FvH4_2g25610

General transcription factor 3C polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0001600
Physical Location & Seq
Reverse (-)
20720010 .. 20722715
2706 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g25610.t1

Sequence Viewer

Length: 2544 bp
ATGGATAAAGAGGGCAATGCTAGTTGTGATCATGATGAAGGTCCAAAGTATGTGTTTGATTTGGGTGTTGAGGATGGCATTGTAGAAGATGAGAGAGAAGAAGAGGATGATGATTATGAAGAAGAATCAGAAGGAGACGATGCGGATGATGATGAAGAAGATGACACCTTTGATGTTATGGATTCTGTAGACGATGGTACTTTTGCAGACCAATATTACCCAGATTTTGTGGGGAAGGAGTATGAGACTTTAGCTAGGAAAAAAAGAAAACCACTTGGGGATAATCGTCCTAAAGGCTCAGTTAAGAAGGCCAGGAAAGATGATGGTTCTAAAGGAAGCTTAGAGGAGGAATTGATGGAGTTCATGATGGGCTGGCGGGGAAGGAGATCAAGGAAGACTAAGAAAAAAGGTAGAAGAAAAGGATCAAAGAACCAGTGCAGCCCTGAAATTAGTAGACTTCATAGTAAGGCTCGAAATTGCTATGCGTTTGGGGATTACAAAAAGGCCATACCCATCTTAAAAGAAGTAATTAAGCAAGCACCGCATTTGCCGGATGCTTATCAGACACTTGGAGATGTCCATAGTGCTCTTGGTGATAAATGTAGAGCCTTGAATTGCTACCATGTTGCTGCACAATTAGCACCCAAAAACCCATCTTTGTGGACACTGCTGTTCACAAAGTTCATGGAAGTAGGGAACATTTCTGGAGCTTCAAATAGCCTTTCAAGAGCAATATCAGCTGATCCTGAAGCTGAAAATGTGGTTGCTCTGAAGTTGGATCGTGCTTCACTCCATGTTCAGCTTAAAGATTTTGAAAAGGCTGCTGCTTTGTATGAAGAAATAGTCCAAACCTGTCCTGGTAATGTGAAGGCACTCAAGTCAGGAGCAGAGATGTATGCAAAATGCGGTCAGACTGAACACTCTATCCATATGCTGGAGGATTATCTCAGAGCTCATCCAACTGATGCTGACTTGAGTGTCATTGATTTGTTAGTTTCTCTGCTTATGGAAAATAATGCACATAATGAAGCTCTTCAGCATATTGAGCATGCACAACTGACACTCTATTCCGGAAAAGAGCCGCCTCTTGAGATCAAAGTTAAAGCAGGAATTTGCCATGCTAACCTTGGAAACATGCGCAAGGCAGCTAGTCTGTTCACTGAATTTGCAGCGGAATCTAGAGACGATGAAGCTATATCGCTGCTGTCTCCCCCGAGAAATCTAGATTGTGTTCCCCTCCCAACTTATAAAGCAAGATCATGGTGGCGTGATGGAAAAGTGAAGTTGAAGCTTTGCAGCATTTTCAGAGCTAAAGGGATGCACAAGGAACTTGTGGACGCAATCTATGATTTGGTACACGAGTCATTAAAGATTATATCACTTGGGAGAAGGGTGAAAAGGAAGCTTTTGAAAAAGGAATTGTTCCAAAGAATCAAAACCTTGGATGATCAGCAAACAGGTAACGTTTTTTCCAGAAATAGATCACGAGCACTTCCTTTATCAGATCATCGGAGAGTTAACAGAGAAAAGAAGCGACTTGAGGAAAAGGCAAAATTAAAGAAAGAAAAGAGAGCTGAGGCAATGGCTGCTGGACATGACGGACAAAGTGATGATTATTCAGATTCAGATGATGATCCTGAAATTGATCCACAAGAAATACTGAAAGGGCCTCCCCTGCCGGATCTAGTCAAGGAAAAAGATAATCATGACCTCATATTAGATTTGTGTAAGTCACTCACTTCCTTGAATAGACACTCTGAAGCATTGAAGATTATTAAGCTTGCTTTGAAATCAACTAAAGGCATGGCAGCTTTCCGGGGGGAACTTCGAACTCTTGGAGCTCAAATAGCTTACACAGCTCTGGATCCTGAGCAGGGGTTGAATTATGTAAAGTACATTGCAGACCAGAATCCGTACAGCAATGCTGTCTGGAATTGCTATTACAAAGTAATCTCCAGATTTAAGGAGGACTGGTATCGCGAGAAGCATTATAAATTTGTGCGCCACAGGCGCCATAGGCGCAACAGATTAAAAGACTGTGCACCACCCAGTATCATAACTGGCCATCATTATACTAGGAAAAGTCGCCATCAGGATGCTGCAAGAGAATACCTTGAAGCTTATAAGTTATTGCCAGAGAATCCCCTGGTTAATCTGTGTGCTGGTACTGCCTTAATCAACTTGGCCCATGGACATAGACTTCAGAACAAGCACCACTGTATTGCTCAGGGCTTTGCATTCCTCTACAACAATTTACGGGTTTGCAAAAGCAGCCAGGAGGCTATGTACAACATAGCCAGGGCATTCCATCAAGTTGGCCTTGTGACTCTTGCAGCTTCCTACTACGAAAAAGTTCTTGGCATTCATGTGAAAGACTACCCCATACCAAAACTTCCCCATGAGAATCCACACTCTAATCCAAATCAATCACCAGGTTACTGTGATCTTCGCAGAGAAGCAGCTTTTAATCTACATCTTATCTACAAACAGAGTGGATCGTTTGATCTAGCTCGACAAGTCTTGAGAGATCACTGCACTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_19 TPR_6 TPR_7 TPR_8

Protein Analysis

848

Amino Acids

96.35

Weight (kDa)

8.1

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_19 PF14559 162 - 224 1.5e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1248, 1992, 2124
AasI GACNNNNNNGTC 1 cut(s) 977
Acc16I TGCGCA 1 cut(s) 1139
AccB1I GGYRCC 1 cut(s) 2010
AccB7I CCANNNNNTGG 1 cut(s) 934
AccI GTMKAC 2 cut(s) 189, 454
AccII CGCG 1 cut(s) 1980
AccIII TCCGGA 1 cut(s) 1070
AciI CCGC 6 cut(s) 143, 376, 542, 906, 1082, 1172
AclI AACGTT 1 cut(s) 1464
AclWI GGATC 9 cut(s) 430, 737, 786, 1628, 1640, 1689, 1859, 1872, 2503
AcoI YGGCCR 1 cut(s) 2062
AcsI RAATTY 3 cut(s) 1110, 1163, 1994
AcuI CTGAAG 5 cut(s) 768, 791, 1019, 1779, 2186
AcyI GRCGYC 1 cut(s) 2011
AfaI GTAC 6 cut(s) 199, 1356, 1895, 1916, 2167, 2288
AfiI CCNNNNNNNGG 2 cut(s) 934, 1874
AjnI CCWGG 6 cut(s) 311, 856, 2145, 2274, 2297, 2431
AjuI GAANNNNNNNTTGG 2 cut(s) 2340, 2372
AloI GAACNNNNNNTCC 2 cut(s) 909, 941
Alw21I GWGCWC 5 cut(s) 589, 955, 1492, 1843, 2044
Alw26I GTCTC 4 cut(s) 129, 239, 1176, 1212
Alw44I GTGCAC 1 cut(s) 2040
AlwI GGATC 9 cut(s) 430, 737, 786, 1628, 1640, 1689, 1859, 1872, 2503
Ama87I CYCGRG 1 cut(s) 1213
Aor13HI TCCGGA 1 cut(s) 1070
AoxI GGCC 6 cut(s) 309, 504, 1667, 2062, 2184, 2317
ApaLI GTGCAC 1 cut(s) 2040
ApoI RAATTY 3 cut(s) 1110, 1163, 1994
Asp700I GAANNNNTTC 2 cut(s) 1032, 2352
AspLEI GCGC 4 cut(s) 1140, 2004, 2013, 2022
AspS9I GGNCC 3 cut(s) 41, 1667, 2185
AsuC2I CCSGG 1 cut(s) 1817
AsuHPI GGTGA 3 cut(s) 605, 1405, 2421
AsuII TTCGAA 1 cut(s) 1828
AvaI CYCGRG 1 cut(s) 1213
AvaII GGWCC 1 cut(s) 41
BaeGI GKGCMC 1 cut(s) 2044
BaeI ACNNNNGTAYC 2 cut(s) 1346, 1379
BalI TGGCCA 1 cut(s) 2064
BamHI GGATCC 1 cut(s) 1864
BanI GGYRCC 1 cut(s) 2010
BanII GRGCYC 2 cut(s) 955, 1843
BauI CACGAG 2 cut(s) 1358, 1485
BbsI GAAGAC 1 cut(s) 401
Bbv12I GWGCWC 5 cut(s) 589, 955, 1492, 1843, 2044
BbvCI CCTCAGC 1 cut(s) 1575
BciT130I CCWGG 6 cut(s) 313, 858, 2147, 2276, 2299, 2433
BclI TGATCA 2 cut(s) 28, 1447
BcnI CCSGG 1 cut(s) 1817
BcoDI GTCTC 4 cut(s) 129, 239, 1176, 1212
BfaI CTAG 8 cut(s) 21, 255, 1149, 1179, 1223, 1685, 2076, 2507
BfmI CTRYAG 1 cut(s) 186
BfoI RGCGCY 1 cut(s) 2014
Bme1390I CCNGG 7 cut(s) 313, 858, 1817, 2147, 2276, 2299, 2433
Bme18I GGWCC 1 cut(s) 41
BmeT110I CYCGRG 1 cut(s) 1213
BmgT120I GGNCC 3 cut(s) 41, 1667, 2185
BmiI GGNNCC 2 cut(s) 1866, 2012
BmrFI CCNGG 7 cut(s) 313, 858, 1817, 2147, 2276, 2299, 2433
BmrI ACTGGG 1 cut(s) 2043
BmsI GCATC 5 cut(s) 130, 544, 955, 1308, 2086
BmuI ACTGGG 1 cut(s) 2043
BpiI GAAGAC 1 cut(s) 401
BpmI CTGGAG 3 cut(s) 726, 956, 1939
Bpu10I CCTNAGC 3 cut(s) 1575, 1869, 2226
Bpu14I TTCGAA 1 cut(s) 1828
BpuEI CTTGAG 5 cut(s) 860, 994, 1109, 1559, 2542
BpuMI CCSGG 1 cut(s) 1817
BsaBI GATNNNNATC 2 cut(s) 558, 1632
BsaHI GRCGYC 1 cut(s) 2011
BsaJI CCNNGG 6 cut(s) 1126, 1440, 1816, 2145, 2188, 2298
BsaWI WCCGGW 1 cut(s) 1070
BsaXI ACNNNNNCTCC 4 cut(s) 1958, 1988, 2270, 2300
Bsc4I CCNNNNNNNGG 2 cut(s) 934, 1874
Bse1I ACTGG 4 cut(s) 433, 1976, 2049, 2065
Bse3DI GCAATG 4 cut(s) 22, 1587, 1896, 1927
Bse8I GATNNNNATC 2 cut(s) 558, 1632
BseAI TCCGGA 1 cut(s) 1070
BseBI CCWGG 6 cut(s) 313, 858, 2147, 2276, 2299, 2433
BseDI CCNNGG 6 cut(s) 1126, 1440, 1816, 2145, 2188, 2298
BseGI GGATG 8 cut(s) 79, 112, 151, 559, 955, 1323, 1450, 2101
BseJI GATNNNNATC 2 cut(s) 558, 1632
BseLI CCNNNNNNNGG 2 cut(s) 934, 1874
BseMI GCAATG 4 cut(s) 22, 1587, 1896, 1927
BseMII CTCAG 5 cut(s) 312, 961, 1566, 1860, 2240
BseNI ACTGG 4 cut(s) 433, 1976, 2049, 2065
BseRI GAGGAG 1 cut(s) 359
BseSI GKGCMC 1 cut(s) 2044
BsgI GTGCAG 3 cut(s) 457, 615, 2518
Bsh1236I CGCG 1 cut(s) 1980
BshFI GGCC 6 cut(s) 311, 506, 1669, 2064, 2186, 2319
BshNI GGYRCC 1 cut(s) 2010
BsiHKAI GWGCWC 5 cut(s) 589, 955, 1492, 1843, 2044
BsiHKCI CYCGRG 1 cut(s) 1213
BsiSI CCGG 4 cut(s) 551, 1071, 1679, 1816
BslI CCNNNNNNNGG 2 cut(s) 934, 1874
BsmAI GTCTC 4 cut(s) 129, 239, 1176, 1212
BsmBI CGTCTC 2 cut(s) 129, 1176
BsmI GAATGC 3 cut(s) 2237, 2303, 2361
BsnI GGCC 6 cut(s) 311, 506, 1669, 2064, 2186, 2319
BsoBI CYCGRG 1 cut(s) 1213
Bsp119I TTCGAA 1 cut(s) 1828
Bsp1286I GDGCHC 5 cut(s) 589, 955, 1492, 1843, 2044
Bsp13I TCCGGA 1 cut(s) 1070
Bsp1407I TGTACA 1 cut(s) 2286
Bsp19I CCATGG 1 cut(s) 2188
Bsp68I TCGCGA 1 cut(s) 1980
BspACI CCGC 6 cut(s) 143, 376, 542, 906, 1082, 1172
BspANI GGCC 6 cut(s) 311, 506, 1669, 2064, 2186, 2319
BspCNI CTCAG 5 cut(s) 311, 960, 1567, 1861, 2239
BspEI TCCGGA 1 cut(s) 1070
BspFNI CGCG 1 cut(s) 1980
BspHI TCATGA 3 cut(s) 31, 363, 1705
BspLI GGNNCC 2 cut(s) 1866, 2012
BspPI GGATC 9 cut(s) 430, 737, 786, 1628, 1640, 1689, 1859, 1872, 2503
BspQI GCTCTTC 1 cut(s) 1038
BspT104I TTCGAA 1 cut(s) 1828
BspT107I GGYRCC 1 cut(s) 2010
BsrDI GCAATG 4 cut(s) 22, 1587, 1896, 1927
BsrGI TGTACA 1 cut(s) 2286
BsrI ACTGG 4 cut(s) 433, 1976, 2049, 2065
BssECI CCNNGG 6 cut(s) 1126, 1440, 1816, 2145, 2188, 2298
BssNI GRCGYC 1 cut(s) 2011
BssSI CACGAG 2 cut(s) 1358, 1485
BssT1I CCWWGG 3 cut(s) 1126, 1440, 2188
Bst2BI CACGAG 2 cut(s) 1358, 1485
Bst2UI CCWGG 6 cut(s) 313, 858, 2147, 2276, 2299, 2433
Bst4CI ACNGT 3 cut(s) 2039, 2219, 2441
Bst6I CTCTTC 2 cut(s) 96, 1038
BstACI GRCGYC 1 cut(s) 2011
BstAPI GCANNNNNTGC 1 cut(s) 1586
BstAUI TGTACA 1 cut(s) 2286
BstBI TTCGAA 1 cut(s) 1828
BstC8I GCNNGC 4 cut(s) 374, 537, 1050, 1782
BstDEI CTNAG 7 cut(s) 298, 340, 399, 947, 1575, 1869, 2226
BstDSI CCRYGG 1 cut(s) 2188
BstF5I GGATG 8 cut(s) 79, 112, 151, 559, 955, 1323, 1450, 2101
BstFNI CGCG 1 cut(s) 1980
BstH2I RGCGCY 1 cut(s) 2014
BstHHI GCGC 4 cut(s) 1140, 2004, 2013, 2022
BstMAI GTCTC 4 cut(s) 129, 239, 1176, 1212
BstNI CCWGG 6 cut(s) 313, 858, 2147, 2276, 2299, 2433
BstNSI RCATGY 2 cut(s) 1052, 1138
BstSCI CCNGG 7 cut(s) 311, 856, 1815, 2145, 2274, 2297, 2431
BstSFI CTRYAG 1 cut(s) 186
BstSLI GKGCMC 1 cut(s) 2044
BstUI CGCG 1 cut(s) 1980
BstV2I GAAGAC 1 cut(s) 401
BstX2I RGATCY 2 cut(s) 1681, 1864
BstXI CCANNNNNNTGG 2 cut(s) 660, 2315
BstYI RGATCY 2 cut(s) 1681, 1864
BsuRI GGCC 6 cut(s) 311, 506, 1669, 2064, 2186, 2319
BtgI CCRYGG 1 cut(s) 2188
BtsCI GGATG 8 cut(s) 79, 112, 151, 559, 955, 1323, 1450, 2101
BtsI GCAGTG 2 cut(s) 665, 2530
BtsIMutI CAGTG 5 cut(s) 440, 665, 1158, 2215, 2530
BtuMI TCGCGA 1 cut(s) 1980
Cac8I GCNNGC 4 cut(s) 374, 537, 1050, 1782
CciI TCATGA 3 cut(s) 31, 363, 1705
CfoI GCGC 4 cut(s) 1140, 2004, 2013, 2022
Cfr13I GGNCC 3 cut(s) 41, 1667, 2185
CseI GACGC 1 cut(s) 1346
CsiI ACCWGGT 1 cut(s) 2431
Csp6I GTAC 6 cut(s) 198, 1355, 1894, 1915, 2166, 2287
CspCI CAANNNNNGTGG 2 cut(s) 2473, 2508
CviQI GTAC 6 cut(s) 198, 1355, 1894, 1915, 2166, 2287
DdeI CTNAG 7 cut(s) 298, 340, 399, 947, 1575, 1869, 2226
DinI GGCGCC 1 cut(s) 2012
DrdI GACNNNNNNGTC 1 cut(s) 977
DseDI GACNNNNNNGTC 1 cut(s) 977
EaeI YGGCCR 1 cut(s) 2062
Eam1104I CTCTTC 2 cut(s) 96, 1038
EarI CTCTTC 2 cut(s) 96, 1038
Ecl136II GAGCTC 2 cut(s) 953, 1841
Eco130I CCWWGG 3 cut(s) 1126, 1440, 2188
Eco24I GRGCYC 2 cut(s) 955, 1843
Eco47I GGWCC 1 cut(s) 41
Eco53kI GAGCTC 2 cut(s) 953, 1841
Eco57I CTGAAG 5 cut(s) 768, 791, 1019, 1779, 2186
Eco88I CYCGRG 1 cut(s) 1213
EcoICRI GAGCTC 2 cut(s) 953, 1841
EcoO109I RGGNCCY 1 cut(s) 1667
EcoRII CCWGG 6 cut(s) 311, 856, 2145, 2274, 2297, 2431
EcoT14I CCWWGG 3 cut(s) 1126, 1440, 2188
EcoT38I GRGCYC 2 cut(s) 955, 1843
EgeI GGCGCC 1 cut(s) 2012
EheI GGCGCC 1 cut(s) 2012
ErhI CCWWGG 3 cut(s) 1126, 1440, 2188
Esp3I CGTCTC 2 cut(s) 129, 1176
FalI AAGNNNNNCTT 2 cut(s) 2304, 2336
FauI CCCGC 1 cut(s) 369
FauNDI CATATG 1 cut(s) 930
FbaI TGATCA 2 cut(s) 28, 1447
FblI GTMKAC 2 cut(s) 189, 454
FokI GGATG 8 cut(s) 86, 119, 158, 566, 942, 1330, 1457, 2108
FriOI GRGCYC 2 cut(s) 955, 1843
FspBI CTAG 8 cut(s) 21, 255, 1149, 1179, 1223, 1685, 2076, 2507
FspI TGCGCA 1 cut(s) 1139
GlaI GCGC 4 cut(s) 1139, 2003, 2012, 2021
GsuI CTGGAG 3 cut(s) 726, 956, 1939
HaeII RGCGCY 1 cut(s) 2014
HaeIII GGCC 6 cut(s) 311, 506, 1669, 2064, 2186, 2319
HapII CCGG 4 cut(s) 551, 1071, 1679, 1816
HgaI GACGC 1 cut(s) 1346
HhaI GCGC 4 cut(s) 1140, 2004, 2013, 2022
Hin1I GRCGYC 1 cut(s) 2011
Hin6I GCGC 4 cut(s) 1138, 2002, 2011, 2020
HinP1I GCGC 4 cut(s) 1138, 2002, 2011, 2020
HincII GTYRAC 1 cut(s) 1519
HindII GTYRAC 1 cut(s) 1519
HindIII AAGCTT 5 cut(s) 337, 1289, 1403, 1778, 2118
HpaI GTTAAC 1 cut(s) 1519
HpaII CCGG 4 cut(s) 551, 1071, 1679, 1816
HphI GGTGA 3 cut(s) 605, 1405, 2421
Hpy166II GTNNAC 9 cut(s) 190, 455, 663, 675, 1158, 1336, 1357, 1519, 2042
Hpy8I GTNNAC 9 cut(s) 190, 455, 663, 675, 1158, 1336, 1357, 1519, 2042
HpyAV CCTTC 7 cut(s) 32, 125, 229, 301, 375, 862, 1383
HpyCH4III ACNGT 3 cut(s) 2039, 2219, 2441
HpyCH4IV ACGT 1 cut(s) 1464
HpyF3I CTNAG 7 cut(s) 298, 340, 399, 947, 1575, 1869, 2226
HpySE526I ACGT 1 cut(s) 1464
Hsp92I GRCGYC 1 cut(s) 2011
HspAI GCGC 4 cut(s) 1138, 2002, 2011, 2020
KasI GGCGCC 1 cut(s) 2010
Kpn2I TCCGGA 1 cut(s) 1070
Ksp22I TGATCA 2 cut(s) 28, 1447
KspAI GTTAAC 1 cut(s) 1519
LguI GCTCTTC 1 cut(s) 1038
LmnI GCTCC 3 cut(s) 707, 884, 1838
LweI GCATC 5 cut(s) 130, 544, 955, 1308, 2086
MabI ACCWGGT 1 cut(s) 2431
MaeI CTAG 8 cut(s) 21, 255, 1149, 1179, 1223, 1685, 2076, 2507
MaeII ACGT 1 cut(s) 1464
MaeIII GTNAC 4 cut(s) 1460, 1731, 2323, 2435
MflI RGATCY 2 cut(s) 1681, 1864
MhlI GDGCHC 5 cut(s) 589, 955, 1492, 1843, 2044
MlsI TGGCCA 1 cut(s) 2064
MluNI TGGCCA 1 cut(s) 2064
Mly113I GGCGCC 1 cut(s) 2011
MlyI GAGTC 2 cut(s) 1370, 2320
MmeI TCCRAC 2 cut(s) 756, 983
Mox20I TGGCCA 1 cut(s) 2064
MroI TCCGGA 1 cut(s) 1070
MroXI GAANNNNTTC 2 cut(s) 1032, 2352
MscI TGGCCA 1 cut(s) 2064
MslI CAYNNNNRTG 3 cut(s) 658, 2094, 2366
Msp20I TGGCCA 1 cut(s) 2064
MspA1I CMGCKG 2 cut(s) 740, 1172
MspI CCGG 4 cut(s) 551, 1071, 1679, 1816
MspR9I CCNGG 7 cut(s) 313, 858, 1817, 2147, 2276, 2299, 2433
Mva1269I GAATGC 3 cut(s) 2237, 2303, 2361
MvaI CCWGG 6 cut(s) 313, 858, 2147, 2276, 2299, 2433
MvnI CGCG 1 cut(s) 1980
NarI GGCGCC 1 cut(s) 2011
NciI CCSGG 1 cut(s) 1817
NcoI CCATGG 1 cut(s) 2188
NdeI CATATG 1 cut(s) 930
NlaIV GGNNCC 2 cut(s) 1866, 2012
NmuCI GTSAC 2 cut(s) 1731, 2323
NruI TCGCGA 1 cut(s) 1980
NsbI TGCGCA 1 cut(s) 1139
NspI RCATGY 2 cut(s) 1052, 1138
NspV TTCGAA 1 cut(s) 1828
PaeI GCATGC 1 cut(s) 1052
PagI TCATGA 3 cut(s) 31, 363, 1705
PciSI GCTCTTC 1 cut(s) 1038
PctI GAATGC 3 cut(s) 2237, 2303, 2361
PdmI GAANNNNTTC 2 cut(s) 1032, 2352
PfeI GAWTC 8 cut(s) 125, 182, 1175, 1431, 1622, 1909, 2140, 2404
PflMI CCANNNNNTGG 1 cut(s) 934
PleI GAGTC 2 cut(s) 1369, 2320
PluTI GGCGCC 1 cut(s) 2014
PpsI GAGTC 2 cut(s) 1369, 2320
PsiI TTATAA 3 cut(s) 1248, 1992, 2124
Psp124BI GAGCTC 2 cut(s) 955, 1843
Psp1406I AACGTT 1 cut(s) 1464
Psp6I CCWGG 6 cut(s) 311, 856, 2145, 2274, 2297, 2431
PspGI CCWGG 6 cut(s) 311, 856, 2145, 2274, 2297, 2431
PspN4I GGNNCC 2 cut(s) 1866, 2012
PspPI GGNCC 3 cut(s) 41, 1667, 2185
PsuI RGATCY 2 cut(s) 1681, 1864
PvuII CAGCTG 1 cut(s) 740
RruI TCGCGA 1 cut(s) 1980
RsaI GTAC 6 cut(s) 199, 1356, 1895, 1916, 2167, 2288
RsaNI GTAC 6 cut(s) 198, 1355, 1894, 1915, 2166, 2287
RseI CAYNNNNRTG 3 cut(s) 658, 2094, 2366
SacI GAGCTC 2 cut(s) 955, 1843
SapI GCTCTTC 1 cut(s) 1038
Sau96I GGNCC 3 cut(s) 41, 1667, 2185
SchI GAGTC 2 cut(s) 1370, 2320
ScrFI CCNGG 7 cut(s) 313, 858, 1817, 2147, 2276, 2299, 2433
SduI GDGCHC 5 cut(s) 589, 955, 1492, 1843, 2044
SexAI ACCWGGT 1 cut(s) 2431
SfaNI GCATC 5 cut(s) 130, 544, 955, 1308, 2086
SfcI CTRYAG 1 cut(s) 186
SfoI GGCGCC 1 cut(s) 2012
SfuI TTCGAA 1 cut(s) 1828
SinI GGWCC 1 cut(s) 41
SmiMI CAYNNNNRTG 3 cut(s) 658, 2094, 2366
SmlI CTYRAG 5 cut(s) 875, 973, 1088, 1538, 2521
SmoI CTYRAG 5 cut(s) 875, 973, 1088, 1538, 2521
SphI GCATGC 1 cut(s) 1052
SsiI CCGC 6 cut(s) 143, 376, 542, 906, 1082, 1172
SspDI GGCGCC 1 cut(s) 2010
SspI AATATT 1 cut(s) 215
SspMI CTAG 8 cut(s) 21, 255, 1149, 1179, 1223, 1685, 2076, 2507
SstI GAGCTC 2 cut(s) 955, 1843
StyD4I CCNGG 7 cut(s) 311, 856, 1815, 2145, 2274, 2297, 2431
StyI CCWWGG 3 cut(s) 1126, 1440, 2188
TaaI ACNGT 3 cut(s) 2039, 2219, 2441
TaiI ACGT 1 cut(s) 1467
TaqI TCGA 3 cut(s) 472, 1828, 2512
TatI WGTACW 2 cut(s) 1893, 2286
TauI GCSGC 1 cut(s) 1084
TfiI GAWTC 8 cut(s) 125, 182, 1175, 1431, 1622, 1909, 2140, 2404
TscAI CASTG 5 cut(s) 440, 672, 1165, 2222, 2537
TseFI GTSAC 2 cut(s) 1731, 2323
Tsp45I GTSAC 2 cut(s) 1731, 2323
TspGWI ACGGA 2 cut(s) 1614, 1902
TspRI CASTG 5 cut(s) 440, 672, 1165, 2222, 2537
Van91I CCANNNNNTGG 1 cut(s) 934
VneI GTGCAC 1 cut(s) 2040
VpaK11BI GGWCC 1 cut(s) 41
XapI RAATTY 3 cut(s) 1110, 1163, 1994
XbaI TCTAGA 2 cut(s) 1178, 1222
XceI RCATGY 2 cut(s) 1052, 1138
XcmI CCANNNNNNNNNTGG 3 cut(s) 587, 854, 1124
XmiI GTMKAC 2 cut(s) 189, 454
XmnI GAANNNNTTC 2 cut(s) 1032, 2352
XspI CTAG 8 cut(s) 21, 255, 1149, 1179, 1223, 1685, 2076, 2507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.