MD10G1147100.v1.1

Acyl-coenzyme A thioesterase 9

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
23405388 .. 23408923
3536 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1147100.v1.1.491

Sequence Viewer

Length: 1359 bp
ATGGCCTTGAATTCCTCTCCTCCATATCCCAATTCACCCGCCGCCATTCCCGTCGTCGCCACCCTCTCTTCCCCTTTCGAAAACCCGCCTCCGTCCCAAGATGGGCCCAACGGTTCGACCCGGAAGCCCATTAGCCTCTGGCCGGGAATGTACCAGTCGCCTGTGACGAATGCGCTGTGGGAGGCGAGGTCTAAAATTTTCGAGAGGTTTTTTCTGGACCCGCCGAAAGATGCCCCTCCGCAGAGCGAGTTGCTGAACAAAACGCCGTCGCAGAGCAGGACTTCGATTCTGTACAATTTCTCGACGGATTATATATTGCGGGAGCAGTACAGGGATCCTTGGAACGAGGTCCGAATTGGGAAGTTGCTTGAAGACCTTGATGCTTTAGCTGGAACCATTTCTGTAAAGCACTGTTGCGACGACAAAAGCACAACAAGGCCACTCTTATTGGTCACGGCATCTGTTGACAAGATTGTTCTGAAGAAGCCAATTAGTGTTGATATTGATCTGAAAATAGTGGGTGCTGTCATATGGGTTGGACGGTCATCTATTGAGATTCAACTAGAAGTTATTCAGTCAGCAACAGACGGATCTGACATTGCAGATTCAGTAGCCCTTTCAGCAAACTTCATATTTGTGGCCCGTGATTCTAAGACTGGGAAAGCTGCCCCAGTTAATCGGTTATCGCCAGAAACTCAAAGAGAAATATTGCTTTTCGAGGAAGCGGAAGCCAGAAATAATCTGAGGAAAAGAAAGAAAGGAGGAGGAGACAGAAGGGAGTTTGAGAATGGAGAATTAAATAGAGTTAAAACACTGTTGGCTGAGGGAAGGATCTTCTGTGATATGCCTGCCTTGGCAGACAGAGATAGCATTCTTCTAAAGGATACCCGCTTGGAAAACTCATTGATCTGCCAACCACAACAGAGAAACATCCATGGTCGGATCTTTGGAGGGTTTTTGATGCACCGAGCATTTGAATTGGCTTTCTCCACGGCTTATGCCTTTGCAGGCTTGGTGCCTTGCTTTCTAGAAGTCGATCATGTTGACTTCTTGAAACCTGTGGACGTTGGAGATTTCCTGCGTTTCAAATCTTGTGTTCTCTACACAGAAGTTCAGAATCCGGATCAACCTCTAATTAATATCGAAGTTGTTGCCCATGTTACCAGGCCTGAACTCAGGTCTACTGAGGTGTCGAACACATTTTATTTCACTTTCACCGTACGCCCTGAGGCAAAGGCCACAAAAAATGGATTCAGGATACTGAATGTGGTTCCGGCAACAGAGGAAGAAGCACGTCATATAGTAGAACGCATGGATGCTCAAGCCTTGCTTTCAACAAAAGGAGTCATCAGCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

453

Amino Acids

50.43

Weight (kDa)

6.37

Isoelectric Point (pI)

51.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1015
AccI GTMKAC 1 cut(s) 1181
AccIII TCCGGA 1 cut(s) 1120
AciI CCGC 8 cut(s) 39, 42, 86, 221, 239, 319, 725, 889
AclWI GGATC 6 cut(s) 329, 342, 598, 839, 950, 1131
AcoI YGGCCR 1 cut(s) 140
AcsI RAATTY 2 cut(s) 10, 195
AcuI CTGAAG 1 cut(s) 500
AfaI GTAC 4 cut(s) 152, 293, 329, 1221
AfiI CCNNNNNNNGG 2 cut(s) 102, 142
AgsI TTSAA 7 cut(s) 10, 371, 560, 977, 1054, 1087, 1335
AjiI CACGTC 1 cut(s) 1295
AjnI CCWGG 1 cut(s) 1163
AluBI AGCT 2 cut(s) 389, 665
AluI AGCT 2 cut(s) 389, 665
Alw26I GTCTC 1 cut(s) 762
AlwI GGATC 6 cut(s) 329, 342, 598, 839, 950, 1131
Aor13HI TCCGGA 1 cut(s) 1120
AoxI GGCC 7 cut(s) 3, 104, 140, 437, 639, 1166, 1236
ApaI GGGCCC 1 cut(s) 108
ApeKI GCWGC 1 cut(s) 665
ApoI RAATTY 2 cut(s) 10, 195
AseI ATTAAT 1 cut(s) 1137
Asp700I GAANNNNTTC 2 cut(s) 397, 570
AspLEI GCGC 1 cut(s) 175
AspS9I GGNCC 5 cut(s) 104, 105, 217, 349, 640
AsuC2I CCSGG 2 cut(s) 121, 144
AsuHPI GGTGA 2 cut(s) 27, 1207
AsuII TTCGAA 1 cut(s) 78
AvaII GGWCC 2 cut(s) 217, 349
AxyI CCTNAGG 1 cut(s) 1227
BaeGI GKGCMC 1 cut(s) 108
BamHI GGATCC 1 cut(s) 334
BanI GGYRCC 1 cut(s) 1015
BanII GRGCYC 1 cut(s) 108
BbsI GAAGAC 1 cut(s) 378
BbvCI CCTCAGC 1 cut(s) 822
BbvI GCAGC 1 cut(s) 652
BccI CCATC 1 cut(s) 95
BceAI ACGGC 3 cut(s) 250, 471, 1008
BcgI CGANNNNNNTGC 2 cut(s) 1133, 1167
BciT130I CCWGG 1 cut(s) 1165
BciVI GTATCC 2 cut(s) 877, 1251
BcnI CCSGG 2 cut(s) 121, 144
BcoDI GTCTC 1 cut(s) 762
BfaI CTAG 2 cut(s) 563, 1028
BfuI GTATCC 2 cut(s) 877, 1251
BisI GCNGC 2 cut(s) 42, 666
BlsI GCNGC 2 cut(s) 43, 667
Bme1390I CCNGG 3 cut(s) 121, 144, 1165
Bme18I GGWCC 2 cut(s) 217, 349
BmgBI CACGTC 1 cut(s) 1295
BmgT120I GGNCC 5 cut(s) 104, 105, 217, 349, 640
BmiI GGNNCC 6 cut(s) 106, 219, 336, 394, 1017, 1272
BmrFI CCNGG 3 cut(s) 121, 144, 1165
BmrI ACTGGG 2 cut(s) 665, 666
BmsI GCATC 5 cut(s) 220, 370, 467, 951, 1306
BmuI ACTGGG 2 cut(s) 665, 666
BpiI GAAGAC 1 cut(s) 378
Bpu10I CCTNAGC 1 cut(s) 822
Bpu14I TTCGAA 1 cut(s) 78
BpuEI CTTGAG 1 cut(s) 1305
BpuMI CCSGG 2 cut(s) 121, 144
BsaBI GATNNNNATC 1 cut(s) 504
BsaJI CCNNGG 4 cut(s) 338, 852, 934, 990
BsaWI WCCGGW 1 cut(s) 1120
BsaXI ACNNNNNCTCC 2 cut(s) 173, 203
Bsc4I CCNNNNNNNGG 2 cut(s) 102, 142
Bse1I ACTGG 3 cut(s) 154, 661, 671
Bse21I CCTNAGG 1 cut(s) 1227
Bse3DI GCAATG 1 cut(s) 597
Bse8I GATNNNNATC 1 cut(s) 504
BseAI TCCGGA 1 cut(s) 1120
BseBI CCWGG 1 cut(s) 1165
BseDI CCNNGG 4 cut(s) 338, 852, 934, 990
BseGI GGATG 2 cut(s) 930, 1321
BseJI GATNNNNATC 1 cut(s) 504
BseLI CCNNNNNNNGG 2 cut(s) 102, 142
BseMI GCAATG 1 cut(s) 597
BseMII CTCAG 5 cut(s) 734, 813, 1176, 1189, 1218
BseNI ACTGG 3 cut(s) 154, 661, 671
BseRI GAGGAG 3 cut(s) 9, 777, 780
BseSI GKGCMC 1 cut(s) 108
BseXI GCAGC 1 cut(s) 652
BshFI GGCC 7 cut(s) 5, 106, 142, 439, 641, 1168, 1238
BshNI GGYRCC 1 cut(s) 1015
BsiSI CCGG 4 cut(s) 121, 143, 1121, 1274
BsiWI CGTACG 1 cut(s) 1219
BslFI GGGAC 1 cut(s) 79
BslI CCNNNNNNNGG 2 cut(s) 102, 142
BsmAI GTCTC 1 cut(s) 762
BsmFI GGGAC 1 cut(s) 79
BsmI GAATGC 2 cut(s) 175, 870
BsnI GGCC 7 cut(s) 5, 106, 142, 439, 641, 1168, 1238
Bsp119I TTCGAA 1 cut(s) 78
Bsp120I GGGCCC 1 cut(s) 104
Bsp1286I GDGCHC 1 cut(s) 108
Bsp13I TCCGGA 1 cut(s) 1120
Bsp1407I TGTACA 1 cut(s) 291
Bsp143I GATC 8 cut(s) 334, 505, 590, 831, 906, 942, 1036, 1123
Bsp19I CCATGG 1 cut(s) 934
BspACI CCGC 8 cut(s) 39, 42, 86, 221, 239, 319, 725, 889
BspANI GGCC 7 cut(s) 5, 106, 142, 439, 641, 1168, 1238
BspCNI CTCAG 5 cut(s) 735, 814, 1177, 1188, 1219
BspEI TCCGGA 1 cut(s) 1120
BspLI GGNNCC 6 cut(s) 106, 219, 336, 394, 1017, 1272
BspPI GGATC 6 cut(s) 329, 342, 598, 839, 950, 1131
BspT104I TTCGAA 1 cut(s) 78
BspT107I GGYRCC 1 cut(s) 1015
BsrDI GCAATG 1 cut(s) 597
BsrGI TGTACA 1 cut(s) 291
BsrI ACTGG 3 cut(s) 154, 661, 671
BssECI CCNNGG 4 cut(s) 338, 852, 934, 990
BssMI GATC 8 cut(s) 334, 505, 590, 831, 906, 942, 1036, 1123
BssT1I CCWWGG 3 cut(s) 338, 852, 934
Bst2UI CCWGG 1 cut(s) 1165
Bst4CI ACNGT 5 cut(s) 113, 413, 543, 816, 1219
Bst6I CTCTTC 1 cut(s) 73
BstAUI TGTACA 1 cut(s) 291
BstBI TTCGAA 1 cut(s) 78
BstC8I GCNNGC 2 cut(s) 849, 1009
BstDEI CTNAG 6 cut(s) 651, 743, 822, 1175, 1185, 1227
BstDSI CCRYGG 2 cut(s) 934, 990
BstF5I GGATG 2 cut(s) 930, 1321
BstHHI GCGC 1 cut(s) 175
BstKTI GATC 8 cut(s) 337, 508, 593, 834, 909, 945, 1039, 1126
BstMAI GTCTC 1 cut(s) 762
BstMBI GATC 8 cut(s) 334, 505, 590, 831, 906, 942, 1036, 1123
BstMWI GCNNNNNNNGC 1 cut(s) 620
BstNI CCWGG 1 cut(s) 1165
BstSCI CCNGG 3 cut(s) 119, 142, 1163
BstSLI GKGCMC 1 cut(s) 108
BstV1I GCAGC 1 cut(s) 652
BstV2I GAAGAC 1 cut(s) 378
BstX2I RGATCY 4 cut(s) 334, 590, 831, 942
BstYI RGATCY 4 cut(s) 334, 590, 831, 942
Bsu36I CCTNAGG 1 cut(s) 1227
BsuI GTATCC 2 cut(s) 877, 1251
BsuRI GGCC 7 cut(s) 5, 106, 142, 439, 641, 1168, 1238
BtgI CCRYGG 2 cut(s) 934, 990
BtrI CACGTC 1 cut(s) 1295
BtsCI GGATG 2 cut(s) 930, 1321
BtsIMutI CAGTG 2 cut(s) 409, 812
Cac8I GCNNGC 2 cut(s) 849, 1009
CfoI GCGC 1 cut(s) 175
Cfr13I GGNCC 5 cut(s) 104, 105, 217, 349, 640
Csp6I GTAC 4 cut(s) 151, 292, 328, 1220
CspCI CAANNNNNGTGG 2 cut(s) 429, 464
CviAII CATG 4 cut(s) 935, 1040, 1157, 1312
CviQI GTAC 4 cut(s) 151, 292, 328, 1220
DdeI CTNAG 6 cut(s) 651, 743, 822, 1175, 1185, 1227
DpnI GATC 8 cut(s) 336, 507, 592, 833, 908, 944, 1038, 1125
DpnII GATC 8 cut(s) 334, 505, 590, 831, 906, 942, 1036, 1123
EaeI YGGCCR 1 cut(s) 140
Eam1104I CTCTTC 1 cut(s) 73
EarI CTCTTC 1 cut(s) 73
Eco130I CCWWGG 3 cut(s) 338, 852, 934
Eco147I AGGCCT 1 cut(s) 1168
Eco24I GRGCYC 1 cut(s) 108
Eco47I GGWCC 2 cut(s) 217, 349
Eco57I CTGAAG 1 cut(s) 500
Eco81I CCTNAGG 1 cut(s) 1227
EcoRI GAATTC 1 cut(s) 10
EcoRII CCWGG 1 cut(s) 1163
EcoT14I CCWWGG 3 cut(s) 338, 852, 934
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 3 cut(s) 338, 852, 934
FaeI CATG 4 cut(s) 938, 1043, 1160, 1315
FalI AAGNNNNNCTT 2 cut(s) 1314, 1346
FaqI GGGAC 1 cut(s) 79
FatI CATG 4 cut(s) 934, 1039, 1156, 1311
FauI CCCGC 5 cut(s) 46, 93, 228, 312, 896
FauNDI CATATG 1 cut(s) 530
FblI GTMKAC 1 cut(s) 1181
Fnu4HI GCNGC 2 cut(s) 42, 666
FokI GGATG 2 cut(s) 917, 1328
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 2 cut(s) 42, 666
FspBI CTAG 2 cut(s) 563, 1028
GlaI GCGC 1 cut(s) 174
GluI GCNGC 2 cut(s) 42, 666
HaeIII GGCC 7 cut(s) 5, 106, 142, 439, 641, 1168, 1238
HapII CCGG 4 cut(s) 121, 143, 1121, 1274
HhaI GCGC 1 cut(s) 175
Hin1II CATG 4 cut(s) 938, 1043, 1160, 1315
Hin6I GCGC 1 cut(s) 173
HinP1I GCGC 1 cut(s) 173
HincII GTYRAC 2 cut(s) 466, 1045
HindII GTYRAC 2 cut(s) 466, 1045
HinfI GANTC 7 cut(s) 286, 556, 605, 647, 1117, 1251, 1344
HpaII CCGG 4 cut(s) 121, 143, 1121, 1274
HphI GGTGA 2 cut(s) 27, 1207
Hpy166II GTNNAC 4 cut(s) 466, 1045, 1063, 1182
Hpy188I TCNGA 7 cut(s) 353, 480, 510, 595, 744, 942, 1116
Hpy188III TCNNGA 7 cut(s) 202, 215, 301, 1028, 1051, 1121, 1255
Hpy8I GTNNAC 4 cut(s) 466, 1045, 1063, 1182
Hpy99I CGWCG 5 cut(s) 56, 59, 271, 307, 422
HpyAV CCTTC 2 cut(s) 768, 822
HpyCH4III ACNGT 5 cut(s) 113, 413, 543, 816, 1219
HpyCH4IV ACGT 2 cut(s) 1065, 1294
HpyCH4V TGCA 3 cut(s) 602, 964, 1007
HpyF10VI GCNNNNNNNGC 1 cut(s) 620
HpyF3I CTNAG 6 cut(s) 651, 743, 822, 1175, 1185, 1227
HpySE526I ACGT 2 cut(s) 1065, 1294
Hsp92II CATG 4 cut(s) 938, 1043, 1160, 1315
HspAI GCGC 1 cut(s) 173
Kpn2I TCCGGA 1 cut(s) 1120
Kzo9I GATC 8 cut(s) 334, 505, 590, 831, 906, 942, 1036, 1123
LmnI GCTCC 1 cut(s) 322
Lsp1109I GCAGC 1 cut(s) 652
LweI GCATC 5 cut(s) 220, 370, 467, 951, 1306
MaeI CTAG 2 cut(s) 563, 1028
MaeII ACGT 2 cut(s) 1065, 1294
MaeIII GTNAC 3 cut(s) 163, 451, 1159
MalI GATC 8 cut(s) 336, 507, 592, 833, 908, 944, 1038, 1125
MboI GATC 8 cut(s) 334, 505, 590, 831, 906, 942, 1036, 1123
MboII GAAGA 6 cut(s) 60, 383, 493, 826, 866, 1298
MflI RGATCY 4 cut(s) 334, 590, 831, 942
MhlI GDGCHC 1 cut(s) 108
MluCI AATT 9 cut(s) 10, 31, 195, 295, 354, 489, 794, 977, 1134
MlyI GAGTC 1 cut(s) 1353
MmeI TCCRAC 3 cut(s) 517, 920, 1048
MroI TCCGGA 1 cut(s) 1120
MroXI GAANNNNTTC 2 cut(s) 397, 570
MseI TTAA 4 cut(s) 675, 797, 807, 1137
MslI CAYNNNNRTG 1 cut(s) 635
MspI CCGG 4 cut(s) 121, 143, 1121, 1274
MspR9I CCNGG 3 cut(s) 121, 144, 1165
Mva1269I GAATGC 2 cut(s) 175, 870
MvaI CCWGG 1 cut(s) 1165
MwoI GCNNNNNNNGC 1 cut(s) 620
NciI CCSGG 2 cut(s) 121, 144
NcoI CCATGG 1 cut(s) 934
NdeI CATATG 1 cut(s) 530
NdeII GATC 8 cut(s) 334, 505, 590, 831, 906, 942, 1036, 1123
NlaIII CATG 4 cut(s) 938, 1043, 1160, 1315
NlaIV GGNNCC 6 cut(s) 106, 219, 336, 394, 1017, 1272
NmuCI GTSAC 2 cut(s) 163, 451
NspV TTCGAA 1 cut(s) 78
PceI AGGCCT 1 cut(s) 1168
PcsI WCGNNNNNNNCGW 1 cut(s) 164
PctI GAATGC 2 cut(s) 175, 870
PdmI GAANNNNTTC 2 cut(s) 397, 570
PfeI GAWTC 6 cut(s) 286, 556, 605, 647, 1117, 1251
Pfl23II CGTACG 1 cut(s) 1219
PkrI GCNGC 2 cut(s) 43, 667
PleI GAGTC 1 cut(s) 1352
PpsI GAGTC 1 cut(s) 1352
PshBI ATTAAT 1 cut(s) 1137
Psp6I CCWGG 1 cut(s) 1163
PspGI CCWGG 1 cut(s) 1163
PspLI CGTACG 1 cut(s) 1219
PspN4I GGNNCC 6 cut(s) 106, 219, 336, 394, 1017, 1272
PspOMI GGGCCC 1 cut(s) 104
PspPI GGNCC 5 cut(s) 104, 105, 217, 349, 640
PsuI RGATCY 4 cut(s) 334, 590, 831, 942
RsaI GTAC 4 cut(s) 152, 293, 329, 1221
RsaNI GTAC 4 cut(s) 151, 292, 328, 1220
RseI CAYNNNNRTG 1 cut(s) 635
SaqAI TTAA 4 cut(s) 675, 797, 807, 1137
SatI GCNGC 2 cut(s) 42, 666
Sau3AI GATC 8 cut(s) 334, 505, 590, 831, 906, 942, 1036, 1123
Sau96I GGNCC 5 cut(s) 104, 105, 217, 349, 640
SchI GAGTC 1 cut(s) 1353
ScrFI CCNGG 3 cut(s) 121, 144, 1165
SduI GDGCHC 1 cut(s) 108
SfaNI GCATC 5 cut(s) 220, 370, 467, 951, 1306
SfuI TTCGAA 1 cut(s) 78
SinI GGWCC 2 cut(s) 217, 349
SmiMI CAYNNNNRTG 1 cut(s) 635
SmlI CTYRAG 1 cut(s) 1320
SmoI CTYRAG 1 cut(s) 1320
Sse9I AATT 9 cut(s) 10, 31, 195, 295, 354, 489, 794, 977, 1134
SseBI AGGCCT 1 cut(s) 1168
SsiI CCGC 8 cut(s) 39, 42, 86, 221, 239, 319, 725, 889
SspI AATATT 1 cut(s) 708
SspMI CTAG 2 cut(s) 563, 1028
StuI AGGCCT 1 cut(s) 1168
StyD4I CCNGG 3 cut(s) 119, 142, 1163
StyI CCWWGG 3 cut(s) 338, 852, 934
TaaI ACNGT 5 cut(s) 113, 413, 543, 816, 1219
TaiI ACGT 2 cut(s) 1068, 1297
TaqI TCGA 9 cut(s) 78, 116, 201, 284, 302, 717, 1035, 1143, 1193
TasI AATT 9 cut(s) 10, 31, 195, 295, 354, 489, 794, 977, 1134
TatI WGTACW 2 cut(s) 291, 327
TauI GCSGC 1 cut(s) 44
TfiI GAWTC 6 cut(s) 286, 556, 605, 647, 1117, 1251
Tru1I TTAA 4 cut(s) 675, 797, 807, 1137
Tru9I TTAA 4 cut(s) 675, 797, 807, 1137
TscAI CASTG 2 cut(s) 416, 819
TseFI GTSAC 2 cut(s) 163, 451
TseI GCWGC 1 cut(s) 665
Tsp45I GTSAC 2 cut(s) 163, 451
TspDTI ATGAA 1 cut(s) 619
TspGWI ACGGA 3 cut(s) 81, 320, 603
TspRI CASTG 2 cut(s) 416, 819
VpaK11BI GGWCC 2 cut(s) 217, 349
VspI ATTAAT 1 cut(s) 1137
XapI RAATTY 2 cut(s) 10, 195
XbaI TCTAGA 1 cut(s) 1027
XmiI GTMKAC 1 cut(s) 1181
XmnI GAANNNNTTC 2 cut(s) 397, 570
XspI CTAG 2 cut(s) 563, 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.