNNNNGC	2 cut(s)	367, 1177
HpyF3I	CTNAG	9 cut(s)	12, 159, 264, 389, 584, 593, 647, 921, 1400
HpySE526I	ACGT	1 cut(s)	1342
Hsp92II	CATG	7 cut(s)	515, 539, 634, 943, 1019, 1290, 1330
HspAI	GCGC	2 cut(s)	655, 1118
Kzo9I	GATC	8 cut(s)	132, 394, 521, 538, 703, 850, 1012, 1145
LmnI	GCTCC	2 cut(s)	307, 999
Lsp1109I	GCAGC	3 cut(s)	1167, 1294, 1459
LweI	GCATC	5 cut(s)	222, 436, 1012, 1144, 1309
MaeI	CTAG	3 cut(s)	222, 525, 948
MaeII	ACGT	1 cut(s)	1342
MaeIII	GTNAC	1 cut(s)	1051
MalI	GATC	8 cut(s)	134, 396, 523, 540, 705, 852, 1014, 1147
MboI	GATC	8 cut(s)	132, 394, 521, 538, 703, 850, 1012, 1145
MboII	GAAGA	7 cut(s)	296, 600, 805, 853, 896, 1099, 1255
MflI	RGATCY	2 cut(s)	394, 1145
MluCI	AATT	7 cut(s)	292, 299, 729, 750, 767, 831, 1163
MlyI	GAGTC	2 cut(s)	269, 585
MseI	TTAA	6 cut(s)	834, 1083, 1203, 1281, 1338, 1460
MslI	CAYNNNNRTG	4 cut(s)	609, 1020, 1058, 1274
MspA1I	CMGCKG	1 cut(s)	1307
MspR9I	CCNGG	1 cut(s)	1177
Mva1269I	GAATGC	1 cut(s)	1078
MvaI	CCWGG	1 cut(s)	1177
MwoI	GCNNNNNNNGC	2 cut(s)	367, 1177
NdeI	CATATG	2 cut(s)	205, 1004
NdeII	GATC	8 cut(s)	132, 394, 521, 538, 703, 850, 1012, 1145
NlaIII	CATG	7 cut(s)	515, 539, 634, 943, 1019, 1290, 1330
NlaIV	GGNNCC	1 cut(s)	442
NmuCI	GTSAC	1 cut(s)	1051
NspI	RCATGY	1 cut(s)	1330
NspV	TTCGAA	1 cut(s)	791
PaeR7I	CTCGAG	1 cut(s)	1250
PagI	TCATGA	1 cut(s)	535
PceI	AGGCCT	1 cut(s)	1405
PcsI	WCGNNNNNNNCGW	1 cut(s)	1257
PctI	GAATGC	1 cut(s)	1078
PfeI	GAWTC	4 cut(s)	491, 562, 796, 802
PkrI	GCNGC	4 cut(s)	426, 1182, 1309, 1449
PleI	GAGTC	2 cut(s)	268, 585
PpsI	GAGTC	2 cut(s)	268, 585
Psp6I	CCWGG	1 cut(s)	1175
PspFI	CCCAGC	1 cut(s)	1454
PspGI	CCWGG	1 cut(s)	1175
PspN4I	GGNNCC	1 cut(s)	442
PspPI	GGNCC	3 cut(s)	441, 917, 1099
PspXI	VCTCGAGB	1 cut(s)	1250
PstI	CTGCAG	1 cut(s)	342
PsuI	RGATCY	2 cut(s)	394, 1145
PvuII	CAGCTG	1 cut(s)	1307
RsaI	GTAC	4 cut(s)	5, 449, 1291, 1397
RsaNI	GTAC	4 cut(s)	4, 448, 1290, 1396
RseI	CAYNNNNRTG	4 cut(s)	609, 1020, 1058, 1274
SaqAI	TTAA	6 cut(s)	834, 1083, 1203, 1281, 1338, 1460
SatI	GCNGC	4 cut(s)	425, 1181, 1308, 1448
Sau3AI	GATC	8 cut(s)	132, 394, 521, 538, 703, 850, 1012, 1145
Sau96I	GGNCC	3 cut(s)	441, 917, 1099
SchI	GAGTC	2 cut(s)	269, 585
ScrFI	CCNGG	1 cut(s)	1177
SfaNI	GCATC	5 cut(s)	222, 436, 1012, 1144, 1309
SfcI	CTRYAG	1 cut(s)	338
Sfr274I	CTCGAG	1 cut(s)	1250
SfuI	TTCGAA	1 cut(s)	791
SinI	GGWCC	2 cut(s)	441, 1099
SlaI	CTCGAG	1 cut(s)	1250
SmiMI	CAYNNNNRTG	4 cut(s)	609, 1020, 1058, 1274
SmlI	CTYRAG	3 cut(s)	776, 1250, 1361
SmoI	CTYRAG	3 cut(s)	776, 1250, 1361
Sse9I	AATT	7 cut(s)	292, 299, 729, 750, 767, 831, 1163
SseBI	AGGCCT	1 cut(s)	1405
SsiI	CCGC	5 cut(s)	40, 176, 425, 578, 937
SspMI	CTAG	3 cut(s)	222, 525, 948
StuI	AGGCCT	1 cut(s)	1405
StyD4I	CCNGG	1 cut(s)	1175
StyI	CCWWGG	2 cut(s)	947, 1312
TaaI	ACNGT	2 cut(s)	721, 825
TaiI	ACGT	1 cut(s)	1345
TaqI	TCGA	4 cut(s)	520, 709, 791, 1251
TasI	AATT	7 cut(s)	292, 299, 729, 750, 767, 831, 1163
TatI	WGTACW	2 cut(s)	3, 447
TauI	GCSGC	1 cut(s)	427
TfiI	GAWTC	4 cut(s)	491, 562, 796, 802
Tru1I	TTAA	6 cut(s)	834, 1083, 1203, 1281, 1338, 1460
Tru9I	TTAA	6 cut(s)	834, 1083, 1203, 1281, 1338, 1460
TscAI	CASTG	2 cut(s)	347, 877
TseFI	GTSAC	1 cut(s)	1051
TseI	GCWGC	3 cut(s)	1180, 1307, 1447
Tsp45I	GTSAC	1 cut(s)	1051
TspDTI	ATGAA	5 cut(s)	182, 760, 978, 1209, 1258
TspGWI	ACGGA	1 cut(s)	1383
TspRI	CASTG	2 cut(s)	347, 877
VpaK11BI	GGWCC	2 cut(s)	441, 1099
XapI	RAATTY	1 cut(s)	292
XceI	RCATGY	1 cut(s)	1330
XhoI	CTCGAG	1 cut(s)	1250
XmaJI	CCTAGG	1 cut(s)	947
XmiI	GTMKAC	1 cut(s)	456
XspI	CTAG	3 cut(s)	222, 525, 948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.