Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001659

Physical Location & Seq

Genomic Coordinates Reverse (-)

18234926 .. 18248388

Gene Structure 13463 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G008430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGTTAGGCTTCATGAGATGAAGAGGAGCAGCCTGGCCCCGACACCATTGGCGGTGGTCGGCGGCGGCTCGGCCCCTACTCCGGCGGCCCTTTCCGGCCACCTCCGGGGGTCAAAAAAAAAAAAATTCAGGACGTTATTTGTAATTGTTATCATTCATGTTTCGGACTTTGAATTGATTATTCAAAATTCGGGATTTCTTATTGTTGCTCTTGTTGAAAATTGCCCTCGATATACATCAGAACTTGAAATCAAGGACATCATTCATTTCATCGATGCCTATCCCCGTCACATAGGGCTCGCGTCTATGGAGGACAAGGTCCATGCAGAAGTGTCTTCGTGGCGTGCCGGGAAAAAATGCTCAGCGAAATTGAAAGAGAACCCAGCCAGTCAGCAGTCCAAGGCTAAAGCAGGAACCACCCGAGGAACATTCGAGGTAGATCTACCGGAGGCTGAGGCTGGAAAGGTGAAGTTGAGGTTTGCGCCGGAACCAAGTGGTTATCTTCATATTGGGCACTCGAAAGCAGCTTTACTGAATCAGTATTTTGCTCAGCGGTATCAAGGATACAATGAGTTTGTCGATAATCTTCTCAAAGATATTCTGACTTTGGGTATCAAGTATGAGGAGGTTACCTATACTTCAGATCACTTGGATGAGTTGATGGATATGACCGAGAAGCTGATTAACCAAGGTAAAGCATATCAACGGATGGATGGGATTGAGTCAAAGTGTAGAAACCACAGCAAAGACGAAAATTTGAAACTGTGGGAGGAGATGAAAGCAGGTTCAGAGAGGGATCTGCATTGTTGTGTTAGAGGGAAGCTGGACATGCAGGACCCTAATAAATCACTCAGAGATCCAGTTTATTATCGTTGCAATCCAATGCCACATCATAGGAAAGAGATAGGGTCCAATTACAAGGTCTACCCAACTTATGATTTTGCTTGTCCATTTGTTGATTCCATTGAAGGTATAACTCATGCCCTTCGATCTAGTGAATACCATGATCGCAACGCCCAGTACTATAGGATTCCAGAGGATATGGGACTGAGAAAGGTCCATGTGTATGAGTTCAGTAGATTGAACATGGTCTATACACTCCTCAGCGAGCGGAAGCTTTTGTGGTTTGTTCAAAATGACAAGGTCAATGGATGGGATGATCCTCGATTCCCAACTGTTCAAGGAATCGTGCGTAGAGGTCTCAAAGTTGAAGCATTGATACAGTTCATTCTTGAGCAGGGGGCTTCAAAGAATCTGAATCTTATGGAATGGGATAAACTGTATGAATACAATACAATTATCCAATTCTCTACAACATGGACTCTTAATAAGAAGATTATTGATCCTGTATGCCCAAGACATACTGCAAAGCCATTTGTCCGCATAATACCTAGGCATAAGAAGTATGAAGGTGCTGGAGAGAAGGCAACATCATTCACAAGGATAGATGAGGAAGTGACATTGATGGATTGGGGGAATGCCATTGTTAAGAAGATTGACAAAGACCAAGATGGAAATCTTGCGCTCACAGGGGTTTTGCATCTTGAAGGATCTGTGAAAACCACCAAACTGAAGCTTACCTGGCTGCCTGAAATAGATGAACTGGTTAAGATCTCGTTGATGGAGTTTGATTATCTGATAACAAAGAAGAAGCTTGAGGAAGGCGAGGATTTCGTTGATGTGCTCAACCGATGTACCGAAAAGGAGACAGCAGCCCTTGGGGATCCCAACATGCGAAATCTGAAGTGTGGAGATGTAGTGCAACTTGAGAGGAAAGGATACTTCAGATGTGATGTTCCCTACCTCAAGCCTTCAAAGCCTATTGTTCTCTTTGCAATCCCCGACGGCAGGCAGCAGGCTGGGTTAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003824 GO:0004812 GO:0004818 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006424 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko00970 ko01100 ko01110 ko01120 map00860 map00970 map01100 map01110 map01120

Pfam Domains

Protein Families

GST_C GST_C_3 tRNA-synt_1c tRNA-synt_1c_C

Protein Analysis

623

Amino Acids

71.3

Weight (kDa)

8.59

Isoelectric Point (pI)

26.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1c	PF00749	155 - 428	3.2e-72	tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_1c_C2	PF20974	525 - 598	2.9e-14	tRNA synthetases class I (E and Q), anti-codon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26710
fragaria_vesca	FvH4_1g07040 FvH4_3g18420 FvH4_5g29940 FvH4_5g29940 FvH4_6g08750
malus_domestica	MD04G1184100.v1.1 MD12G1197300.v1.1
prunus_persica	Prupe.6G302600_v2.0.a1 Prupe.6G302600_v2.0.a1
pyrus_communis	pycom04g16310
rosa_chinensis	RchiOBHm_Chr1g0323481 RchiOBHm_Chr1g0323531 RchiOBHm_Chr1g0330311 RchiOBHm_Chr1g0330321 RchiOBHm_Chr1g0330421 RchiOBHm_Chr1g0330431 RchiOBHm_Chr3g0459011
rosa_laevigata	RLG00000025126 RLG00000029811 RLG00000030323 RLG00000030332
rosa_multiflora	Rmu_co8493977.1_g000001 Rmu_sc0002634.1_g000044 Rmu_sc0004343.1_g000022 Rmu_sc0007290.1_g000009 Rmu_sc0007290.1_g000010
rosa_roxburghii	Rroxscaffold_4G00319950 Rroxscaffold_4G00319960 Rroxscaffold_6G00420600
rosa_rugosa	Rorug01G0088900 Rorug03G0032500 Rorug05G0414800
rosa_samantha	Rh1AG106700 Rh1AG106800 Rh1CG056600 Rh1CG057900 Rh1CG102700 Rh1CG102800 Rh1DG060600 Rh1DG061700 Rh1DG110600 Rh3BG093600 Rh5DG502200 Rh6BG457000 Rh6BG457100
rosa_wichuraiana	Rw1G008430 Rw1G008550 Rw3G007770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	773
AccBSI	CCGCTC	1 cut(s)	1111
AccI	GTMKAC	1 cut(s)	924
AccII	CGCG	1 cut(s)	302
AciI	CCGC	7 cut(s)	53, 63, 66, 86, 553, 1111, 1381
AclWI	GGATC	7 cut(s)	804, 851, 1154, 1337, 1558, 1718, 1731
AcoI	YGGCCR	1 cut(s)	97
AcsI	RAATTY	3 cut(s)	125, 187, 754
AcuI	CTGAAG	4 cut(s)	624, 1592, 1763, 1768
AfaI	GTAC	2 cut(s)	1022, 1696
AfiI	CCNNNNNNNGG	3 cut(s)	82, 106, 1848
AjnI	CCWGG	2 cut(s)	33, 1580
AluBI	AGCT	6 cut(s)	527, 679, 823, 1117, 1576, 1654
AluI	AGCT	6 cut(s)	527, 679, 823, 1117, 1576, 1654
Alw21I	GWGCWC	1 cut(s)	1686
Alw26I	GTCTC	2 cut(s)	1205, 1700
AlwI	GGATC	7 cut(s)	804, 851, 1154, 1337, 1558, 1718, 1731
Ama87I	CYCGRG	1 cut(s)	420
AoxI	GGCC	4 cut(s)	36, 72, 87, 97
ApeKI	GCWGC	5 cut(s)	30, 524, 1585, 1712, 1852
ApoI	RAATTY	3 cut(s)	125, 187, 754
AspA2I	CCTAGG	1 cut(s)	1391
AspLEI	GCGC	2 cut(s)	484, 1525
AspS9I	GGNCC	7 cut(s)	37, 73, 88, 319, 835, 909, 1057
AsuC2I	CCSGG	2 cut(s)	107, 349
AsuHPI	GGTGA	1 cut(s)	478
AvaI	CYCGRG	1 cut(s)	420
AvaII	GGWCC	4 cut(s)	319, 835, 909, 1057
AvrII	CCTAGG	1 cut(s)	1391
BaeGI	GKGCMC	1 cut(s)	516
BaeI	ACNNNNGTAYC	2 cut(s)	1678, 1711
BamHI	GGATCC	1 cut(s)	1723
BanII	GRGCYC	1 cut(s)	300
BarI	GAAGNNNNNNTAC	2 cut(s)	1203, 1235
BbsI	GAAGAC	1 cut(s)	327
Bbv12I	GWGCWC	1 cut(s)	1686
BbvCI	CCTCAGC	2 cut(s)	453, 1103
BbvI	GCAGC	5 cut(s)	42, 536, 1572, 1724, 1864
BccI	CCATC	7 cut(s)	655, 703, 707, 1146, 1459, 1505, 1615
BceAI	ACGGC	1 cut(s)	1861
BciT130I	CCWGG	2 cut(s)	35, 1582
BciVI	GTATCC	2 cut(s)	557, 1772
BcnI	CCSGG	2 cut(s)	107, 349
BcoDI	GTCTC	2 cut(s)	1205, 1700
BfaI	CTAG	2 cut(s)	993, 1392
BfmI	CTRYAG	1 cut(s)	1024
BfuAI	ACCTGC	1 cut(s)	773
BfuI	GTATCC	2 cut(s)	557, 1772
BglII	AGATCT	2 cut(s)	439, 1611
BisI	GCNGC	8 cut(s)	31, 64, 67, 87, 525, 1586, 1713, 1853
BlnI	CCTAGG	1 cut(s)	1391
BlpI	GCTNAGC	2 cut(s)	361, 549
BlsI	GCNGC	8 cut(s)	32, 65, 68, 88, 526, 1587, 1714, 1854
BmcAI	AGTACT	1 cut(s)	1022
Bme1390I	CCNGG	4 cut(s)	35, 107, 349, 1582
Bme18I	GGWCC	4 cut(s)	319, 835, 909, 1057
BmeT110I	CYCGRG	1 cut(s)	420
BmgT120I	GGNCC	7 cut(s)	37, 73, 88, 319, 835, 909, 1057
BmiI	GGNNCC	7 cut(s)	39, 75, 415, 489, 837, 910, 1725
BmrFI	CCNGG	4 cut(s)	35, 107, 349, 1582
BmrI	ACTGGG	1 cut(s)	1012
BmsI	GCATC	2 cut(s)	265, 1549
BmuI	ACTGGG	1 cut(s)	1012
BpiI	GAAGAC	1 cut(s)	327
BpmI	CTGGAG	1 cut(s)	1437
Bpu10I	CCTNAGC	2 cut(s)	453, 1103
Bpu1102I	GCTNAGC	2 cut(s)	361, 549
BpuEI	CTTGAG	4 cut(s)	1253, 1676, 1787, 1790
BpuMI	CCSGG	2 cut(s)	107, 349
Bsa29I	ATCGAT	1 cut(s)	273
BsaBI	GATNNNNATC	3 cut(s)	235, 279, 1515
BsaI	GGTCTC	1 cut(s)	1205
BsaJI	CCNNGG	6 cut(s)	106, 399, 421, 688, 1391, 1717
BsaWI	WCCGGW	1 cut(s)	445
BsaXI	ACNNNNNCTCC	2 cut(s)	1743, 1773
Bsc4I	CCNNNNNNNGG	3 cut(s)	82, 106, 1848
Bse1I	ACTGG	4 cut(s)	387, 860, 1018, 1608
Bse8I	GATNNNNATC	3 cut(s)	235, 279, 1515
BseBI	CCWGG	2 cut(s)	35, 1582
BseCI	ATCGAT	1 cut(s)	273
BseDI	CCNNGG	6 cut(s)	106, 399, 421, 688, 1391, 1717
BseGI	GGATG	5 cut(s)	658, 714, 718, 1157, 1162
BseJI	GATNNNNATC	3 cut(s)	235, 279, 1515
BseLI	CCNNNNNNNGG	3 cut(s)	82, 106, 1848
BseMII	CTCAG	6 cut(s)	375, 444, 563, 865, 1040, 1117
BseNI	ACTGG	4 cut(s)	387, 860, 1018, 1608
BseRI	GAGGAG	4 cut(s)	40, 638, 785, 1091
BseSI	GKGCMC	1 cut(s)	516
BseXI	GCAGC	5 cut(s)	42, 536, 1572, 1724, 1864
BseYI	CCCAGC	2 cut(s)	382, 1859
Bsh1236I	CGCG	1 cut(s)	302
BshFI	GGCC	4 cut(s)	38, 74, 89, 99
BshVI	ATCGAT	1 cut(s)	273
BsiHKAI	GWGCWC	1 cut(s)	1686
BsiHKCI	CYCGRG	1 cut(s)	420
BsiSI	CCGG	6 cut(s)	83, 96, 106, 348, 446, 485
BslFI	GGGAC	1 cut(s)	1059
BslI	CCNNNNNNNGG	3 cut(s)	82, 106, 1848
BsmAI	GTCTC	2 cut(s)	1205, 1700
BsmFI	GGGAC	1 cut(s)	1059
BsmI	GAATGC	1 cut(s)	1483
BsnI	GGCC	4 cut(s)	38, 74, 89, 99
Bso31I	GGTCTC	1 cut(s)	1205
BsoBI	CYCGRG	1 cut(s)	420
Bsp1286I	GDGCHC	3 cut(s)	300, 516, 1686
Bsp1720I	GCTNAGC	2 cut(s)	361, 549
BspACI	CCGC	7 cut(s)	53, 63, 66, 86, 553, 1111, 1381
BspANI	GGCC	4 cut(s)	38, 74, 89, 99
BspCNI	CTCAG	6 cut(s)	374, 445, 562, 864, 1041, 1116
BspDI	ATCGAT	1 cut(s)	273
BspFNI	CGCG	1 cut(s)	302
BspHI	TCATGA	1 cut(s)	13
BspLI	GGNNCC	7 cut(s)	39, 75, 415, 489, 837, 910, 1725
BspMI	ACCTGC	1 cut(s)	773
BspPI	GGATC	7 cut(s)	804, 851, 1154, 1337, 1558, 1718, 1731
BspTNI	GGTCTC	1 cut(s)	1205
BsrBI	CCGCTC	1 cut(s)	1111
BsrI	ACTGG	4 cut(s)	387, 860, 1018, 1608
BssECI	CCNNGG	6 cut(s)	106, 399, 421, 688, 1391, 1717
BssT1I	CCWWGG	4 cut(s)	399, 688, 1391, 1717
Bst2UI	CCWGG	2 cut(s)	35, 1582
Bst4CI	ACNGT	4 cut(s)	765, 1177, 1224, 1281
Bst6I	CTCTTC	1 cut(s)	17
BstC8I	GCNNGC	5 cut(s)	300, 345, 1109, 1850, 1857
BstDEI	CTNAG	6 cut(s)	361, 453, 549, 851, 1049, 1103
BstEII	GGTNACC	1 cut(s)	628
BstF5I	GGATG	5 cut(s)	658, 714, 718, 1157, 1162
BstFNI	CGCG	1 cut(s)	302
BstHHI	GCGC	2 cut(s)	484, 1525
BstMAI	GTCTC	2 cut(s)	1205, 1700
BstMWI	GCNNNNNNNGC	3 cut(s)	829, 1582, 1816
BstNI	CCWGG	2 cut(s)	35, 1582
BstNSI	RCATGY	2 cut(s)	832, 1735
BstPI	GGTNACC	1 cut(s)	628
BstSCI	CCNGG	4 cut(s)	33, 105, 347, 1580
BstSFI	CTRYAG	1 cut(s)	1024
BstSLI	GKGCMC	1 cut(s)	516
BstUI	CGCG	1 cut(s)	302
BstV1I	GCAGC	5 cut(s)	42, 536, 1572, 1724, 1864
BstV2I	GAAGAC	1 cut(s)	327
BstX2I	RGATCY	6 cut(s)	439, 796, 856, 1550, 1611, 1723
BstYI	RGATCY	6 cut(s)	439, 796, 856, 1550, 1611, 1723
Bsu15I	ATCGAT	1 cut(s)	273
BsuI	GTATCC	2 cut(s)	557, 1772
BsuRI	GGCC	4 cut(s)	38, 74, 89, 99
BsuTUI	ATCGAT	1 cut(s)	273
BtsCI	GGATG	5 cut(s)	658, 714, 718, 1157, 1162
BveI	ACCTGC	1 cut(s)	773
Cac8I	GCNNGC	5 cut(s)	300, 345, 1109, 1850, 1857
CciI	TCATGA	1 cut(s)	13
CfoI	GCGC	2 cut(s)	484, 1525
Cfr13I	GGNCC	7 cut(s)	37, 73, 88, 319, 835, 909, 1057
ClaI	ATCGAT	1 cut(s)	273
CseI	GACGC	1 cut(s)	291
Csp6I	GTAC	2 cut(s)	1021, 1695
CviQI	GTAC	2 cut(s)	1021, 1695
DdeI	CTNAG	6 cut(s)	361, 453, 549, 851, 1049, 1103
EaeI	YGGCCR	1 cut(s)	97
Eam1104I	CTCTTC	1 cut(s)	17
EarI	CTCTTC	1 cut(s)	17
Eco130I	CCWWGG	4 cut(s)	399, 688, 1391, 1717
Eco24I	GRGCYC	1 cut(s)	300
Eco31I	GGTCTC	1 cut(s)	1205
Eco47I	GGWCC	4 cut(s)	319, 835, 909, 1057
Eco57I	CTGAAG	4 cut(s)	624, 1592, 1763, 1768
Eco88I	CYCGRG	1 cut(s)	420
Eco91I	GGTNACC	1 cut(s)	628
EcoO109I	RGGNCCY	1 cut(s)	835
EcoO65I	GGTNACC	1 cut(s)	628
EcoRII	CCWGG	2 cut(s)	33, 1580
EcoT14I	CCWWGG	4 cut(s)	399, 688, 1391, 1717
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	4 cut(s)	399, 688, 1391, 1717
FaqI	GGGAC	1 cut(s)	1059
FblI	GTMKAC	1 cut(s)	924
Fnu4HI	GCNGC	8 cut(s)	31, 64, 67, 87, 525, 1586, 1713, 1853
FokI	GGATG	5 cut(s)	665, 721, 725, 1164, 1169
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	8 cut(s)	31, 64, 67, 87, 525, 1586, 1713, 1853
FspBI	CTAG	2 cut(s)	993, 1392
GlaI	GCGC	2 cut(s)	483, 1524
GluI	GCNGC	8 cut(s)	31, 64, 67, 87, 525, 1586, 1713, 1853
GsaI	CCCAGC	2 cut(s)	386, 1863
GsuI	CTGGAG	1 cut(s)	1437
HaeIII	GGCC	4 cut(s)	38, 74, 89, 99
HapII	CCGG	6 cut(s)	83, 96, 106, 348, 446, 485
HgaI	GACGC	1 cut(s)	291
HhaI	GCGC	2 cut(s)	484, 1525
Hin6I	GCGC	2 cut(s)	482, 1523
HinP1I	GCGC	2 cut(s)	482, 1523
HindIII	AAGCTT	3 cut(s)	1115, 1574, 1652
HinfI	GANTC	9 cut(s)	535, 722, 959, 1030, 1167, 1185, 1252, 1258, 1321
HpaII	CCGG	6 cut(s)	83, 96, 106, 348, 446, 485
HphI	GGTGA	1 cut(s)	478
Hpy166II	GTNNAC	1 cut(s)	925
Hpy188III	TCNNGA	6 cut(s)	14, 130, 192, 1034, 1232, 1544
Hpy8I	GTNNAC	1 cut(s)	925
Hpy99I	CGWCG	1 cut(s)	1847
HpyAV	CCTTC	7 cut(s)	962, 995, 1403, 1417, 1541, 1655, 1821
HpyCH4III	ACNGT	4 cut(s)	765, 1177, 1224, 1281
HpyCH4IV	ACGT	1 cut(s)	134
HpyCH4V	TGCA	8 cut(s)	326, 802, 832, 876, 1367, 1540, 1762, 1835
HpyF10VI	GCNNNNNNNGC	3 cut(s)	829, 1582, 1816
HpyF3I	CTNAG	6 cut(s)	361, 453, 549, 851, 1049, 1103
HpySE526I	ACGT	1 cut(s)	134
HspAI	GCGC	2 cut(s)	482, 1523
LmnI	GCTCC	1 cut(s)	27
Lsp1109I	GCAGC	5 cut(s)	42, 536, 1572, 1724, 1864
LweI	GCATC	2 cut(s)	265, 1549
MaeI	CTAG	2 cut(s)	993, 1392
MaeII	ACGT	1 cut(s)	134
MaeIII	GTNAC	3 cut(s)	287, 628, 1456
MbiI	CCGCTC	1 cut(s)	1111
MboII	GAAGA	7 cut(s)	34, 327, 494, 578, 1345, 1504, 1660
MflI	RGATCY	6 cut(s)	439, 796, 856, 1550, 1611, 1723
MhlI	GDGCHC	3 cut(s)	300, 516, 1686
MlyI	GAGTC	2 cut(s)	731, 1315
MseI	TTAA	5 cut(s)	684, 1326, 1488, 1608, 1865
MslI	CAYNNNNRTG	3 cut(s)	651, 807, 1065
MspA1I	CMGCKG	1 cut(s)	553
MspI	CCGG	6 cut(s)	83, 96, 106, 348, 446, 485
MspR9I	CCNGG	4 cut(s)	35, 107, 349, 1582
Mva1269I	GAATGC	1 cut(s)	1483
MvaI	CCWGG	2 cut(s)	35, 1582
MvnI	CGCG	1 cut(s)	302
MwoI	GCNNNNNNNGC	3 cut(s)	829, 1582, 1816
NciI	CCSGG	2 cut(s)	107, 349
NlaIV	GGNNCC	7 cut(s)	39, 75, 415, 489, 837, 910, 1725
NmeAIII	GCCGAG	1 cut(s)	50
NmuCI	GTSAC	2 cut(s)	287, 1456
NspI	RCATGY	2 cut(s)	832, 1735
PagI	TCATGA	1 cut(s)	13
PctI	GAATGC	1 cut(s)	1483
PfeI	GAWTC	7 cut(s)	535, 959, 1030, 1167, 1185, 1252, 1258
PflFI	GACNNNGTC	2 cut(s)	317, 1142
PkrI	GCNGC	8 cut(s)	32, 65, 68, 88, 526, 1587, 1714, 1854
PleI	GAGTC	2 cut(s)	730, 1315
PpsI	GAGTC	2 cut(s)	730, 1315
PpuMI	RGGWCCY	1 cut(s)	835
Psp5II	RGGWCCY	1 cut(s)	835
Psp6I	CCWGG	2 cut(s)	33, 1580
PspEI	GGTNACC	1 cut(s)	628
PspFI	CCCAGC	2 cut(s)	382, 1859
PspGI	CCWGG	2 cut(s)	33, 1580
PspN4I	GGNNCC	7 cut(s)	39, 75, 415, 489, 837, 910, 1725
PspPI	GGNCC	7 cut(s)	37, 73, 88, 319, 835, 909, 1057
PspPPI	RGGWCCY	1 cut(s)	835
PsuI	RGATCY	6 cut(s)	439, 796, 856, 1550, 1611, 1723
PsyI	GACNNNGTC	2 cut(s)	317, 1142
RsaI	GTAC	2 cut(s)	1022, 1696
RsaNI	GTAC	2 cut(s)	1021, 1695
RseI	CAYNNNNRTG	3 cut(s)	651, 807, 1065
SaqAI	TTAA	5 cut(s)	684, 1326, 1488, 1608, 1865
SatI	GCNGC	8 cut(s)	31, 64, 67, 87, 525, 1586, 1713, 1853
Sau96I	GGNCC	7 cut(s)	37, 73, 88, 319, 835, 909, 1057
ScaI	AGTACT	1 cut(s)	1022
SchI	GAGTC	2 cut(s)	731, 1315
ScrFI	CCNGG	4 cut(s)	35, 107, 349, 1582
SduI	GDGCHC	3 cut(s)	300, 516, 1686
SfaNI	GCATC	2 cut(s)	265, 1549
SfcI	CTRYAG	1 cut(s)	1024
SinI	GGWCC	4 cut(s)	319, 835, 909, 1057
SmiMI	CAYNNNNRTG	3 cut(s)	651, 807, 1065
SmlI	CTYRAG	4 cut(s)	1232, 1655, 1766, 1805
SmoI	CTYRAG	4 cut(s)	1232, 1655, 1766, 1805
SsiI	CCGC	7 cut(s)	53, 63, 66, 86, 553, 1111, 1381
SspMI	CTAG	2 cut(s)	993, 1392
StyD4I	CCNGG	4 cut(s)	33, 105, 347, 1580
StyI	CCWWGG	4 cut(s)	399, 688, 1391, 1717
TaaI	ACNGT	4 cut(s)	765, 1177, 1224, 1281
TaiI	ACGT	1 cut(s)	137
TaqI	TCGA	7 cut(s)	229, 273, 432, 518, 579, 988, 1165
TaqII	GACCGA	1 cut(s)	686
TatI	WGTACW	1 cut(s)	1020
TauI	GCSGC	3 cut(s)	66, 69, 89
TfiI	GAWTC	7 cut(s)	535, 959, 1030, 1167, 1185, 1252, 1258
Tru1I	TTAA	5 cut(s)	684, 1326, 1488, 1608, 1865
Tru9I	TTAA	5 cut(s)	684, 1326, 1488, 1608, 1865
TseFI	GTSAC	2 cut(s)	287, 1456
TseI	GCWGC	5 cut(s)	30, 524, 1585, 1712, 1852
Tsp45I	GTSAC	2 cut(s)	287, 1456
TspGWI	ACGGA	1 cut(s)	721
Tth111I	GACNNNGTC	2 cut(s)	317, 1142
VpaK11BI	GGWCC	4 cut(s)	319, 835, 909, 1057
XapI	RAATTY	3 cut(s)	125, 187, 754
XceI	RCATGY	2 cut(s)	832, 1735
XmaJI	CCTAGG	1 cut(s)	1391
XmiI	GTMKAC	1 cut(s)	924
XspI	CTAG	2 cut(s)	993, 1392
ZrmI	AGTACT	1 cut(s)	1022

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.