Rroxscaffold_7G00186630

Acyl-coenzyme A thioesterase 9

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
25950799 .. 25954556
3758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00186630.1

Sequence Viewer

Length: 1335 bp
ATGGACCCAAATTCATCTCCTTCCAATTCCAACACCACCATTCCGGTAGTTGCAACCCTCCCCGCTCTCGGGTCGGACTCTTTGACCCGGAAGCCCATCAGCTTGTGGCCCGGAATGTTCCACTCGCCGGTGACACAGGCACTGTGGGAAGCGAGGTCTCACATGTTCGAGAGGCTCTTGGACCCACCGGCAGACGCTCCTCCGCAGAGCGAATTGCTAAACAAGACTCCGTCTCAGAGCAGGACTACAATTCTGTACAATTTCTCTACTGATTTTATACTGAGGGAGCAGTACAGGGACCCTTGGAATGAGGTCAGAATTGGGAAACTGCTTGAAGACCTTGATGCTTTAGCTGGAACCATTTCTGTCAAGCACTGCTATGCTGTTGATACCACAACGAGGCCACTCTTGCTGGTCACTGCATCTGTTGACAAGATTGTCTTGAAGAAGCCGATTAGTGTTGACATTGACCTGAAAATAGCTGGTGCTGTCATATGGGTGGGGCGATCATCTATTGAGATCCAACTAGAAGTTACTCAATCCACAAAAGGCTGTGACAATTCGGACTCATTAGCCCTTTCAGCCAACTTCATATTTGTGGCTCGTGACTCTAAGACTGGGAAGGCTGCTCCAGTTAATAGGCTCTTACCAGAAACTGAAAGAGAACAATTGCTTTTCAAGGAAGCAGAAACCAGAAATACTCTGAGGAAGAGAACGAAAGGAGGAGAAAAAGGGAGTTTGAGAATGGAGAAAGATAGCATTCTTCTGAGGGATACCAGCTTAGAGAACTCATTGATCTGCCAACCACAGCAGAGAAACATCCATGGTCGGATCTTTGGAGGATTTTTAATGCACAGAGCATTTGAATTGGCTTTCTCCACAGCTTATGCTTTTGCTGGCCTGGTACCTTGCTTTCTAGAAGTCGATCACGTTGACTTCTTGAGACCTGTGGATGTTGGAGATTTCCTGCGTTTCAAATCTTGTGTTCTCTACACAGAAGTTAATCCAGATCACCCTCTGATTACTATTGAAGTTGTTGCTCATGTTACCAGGCCTGAGCTCAGGTCCAGTGAGGTGTCAAATACATTTTATTTTACTTTCACCGTACGTCCCGAGGCAAAGGCCACAAAAAATGGATTTAGGATACGGAATGTGGTTCCAGCAACAGAAGAAGAAGCACGACGTATACTGGAGCGCAAGGATGCTCAGGATGGATTTTATACGTTGCAAGTACTTCGCCCTCTGTATTTCTTTGAGGAGCAAGATTGGAAAAGAAGAAGCATCTGTAAAGAGCAAGATGATATGGATGAAGATTGGAGTTGGAGGATGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

444

Amino Acids

50.44

Weight (kDa)

6.14

Isoelectric Point (pI)

52.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 437
Acc65I GGTACC 1 cut(s) 904
AccB1I GGYRCC 1 cut(s) 904
AccBSI CCGCTC 1 cut(s) 65
AccI GTMKAC 1 cut(s) 1186
AciI CCGC 2 cut(s) 63, 203
AclWI GGATC 2 cut(s) 514, 839
AcsI RAATTY 1 cut(s) 10
AfaI GTAC 5 cut(s) 257, 293, 906, 1107, 1233
AfiI CCNNNNNNNGG 4 cut(s) 68, 69, 127, 399
AflIII ACRYGT 1 cut(s) 162
AgsI TTSAA 6 cut(s) 335, 445, 679, 866, 976, 1031
AjnI CCWGG 2 cut(s) 900, 1049
AluBI AGCT 6 cut(s) 102, 353, 482, 780, 884, 1060
AluI AGCT 6 cut(s) 102, 353, 482, 780, 884, 1060
Alw21I GWGCWC 1 cut(s) 1062
Alw26I GTCTC 3 cut(s) 162, 237, 937
AlwI GGATC 2 cut(s) 514, 839
AlwNI CAGNNNCTG 2 cut(s) 142, 656
Ama87I CYCGRG 2 cut(s) 68, 1112
AoxI GGCC 5 cut(s) 107, 401, 898, 1052, 1122
ApeKI GCWGC 1 cut(s) 626
ApoI RAATTY 1 cut(s) 10
Asp700I GAANNNNTTC 1 cut(s) 361
Asp718I GGTACC 1 cut(s) 904
AspLEI GCGC 1 cut(s) 1197
AspS9I GGNCC 5 cut(s) 4, 108, 181, 298, 1065
AsuC2I CCSGG 2 cut(s) 88, 111
AsuHPI GGTGA 3 cut(s) 142, 1004, 1093
AvaI CYCGRG 2 cut(s) 68, 1112
AvaII GGWCC 4 cut(s) 4, 181, 298, 1065
BanI GGYRCC 1 cut(s) 904
BanII GRGCYC 1 cut(s) 1062
BauI CACGAG 1 cut(s) 603
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 1 cut(s) 1062
BbvI GCAGC 1 cut(s) 613
BccI CCATC 2 cut(s) 104, 1205
BcgI CGANNNNNNTGC 2 cut(s) 1217, 1251
BciT130I CCWGG 2 cut(s) 902, 1051
BciVI GTATCC 2 cut(s) 766, 1137
BcnI CCSGG 2 cut(s) 88, 111
BcoDI GTCTC 3 cut(s) 162, 237, 937
BfaI CTAG 2 cut(s) 527, 917
BfuI GTATCC 2 cut(s) 766, 1137
BisI GCNGC 1 cut(s) 627
BlsI GCNGC 1 cut(s) 628
BmcAI AGTACT 1 cut(s) 1233
Bme1390I CCNGG 4 cut(s) 88, 111, 902, 1051
Bme18I GGWCC 4 cut(s) 4, 181, 298, 1065
BmeT110I CYCGRG 2 cut(s) 68, 1112
BmgT120I GGNCC 5 cut(s) 4, 108, 181, 298, 1065
BmiI GGNNCC 7 cut(s) 6, 183, 299, 300, 358, 906, 1158
BmrFI CCNGG 4 cut(s) 88, 111, 902, 1051
BmrI ACTGGG 1 cut(s) 627
BmsI GCATC 4 cut(s) 334, 431, 1192, 1290
BmuI ACTGGG 1 cut(s) 627
BpiI GAAGAC 1 cut(s) 342
BpmI CTGGAG 2 cut(s) 615, 1211
Bpu10I CCTNAGC 3 cut(s) 1056, 1061, 1206
BpuEI CTTGAG 1 cut(s) 961
BpuMI CCSGG 2 cut(s) 88, 111
BsaI GGTCTC 2 cut(s) 162, 937
BsaJI CCNNGG 3 cut(s) 302, 823, 1113
BsaWI WCCGGW 1 cut(s) 43
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 69, 127, 399
Bse118I RCCGGY 2 cut(s) 127, 187
Bse1I ACTGG 4 cut(s) 622, 632, 1068, 1194
BseBI CCWGG 2 cut(s) 902, 1051
BseDI CCNNGG 3 cut(s) 302, 823, 1113
BseGI GGATG 6 cut(s) 819, 958, 1207, 1216, 1312, 1332
BseLI CCNNNNNNNGG 4 cut(s) 68, 69, 127, 399
BseMII CTCAG 7 cut(s) 248, 272, 695, 758, 1047, 1075, 1220
BseNI ACTGG 4 cut(s) 622, 632, 1068, 1194
BseRI GAGGAG 3 cut(s) 189, 738, 1271
BseXI GCAGC 1 cut(s) 613
BshFI GGCC 5 cut(s) 109, 403, 900, 1054, 1124
BshNI GGYRCC 1 cut(s) 904
BsiHKAI GWGCWC 1 cut(s) 1062
BsiHKCI CYCGRG 2 cut(s) 68, 1112
BsiSI CCGG 5 cut(s) 44, 88, 111, 128, 188
BsiWI CGTACG 1 cut(s) 1105
BslFI GGGAC 2 cut(s) 311, 1095
BslI CCNNNNNNNGG 4 cut(s) 68, 69, 127, 399
BsmAI GTCTC 3 cut(s) 162, 237, 937
BsmBI CGTCTC 1 cut(s) 237
BsmFI GGGAC 2 cut(s) 311, 1095
BsmI GAATGC 1 cut(s) 759
BsnI GGCC 5 cut(s) 109, 403, 900, 1054, 1124
Bso31I GGTCTC 2 cut(s) 162, 937
BsoBI CYCGRG 2 cut(s) 68, 1112
Bsp1286I GDGCHC 1 cut(s) 1062
Bsp1407I TGTACA 1 cut(s) 255
Bsp143I GATC 6 cut(s) 506, 519, 795, 831, 925, 1009
Bsp19I CCATGG 1 cut(s) 823
BspACI CCGC 2 cut(s) 63, 203
BspANI GGCC 5 cut(s) 109, 403, 900, 1054, 1124
BspCNI CTCAG 7 cut(s) 247, 273, 696, 759, 1048, 1074, 1219
BspLI GGNNCC 7 cut(s) 6, 183, 299, 300, 358, 906, 1158
BspPI GGATC 2 cut(s) 514, 839
BspT107I GGYRCC 1 cut(s) 904
BspTNI GGTCTC 2 cut(s) 162, 937
BsrBI CCGCTC 1 cut(s) 65
BsrFI RCCGGY 2 cut(s) 127, 187
BsrGI TGTACA 1 cut(s) 255
BsrI ACTGG 4 cut(s) 622, 632, 1068, 1194
BssAI RCCGGY 2 cut(s) 127, 187
BssECI CCNNGG 3 cut(s) 302, 823, 1113
BssMI GATC 6 cut(s) 506, 519, 795, 831, 925, 1009
BssNAI GTATAC 1 cut(s) 1187
BssSI CACGAG 1 cut(s) 603
BssT1I CCWWGG 2 cut(s) 302, 823
Bst1107I GTATAC 1 cut(s) 1187
Bst2BI CACGAG 1 cut(s) 603
Bst2UI CCWGG 2 cut(s) 902, 1051
Bst4CI ACNGT 2 cut(s) 144, 1105
Bst6I CTCTTC 1 cut(s) 704
BstAUI TGTACA 1 cut(s) 255
BstC8I GCNNGC 1 cut(s) 898
BstDEI CTNAG 9 cut(s) 234, 281, 612, 704, 767, 781, 1056, 1061, 1206
BstDSI CCRYGG 1 cut(s) 823
BstF5I GGATG 6 cut(s) 819, 958, 1207, 1216, 1312, 1332
BstHHI GCGC 1 cut(s) 1197
BstKTI GATC 6 cut(s) 509, 522, 798, 834, 928, 1012
BstMAI GTCTC 3 cut(s) 162, 237, 937
BstMBI GATC 6 cut(s) 506, 519, 795, 831, 925, 1009
BstMWI GCNNNNNNNGC 2 cut(s) 409, 581
BstNI CCWGG 2 cut(s) 902, 1051
BstNSI RCATGY 1 cut(s) 166
BstSCI CCNGG 4 cut(s) 86, 109, 900, 1049
BstV1I GCAGC 1 cut(s) 613
BstV2I GAAGAC 1 cut(s) 342
BstX2I RGATCY 2 cut(s) 519, 831
BstYI RGATCY 2 cut(s) 519, 831
BstZ17I GTATAC 1 cut(s) 1187
BsuI GTATCC 2 cut(s) 766, 1137
BsuRI GGCC 5 cut(s) 109, 403, 900, 1054, 1124
BtgI CCRYGG 1 cut(s) 823
BtsCI GGATG 6 cut(s) 819, 958, 1207, 1216, 1312, 1332
BtsI GCAGTG 2 cut(s) 373, 417
BtsIMutI CAGTG 4 cut(s) 140, 373, 417, 1075
Cac8I GCNNGC 1 cut(s) 898
CaiI CAGNNNCTG 2 cut(s) 142, 656
CfoI GCGC 1 cut(s) 1197
Cfr10I RCCGGY 2 cut(s) 127, 187
Cfr13I GGNCC 5 cut(s) 4, 108, 181, 298, 1065
CseI GACGC 1 cut(s) 203
Csp6I GTAC 5 cut(s) 256, 292, 905, 1106, 1232
CviAII CATG 3 cut(s) 163, 824, 1043
CviQI GTAC 5 cut(s) 256, 292, 905, 1106, 1232
DdeI CTNAG 9 cut(s) 234, 281, 612, 704, 767, 781, 1056, 1061, 1206
DpnI GATC 6 cut(s) 508, 521, 797, 833, 927, 1011
DpnII GATC 6 cut(s) 506, 519, 795, 831, 925, 1009
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
Eam1104I CTCTTC 1 cut(s) 704
EarI CTCTTC 1 cut(s) 704
Ecl136II GAGCTC 1 cut(s) 1060
Eco130I CCWWGG 2 cut(s) 302, 823
Eco147I AGGCCT 1 cut(s) 1054
Eco24I GRGCYC 1 cut(s) 1062
Eco31I GGTCTC 2 cut(s) 162, 937
Eco47I GGWCC 4 cut(s) 4, 181, 298, 1065
Eco53kI GAGCTC 1 cut(s) 1060
Eco88I CYCGRG 2 cut(s) 68, 1112
EcoICRI GAGCTC 1 cut(s) 1060
EcoO109I RGGNCCY 1 cut(s) 298
EcoRII CCWGG 2 cut(s) 900, 1049
EcoT14I CCWWGG 2 cut(s) 302, 823
EcoT38I GRGCYC 1 cut(s) 1062
ErhI CCWWGG 2 cut(s) 302, 823
Esp3I CGTCTC 1 cut(s) 237
FaeI CATG 3 cut(s) 166, 827, 1046
FalI AAGNNNNNCTT 2 cut(s) 425, 457
FaqI GGGAC 2 cut(s) 311, 1095
FatI CATG 3 cut(s) 162, 823, 1042
FauI CCCGC 1 cut(s) 70
FauNDI CATATG 1 cut(s) 494
FblI GTMKAC 1 cut(s) 1186
Fnu4HI GCNGC 1 cut(s) 627
FokI GGATG 5 cut(s) 806, 965, 1214, 1223, 1319
FriOI GRGCYC 1 cut(s) 1062
Fsp4HI GCNGC 1 cut(s) 627
FspBI CTAG 2 cut(s) 527, 917
GlaI GCGC 1 cut(s) 1196
GluI GCNGC 1 cut(s) 627
GsuI CTGGAG 2 cut(s) 615, 1211
HaeIII GGCC 5 cut(s) 109, 403, 900, 1054, 1124
HapII CCGG 5 cut(s) 44, 88, 111, 128, 188
HgaI GACGC 1 cut(s) 203
HhaI GCGC 1 cut(s) 1197
Hin1II CATG 3 cut(s) 166, 827, 1046
Hin6I GCGC 1 cut(s) 1195
HinP1I GCGC 1 cut(s) 1195
HincII GTYRAC 3 cut(s) 430, 463, 934
HindII GTYRAC 3 cut(s) 430, 463, 934
HinfI GANTC 4 cut(s) 77, 226, 566, 608
HpaII CCGG 5 cut(s) 44, 88, 111, 128, 188
HphI GGTGA 3 cut(s) 142, 1004, 1093
Hpy166II GTNNAC 4 cut(s) 430, 463, 934, 1187
Hpy188I TCNGA 8 cut(s) 76, 237, 317, 565, 705, 768, 831, 1020
Hpy188III TCNNGA 8 cut(s) 169, 442, 605, 917, 940, 1007, 1112, 1208
Hpy8I GTNNAC 4 cut(s) 430, 463, 934, 1187
Hpy99I CGWCG 1 cut(s) 1185
HpyAV CCTTC 2 cut(s) 30, 616
HpyCH4III ACNGT 2 cut(s) 144, 1105
HpyCH4IV ACGT 4 cut(s) 930, 1108, 1183, 1223
HpyCH4V TGCA 4 cut(s) 53, 422, 853, 1228
HpyF10VI GCNNNNNNNGC 2 cut(s) 409, 581
HpyF3I CTNAG 9 cut(s) 234, 281, 612, 704, 767, 781, 1056, 1061, 1206
HpySE526I ACGT 4 cut(s) 930, 1108, 1183, 1223
Hsp92II CATG 3 cut(s) 166, 827, 1046
HspAI GCGC 1 cut(s) 1195
KflI GGGWCCC 1 cut(s) 298
KpnI GGTACC 1 cut(s) 908
Kzo9I GATC 6 cut(s) 506, 519, 795, 831, 925, 1009
LmnI GCTCC 5 cut(s) 202, 286, 634, 1192, 1258
Lsp1109I GCAGC 1 cut(s) 613
LweI GCATC 4 cut(s) 334, 431, 1192, 1290
MaeI CTAG 2 cut(s) 527, 917
MaeII ACGT 4 cut(s) 930, 1108, 1183, 1223
MaeIII GTNAC 6 cut(s) 130, 415, 532, 554, 605, 1045
MalI GATC 6 cut(s) 508, 521, 797, 833, 927, 1011
MbiI CCGCTC 1 cut(s) 65
MboI GATC 6 cut(s) 506, 519, 795, 831, 925, 1009
MboII GAAGA 8 cut(s) 347, 457, 721, 755, 1181, 1184, 1287, 1322
MfeI CAATTG 1 cut(s) 668
MflI RGATCY 2 cut(s) 519, 831
MhlI GDGCHC 1 cut(s) 1062
MluCI AATT 9 cut(s) 10, 25, 212, 249, 259, 318, 559, 668, 866
MlyI GAGTC 4 cut(s) 71, 220, 560, 602
MmeI TCCRAC 6 cut(s) 54, 54, 547, 809, 937, 1301
MroXI GAANNNNTTC 1 cut(s) 361
MseI TTAA 3 cut(s) 636, 848, 1002
MslI CAYNNNNRTG 3 cut(s) 378, 497, 596
MspI CCGG 5 cut(s) 44, 88, 111, 128, 188
MspR9I CCNGG 4 cut(s) 88, 111, 902, 1051
MunI CAATTG 1 cut(s) 668
Mva1269I GAATGC 1 cut(s) 759
MvaI CCWGG 2 cut(s) 902, 1051
MwoI GCNNNNNNNGC 2 cut(s) 409, 581
NciI CCSGG 2 cut(s) 88, 111
NcoI CCATGG 1 cut(s) 823
NdeI CATATG 1 cut(s) 494
NdeII GATC 6 cut(s) 506, 519, 795, 831, 925, 1009
NlaIII CATG 3 cut(s) 166, 827, 1046
NlaIV GGNNCC 7 cut(s) 6, 183, 299, 300, 358, 906, 1158
NmuCI GTSAC 4 cut(s) 130, 415, 554, 605
NspI RCATGY 1 cut(s) 166
PceI AGGCCT 1 cut(s) 1054
PciI ACATGT 1 cut(s) 162
PctI GAATGC 1 cut(s) 759
PdmI GAANNNNTTC 1 cut(s) 361
Pfl23II CGTACG 1 cut(s) 1105
PflFI GACNNNGTC 1 cut(s) 229
PkrI GCNGC 1 cut(s) 628
PleI GAGTC 4 cut(s) 71, 220, 560, 602
PpsI GAGTC 4 cut(s) 71, 220, 560, 602
PpuMI RGGWCCY 1 cut(s) 298
PscI ACATGT 1 cut(s) 162
Psp124BI GAGCTC 1 cut(s) 1062
Psp5II RGGWCCY 1 cut(s) 298
Psp6I CCWGG 2 cut(s) 900, 1049
PspGI CCWGG 2 cut(s) 900, 1049
PspLI CGTACG 1 cut(s) 1105
PspN4I GGNNCC 7 cut(s) 6, 183, 299, 300, 358, 906, 1158
PspPI GGNCC 5 cut(s) 4, 108, 181, 298, 1065
PspPPI RGGWCCY 1 cut(s) 298
PstNI CAGNNNCTG 2 cut(s) 142, 656
PsuI RGATCY 2 cut(s) 519, 831
PsyI GACNNNGTC 1 cut(s) 229
RsaI GTAC 5 cut(s) 257, 293, 906, 1107, 1233
RsaNI GTAC 5 cut(s) 256, 292, 905, 1106, 1232
RseI CAYNNNNRTG 3 cut(s) 378, 497, 596
SacI GAGCTC 1 cut(s) 1062
SaqAI TTAA 3 cut(s) 636, 848, 1002
SatI GCNGC 1 cut(s) 627
Sau3AI GATC 6 cut(s) 506, 519, 795, 831, 925, 1009
Sau96I GGNCC 5 cut(s) 4, 108, 181, 298, 1065
ScaI AGTACT 1 cut(s) 1233
SchI GAGTC 4 cut(s) 71, 220, 560, 602
ScrFI CCNGG 4 cut(s) 88, 111, 902, 1051
SduI GDGCHC 1 cut(s) 1062
SfaNI GCATC 4 cut(s) 334, 431, 1192, 1290
SgrAI CRCCGGYG 1 cut(s) 127
SinI GGWCC 4 cut(s) 4, 181, 298, 1065
SmiMI CAYNNNNRTG 3 cut(s) 378, 497, 596
SmlI CTYRAG 1 cut(s) 940
SmoI CTYRAG 1 cut(s) 940
Sse9I AATT 9 cut(s) 10, 25, 212, 249, 259, 318, 559, 668, 866
SseBI AGGCCT 1 cut(s) 1054
SsiI CCGC 2 cut(s) 63, 203
SspMI CTAG 2 cut(s) 527, 917
SstI GAGCTC 1 cut(s) 1062
StuI AGGCCT 1 cut(s) 1054
StyD4I CCNGG 4 cut(s) 86, 109, 900, 1049
StyI CCWWGG 2 cut(s) 302, 823
TaaI ACNGT 2 cut(s) 144, 1105
TaiI ACGT 4 cut(s) 933, 1111, 1186, 1226
TaqI TCGA 2 cut(s) 168, 924
TasI AATT 9 cut(s) 10, 25, 212, 249, 259, 318, 559, 668, 866
TatI WGTACW 3 cut(s) 255, 291, 1231
Tru1I TTAA 3 cut(s) 636, 848, 1002
Tru9I TTAA 3 cut(s) 636, 848, 1002
TscAI CASTG 4 cut(s) 147, 380, 424, 1075
TseFI GTSAC 4 cut(s) 130, 415, 554, 605
TseI GCWGC 1 cut(s) 626
Tsp45I GTSAC 4 cut(s) 130, 415, 554, 605
TspDTI ATGAA 2 cut(s) 580, 1323
TspGWI ACGGA 2 cut(s) 219, 1162
TspRI CASTG 4 cut(s) 147, 380, 424, 1075
Tth111I GACNNNGTC 1 cut(s) 229
VpaK11BI GGWCC 4 cut(s) 4, 181, 298, 1065
XapI RAATTY 1 cut(s) 10
XbaI TCTAGA 1 cut(s) 916
XceI RCATGY 1 cut(s) 166
XmiI GTMKAC 1 cut(s) 1186
XmnI GAANNNNTTC 1 cut(s) 361
XspI CTAG 2 cut(s) 527, 917
ZrmI AGTACT 1 cut(s) 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.