Rh6BG358800

General transcription factor 3C polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0001600
Physical Location & Seq
Reverse (-)
58839960 .. 58843164
3205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG358800.1

Sequence Viewer

Length: 2841 bp
ATGGATAAAAACGGCAACGCTAGTTGTGATCGTGGGGAGGCTTTAAAGTATGTGTTTGATTTGGGTGCTGAGGATGACATTATAGAAGATGAGGAAGAAGAAGATGATGATGATAGTGATGAAGAATCCGAAGAAGAGGATGAGGAAGAAGAAGATGACACCTTTAATCCTCTGGATTCTGTAGACGATGGTACTTTTGCTGACCAAATTTACCCAGATTTTGTGGGGAAGGAGTATGAGACTTTAGCTCAGAAAAAACGAAAACCACTTGGGGATAGTCGCCCTAAAGGTTCAGTTAAGAAGGCCAGAAAAGATGAGGGTTCTAAAGAAAGCTTAGAGGAGGAATTAATGGAGTTCATGATGGGCAGGCCGCGAAGGAAATCAAGGAAGCTTAAGAAAAGAGGTAGAAGAAAAGGATCAAAGAACCAATGCAGCCCTGAAATTAGCAGGCTTCTTAGTAAGGCTCGAAATTGCTATGCACTTGGGGATTACAAAGAGGCCATACCCGTCTTGAAAGAAGTGATTAAGCAAGCACCGCAGTTGCCCGATTCCTATCAGACACTTGGAGATGTCCATAGTGCTCTTGGCGATAAAAATAGAGCCTTAAATTGCTACCATGTTGCTGGATATTTAGCACCGAAAAATCCTTCTTTGTGGACATTAATTTTTACAAAGTTCATGGAAGTAGGGAACATTTCTGAAGCTTCGACTAGCCTTTCGAGAGCAATATCAGCTGATCCTGAAGCCGAAAATGTTGTCGCTCTGAAGTTGGATCGTGCTTCACTCCATGTTCAGCTTAAGGATTATGAAAAAGCTGCTGCATTGTATGAAGAAATAATCCAAACCTGTCCTGGTAATGTTAAAGCACTGAAGACAGGAGCAGAGATGTATGAAAAATGCGGTCAGCGTGAGCGCTCTATCCATGTGCTGGAGGAGTATCTCAGAGCACATCCAACTGAAGCTGATTTGAGTGTCATTGATTTGTTAGTTTCTCTACTTATGGAAAACAATTTACATAATGAAGCTCTTCAGCATATTGAGCATGCACAACTGACACTCCATTCAGGAAAAGAGCTGCCTCTTGATATGAAAGTTAAAGCAGGAATTTGCCAAGCTAACCTCGGAAACATGCGCAAGGCAGCAAGTCTGTTCACTGAATTTGCAGAGAGTAACACTGAATTTAATAAAGGCTTTTTACATTTGAAAATTGCTAGATGTTATTTGTCCTTGAAGTATAGAGTACAAGCAATTTTCTACTTCTACCAAGCTTTAAAGACACTTGAAGAGCATATTGAGGCTCGATTGACATTGGCTTCTGTTCTCCTTGAAGAATCTAGAGATGATGAAGCTATATCTCTGCTGTCTCCTCCAAGAAATCGAGACTGTGTTCACCTCCCAACTGATAAAGCAACACCATGGTGGTGTGATGGAAAAGTGAAGCTGAAGCTTTGCAACATTTTCAGAGCTAAAGGGATGCACAAGGAACTTGTGGACGCAATCTATGATTTGGTGCACGAATCATTACAGATTATATCACTTGGGAGAACAGTGAAAAGGAAGCTCTTGAAAAAGGAATTGTTAGAAAGAGTCAAAGCCTTGGATGATCAGCAAACATGTAACGTTTTTTCGGGAAATAGATCACGAGCACTTCCTTTACCAGATCATCGGAAAGTTAACAGAGAAAAGAAGCGTCTTGAGGAAAAGGCAAAACTAAAGGAGGAAAAGAGAACTGAGGCAATGGCTGCTGGACATGACGGTCAAAGTGATGATTATTCAGATTCAGATGATGATCCTGAAATTGATCCACAAGAAATACAGAAAGAGCCTCCCCTGCCGGATCTAGTCAAGGAAAAAGAGAATCATGACCTCATATTAGATTTGTGTAAGTCACTCGCTTCCTTGAATAGACATTCTGAAGCGTTGAAGATTCTTAAGCTTGCTTTGAAATCAAGTAAAGGCATGGCAGCTTTCCGTGGGAAACTTCGGACTCTTGGAGCTCAAATAGCATACACCGATCCGGATCCTGAGCAGGGGTTGAACTATGTAAAATACATTGCAGACCAGCATCCATACAGCAATGCTGTCTGGAATTGCTATTACAAAGTAATCTCCAGATTTAAGGAGGATTGGTATCGTGACAAGCATTATAAATTTGTGCGCCACAGGCGCCATAGGCGCAACAAATTAAAAGACTGCGCACCACCCAGTATCATAAGTGGCCATCATTATACAAGAAAAAGTCGCCATCAGGATGCCGCAAGAGAATACCTTGAAGCTTATAAGTTATTGCCAGAGAATCCCCTGGTTAATCTGTGTGCTGGTACTGCCTTAATCAACTTGGCCCATGGACATAGACTTCAGAATAAGCACCACTGTATTGCTCAGGGCTTTGCATTCCTCTACAACAATTTGCGGGTTTGCAAAAGCAGCCAGGAGGCTTTGTACAACATAGCCAGGGCATTCCATCAAGTTGGCCTTGTGACTCTGGCAGCTTCCTACTACGAAAAAGTTCTTGACATTCATGTGAAGGACTACCCCATACCAAAACTTCCCCATGAAAATCCAGACTACAATCAAAATCGATTACCAGGTTACTGTGATCTTCGCAGAGAAGCAGCTTTTAATCTACATCTTATCTACAAACAGTGTGGATCATTTGATCTTGCTCGACAGACACAGCAGCTGCTGCAATATAGTAACACTATAATCTCACAGCAAGATGATCACCACAGTAGCCTCAGCAATGAGGATGCACATAGGCAATCCTTACCCAGAGGAACTATCTGGAATTCTTCCCCACAAGAGGAGGCTACTCGTGCACTTGTATCAGACTATCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_19 TPR_6 TPR_7 TPR_8

Protein Analysis

946

Amino Acids

108.14

Weight (kDa)

6.44

Isoelectric Point (pI)

44.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_19 PF14559 160 - 221 2.5e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2148, 2280
AasI GACNNNNNNGTC 1 cut(s) 1755
Acc16I TGCGCA 2 cut(s) 1133, 2197
AccB1I GGYRCC 1 cut(s) 2166
AccB7I CCANNNNNTGG 1 cut(s) 928
AccI GTMKAC 1 cut(s) 183
AccII CGCG 1 cut(s) 373
AccIII TCCGGA 1 cut(s) 2017
AciI CCGC 5 cut(s) 371, 536, 900, 2256, 2413
AclI AACGTT 1 cut(s) 1620
AcoI YGGCCR 1 cut(s) 2218
AcsI RAATTY 6 cut(s) 207, 1104, 1157, 1178, 2150, 2788
AcuI CTGAAG 9 cut(s) 720, 762, 785, 890, 978, 1013, 1463, 1935, 2342
AcyI GRCGYC 1 cut(s) 2167
AfaI GTAC 4 cut(s) 193, 1242, 2323, 2444
AfeI AGCGCT 1 cut(s) 914
AfiI CCNNNNNNNGG 3 cut(s) 928, 2030, 2803
AflII CTTAAG 3 cut(s) 392, 797, 1931
AflIII ACRYGT 1 cut(s) 1613
AjnI CCWGG 5 cut(s) 850, 2301, 2430, 2453, 2587
AleI CACNNNNGTG 1 cut(s) 1417
Alw21I GWGCWC 6 cut(s) 583, 949, 1515, 1648, 1999, 2821
Alw26I GTCTC 3 cut(s) 233, 1368, 1374
Alw44I GTGCAC 2 cut(s) 1511, 2817
AlwNI CAGNNNCTG 2 cut(s) 2683, 2686
Aor13HI TCCGGA 1 cut(s) 2017
Aor51HI AGCGCT 1 cut(s) 914
AoxI GGCC 6 cut(s) 303, 368, 498, 2218, 2340, 2473
ApaLI GTGCAC 2 cut(s) 1511, 2817
ApoI RAATTY 6 cut(s) 207, 1104, 1157, 1178, 2150, 2788
ArsI GACNNNNNNTTYG 4 cut(s) 700, 732, 741, 773
AseI ATTAAT 2 cut(s) 347, 662
Asp700I GAANNNNTTC 2 cut(s) 1026, 2508
AspLEI GCGC 6 cut(s) 915, 1134, 2160, 2169, 2178, 2198
AspS9I GGNCC 1 cut(s) 2341
AsuHPI GGTGA 2 cut(s) 1382, 2717
BaeGI GKGCMC 2 cut(s) 1515, 2821
BalI TGGCCA 1 cut(s) 2220
BamHI GGATCC 1 cut(s) 2020
BanI GGYRCC 1 cut(s) 2166
BanII GRGCYC 1 cut(s) 1999
BauI CACGAG 2 cut(s) 1641, 2814
BbsI GAAGAC 1 cut(s) 878
Bbv12I GWGCWC 6 cut(s) 583, 949, 1515, 1648, 1999, 2821
BbvCI CCTCAGC 2 cut(s) 69, 2738
BccI CCATC 6 cut(s) 182, 355, 1421, 2229, 2253, 2472
BceAI ACGGC 1 cut(s) 28
BciT130I CCWGG 5 cut(s) 852, 2303, 2432, 2455, 2589
BclI TGATCA 2 cut(s) 1603, 2722
BcoDI GTCTC 3 cut(s) 233, 1368, 1374
BfaI CTAG 5 cut(s) 21, 711, 1212, 1335, 1841
BfmI CTRYAG 1 cut(s) 180
BfoI RGCGCY 2 cut(s) 916, 2170
BfrI CTTAAG 3 cut(s) 392, 797, 1931
Bme1390I CCNGG 5 cut(s) 852, 2303, 2432, 2455, 2589
BmgT120I GGNCC 1 cut(s) 2341
BmiI GGNNCC 2 cut(s) 2022, 2168
BmrFI CCNGG 5 cut(s) 852, 2303, 2432, 2455, 2589
BmrI ACTGGG 1 cut(s) 2199
BmsI GCATC 4 cut(s) 1464, 2074, 2242, 2740
BmuI ACTGGG 1 cut(s) 2199
BpiI GAAGAC 1 cut(s) 878
BpmI CTGGAG 2 cut(s) 950, 2095
Bpu10I CCTNAGC 4 cut(s) 69, 2025, 2382, 2738
BpuEI CTTGAG 1 cut(s) 1715
Bsa29I ATCGAT 1 cut(s) 2581
BsaBI GATNNNNATC 4 cut(s) 552, 1788, 2019, 2130
BsaHI GRCGYC 1 cut(s) 2167
BsaJI CCNNGG 7 cut(s) 1120, 1415, 1596, 1972, 2301, 2344, 2454
BsaWI WCCGGW 1 cut(s) 2017
BsaXI ACNNNNNCTCC 6 cut(s) 1041, 1071, 2114, 2144, 2426, 2456
Bsc4I CCNNNNNNNGG 3 cut(s) 928, 2030, 2803
Bse1I ACTGG 1 cut(s) 2205
Bse3DI GCAATG 4 cut(s) 1743, 2052, 2083, 2749
Bse8I GATNNNNATC 4 cut(s) 552, 1788, 2019, 2130
BseAI TCCGGA 1 cut(s) 2017
BseBI CCWGG 5 cut(s) 852, 2303, 2432, 2455, 2589
BseCI ATCGAT 1 cut(s) 2581
BseDI CCNNGG 7 cut(s) 1120, 1415, 1596, 1972, 2301, 2344, 2454
BseGI GGATG 8 cut(s) 79, 145, 949, 1479, 1606, 2065, 2257, 2755
BseJI GATNNNNATC 4 cut(s) 552, 1788, 2019, 2130
BseLI CCNNNNNNNGG 3 cut(s) 928, 2030, 2803
BseMI GCAATG 4 cut(s) 1743, 2052, 2083, 2749
BseMII CTCAG 7 cut(s) 60, 263, 955, 1722, 2016, 2396, 2752
BseNI ACTGG 1 cut(s) 2205
BseRI GAGGAG 4 cut(s) 353, 947, 1356, 2819
BseSI GKGCMC 2 cut(s) 1515, 2821
Bsh1236I CGCG 1 cut(s) 373
BshFI GGCC 6 cut(s) 305, 370, 500, 2220, 2342, 2475
BshNI GGYRCC 1 cut(s) 2166
BshVI ATCGAT 1 cut(s) 2581
BsiHKAI GWGCWC 6 cut(s) 583, 949, 1515, 1648, 1999, 2821
BsiSI CCGG 2 cut(s) 1835, 2018
BslI CCNNNNNNNGG 3 cut(s) 928, 2030, 2803
BsmAI GTCTC 3 cut(s) 233, 1368, 1374
BsmI GAATGC 2 cut(s) 2393, 2459
BsnI GGCC 6 cut(s) 305, 370, 500, 2220, 2342, 2475
Bsp1286I GDGCHC 6 cut(s) 583, 949, 1515, 1648, 1999, 2821
Bsp13I TCCGGA 1 cut(s) 2017
Bsp1407I TGTACA 1 cut(s) 2442
Bsp19I CCATGG 2 cut(s) 1415, 2344
BspACI CCGC 5 cut(s) 371, 536, 900, 2256, 2413
BspANI GGCC 6 cut(s) 305, 370, 500, 2220, 2342, 2475
BspCNI CTCAG 7 cut(s) 61, 262, 954, 1723, 2017, 2395, 2751
BspDI ATCGAT 1 cut(s) 2581
BspEI TCCGGA 1 cut(s) 2017
BspFNI CGCG 1 cut(s) 373
BspHI TCATGA 2 cut(s) 357, 1861
BspLI GGNNCC 2 cut(s) 2022, 2168
BspQI GCTCTTC 2 cut(s) 1032, 1278
BspT107I GGYRCC 1 cut(s) 2166
BspTI CTTAAG 3 cut(s) 392, 797, 1931
BsrDI GCAATG 4 cut(s) 1743, 2052, 2083, 2749
BsrGI TGTACA 1 cut(s) 2442
BsrI ACTGG 1 cut(s) 2205
BssECI CCNNGG 7 cut(s) 1120, 1415, 1596, 1972, 2301, 2344, 2454
BssNI GRCGYC 1 cut(s) 2167
BssSI CACGAG 2 cut(s) 1641, 2814
BssT1I CCWWGG 3 cut(s) 1415, 1596, 2344
Bst2BI CACGAG 2 cut(s) 1641, 2814
Bst2UI CCWGG 5 cut(s) 852, 2303, 2432, 2455, 2589
Bst4CI ACNGT 7 cut(s) 1385, 1549, 1757, 2375, 2597, 2646, 2732
Bst6I CTCTTC 3 cut(s) 129, 1032, 1278
BstACI GRCGYC 1 cut(s) 2167
BstAFI CTTAAG 3 cut(s) 392, 797, 1931
BstAPI GCANNNNNTGC 2 cut(s) 1742, 2686
BstAUI TGTACA 1 cut(s) 2442
BstC8I GCNNGC 5 cut(s) 368, 449, 531, 1044, 1938
BstDEI CTNAG 9 cut(s) 69, 249, 334, 455, 941, 1731, 2025, 2382, 2738
BstDSI CCRYGG 3 cut(s) 1415, 1972, 2344
BstF5I GGATG 8 cut(s) 79, 145, 949, 1479, 1606, 2065, 2257, 2755
BstFNI CGCG 1 cut(s) 373
BstH2I RGCGCY 2 cut(s) 916, 2170
BstHHI GCGC 6 cut(s) 915, 1134, 2160, 2169, 2178, 2198
BstMAI GTCTC 3 cut(s) 233, 1368, 1374
BstNI CCWGG 5 cut(s) 852, 2303, 2432, 2455, 2589
BstNSI RCATGY 3 cut(s) 1046, 1132, 1617
BstSCI CCNGG 5 cut(s) 850, 2301, 2430, 2453, 2587
BstSFI CTRYAG 1 cut(s) 180
BstSLI GKGCMC 2 cut(s) 1515, 2821
BstUI CGCG 1 cut(s) 373
BstV2I GAAGAC 1 cut(s) 878
BstX2I RGATCY 2 cut(s) 1837, 2020
BstXI CCANNNNNNTGG 2 cut(s) 623, 2471
BstYI RGATCY 2 cut(s) 1837, 2020
Bsu15I ATCGAT 1 cut(s) 2581
BsuRI GGCC 6 cut(s) 305, 370, 500, 2220, 2342, 2475
BsuTUI ATCGAT 1 cut(s) 2581
BtgI CCRYGG 3 cut(s) 1415, 1972, 2344
BtsCI GGATG 8 cut(s) 79, 145, 949, 1479, 1606, 2065, 2257, 2755
BtsIMutI CAGTG 6 cut(s) 866, 1152, 1173, 1554, 2371, 2651
Cac8I GCNNGC 5 cut(s) 368, 449, 531, 1044, 1938
CaiI CAGNNNCTG 2 cut(s) 2683, 2686
CciI TCATGA 2 cut(s) 357, 1861
CfoI GCGC 6 cut(s) 915, 1134, 2160, 2169, 2178, 2198
Cfr13I GGNCC 1 cut(s) 2341
ClaI ATCGAT 1 cut(s) 2581
CseI GACGC 2 cut(s) 1502, 1679
CsiI ACCWGGT 1 cut(s) 2587
Csp6I GTAC 4 cut(s) 192, 1241, 2322, 2443
CspCI CAANNNNNGTGG 2 cut(s) 2629, 2664
CviQI GTAC 4 cut(s) 192, 1241, 2322, 2443
DdeI CTNAG 9 cut(s) 69, 249, 334, 455, 941, 1731, 2025, 2382, 2738
DinI GGCGCC 1 cut(s) 2168
DraI TTTAAA 2 cut(s) 45, 1272
DrdI GACNNNNNNGTC 1 cut(s) 1755
DseDI GACNNNNNNGTC 1 cut(s) 1755
EaeI YGGCCR 1 cut(s) 2218
Eam1104I CTCTTC 3 cut(s) 129, 1032, 1278
EarI CTCTTC 3 cut(s) 129, 1032, 1278
Ecl136II GAGCTC 1 cut(s) 1997
Eco130I CCWWGG 3 cut(s) 1415, 1596, 2344
Eco24I GRGCYC 1 cut(s) 1999
Eco47III AGCGCT 1 cut(s) 914
Eco53kI GAGCTC 1 cut(s) 1997
Eco57I CTGAAG 9 cut(s) 720, 762, 785, 890, 978, 1013, 1463, 1935, 2342
EcoICRI GAGCTC 1 cut(s) 1997
EcoRI GAATTC 1 cut(s) 2788
EcoRII CCWGG 5 cut(s) 850, 2301, 2430, 2453, 2587
EcoT14I CCWWGG 3 cut(s) 1415, 1596, 2344
EcoT38I GRGCYC 1 cut(s) 1999
EgeI GGCGCC 1 cut(s) 2168
EheI GGCGCC 1 cut(s) 2168
ErhI CCWWGG 3 cut(s) 1415, 1596, 2344
FalI AAGNNNNNCTT 2 cut(s) 2460, 2492
FauI CCCGC 1 cut(s) 2406
FbaI TGATCA 2 cut(s) 1603, 2722
FblI GTMKAC 1 cut(s) 183
FokI GGATG 8 cut(s) 86, 152, 936, 1486, 1613, 2052, 2264, 2762
FriOI GRGCYC 1 cut(s) 1999
FspBI CTAG 5 cut(s) 21, 711, 1212, 1335, 1841
FspI TGCGCA 2 cut(s) 1133, 2197
GlaI GCGC 6 cut(s) 914, 1133, 2159, 2168, 2177, 2197
GsuI CTGGAG 2 cut(s) 950, 2095
HaeII RGCGCY 2 cut(s) 916, 2170
HaeIII GGCC 6 cut(s) 305, 370, 500, 2220, 2342, 2475
HapII CCGG 2 cut(s) 1835, 2018
HgaI GACGC 2 cut(s) 1502, 1679
HhaI GCGC 6 cut(s) 915, 1134, 2160, 2169, 2178, 2198
Hin1I GRCGYC 1 cut(s) 2167
Hin6I GCGC 6 cut(s) 913, 1132, 2158, 2167, 2176, 2196
HinP1I GCGC 6 cut(s) 913, 1132, 2158, 2167, 2176, 2196
HincII GTYRAC 1 cut(s) 1675
HindII GTYRAC 1 cut(s) 1675
HindIII AAGCTT 7 cut(s) 331, 389, 702, 1266, 1445, 1934, 2274
HpaI GTTAAC 1 cut(s) 1675
HpaII CCGG 2 cut(s) 1835, 2018
HphI GGTGA 2 cut(s) 1382, 2717
Hpy166II GTNNAC 8 cut(s) 184, 657, 1152, 1390, 1492, 1513, 1675, 2819
Hpy8I GTNNAC 8 cut(s) 184, 657, 1152, 1390, 1492, 1513, 1675, 2819
HpyAV CCTTC 5 cut(s) 223, 295, 369, 657, 2521
HpyCH4III ACNGT 7 cut(s) 1385, 1549, 1757, 2375, 2597, 2646, 2732
HpyCH4IV ACGT 1 cut(s) 1620
HpyF3I CTNAG 9 cut(s) 69, 249, 334, 455, 941, 1731, 2025, 2382, 2738
HpySE526I ACGT 1 cut(s) 1620
Hsp92I GRCGYC 1 cut(s) 2167
HspAI GCGC 6 cut(s) 913, 1132, 2158, 2167, 2176, 2196
KasI GGCGCC 1 cut(s) 2166
Kpn2I TCCGGA 1 cut(s) 2017
Ksp22I TGATCA 2 cut(s) 1603, 2722
KspAI GTTAAC 1 cut(s) 1675
LguI GCTCTTC 2 cut(s) 1032, 1278
LmnI GCTCC 2 cut(s) 878, 1994
LweI GCATC 4 cut(s) 1464, 2074, 2242, 2740
MabI ACCWGGT 1 cut(s) 2587
MaeI CTAG 5 cut(s) 21, 711, 1212, 1335, 1841
MaeII ACGT 1 cut(s) 1620
MaeIII GTNAC 7 cut(s) 1169, 1616, 1887, 2135, 2479, 2591, 2696
MflI RGATCY 2 cut(s) 1837, 2020
MhlI GDGCHC 6 cut(s) 583, 949, 1515, 1648, 1999, 2821
MlsI TGGCCA 1 cut(s) 2220
MluNI TGGCCA 1 cut(s) 2220
Mly113I GGCGCC 1 cut(s) 2167
MlyI GAGTC 3 cut(s) 1596, 1981, 2476
MmeI TCCRAC 2 cut(s) 750, 977
Mox20I TGGCCA 1 cut(s) 2220
MroI TCCGGA 1 cut(s) 2017
MroXI GAANNNNTTC 2 cut(s) 1026, 2508
MscI TGGCCA 1 cut(s) 2220
MslI CAYNNNNRTG 4 cut(s) 1417, 1420, 2250, 2522
Msp20I TGGCCA 1 cut(s) 2220
MspA1I CMGCKG 2 cut(s) 734, 2683
MspCI CTTAAG 3 cut(s) 392, 797, 1931
MspI CCGG 2 cut(s) 1835, 2018
MspR9I CCNGG 5 cut(s) 852, 2303, 2432, 2455, 2589
Mva1269I GAATGC 2 cut(s) 2393, 2459
MvaI CCWGG 5 cut(s) 852, 2303, 2432, 2455, 2589
MvnI CGCG 1 cut(s) 373
NarI GGCGCC 1 cut(s) 2167
NcoI CCATGG 2 cut(s) 1415, 2344
NlaIV GGNNCC 2 cut(s) 2022, 2168
NmuCI GTSAC 3 cut(s) 1887, 2135, 2479
NsbI TGCGCA 2 cut(s) 1133, 2197
NspI RCATGY 3 cut(s) 1046, 1132, 1617
OliI CACNNNNGTG 1 cut(s) 1417
PaeI GCATGC 1 cut(s) 1046
PagI TCATGA 2 cut(s) 357, 1861
PciI ACATGT 1 cut(s) 1613
PciSI GCTCTTC 2 cut(s) 1032, 1278
PctI GAATGC 2 cut(s) 2393, 2459
PdmI GAANNNNTTC 2 cut(s) 1026, 2508
PfeI GAWTC 9 cut(s) 125, 176, 548, 1331, 1517, 1778, 1858, 1927, 2296
PflMI CCANNNNNTGG 1 cut(s) 928
PleI GAGTC 3 cut(s) 1595, 1981, 2476
PluTI GGCGCC 1 cut(s) 2170
PpsI GAGTC 3 cut(s) 1595, 1981, 2476
PscI ACATGT 1 cut(s) 1613
PshBI ATTAAT 2 cut(s) 347, 662
PsiI TTATAA 2 cut(s) 2148, 2280
Psp124BI GAGCTC 1 cut(s) 1999
Psp1406I AACGTT 1 cut(s) 1620
Psp6I CCWGG 5 cut(s) 850, 2301, 2430, 2453, 2587
PspGI CCWGG 5 cut(s) 850, 2301, 2430, 2453, 2587
PspN4I GGNNCC 2 cut(s) 2022, 2168
PspPI GGNCC 1 cut(s) 2341
PstNI CAGNNNCTG 2 cut(s) 2683, 2686
PsuI RGATCY 2 cut(s) 1837, 2020
PvuII CAGCTG 2 cut(s) 734, 2683
RsaI GTAC 4 cut(s) 193, 1242, 2323, 2444
RsaNI GTAC 4 cut(s) 192, 1241, 2322, 2443
RseI CAYNNNNRTG 4 cut(s) 1417, 1420, 2250, 2522
SacI GAGCTC 1 cut(s) 1999
SapI GCTCTTC 2 cut(s) 1032, 1278
Sau96I GGNCC 1 cut(s) 2341
SchI GAGTC 3 cut(s) 1596, 1981, 2476
ScrFI CCNGG 5 cut(s) 852, 2303, 2432, 2455, 2589
SduI GDGCHC 6 cut(s) 583, 949, 1515, 1648, 1999, 2821
SexAI ACCWGGT 1 cut(s) 2587
SfaNI GCATC 4 cut(s) 1464, 2074, 2242, 2740
SfcI CTRYAG 1 cut(s) 180
SfoI GGCGCC 1 cut(s) 2168
SmiMI CAYNNNNRTG 4 cut(s) 1417, 1420, 2250, 2522
SmlI CTYRAG 4 cut(s) 392, 797, 1694, 1931
SmoI CTYRAG 4 cut(s) 392, 797, 1694, 1931
SphI GCATGC 1 cut(s) 1046
SsiI CCGC 5 cut(s) 371, 536, 900, 2256, 2413
SspDI GGCGCC 1 cut(s) 2166
SspMI CTAG 5 cut(s) 21, 711, 1212, 1335, 1841
SstI GAGCTC 1 cut(s) 1999
StyD4I CCNGG 5 cut(s) 850, 2301, 2430, 2453, 2587
StyI CCWWGG 3 cut(s) 1415, 1596, 2344
TaaI ACNGT 7 cut(s) 1385, 1549, 1757, 2375, 2597, 2646, 2732
TaiI ACGT 1 cut(s) 1623
TaqI TCGA 7 cut(s) 466, 707, 719, 1300, 1378, 2581, 2668
TatI WGTACW 2 cut(s) 1240, 2442
TauI GCSGC 2 cut(s) 373, 2258
TfiI GAWTC 9 cut(s) 125, 176, 548, 1331, 1517, 1778, 1858, 1927, 2296
TscAI CASTG 6 cut(s) 873, 1159, 1180, 1554, 2378, 2651
TseFI GTSAC 3 cut(s) 1887, 2135, 2479
Tsp45I GTSAC 3 cut(s) 1887, 2135, 2479
TspGWI ACGGA 1 cut(s) 1961
TspRI CASTG 6 cut(s) 873, 1159, 1180, 1554, 2378, 2651
Van91I CCANNNNNTGG 1 cut(s) 928
Vha464I CTTAAG 3 cut(s) 392, 797, 1931
VneI GTGCAC 2 cut(s) 1511, 2817
VspI ATTAAT 2 cut(s) 347, 662
XapI RAATTY 6 cut(s) 207, 1104, 1157, 1178, 2150, 2788
XbaI TCTAGA 1 cut(s) 1334
XceI RCATGY 3 cut(s) 1046, 1132, 1617
XcmI CCANNNNNNNNNTGG 2 cut(s) 581, 848
XmiI GTMKAC 1 cut(s) 183
XmnI GAANNNNTTC 2 cut(s) 1026, 2508
XspI CTAG 5 cut(s) 21, 711, 1212, 1335, 1841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.