Rorug02G0424300

General transcription factor 3C polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001600
Physical Location & Seq
Forward (+)
54576766 .. 54583273
6508 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0424300.1

Sequence Viewer

Length: 2526 bp
ATGGGTTTGAGGCTTGTAATGTGGAATGTGGTAGCCCTGCTGGTGCTCTTGTGTTCTTGTTTCTCTTCTGTTAAAGCCTCTGTTTATTATGATTCCAAGTCTATTGTCATCAATGGCCAGAGGAGGATCCTCATTTCTGGATCTATTCACTACCCAAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAAGCCAAGAAAGGAGGCTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGGCATGAACCTTCACCTGGCAAATACTATTTTGGGGACAACTATGATCTGGTCAAATTTATCAAGCTGGTACAGCAGGCAGGCCTTTATGTTCATCTCAGGATTGGTCCTTATGTTTGTGCTGAGTGGAACTTTGGGGGGTTTCCTGTTTGGCTGAAGTACATTCCTGGTATCCAATTCAGAACAGATAATGGACCTTTCAAGGATCAAATGCAAAGATTCACTACAAAGATTGTAAACATGATGAAAGCAGAAAGGTTGTTCGAGTCTCACGGTGGTCCAATCATTCTATCCCAGATTGAAAATGAGTATGGACCCATGGAATACGAAATTGGTGCACCAGGTAAAGCCTACACTGACTGGGCAGCTCAAATGGCTGTGGGACTAAACACTGGTGTCCCCTGGGTCATGTGCAAACAAGATGATGCCCCTGATCCTGTTATTAACGCTTGCAATGGCTTCTATTGTGACTACTTCTCTCCAAACAAGGCTTATAAACCAAAGATGTGGACTGAAGCCTGGACTGGATGGTTTACTGAGTTTGGAGGTGCAGTTCCTTACCGACCAGCTGAGGATTTGGCATTTTCAGTTGCGAAGTTTATACAAAAGGGTGGATCATTCATTAACTATTATATGTACCATGGAGGAACAAATTTTGGGCGAACTGCTGGTGGTCCTTTCATCGCTACTAGTTATGATTACGATGCTCCTCTGGATGAATATGGACTGTTGAGGCAACCTAAATGGGGCCATTTGAAAGATTTGCATAGAGCAATAAAGTTGTGCGAACCAGCTCTAGTTTCTAGTGATCCTACTGTAACACCACTTGGACGTTATCAAGAGGCTCATGTATTCAAATCAAATTCTGGAGCTTGTGCCGCATTTCTTGCAAATTACAACCAAAGATCATTTGCAAAAGTGGCATTTGGGAACATGCATTACAACCTGCCTCCTTGGTCTATTAGCATTCTTCCTGACTGCAAGAACACAGTTTATAATACTGCAAGGATTGGTGCGCAAAGTGCACGGATGAAGATGCCCCGTGTTCCTATTCATGGAGGATTCTCTTGGCAGGCTTACAATGACGAAAGTGCCACGTATAGTGACACTTCATTTACCACAGCCGGATTATTGGAGCAGATAAATACCACTAGAGATGCCACTGATTATTTGTGGTACATGACAGATGTTGAGATTGATCCCAATGAGTACTTTTTAAGAAGTGGAAATTATCCTGTACTCACAGTCTTATCAGCTGGTCATGCTTTGCGTGTTTTCATCAACGGTCAACTTGCAGGAACTGCTTATGGAAGTTTAGAAACCCCAAAACTAACATTTAATCAAGGTGTGAATTTGAGAGCTGGTAGCAACCAAATTGCTCTTCTCAGCATTGCTGTTGGTCTGCCGAACGTTGGGCCACATTTTGAGACATGGAATGCTGGCATTCTTGGCCCAGTCATATTAAATGGTCTTAATGAGGGAAGGAGGGACTTGTCATGGCAGAAATGGTCTTATAAGATTGGGCTTAAAGGAGAAGCTTTGAGTCTTCATTCGCTGAGTGGGAGTTCCTCAGTAGAGTGGACTCAGGGGTCTTTTGTGGCACAAAGGCAGCCTCTTACATGGTACAAAACGACTTTCAATAGACCAGCTGGAAATTCGCCATTGGCTTTAGATATGGGCAGCATGGGCAAAGGCCAAGTATGGATAAATGGCCAGAGTATTGGCCGTTATTGGCCTGCTTATAAAGCATCTGGTACTTGTGGCGAATGTAACTACGCCGGAACATTTAGTGAGAAGAAATGCTTAAGTAACTGTGGGGAGGCTTCCCAGAGATGGTATCATGTTCCTCGTTCATGGCTGAACCCAGCAGGCAATTTGTTGGTTGTGTTAGAAGAGTGGGGTGGCGATCCAAATGGGATATTTTTGGTCAGAAGGGAAGTAGATAGTATATGTGCTGATATTTATGAGTGGCAACCAAATCTTATGAGTTGGCAGATGCAAGTCTCAGGAAGGGTCAATAAACCTCTAAGGCCTAAAGCTCATTTGTCATGTGGCCCTGGGCAGAAAATCTCATCAATAAAGTTTGCTAGCTTCGGAACGCCAGTAGGGGTTTGTGGAAGCTTCCGGGAAGGGGGCTGTCATGCTCACAAGTCTTATGATGCTTTTCAAAGGAGTTGCATTGGACAGAACTCATGCTCAGTTACTGTATCACCTGAGAATTTTGGAGGGGATCCATGTCCAAATGTCATGAAGAAACTCTCTGTGGAGGCCATTTGCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_19 TPR_6 TPR_7 TPR_8

Protein Analysis

841

Amino Acids

93.37

Weight (kDa)

8.59

Isoelectric Point (pI)

37.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 34 - 339 2.3e-121 Glycosyl hydrolases family 35
GHD PF17834 362 - 418 7.3e-23 Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd PF21467 471 - 538 1.2e-06 Beta-galactosidase, galactose-binding domain
BetaGal_gal-bd PF21467 620 - 706 4.1e-26 Beta-galactosidase, galactose-binding domain
SUEL_Lectin PF02140 763 - 840 1.1e-21 D-galactoside/L-rhamnose binding SUEL lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 738, 1239, 1758, 1986
AasI GACNNNNNNGTC 1 cut(s) 1831
Acc16I TGCGCA 1 cut(s) 1260
Acc36I ACCTGC 1 cut(s) 1197
AciI CCGC 1 cut(s) 1122
AclI AACGTT 1 cut(s) 1653
AcoI YGGCCR 4 cut(s) 115, 176, 1954, 1966
AcsI RAATTY 6 cut(s) 299, 895, 1105, 1594, 1897, 2461
AcuI CTGAAG 2 cut(s) 419, 777
AfaI GTAC 8 cut(s) 315, 404, 881, 1421, 1454, 1482, 1868, 1999
AfiI CCNNNNNNNGG 6 cut(s) 260, 989, 1298, 1655, 2076, 2374
AflII CTTAAG 1 cut(s) 2047
AgsI TTSAA 6 cut(s) 445, 545, 1000, 1099, 1882, 2411
AhlI ACTAGT 1 cut(s) 932
AjnI CCWGG 6 cut(s) 259, 409, 583, 644, 761, 2299
AjuI GAANNNNNNNTTGG 6 cut(s) 194, 226, 558, 590, 1608, 1640
AloI GAACNNNNNNTCC 2 cut(s) 780, 812
Alw21I GWGCWC 3 cut(s) 48, 583, 1270
Alw26I GTCTC 3 cut(s) 516, 1664, 2251
Alw44I GTGCAC 2 cut(s) 579, 1266
AlwNI CAGNNNCTG 2 cut(s) 1544, 2447
ApaLI GTGCAC 2 cut(s) 579, 1266
ApeKI GCWGC 4 cut(s) 608, 1852, 1923, 2520
ApoI RAATTY 6 cut(s) 299, 895, 1105, 1594, 1897, 2461
AspLEI GCGC 1 cut(s) 1261
AspS9I GGNCC 9 cut(s) 350, 437, 521, 557, 917, 991, 1658, 1694, 2297
AsuC2I CCSGG 1 cut(s) 2369
AsuHPI GGTGA 2 cut(s) 249, 2445
AsuNHI GCTAGC 1 cut(s) 2330
AvaII GGWCC 5 cut(s) 350, 437, 521, 557, 917
BaeGI GKGCMC 2 cut(s) 583, 1270
BalI TGGCCA 3 cut(s) 117, 178, 1956
BamHI GGATCC 2 cut(s) 126, 2473
BbsI GAAGAC 1 cut(s) 1781
Bbv12I GWGCWC 3 cut(s) 48, 583, 1270
BbvCI CCTCAGC 1 cut(s) 813
BbvI GCAGC 3 cut(s) 620, 1864, 1935
BccI CCATC 2 cut(s) 765, 2070
BceAI ACGGC 1 cut(s) 1953
BcgI CGANNNNNNTGC 2 cut(s) 560, 594
BciT130I CCWGG 6 cut(s) 261, 411, 585, 646, 763, 2301
BciVI GTATCC 1 cut(s) 425
BcnI CCSGG 1 cut(s) 2369
BcoDI GTCTC 3 cut(s) 516, 1664, 2251
BcuI ACTAGT 1 cut(s) 932
BfaI CTAG 5 cut(s) 933, 1040, 1047, 1395, 2331
BfrI CTTAAG 1 cut(s) 2047
BfuAI ACCTGC 1 cut(s) 1197
BfuI GTATCC 1 cut(s) 425
BglII AGATCT 1 cut(s) 181
BisI GCNGC 5 cut(s) 609, 1122, 1853, 1924, 2521
BlsI GCNGC 5 cut(s) 610, 1123, 1854, 1925, 2522
BmcAI AGTACT 1 cut(s) 1454
Bme1390I CCNGG 7 cut(s) 261, 411, 585, 646, 763, 2301, 2369
Bme18I GGWCC 5 cut(s) 350, 437, 521, 557, 917
BmgT120I GGNCC 9 cut(s) 350, 437, 521, 557, 917, 991, 1658, 1694, 2297
BmiI GGNNCC 4 cut(s) 128, 559, 992, 2475
BmrFI CCNGG 7 cut(s) 261, 411, 585, 646, 763, 2301, 2369
BmrI ACTGGG 2 cut(s) 613, 1691
BmsI GCATC 7 cut(s) 658, 937, 1269, 1390, 2000, 2229, 2392
BmtI GCTAGC 1 cut(s) 2334
BmuI ACTGGG 2 cut(s) 613, 1691
BpiI GAAGAC 1 cut(s) 1781
BpmI CTGGAG 1 cut(s) 1131
Bpu10I CCTNAGC 1 cut(s) 813
BpuMI CCSGG 1 cut(s) 2369
BsaAI YACGTR 1 cut(s) 1341
BsaJI CCNNGG 7 cut(s) 561, 644, 645, 883, 1196, 2299, 2300
BsaXI ACNNNNNCTCC 2 cut(s) 780, 810
Bsc4I CCNNNNNNNGG 6 cut(s) 260, 989, 1298, 1655, 2076, 2374
Bse1I ACTGG 5 cut(s) 608, 640, 772, 1697, 2345
Bse3DI GCAATG 2 cut(s) 703, 1632
BseBI CCWGG 6 cut(s) 261, 411, 585, 646, 763, 2301
BseDI CCNNGG 7 cut(s) 561, 644, 645, 883, 1196, 2299, 2300
BseGI GGATG 4 cut(s) 220, 776, 964, 1278
BseLI CCNNNNNNNGG 6 cut(s) 260, 989, 1298, 1655, 2076, 2374
BseMI GCAATG 2 cut(s) 703, 1632
BseNI ACTGG 5 cut(s) 608, 640, 772, 1697, 2345
BseRI GAGGAG 2 cut(s) 136, 942
BseSI GKGCMC 2 cut(s) 583, 1270
BseXI GCAGC 3 cut(s) 620, 1864, 1935
BseYI CCCAGC 1 cut(s) 2107
BsgI GTGCAG 1 cut(s) 813
BsiHKAI GWGCWC 3 cut(s) 48, 583, 1270
BsiSI CCGG 3 cut(s) 1368, 2022, 2368
BslFI GGGAC 4 cut(s) 293, 626, 639, 1745
BslI CCNNNNNNNGG 6 cut(s) 260, 989, 1298, 1655, 2076, 2374
BsmAI GTCTC 3 cut(s) 516, 1664, 2251
BsmFI GGGAC 4 cut(s) 293, 626, 639, 1745
BsmI GAATGC 3 cut(s) 1209, 1684, 1686
Bsp1286I GDGCHC 3 cut(s) 48, 583, 1270
Bsp19I CCATGG 2 cut(s) 561, 883
BspACI CCGC 1 cut(s) 1122
BspHI TCATGA 1 cut(s) 2490
BspLI GGNNCC 4 cut(s) 128, 559, 992, 2475
BspMI ACCTGC 1 cut(s) 1197
BspOI GCTAGC 1 cut(s) 2334
BspQI GCTCTTC 1 cut(s) 1629
BspTI CTTAAG 1 cut(s) 2047
BsrDI GCAATG 2 cut(s) 703, 1632
BsrI ACTGG 5 cut(s) 608, 640, 772, 1697, 2345
BssECI CCNNGG 7 cut(s) 561, 644, 645, 883, 1196, 2299, 2300
BssT1I CCWWGG 3 cut(s) 561, 883, 1196
Bst2UI CCWGG 6 cut(s) 261, 411, 585, 646, 763, 2301
Bst4CI ACNGT 8 cut(s) 518, 972, 1060, 1234, 1489, 1529, 2057, 2449
Bst6I CTCTTC 3 cut(s) 70, 1629, 2130
BstAFI CTTAAG 1 cut(s) 2047
BstAPI GCANNNNNTGC 2 cut(s) 1130, 1544
BstBAI YACGTR 1 cut(s) 1341
BstC8I GCNNGC 8 cut(s) 321, 325, 694, 1317, 1684, 1980, 2113, 2332
BstDSI CCRYGG 2 cut(s) 561, 883
BstF5I GGATG 4 cut(s) 220, 776, 964, 1278
BstHHI GCGC 1 cut(s) 1261
BstMAI GTCTC 3 cut(s) 516, 1664, 2251
BstNI CCWGG 6 cut(s) 261, 411, 585, 646, 763, 2301
BstNSI RCATGY 1 cut(s) 1180
BstSCI CCNGG 7 cut(s) 259, 409, 583, 644, 761, 2299, 2367
BstSLI GKGCMC 2 cut(s) 583, 1270
BstV1I GCAGC 3 cut(s) 620, 1864, 1935
BstV2I GAAGAC 1 cut(s) 1781
BstX2I RGATCY 4 cut(s) 126, 140, 181, 2473
BstXI CCANNNNNNTGG 2 cut(s) 750, 1964
BstYI RGATCY 4 cut(s) 126, 140, 181, 2473
BsuI GTATCC 1 cut(s) 425
BtgI CCRYGG 2 cut(s) 561, 883
BtgZI GCGATG 1 cut(s) 910
BtsCI GGATG 4 cut(s) 220, 776, 964, 1278
BtsIMutI CAGTG 3 cut(s) 597, 633, 1404
BveI ACCTGC 1 cut(s) 1197
Cac8I GCNNGC 8 cut(s) 321, 325, 694, 1317, 1684, 1980, 2113, 2332
CaiI CAGNNNCTG 2 cut(s) 1544, 2447
CciI TCATGA 1 cut(s) 2490
CfoI GCGC 1 cut(s) 1261
Cfr13I GGNCC 9 cut(s) 350, 437, 521, 557, 917, 991, 1658, 1694, 2297
CsiI ACCWGGT 1 cut(s) 583
Csp6I GTAC 8 cut(s) 314, 403, 880, 1420, 1453, 1481, 1867, 1998
CviQI GTAC 8 cut(s) 314, 403, 880, 1420, 1453, 1481, 1867, 1998
DrdI GACNNNNNNGTC 1 cut(s) 1831
DseDI GACNNNNNNGTC 1 cut(s) 1831
EaeI YGGCCR 4 cut(s) 115, 176, 1954, 1966
Eam1104I CTCTTC 3 cut(s) 70, 1629, 2130
EarI CTCTTC 3 cut(s) 70, 1629, 2130
Eco130I CCWWGG 3 cut(s) 561, 883, 1196
Eco147I AGGCCT 2 cut(s) 327, 2275
Eco47I GGWCC 5 cut(s) 350, 437, 521, 557, 917
Eco57I CTGAAG 2 cut(s) 419, 777
EcoRII CCWGG 6 cut(s) 259, 409, 583, 644, 761, 2299
EcoT14I CCWWGG 3 cut(s) 561, 883, 1196
EcoT22I ATGCAT 1 cut(s) 1182
ErhI CCWWGG 3 cut(s) 561, 883, 1196
FalI AAGNNNNNCTT 2 cut(s) 2030, 2062
FaqI GGGAC 4 cut(s) 293, 626, 639, 1745
Fnu4HI GCNGC 5 cut(s) 609, 1122, 1853, 1924, 2521
FokI GGATG 4 cut(s) 227, 783, 971, 1285
Fsp4HI GCNGC 5 cut(s) 609, 1122, 1853, 1924, 2521
FspBI CTAG 5 cut(s) 933, 1040, 1047, 1395, 2331
FspI TGCGCA 1 cut(s) 1260
GlaI GCGC 1 cut(s) 1260
GluI GCNGC 5 cut(s) 609, 1122, 1853, 1924, 2521
GsaI CCCAGC 1 cut(s) 2111
GsuI CTGGAG 1 cut(s) 1131
HapII CCGG 3 cut(s) 1368, 2022, 2368
HhaI GCGC 1 cut(s) 1261
Hin6I GCGC 1 cut(s) 1259
HinP1I GCGC 1 cut(s) 1259
HincII GTYRAC 1 cut(s) 1532
HindII GTYRAC 1 cut(s) 1532
HindIII AAGCTT 2 cut(s) 1779, 2362
HinfI GANTC 7 cut(s) 92, 220, 462, 509, 1305, 1786, 1825
HpaII CCGG 3 cut(s) 1368, 2022, 2368
HphI GGTGA 2 cut(s) 249, 2445
Hpy166II GTNNAC 7 cut(s) 481, 581, 753, 777, 1268, 1532, 1824
Hpy188I TCNGA 5 cut(s) 192, 225, 425, 2174, 2339
Hpy188III TCNNGA 9 cut(s) 138, 238, 343, 956, 1082, 1110, 1217, 2250, 2491
Hpy8I GTNNAC 7 cut(s) 481, 581, 753, 777, 1268, 1532, 1824
HpyAV CCTTC 5 cut(s) 264, 1719, 2169, 2247, 2366
HpyCH4III ACNGT 8 cut(s) 518, 972, 1060, 1234, 1489, 1529, 2057, 2449
HpyCH4IV ACGT 3 cut(s) 1075, 1340, 1653
HpySE526I ACGT 3 cut(s) 1075, 1340, 1653
HspAI GCGC 1 cut(s) 1259
LguI GCTCTTC 1 cut(s) 1629
LmnI GCTCC 3 cut(s) 955, 1112, 1378
Lsp1109I GCAGC 3 cut(s) 620, 1864, 1935
LweI GCATC 7 cut(s) 658, 937, 1269, 1390, 2000, 2229, 2392
MabI ACCWGGT 1 cut(s) 583
MaeI CTAG 5 cut(s) 933, 1040, 1047, 1395, 2331
MaeII ACGT 3 cut(s) 1075, 1340, 1653
MaeIII GTNAC 6 cut(s) 710, 1060, 1346, 2012, 2051, 2443
MboII GAAGA 8 cut(s) 57, 1205, 1288, 1616, 1781, 2050, 2147, 2506
MflI RGATCY 4 cut(s) 126, 140, 181, 2473
MhlI GDGCHC 3 cut(s) 48, 583, 1270
MlsI TGGCCA 3 cut(s) 117, 178, 1956
MluNI TGGCCA 3 cut(s) 117, 178, 1956
MlyI GAGTC 3 cut(s) 518, 1795, 1819
Mox20I TGGCCA 3 cut(s) 117, 178, 1956
Mph1103I ATGCAT 1 cut(s) 1182
MscI TGGCCA 3 cut(s) 117, 178, 1956
MseI TTAA 9 cut(s) 72, 687, 867, 1460, 1581, 1706, 1716, 1770, 2048
Msp20I TGGCCA 3 cut(s) 117, 178, 1956
MspA1I CMGCKG 3 cut(s) 812, 1499, 1892
MspCI CTTAAG 1 cut(s) 2047
MspI CCGG 3 cut(s) 1368, 2022, 2368
MspR9I CCNGG 7 cut(s) 261, 411, 585, 646, 763, 2301, 2369
Mva1269I GAATGC 3 cut(s) 1209, 1684, 1686
MvaI CCWGG 6 cut(s) 261, 411, 585, 646, 763, 2301
NciI CCSGG 1 cut(s) 2369
NcoI CCATGG 2 cut(s) 561, 883
NheI GCTAGC 1 cut(s) 2330
NlaIV GGNNCC 4 cut(s) 128, 559, 992, 2475
NmuCI GTSAC 2 cut(s) 710, 1346
NsbI TGCGCA 1 cut(s) 1260
NsiI ATGCAT 1 cut(s) 1182
NspI RCATGY 1 cut(s) 1180
PagI TCATGA 1 cut(s) 2490
PasI CCCWGGG 2 cut(s) 645, 2300
PceI AGGCCT 2 cut(s) 327, 2275
PciSI GCTCTTC 1 cut(s) 1629
PctI GAATGC 3 cut(s) 1209, 1684, 1686
PfeI GAWTC 4 cut(s) 92, 220, 462, 1305
PfoI TCCNGGA 1 cut(s) 2367
PkrI GCNGC 5 cut(s) 610, 1123, 1854, 1925, 2522
PleI GAGTC 3 cut(s) 517, 1794, 1819
PpsI GAGTC 3 cut(s) 517, 1794, 1819
Ppu21I YACGTR 1 cut(s) 1341
PsiI TTATAA 4 cut(s) 738, 1239, 1758, 1986
Psp1406I AACGTT 1 cut(s) 1653
Psp6I CCWGG 6 cut(s) 259, 409, 583, 644, 761, 2299
PspFI CCCAGC 1 cut(s) 2107
PspGI CCWGG 6 cut(s) 259, 409, 583, 644, 761, 2299
PspN4I GGNNCC 4 cut(s) 128, 559, 992, 2475
PspPI GGNCC 9 cut(s) 350, 437, 521, 557, 917, 991, 1658, 1694, 2297
PsrI GAACNNNNNNTAC 2 cut(s) 1166, 1198
PstNI CAGNNNCTG 2 cut(s) 1544, 2447
PsuI RGATCY 4 cut(s) 126, 140, 181, 2473
PvuII CAGCTG 3 cut(s) 812, 1499, 1892
RsaI GTAC 8 cut(s) 315, 404, 881, 1421, 1454, 1482, 1868, 1999
RsaNI GTAC 8 cut(s) 314, 403, 880, 1420, 1453, 1481, 1867, 1998
SapI GCTCTTC 1 cut(s) 1629
SaqAI TTAA 9 cut(s) 72, 687, 867, 1460, 1581, 1706, 1716, 1770, 2048
SatI GCNGC 5 cut(s) 609, 1122, 1853, 1924, 2521
Sau96I GGNCC 9 cut(s) 350, 437, 521, 557, 917, 991, 1658, 1694, 2297
ScaI AGTACT 1 cut(s) 1454
SchI GAGTC 3 cut(s) 518, 1795, 1819
ScrFI CCNGG 7 cut(s) 261, 411, 585, 646, 763, 2301, 2369
SduI GDGCHC 3 cut(s) 48, 583, 1270
SexAI ACCWGGT 1 cut(s) 583
SfaNI GCATC 7 cut(s) 658, 937, 1269, 1390, 2000, 2229, 2392
SinI GGWCC 5 cut(s) 350, 437, 521, 557, 917
SmlI CTYRAG 1 cut(s) 2047
SmoI CTYRAG 1 cut(s) 2047
SpeI ACTAGT 1 cut(s) 932
SseBI AGGCCT 2 cut(s) 327, 2275
SsiI CCGC 1 cut(s) 1122
SspMI CTAG 5 cut(s) 933, 1040, 1047, 1395, 2331
StuI AGGCCT 2 cut(s) 327, 2275
StyD4I CCNGG 7 cut(s) 259, 409, 583, 644, 761, 2299, 2367
StyI CCWWGG 3 cut(s) 561, 883, 1196
TaaI ACNGT 8 cut(s) 518, 972, 1060, 1234, 1489, 1529, 2057, 2449
TaiI ACGT 3 cut(s) 1078, 1343, 1656
TaqI TCGA 1 cut(s) 507
TatI WGTACW 3 cut(s) 402, 1452, 1480
TauI GCSGC 1 cut(s) 1124
TfiI GAWTC 4 cut(s) 92, 220, 462, 1305
Tru1I TTAA 9 cut(s) 72, 687, 867, 1460, 1581, 1706, 1716, 1770, 2048
Tru9I TTAA 9 cut(s) 72, 687, 867, 1460, 1581, 1706, 1716, 1770, 2048
TscAI CASTG 3 cut(s) 604, 640, 1411
TseFI GTSAC 2 cut(s) 710, 1346
TseI GCWGC 4 cut(s) 608, 1852, 1923, 2520
Tsp45I GTSAC 2 cut(s) 710, 1346
TspGWI ACGGA 1 cut(s) 1285
TspRI CASTG 3 cut(s) 604, 640, 1411
Vha464I CTTAAG 1 cut(s) 2047
VneI GTGCAC 2 cut(s) 579, 1266
VpaK11BI GGWCC 5 cut(s) 350, 437, 521, 557, 917
XapI RAATTY 6 cut(s) 299, 895, 1105, 1594, 1897, 2461
XceI RCATGY 1 cut(s) 1180
XspI CTAG 5 cut(s) 933, 1040, 1047, 1395, 2331
ZrmI AGTACT 1 cut(s) 1454
Zsp2I ATGCAT 1 cut(s) 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.