FvH4_2g17370

Acyl-coenzyme A thioesterase 9

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
14999679 .. 15003271
3593 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g17370.t1

Sequence Viewer

Length: 1308 bp
ATGGACCCAAACTCATCTCCTCCCAATTCCAACACCACCATTCCGGTGGTGGCAACCCTCCCTGCTTACGGGTCGGACTCTTCGACCAGGCCCATCAGCTTGTGGCCCGGAATGTTCCACTCGCCGGTGACCCAGGCACTGTGGGAAGCGAGGTCCCACATGTTTGAGAGGCTCTTGGACCCACCTGTAGACGCTCCTCCCCAGAGCGAATTGCTGAACAAGACTCCATCACAGAGCAGGACTACAATTCTCTACAATTTCTCTAGTGATTTTATACTGAGGGAGCAGTACAAGGATCCTTGGAATGAGGTCAGAATTGGGAAGCTGCTTGAAGACCTTGATGCTTTAGCTGGTACCATTTCTGTCAAGCACTGCTATGCTGTTGATACCACAACAAGGCCACTCTTGCTGGTCACTGCATCTGTTGACAAAATTGTCCTGAGGAAGCCAATTAGTGTTGACATTGACCTGAAAATTGTTGGTGCTGTCATTTGGGTGGGGCGGTCATCTATTGAGATCCATCTAGAAGTCACTCAATCCACAAAAGGCTGTGGCACTTCGGACTCGTTAGCCCTTTCAGCCAACTTCATATTTGTGGCTCGTGACTCTAAGACTGGGAAGGCTGCTCCAGTTAACAGGCTCTTACCAGAAACTGAAAGAGAACAATTTCTTTTCAAGGAAGCAGAAGCCAGAAATAATCTGAGGAAAAGAACGAGAGGAGGACAAAAAAGAGAGTTTGAGAATGGAGAAGTAAATAGACTTGAAAGCCTGTTGGCCGAGGGAAGGATATTCTGTGATATGCCTGCCTTGGCAGACAGAGATAGCATTCTTCTGAGGGACACTAGCTTAGAGAACTCATTGATCTGCCAACCACAGCAGAGAAACATACATGGTCGGATATTTGGAGGATTTTTAATGCACCGAGCATTTGAATTGGCTTTCTCCACAGCTTATGCCTTTGCTGGCCTGGTTCCTTGCTTTCTAGAAGTCGATCTTGTTGACTTCTTGAGACCTGTGGATGTTGGAGATTTCCTGCGTTTCAAATCTTGTGTTCTCTACACAGAAGTTAATCCAGATCAGCCTCTGATCACAATTGAAGTTGTTGCTCATGTTACCAGGCCTGAGCTCAGGTCCAGTGAGGTATCGAATACATTTTATTTTACTTTCACCGTACGTCCCGAGGCAAAGGCCACAAAAAATGGATTTAGGATACGGAATGTGGTTCCAGCAACAGAAGAGGAAGCACGACGTATACTGGAGCGCAAGGATGCTCAGGCCTTGCTTTCATCAACACTCGTGACTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

436

Amino Acids

48.72

Weight (kDa)

6.43

Isoelectric Point (pI)

49.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 434
Acc65I GGTACC 1 cut(s) 353
AccB1I GGYRCC 1 cut(s) 353
AccI GTMKAC 2 cut(s) 189, 1252
AciI CCGC 1 cut(s) 502
AclWI GGATC 3 cut(s) 290, 303, 511
AcoI YGGCCR 1 cut(s) 774
AfaI GTAC 3 cut(s) 290, 355, 1173
AfiI CCNNNNNNNGG 4 cut(s) 68, 124, 396, 783
AflIII ACRYGT 1 cut(s) 159
AgsI TTSAA 6 cut(s) 332, 676, 764, 932, 1042, 1097
AjnI CCWGG 4 cut(s) 86, 132, 966, 1115
AluBI AGCT 6 cut(s) 99, 325, 350, 846, 950, 1126
AluI AGCT 6 cut(s) 99, 325, 350, 846, 950, 1126
Alw21I GWGCWC 1 cut(s) 1128
Alw26I GTCTC 1 cut(s) 1003
AlwI GGATC 3 cut(s) 290, 303, 511
AlwNI CAGNNNCTG 3 cut(s) 139, 653, 1084
Ama87I CYCGRG 1 cut(s) 1178
AoxI GGCC 8 cut(s) 89, 104, 398, 774, 964, 1118, 1188, 1275
ApeKI GCWGC 2 cut(s) 325, 623
Asp700I GAANNNNTTC 1 cut(s) 666
Asp718I GGTACC 1 cut(s) 353
AspLEI GCGC 1 cut(s) 1263
AspS9I GGNCC 6 cut(s) 4, 90, 105, 153, 178, 1131
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 2 cut(s) 139, 1159
AvaI CYCGRG 1 cut(s) 1178
AvaII GGWCC 4 cut(s) 4, 153, 178, 1131
AxyI CCTNAGG 1 cut(s) 440
BamHI GGATCC 1 cut(s) 295
BanI GGYRCC 1 cut(s) 353
BanII GRGCYC 1 cut(s) 1128
BauI CACGAG 2 cut(s) 600, 1295
BbsI GAAGAC 1 cut(s) 339
Bbv12I GWGCWC 1 cut(s) 1128
BbvI GCAGC 2 cut(s) 312, 610
BccI CCATC 3 cut(s) 101, 235, 528
BciT130I CCWGG 4 cut(s) 88, 134, 968, 1117
BciVI GTATCC 1 cut(s) 1203
BclI TGATCA 1 cut(s) 1086
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 1 cut(s) 1003
BfaI CTAG 4 cut(s) 264, 524, 843, 983
BfmI CTRYAG 1 cut(s) 186
BfuI GTATCC 1 cut(s) 1203
BisI GCNGC 2 cut(s) 326, 624
BlsI GCNGC 2 cut(s) 327, 625
Bme1390I CCNGG 5 cut(s) 88, 108, 134, 968, 1117
Bme18I GGWCC 4 cut(s) 4, 153, 178, 1131
BmeT110I CYCGRG 1 cut(s) 1178
BmgT120I GGNCC 6 cut(s) 4, 90, 105, 153, 178, 1131
BmiI GGNNCC 7 cut(s) 6, 155, 180, 297, 355, 972, 1224
BmrFI CCNGG 5 cut(s) 88, 108, 134, 968, 1117
BmrI ACTGGG 1 cut(s) 624
BmsI GCATC 3 cut(s) 331, 428, 1258
BmuI ACTGGG 1 cut(s) 624
BpiI GAAGAC 1 cut(s) 339
BpmI CTGGAG 2 cut(s) 612, 1277
Bpu10I CCTNAGC 3 cut(s) 1122, 1127, 1272
BpuEI CTTGAG 1 cut(s) 1027
BpuMI CCSGG 1 cut(s) 108
BsaI GGTCTC 1 cut(s) 1003
BsaJI CCNNGG 5 cut(s) 132, 299, 777, 807, 1179
BsaWI WCCGGW 1 cut(s) 43
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 124, 396, 783
Bse118I RCCGGY 1 cut(s) 124
Bse1I ACTGG 4 cut(s) 619, 629, 1134, 1260
Bse21I CCTNAGG 1 cut(s) 440
BseBI CCWGG 4 cut(s) 88, 134, 968, 1117
BseDI CCNNGG 5 cut(s) 132, 299, 777, 807, 1179
BseGI GGATG 2 cut(s) 1024, 1273
BseLI CCNNNNNNNGG 4 cut(s) 68, 124, 396, 783
BseMII CTCAG 7 cut(s) 269, 431, 692, 824, 1113, 1141, 1286
BseNI ACTGG 4 cut(s) 619, 629, 1134, 1260
BseRI GAGGAG 3 cut(s) 9, 186, 732
BseXI GCAGC 2 cut(s) 312, 610
BshFI GGCC 8 cut(s) 91, 106, 400, 776, 966, 1120, 1190, 1277
BshNI GGYRCC 1 cut(s) 353
BsiHKAI GWGCWC 1 cut(s) 1128
BsiHKCI CYCGRG 1 cut(s) 1178
BsiSI CCGG 3 cut(s) 44, 108, 125
BsiWI CGTACG 1 cut(s) 1171
BslFI GGGAC 3 cut(s) 139, 851, 1161
BslI CCNNNNNNNGG 4 cut(s) 68, 124, 396, 783
BsmAI GTCTC 1 cut(s) 1003
BsmFI GGGAC 3 cut(s) 139, 851, 1161
BsmI GAATGC 1 cut(s) 825
BsnI GGCC 8 cut(s) 91, 106, 400, 776, 966, 1120, 1190, 1277
Bso31I GGTCTC 1 cut(s) 1003
BsoBI CYCGRG 1 cut(s) 1178
Bsp1286I GDGCHC 1 cut(s) 1128
Bsp143I GATC 6 cut(s) 295, 516, 861, 991, 1075, 1086
BspACI CCGC 1 cut(s) 502
BspANI GGCC 8 cut(s) 91, 106, 400, 776, 966, 1120, 1190, 1277
BspCNI CTCAG 7 cut(s) 270, 432, 693, 825, 1114, 1140, 1285
BspLI GGNNCC 7 cut(s) 6, 155, 180, 297, 355, 972, 1224
BspPI GGATC 3 cut(s) 290, 303, 511
BspT107I GGYRCC 1 cut(s) 353
BspTNI GGTCTC 1 cut(s) 1003
BsrFI RCCGGY 1 cut(s) 124
BsrI ACTGG 4 cut(s) 619, 629, 1134, 1260
BssAI RCCGGY 1 cut(s) 124
BssECI CCNNGG 5 cut(s) 132, 299, 777, 807, 1179
BssMI GATC 6 cut(s) 295, 516, 861, 991, 1075, 1086
BssNAI GTATAC 1 cut(s) 1253
BssSI CACGAG 2 cut(s) 600, 1295
BssT1I CCWWGG 2 cut(s) 299, 807
Bst1107I GTATAC 1 cut(s) 1253
Bst2BI CACGAG 2 cut(s) 600, 1295
Bst2UI CCWGG 4 cut(s) 88, 134, 968, 1117
Bst4CI ACNGT 2 cut(s) 141, 1171
Bst6I CTCTTC 2 cut(s) 85, 1230
BstC8I GCNNGC 2 cut(s) 804, 964
BstDEI CTNAG 9 cut(s) 278, 440, 609, 701, 833, 847, 1122, 1127, 1272
BstEII GGTNACC 1 cut(s) 127
BstF5I GGATG 2 cut(s) 1024, 1273
BstHHI GCGC 1 cut(s) 1263
BstKTI GATC 6 cut(s) 298, 519, 864, 994, 1078, 1089
BstMAI GTCTC 1 cut(s) 1003
BstMBI GATC 6 cut(s) 295, 516, 861, 991, 1075, 1086
BstMWI GCNNNNNNNGC 2 cut(s) 406, 578
BstNI CCWGG 4 cut(s) 88, 134, 968, 1117
BstNSI RCATGY 1 cut(s) 163
BstPI GGTNACC 1 cut(s) 127
BstSCI CCNGG 5 cut(s) 86, 106, 132, 966, 1115
BstSFI CTRYAG 1 cut(s) 186
BstV1I GCAGC 2 cut(s) 312, 610
BstV2I GAAGAC 1 cut(s) 339
BstX2I RGATCY 2 cut(s) 295, 516
BstXI CCANNNNNNTGG 1 cut(s) 46
BstYI RGATCY 2 cut(s) 295, 516
BstZ17I GTATAC 1 cut(s) 1253
Bsu36I CCTNAGG 1 cut(s) 440
BsuI GTATCC 1 cut(s) 1203
BsuRI GGCC 8 cut(s) 91, 106, 400, 776, 966, 1120, 1190, 1277
BtsCI GGATG 2 cut(s) 1024, 1273
BtsI GCAGTG 2 cut(s) 370, 414
BtsIMutI CAGTG 4 cut(s) 137, 370, 414, 1141
Cac8I GCNNGC 2 cut(s) 804, 964
CaiI CAGNNNCTG 3 cut(s) 139, 653, 1084
CfoI GCGC 1 cut(s) 1263
Cfr10I RCCGGY 1 cut(s) 124
Cfr13I GGNCC 6 cut(s) 4, 90, 105, 153, 178, 1131
CseI GACGC 1 cut(s) 200
Csp6I GTAC 3 cut(s) 289, 354, 1172
CviAII CATG 3 cut(s) 160, 890, 1109
CviQI GTAC 3 cut(s) 289, 354, 1172
DdeI CTNAG 9 cut(s) 278, 440, 609, 701, 833, 847, 1122, 1127, 1272
DpnI GATC 6 cut(s) 297, 518, 863, 993, 1077, 1088
DpnII GATC 6 cut(s) 295, 516, 861, 991, 1075, 1086
DrdI GACNNNNNNGTC 1 cut(s) 434
DseDI GACNNNNNNGTC 1 cut(s) 434
EaeI YGGCCR 1 cut(s) 774
Eam1104I CTCTTC 2 cut(s) 85, 1230
EarI CTCTTC 2 cut(s) 85, 1230
Ecl136II GAGCTC 1 cut(s) 1126
Eco130I CCWWGG 2 cut(s) 299, 807
Eco147I AGGCCT 2 cut(s) 1120, 1277
Eco24I GRGCYC 1 cut(s) 1128
Eco31I GGTCTC 1 cut(s) 1003
Eco47I GGWCC 4 cut(s) 4, 153, 178, 1131
Eco53kI GAGCTC 1 cut(s) 1126
Eco81I CCTNAGG 1 cut(s) 440
Eco88I CYCGRG 1 cut(s) 1178
Eco91I GGTNACC 1 cut(s) 127
EcoICRI GAGCTC 1 cut(s) 1126
EcoO109I RGGNCCY 1 cut(s) 153
EcoO65I GGTNACC 1 cut(s) 127
EcoRII CCWGG 4 cut(s) 86, 132, 966, 1115
EcoT14I CCWWGG 2 cut(s) 299, 807
EcoT38I GRGCYC 1 cut(s) 1128
ErhI CCWWGG 2 cut(s) 299, 807
FaeI CATG 3 cut(s) 163, 893, 1112
FalI AAGNNNNNCTT 2 cut(s) 978, 1010
FaqI GGGAC 3 cut(s) 139, 851, 1161
FatI CATG 3 cut(s) 159, 889, 1108
FbaI TGATCA 1 cut(s) 1086
FblI GTMKAC 2 cut(s) 189, 1252
Fnu4HI GCNGC 2 cut(s) 326, 624
FokI GGATG 2 cut(s) 1031, 1280
FriOI GRGCYC 1 cut(s) 1128
Fsp4HI GCNGC 2 cut(s) 326, 624
FspBI CTAG 4 cut(s) 264, 524, 843, 983
GlaI GCGC 1 cut(s) 1262
GluI GCNGC 2 cut(s) 326, 624
GsuI CTGGAG 2 cut(s) 612, 1277
HaeIII GGCC 8 cut(s) 91, 106, 400, 776, 966, 1120, 1190, 1277
HapII CCGG 3 cut(s) 44, 108, 125
HgaI GACGC 1 cut(s) 200
HhaI GCGC 1 cut(s) 1263
Hin1II CATG 3 cut(s) 163, 893, 1112
Hin6I GCGC 1 cut(s) 1261
HinP1I GCGC 1 cut(s) 1261
HincII GTYRAC 4 cut(s) 427, 460, 634, 1000
HindII GTYRAC 4 cut(s) 427, 460, 634, 1000
HinfI GANTC 4 cut(s) 77, 223, 563, 605
HpaI GTTAAC 1 cut(s) 634
HpaII CCGG 3 cut(s) 44, 108, 125
HphI GGTGA 2 cut(s) 139, 1159
Hpy166II GTNNAC 6 cut(s) 190, 427, 460, 634, 1000, 1253
Hpy188I TCNGA 7 cut(s) 76, 314, 562, 702, 834, 897, 1086
Hpy188III TCNNGA 8 cut(s) 439, 524, 602, 983, 1006, 1073, 1178, 1297
Hpy8I GTNNAC 6 cut(s) 190, 427, 460, 634, 1000, 1253
Hpy99I CGWCG 1 cut(s) 1251
HpyAV CCTTC 2 cut(s) 613, 777
HpyCH4III ACNGT 2 cut(s) 141, 1171
HpyCH4IV ACGT 2 cut(s) 1174, 1249
HpyCH4V TGCA 2 cut(s) 419, 919
HpyF10VI GCNNNNNNNGC 2 cut(s) 406, 578
HpyF3I CTNAG 9 cut(s) 278, 440, 609, 701, 833, 847, 1122, 1127, 1272
HpySE526I ACGT 2 cut(s) 1174, 1249
Hsp92II CATG 3 cut(s) 163, 893, 1112
HspAI GCGC 1 cut(s) 1261
KpnI GGTACC 1 cut(s) 357
Ksp22I TGATCA 1 cut(s) 1086
KspAI GTTAAC 1 cut(s) 634
Kzo9I GATC 6 cut(s) 295, 516, 861, 991, 1075, 1086
LmnI GCTCC 4 cut(s) 199, 283, 631, 1258
Lsp1109I GCAGC 2 cut(s) 312, 610
LweI GCATC 3 cut(s) 331, 428, 1258
MaeI CTAG 4 cut(s) 264, 524, 843, 983
MaeII ACGT 2 cut(s) 1174, 1249
MaeIII GTNAC 6 cut(s) 127, 412, 529, 602, 1111, 1297
MalI GATC 6 cut(s) 297, 518, 863, 993, 1077, 1088
MboI GATC 6 cut(s) 295, 516, 861, 991, 1075, 1086
MboII GAAGA 4 cut(s) 72, 344, 821, 1247
MfeI CAATTG 1 cut(s) 1092
MflI RGATCY 2 cut(s) 295, 516
MhlI GDGCHC 1 cut(s) 1128
MlyI GAGTC 4 cut(s) 71, 217, 557, 599
MmeI TCCRAC 4 cut(s) 54, 54, 875, 1003
MroXI GAANNNNTTC 1 cut(s) 666
MseI TTAA 3 cut(s) 633, 914, 1068
MslI CAYNNNNRTG 4 cut(s) 44, 375, 494, 593
MspI CCGG 3 cut(s) 44, 108, 125
MspR9I CCNGG 5 cut(s) 88, 108, 134, 968, 1117
MunI CAATTG 1 cut(s) 1092
Mva1269I GAATGC 1 cut(s) 825
MvaI CCWGG 4 cut(s) 88, 134, 968, 1117
MwoI GCNNNNNNNGC 2 cut(s) 406, 578
NciI CCSGG 1 cut(s) 108
NdeII GATC 6 cut(s) 295, 516, 861, 991, 1075, 1086
NlaIII CATG 3 cut(s) 163, 893, 1112
NlaIV GGNNCC 7 cut(s) 6, 155, 180, 297, 355, 972, 1224
NmeAIII GCCGAG 1 cut(s) 802
NmuCI GTSAC 5 cut(s) 127, 412, 529, 602, 1297
NspI RCATGY 1 cut(s) 163
PceI AGGCCT 2 cut(s) 1120, 1277
PciI ACATGT 1 cut(s) 159
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PctI GAATGC 1 cut(s) 825
PdmI GAANNNNTTC 1 cut(s) 666
Pfl23II CGTACG 1 cut(s) 1171
PkrI GCNGC 2 cut(s) 327, 625
PleI GAGTC 4 cut(s) 71, 217, 557, 599
PpsI GAGTC 4 cut(s) 71, 217, 557, 599
PpuMI RGGWCCY 1 cut(s) 153
PscI ACATGT 1 cut(s) 159
Psp124BI GAGCTC 1 cut(s) 1128
Psp5II RGGWCCY 1 cut(s) 153
Psp6I CCWGG 4 cut(s) 86, 132, 966, 1115
PspEI GGTNACC 1 cut(s) 127
PspGI CCWGG 4 cut(s) 86, 132, 966, 1115
PspLI CGTACG 1 cut(s) 1171
PspN4I GGNNCC 7 cut(s) 6, 155, 180, 297, 355, 972, 1224
PspPI GGNCC 6 cut(s) 4, 90, 105, 153, 178, 1131
PspPPI RGGWCCY 1 cut(s) 153
PstNI CAGNNNCTG 3 cut(s) 139, 653, 1084
PsuI RGATCY 2 cut(s) 295, 516
RsaI GTAC 3 cut(s) 290, 355, 1173
RsaNI GTAC 3 cut(s) 289, 354, 1172
RseI CAYNNNNRTG 4 cut(s) 44, 375, 494, 593
SacI GAGCTC 1 cut(s) 1128
SaqAI TTAA 3 cut(s) 633, 914, 1068
SatI GCNGC 2 cut(s) 326, 624
Sau3AI GATC 6 cut(s) 295, 516, 861, 991, 1075, 1086
Sau96I GGNCC 6 cut(s) 4, 90, 105, 153, 178, 1131
SchI GAGTC 4 cut(s) 71, 217, 557, 599
ScrFI CCNGG 5 cut(s) 88, 108, 134, 968, 1117
SduI GDGCHC 1 cut(s) 1128
SfaNI GCATC 3 cut(s) 331, 428, 1258
SfcI CTRYAG 1 cut(s) 186
SgrAI CRCCGGYG 1 cut(s) 124
SinI GGWCC 4 cut(s) 4, 153, 178, 1131
SmiMI CAYNNNNRTG 4 cut(s) 44, 375, 494, 593
SmlI CTYRAG 1 cut(s) 1006
SmoI CTYRAG 1 cut(s) 1006
SseBI AGGCCT 2 cut(s) 1120, 1277
SsiI CCGC 1 cut(s) 502
SspMI CTAG 4 cut(s) 264, 524, 843, 983
SstI GAGCTC 1 cut(s) 1128
StuI AGGCCT 2 cut(s) 1120, 1277
StyD4I CCNGG 5 cut(s) 86, 106, 132, 966, 1115
StyI CCWWGG 2 cut(s) 299, 807
TaaI ACNGT 2 cut(s) 141, 1171
TaiI ACGT 2 cut(s) 1177, 1252
TaqI TCGA 3 cut(s) 83, 990, 1145
TatI WGTACW 1 cut(s) 288
Tru1I TTAA 3 cut(s) 633, 914, 1068
Tru9I TTAA 3 cut(s) 633, 914, 1068
TscAI CASTG 4 cut(s) 144, 377, 421, 1141
TseFI GTSAC 5 cut(s) 127, 412, 529, 602, 1297
TseI GCWGC 2 cut(s) 325, 623
Tsp45I GTSAC 5 cut(s) 127, 412, 529, 602, 1297
TspDTI ATGAA 2 cut(s) 577, 1275
TspGWI ACGGA 1 cut(s) 1228
TspRI CASTG 4 cut(s) 144, 377, 421, 1141
VpaK11BI GGWCC 4 cut(s) 4, 153, 178, 1131
XbaI TCTAGA 2 cut(s) 523, 982
XceI RCATGY 1 cut(s) 163
XcmI CCANNNNNNNNNTGG 2 cut(s) 43, 46
XmiI GTMKAC 2 cut(s) 189, 1252
XmnI GAANNNNTTC 1 cut(s) 666
XspI CTAG 4 cut(s) 264, 524, 843, 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.