RchiOBHm_Chr6g0293861

General transcription factor 3C polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0001600
Physical Location & Seq
Reverse (-)
56357875 .. 56360697
2823 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26370

Sequence Viewer

Length: 2712 bp
ATGGATAAAAACGGCAATGCTAGTTGTGATCGTGGGGAGGCTTTAAAGTATGTGTTTGATTTGGGTGCTGAGGATGACATTATAGAAGATGAGGAAGAAGAAGAAGAAGATGATGATGATAGTGATGAAGAATCCGAAGAAGAGGATGAGGAAGAAGAAGAAGAAGATGACACCTTTAATCCTTTGGATTCTGTAGACGATGGTTCTTTTGCTGACCAAATTTACCCAGATTTTGTGGGGCAGGAGTATGAGACTTTAGCTAAGAAAAAACGAAAACCACTTGGGGATAGTCGCCCTAAAGGTTCCGTTAAGAAGGCCAGAAAAGATGAGGGTTCTAAAGAAAGCTTAGAGGAGGAATTAATGGCGTTCATGATGGGCAGGCCGCGAAGGAGATCAAGGAAGCTTAAGAAAAGAGGTAGAAGAAAAGGATCAAAGAACCAATGCAGCCCTGAAATTAGCAGGCTTCTTAGTAAGGCTCGAAATTGCTATGCACTTGGGGATTACAAAGAGGCCATACCCGTCTTGAAAGAAGTGATTAAGCAAGCACCGCATTTGCCCGATTCCTATCAGACACTTGGAGATGTCCATAGTGCTCTTGGCGATAAAAATAGAGCCTTAAATTGCTACCATGTTGCTGCACATTTAGCACCGAAAAATCCTTCTTTGTGGACATTAATTTTTACAAAGTTCATGGAAGTAGGGAACATTTCTGAAGCTTCGACTAGCCTTTCGAGAGCAATATCAGCTGATCCTGAAGCCGAAAATGTTGTTTCTCTGAAGTTGGATCGTGCTTCACTCCATGTTCAGCTTAAAGATTATGAAAAAGCTGCTGCATTGTATGAAGAAATAATCCAAACCTGTCCTGGTAATGTTAAAGCACTGAAGACAGGAGCAGAGATGTATGAAAAATGCGGTCAGCGTGAGCGCTCTATCCATGTGCTGGAGGAGTATCTCAGAGCACATCCAACTGAAGCTGATTTGAGTGTCATTGATTTGTTAGTTTCTCTACTTATGGAAAACAATTTACATAATGAAGCTCTTCAGCATATTGAGCATGCACAACTGACACTCCATTCGGGAAAAGAGCTGCCTCTTGAGATGAAAGTTAAAGCAGGAATTTGCCAAGCTAACCTCGGAAACATGCGCAAGGCAGCAAGTCTGTTCACTGAATTTGCAGAGAGTAACACTGAATTTAATAAAGGCTTTTTACATTTGAAAATTGCTAGATGTTATTTGTCCTTGAAGTATAGAGTACAAGCAATTTTCTACTTCTACCAAGCTTTAAAGACACTTGAAGAGCATATTGAGGCTCGATTGACATTGGCTTCTGTTCTCCTTGAAGACTCTAGAGATGATGAAGCTATATCTCTGCTGTCTCCTCCAAGAAATCGAGACTGTGTTCACCTCCCAACTGATAAAGCAACACCATGGTGGTGTGATGGAAAAGTGAAGCTGAAGCTTTGCAACATTTTCAGAGCTAAAGGGATGCACAAGGAACTTGTGGATGCAATCTATGATTTGGTACAAGAATCATTACAGATTATATCACTTGGGAGAACAGTGAAAAGGAAGCTCTTGAAAAAGGAATTGTTAGAAAGAGTCAAAGCCTTGGATGATCAGCAAACATGTAACGTTTTTTCGGGAAATAGATCACGAGCACTTCCTTTACCAGATCATCGGAAAGTTAACAGAGAAAAGAAGCGTCTTGAGGAAAAGGCAAAACTAAAGGAGGAAAAGAGAACTGAGGCAATGGCTGCTGGACATGACGGACAAAGTGATGATTATTCAGATTCAGATGATGATCCGGAAATTGATCCACAAGAAATACAGAAAGAGCCTCCCCTGCCGGATCTAGTCAAGGAAAAAGAGAATCATGACCTCATATTAGATTTGTGTAAGTCACTCGCTTCCTTGAATAGACATTCTGAAGCGTTAAAGATTCTTAAGCTTGCTTTGAAATCAAGTAAAGGCATGGCAGCTTTCCGTGGGAAACTTCGGAATCTTGGAGCTCAAATAGCATACACCAATCCGGATCCTGAGCAGGGGTTGAACTATGTAAAATACATTGCAGACCAGCATCCATACAGCAATGCTGTCTGGAATTGCTATTACAAAGTAATCTCCAGATTTAAGGAGGATTGGTATCGTGACAAGCATTATAAATTTGTGCGCCACAGGCGCCATAGGCGCAACAAATTAAAAGACTGTGCACCACCCAGTATCATAAGTGGCCATCATTATACAAGAAAAAGTCGCCATCAGGATGCCGCAAGAGAATACCTTGAAGCTTATAAGTTATTGCCAGAGAATCCCCTGGTTAATCTGTGTGCTGGTACTGCCTTAATCAACTTGGCCCATGGACATAGACTTCAGAATAAGCACCACTGTATTGCTCAGGGCTTTGCATTCCTCTACAACAATTTGCGGGTTTGCAAAAGCAGCCAGGAGGCTTTGTACAACATAGCCAGGGCATTCCATCAAGTTGGCCTTGTGACTCTGGCAGCTTCCTACTACGAAAAAGTTCTTGACATTCATGTGAAGGACTACCCCATACCAAAACTTCCCCATGAAAATCCAGACTACAATCAAAATCGATTACCAGGTTACTGTGATCTTCGCAGAGAAGCAGCTTTTAATCTACATCTTATCTACAAACAGTGCGGATCATTTGATCTTGCTCGACAGGTCTTGAGAGATCACTGCACCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_19 TPR_6 TPR_7 TPR_8

Protein Analysis

903

Amino Acids

103.34

Weight (kDa)

6.54

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_19 PF14559 164 - 225 6.8e-07 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2160, 2292
Acc16I TGCGCA 1 cut(s) 1145
AccB1I GGYRCC 1 cut(s) 2178
AccB7I CCANNNNNTGG 1 cut(s) 940
AccI GTMKAC 1 cut(s) 195
AccII CGCG 1 cut(s) 385
AccIII TCCGGA 2 cut(s) 1804, 2029
AciI CCGC 6 cut(s) 383, 548, 912, 2268, 2425, 2661
AclI AACGTT 1 cut(s) 1632
AclWI GGATC 9 cut(s) 436, 743, 792, 1796, 1808, 1857, 2027, 2040, 2671
AcoI YGGCCR 1 cut(s) 2230
AcsI RAATTY 5 cut(s) 219, 1116, 1169, 1190, 2162
AcuI CTGAAG 9 cut(s) 732, 774, 797, 902, 990, 1025, 1475, 1947, 2354
AcyI GRCGYC 1 cut(s) 2179
AfaI GTAC 4 cut(s) 1254, 1524, 2335, 2456
AfeI AGCGCT 1 cut(s) 926
AfiI CCNNNNNNNGG 2 cut(s) 940, 2042
AflII CTTAAG 2 cut(s) 404, 1943
AflIII ACRYGT 1 cut(s) 1625
AjnI CCWGG 5 cut(s) 862, 2313, 2442, 2465, 2599
AleI CACNNNNGTG 1 cut(s) 1429
Alw21I GWGCWC 5 cut(s) 595, 961, 1660, 2011, 2212
Alw26I GTCTC 3 cut(s) 245, 1380, 1386
Alw44I GTGCAC 1 cut(s) 2208
AlwI GGATC 9 cut(s) 436, 743, 792, 1796, 1808, 1857, 2027, 2040, 2671
Aor13HI TCCGGA 2 cut(s) 1804, 2029
Aor51HI AGCGCT 1 cut(s) 926
AoxI GGCC 6 cut(s) 315, 380, 510, 2230, 2352, 2485
ApaLI GTGCAC 1 cut(s) 2208
ApoI RAATTY 5 cut(s) 219, 1116, 1169, 1190, 2162
ArsI GACNNNNNNTTYG 4 cut(s) 712, 744, 1057, 1089
AseI ATTAAT 2 cut(s) 359, 674
Asp700I GAANNNNTTC 2 cut(s) 1038, 2520
AspLEI GCGC 5 cut(s) 927, 1146, 2172, 2181, 2190
AspS9I GGNCC 1 cut(s) 2353
AsuHPI GGTGA 1 cut(s) 1394
BaeGI GKGCMC 1 cut(s) 2212
BalI TGGCCA 1 cut(s) 2232
BamHI GGATCC 1 cut(s) 2032
BanI GGYRCC 1 cut(s) 2178
BanII GRGCYC 1 cut(s) 2011
BauI CACGAG 1 cut(s) 1653
BbsI GAAGAC 2 cut(s) 890, 1347
Bbv12I GWGCWC 5 cut(s) 595, 961, 1660, 2011, 2212
BbvCI CCTCAGC 1 cut(s) 69
BccI CCATC 6 cut(s) 194, 367, 1433, 2241, 2265, 2484
BceAI ACGGC 1 cut(s) 28
BciT130I CCWGG 5 cut(s) 864, 2315, 2444, 2467, 2601
BclI TGATCA 1 cut(s) 1615
BcoDI GTCTC 3 cut(s) 245, 1380, 1386
BfaI CTAG 5 cut(s) 21, 723, 1224, 1347, 1853
BfmI CTRYAG 1 cut(s) 192
BfoI RGCGCY 2 cut(s) 928, 2182
BfrI CTTAAG 2 cut(s) 404, 1943
Bme1390I CCNGG 5 cut(s) 864, 2315, 2444, 2467, 2601
BmgT120I GGNCC 1 cut(s) 2353
BmiI GGNNCC 3 cut(s) 304, 2034, 2180
BmrFI CCNGG 5 cut(s) 864, 2315, 2444, 2467, 2601
BmrI ACTGGG 1 cut(s) 2211
BmsI GCATC 4 cut(s) 1476, 1495, 2086, 2254
BmuI ACTGGG 1 cut(s) 2211
BpiI GAAGAC 2 cut(s) 890, 1347
BpmI CTGGAG 2 cut(s) 962, 2107
Bpu10I CCTNAGC 3 cut(s) 69, 2037, 2394
BpuEI CTTGAG 3 cut(s) 1115, 1727, 2710
Bsa29I ATCGAT 1 cut(s) 2593
BsaBI GATNNNNATC 3 cut(s) 564, 1800, 2142
BsaHI GRCGYC 1 cut(s) 2179
BsaJI CCNNGG 7 cut(s) 1132, 1427, 1608, 1984, 2313, 2356, 2466
BsaWI WCCGGW 2 cut(s) 1804, 2029
BsaXI ACNNNNNCTCC 6 cut(s) 1053, 1083, 2126, 2156, 2438, 2468
Bsc4I CCNNNNNNNGG 2 cut(s) 940, 2042
Bse1I ACTGG 1 cut(s) 2217
Bse3DI GCAATG 4 cut(s) 22, 1755, 2064, 2095
Bse8I GATNNNNATC 3 cut(s) 564, 1800, 2142
BseAI TCCGGA 2 cut(s) 1804, 2029
BseBI CCWGG 5 cut(s) 864, 2315, 2444, 2467, 2601
BseCI ATCGAT 1 cut(s) 2593
BseDI CCNNGG 7 cut(s) 1132, 1427, 1608, 1984, 2313, 2356, 2466
BseGI GGATG 8 cut(s) 79, 151, 961, 1491, 1510, 1618, 2077, 2269
BseJI GATNNNNATC 3 cut(s) 564, 1800, 2142
BseLI CCNNNNNNNGG 2 cut(s) 940, 2042
BseMI GCAATG 4 cut(s) 22, 1755, 2064, 2095
BseMII CTCAG 5 cut(s) 60, 967, 1734, 2028, 2408
BseNI ACTGG 1 cut(s) 2217
BseRI GAGGAG 3 cut(s) 365, 959, 1368
BseSI GKGCMC 1 cut(s) 2212
BsgI GTGCAG 2 cut(s) 621, 2686
Bsh1236I CGCG 1 cut(s) 385
BshFI GGCC 6 cut(s) 317, 382, 512, 2232, 2354, 2487
BshNI GGYRCC 1 cut(s) 2178
BshVI ATCGAT 1 cut(s) 2593
BsiHKAI GWGCWC 5 cut(s) 595, 961, 1660, 2011, 2212
BsiSI CCGG 3 cut(s) 1805, 1847, 2030
BslI CCNNNNNNNGG 2 cut(s) 940, 2042
BsmAI GTCTC 3 cut(s) 245, 1380, 1386
BsmI GAATGC 2 cut(s) 2405, 2471
BsnI GGCC 6 cut(s) 317, 382, 512, 2232, 2354, 2487
Bsp1286I GDGCHC 5 cut(s) 595, 961, 1660, 2011, 2212
Bsp13I TCCGGA 2 cut(s) 1804, 2029
Bsp1407I TGTACA 1 cut(s) 2454
Bsp19I CCATGG 2 cut(s) 1427, 2356
BspACI CCGC 6 cut(s) 383, 548, 912, 2268, 2425, 2661
BspANI GGCC 6 cut(s) 317, 382, 512, 2232, 2354, 2487
BspCNI CTCAG 5 cut(s) 61, 966, 1735, 2029, 2407
BspDI ATCGAT 1 cut(s) 2593
BspEI TCCGGA 2 cut(s) 1804, 2029
BspFNI CGCG 1 cut(s) 385
BspHI TCATGA 2 cut(s) 369, 1873
BspLI GGNNCC 3 cut(s) 304, 2034, 2180
BspPI GGATC 9 cut(s) 436, 743, 792, 1796, 1808, 1857, 2027, 2040, 2671
BspQI GCTCTTC 2 cut(s) 1044, 1290
BspT107I GGYRCC 1 cut(s) 2178
BspTI CTTAAG 2 cut(s) 404, 1943
BsrDI GCAATG 4 cut(s) 22, 1755, 2064, 2095
BsrGI TGTACA 1 cut(s) 2454
BsrI ACTGG 1 cut(s) 2217
BssECI CCNNGG 7 cut(s) 1132, 1427, 1608, 1984, 2313, 2356, 2466
BssNI GRCGYC 1 cut(s) 2179
BssSI CACGAG 1 cut(s) 1653
BssT1I CCWWGG 3 cut(s) 1427, 1608, 2356
Bst2BI CACGAG 1 cut(s) 1653
Bst2UI CCWGG 5 cut(s) 864, 2315, 2444, 2467, 2601
Bst4CI ACNGT 6 cut(s) 1397, 1561, 2207, 2387, 2609, 2658
Bst6I CTCTTC 3 cut(s) 135, 1044, 1290
BstACI GRCGYC 1 cut(s) 2179
BstAFI CTTAAG 2 cut(s) 404, 1943
BstAPI GCANNNNNTGC 1 cut(s) 1754
BstAUI TGTACA 1 cut(s) 2454
BstC8I GCNNGC 5 cut(s) 380, 461, 543, 1056, 1950
BstDEI CTNAG 8 cut(s) 69, 261, 346, 467, 953, 1743, 2037, 2394
BstDSI CCRYGG 3 cut(s) 1427, 1984, 2356
BstF5I GGATG 8 cut(s) 79, 151, 961, 1491, 1510, 1618, 2077, 2269
BstFNI CGCG 1 cut(s) 385
BstH2I RGCGCY 2 cut(s) 928, 2182
BstHHI GCGC 5 cut(s) 927, 1146, 2172, 2181, 2190
BstMAI GTCTC 3 cut(s) 245, 1380, 1386
BstNI CCWGG 5 cut(s) 864, 2315, 2444, 2467, 2601
BstNSI RCATGY 3 cut(s) 1058, 1144, 1629
BstSCI CCNGG 5 cut(s) 862, 2313, 2442, 2465, 2599
BstSFI CTRYAG 1 cut(s) 192
BstSLI GKGCMC 1 cut(s) 2212
BstUI CGCG 1 cut(s) 385
BstV2I GAAGAC 2 cut(s) 890, 1347
BstX2I RGATCY 2 cut(s) 1849, 2032
BstXI CCANNNNNNTGG 1 cut(s) 2483
BstYI RGATCY 2 cut(s) 1849, 2032
Bsu15I ATCGAT 1 cut(s) 2593
BsuRI GGCC 6 cut(s) 317, 382, 512, 2232, 2354, 2487
BsuTUI ATCGAT 1 cut(s) 2593
BtgI CCRYGG 3 cut(s) 1427, 1984, 2356
BtsCI GGATG 8 cut(s) 79, 151, 961, 1491, 1510, 1618, 2077, 2269
BtsI GCAGTG 1 cut(s) 2698
BtsIMutI CAGTG 7 cut(s) 878, 1164, 1185, 1566, 2383, 2663, 2698
Cac8I GCNNGC 5 cut(s) 380, 461, 543, 1056, 1950
CciI TCATGA 2 cut(s) 369, 1873
CfoI GCGC 5 cut(s) 927, 1146, 2172, 2181, 2190
Cfr13I GGNCC 1 cut(s) 2353
ClaI ATCGAT 1 cut(s) 2593
CseI GACGC 1 cut(s) 1691
CsiI ACCWGGT 1 cut(s) 2599
Csp6I GTAC 4 cut(s) 1253, 1523, 2334, 2455
CviQI GTAC 4 cut(s) 1253, 1523, 2334, 2455
DdeI CTNAG 8 cut(s) 69, 261, 346, 467, 953, 1743, 2037, 2394
DinI GGCGCC 1 cut(s) 2180
DraI TTTAAA 2 cut(s) 45, 1284
EaeI YGGCCR 1 cut(s) 2230
Eam1104I CTCTTC 3 cut(s) 135, 1044, 1290
EarI CTCTTC 3 cut(s) 135, 1044, 1290
Ecl136II GAGCTC 1 cut(s) 2009
Eco130I CCWWGG 3 cut(s) 1427, 1608, 2356
Eco24I GRGCYC 1 cut(s) 2011
Eco47III AGCGCT 1 cut(s) 926
Eco53kI GAGCTC 1 cut(s) 2009
Eco57I CTGAAG 9 cut(s) 732, 774, 797, 902, 990, 1025, 1475, 1947, 2354
EcoICRI GAGCTC 1 cut(s) 2009
EcoRII CCWGG 5 cut(s) 862, 2313, 2442, 2465, 2599
EcoT14I CCWWGG 3 cut(s) 1427, 1608, 2356
EcoT38I GRGCYC 1 cut(s) 2011
EgeI GGCGCC 1 cut(s) 2180
EheI GGCGCC 1 cut(s) 2180
ErhI CCWWGG 3 cut(s) 1427, 1608, 2356
FalI AAGNNNNNCTT 2 cut(s) 2472, 2504
FauI CCCGC 1 cut(s) 2418
FbaI TGATCA 1 cut(s) 1615
FblI GTMKAC 1 cut(s) 195
FokI GGATG 8 cut(s) 86, 158, 948, 1498, 1517, 1625, 2064, 2276
FriOI GRGCYC 1 cut(s) 2011
FspBI CTAG 5 cut(s) 21, 723, 1224, 1347, 1853
FspI TGCGCA 1 cut(s) 1145
GlaI GCGC 5 cut(s) 926, 1145, 2171, 2180, 2189
GsuI CTGGAG 2 cut(s) 962, 2107
HaeII RGCGCY 2 cut(s) 928, 2182
HaeIII GGCC 6 cut(s) 317, 382, 512, 2232, 2354, 2487
HapII CCGG 3 cut(s) 1805, 1847, 2030
HgaI GACGC 1 cut(s) 1691
HhaI GCGC 5 cut(s) 927, 1146, 2172, 2181, 2190
Hin1I GRCGYC 1 cut(s) 2179
Hin6I GCGC 5 cut(s) 925, 1144, 2170, 2179, 2188
HinP1I GCGC 5 cut(s) 925, 1144, 2170, 2179, 2188
HincII GTYRAC 1 cut(s) 1687
HindII GTYRAC 1 cut(s) 1687
HindIII AAGCTT 7 cut(s) 343, 401, 714, 1278, 1457, 1946, 2286
HpaI GTTAAC 1 cut(s) 1687
HpaII CCGG 3 cut(s) 1805, 1847, 2030
HphI GGTGA 1 cut(s) 1394
Hpy166II GTNNAC 6 cut(s) 196, 669, 1164, 1402, 1687, 2210
Hpy8I GTNNAC 6 cut(s) 196, 669, 1164, 1402, 1687, 2210
HpyAV CCTTC 4 cut(s) 307, 381, 669, 2533
HpyCH4III ACNGT 6 cut(s) 1397, 1561, 2207, 2387, 2609, 2658
HpyCH4IV ACGT 1 cut(s) 1632
HpyF3I CTNAG 8 cut(s) 69, 261, 346, 467, 953, 1743, 2037, 2394
HpySE526I ACGT 1 cut(s) 1632
Hsp92I GRCGYC 1 cut(s) 2179
HspAI GCGC 5 cut(s) 925, 1144, 2170, 2179, 2188
KasI GGCGCC 1 cut(s) 2178
Kpn2I TCCGGA 2 cut(s) 1804, 2029
Ksp22I TGATCA 1 cut(s) 1615
KspAI GTTAAC 1 cut(s) 1687
LguI GCTCTTC 2 cut(s) 1044, 1290
LmnI GCTCC 2 cut(s) 890, 2006
LweI GCATC 4 cut(s) 1476, 1495, 2086, 2254
MabI ACCWGGT 1 cut(s) 2599
MaeI CTAG 5 cut(s) 21, 723, 1224, 1347, 1853
MaeII ACGT 1 cut(s) 1632
MaeIII GTNAC 6 cut(s) 1181, 1628, 1899, 2147, 2491, 2603
MflI RGATCY 2 cut(s) 1849, 2032
MhlI GDGCHC 5 cut(s) 595, 961, 1660, 2011, 2212
MlsI TGGCCA 1 cut(s) 2232
MluNI TGGCCA 1 cut(s) 2232
Mly113I GGCGCC 1 cut(s) 2179
MlyI GAGTC 3 cut(s) 1337, 1608, 2488
MmeI TCCRAC 2 cut(s) 762, 989
Mox20I TGGCCA 1 cut(s) 2232
MroI TCCGGA 2 cut(s) 1804, 2029
MroXI GAANNNNTTC 2 cut(s) 1038, 2520
MscI TGGCCA 1 cut(s) 2232
MslI CAYNNNNRTG 4 cut(s) 1429, 1432, 2262, 2534
Msp20I TGGCCA 1 cut(s) 2232
MspA1I CMGCKG 1 cut(s) 746
MspCI CTTAAG 2 cut(s) 404, 1943
MspI CCGG 3 cut(s) 1805, 1847, 2030
MspR9I CCNGG 5 cut(s) 864, 2315, 2444, 2467, 2601
Mva1269I GAATGC 2 cut(s) 2405, 2471
MvaI CCWGG 5 cut(s) 864, 2315, 2444, 2467, 2601
MvnI CGCG 1 cut(s) 385
NarI GGCGCC 1 cut(s) 2179
NcoI CCATGG 2 cut(s) 1427, 2356
NlaIV GGNNCC 3 cut(s) 304, 2034, 2180
NmuCI GTSAC 3 cut(s) 1899, 2147, 2491
NsbI TGCGCA 1 cut(s) 1145
NspI RCATGY 3 cut(s) 1058, 1144, 1629
OliI CACNNNNGTG 1 cut(s) 1429
PaeI GCATGC 1 cut(s) 1058
PagI TCATGA 2 cut(s) 369, 1873
PciI ACATGT 1 cut(s) 1625
PciSI GCTCTTC 2 cut(s) 1044, 1290
PctI GAATGC 2 cut(s) 2405, 2471
PdmI GAANNNNTTC 2 cut(s) 1038, 2520
PfeI GAWTC 9 cut(s) 131, 188, 560, 1529, 1790, 1870, 1939, 1999, 2308
PflMI CCANNNNNTGG 1 cut(s) 940
PleI GAGTC 3 cut(s) 1337, 1607, 2488
PluTI GGCGCC 1 cut(s) 2182
PpsI GAGTC 3 cut(s) 1337, 1607, 2488
PscI ACATGT 1 cut(s) 1625
PshBI ATTAAT 2 cut(s) 359, 674
PsiI TTATAA 2 cut(s) 2160, 2292
Psp124BI GAGCTC 1 cut(s) 2011
Psp1406I AACGTT 1 cut(s) 1632
Psp6I CCWGG 5 cut(s) 862, 2313, 2442, 2465, 2599
PspGI CCWGG 5 cut(s) 862, 2313, 2442, 2465, 2599
PspN4I GGNNCC 3 cut(s) 304, 2034, 2180
PspPI GGNCC 1 cut(s) 2353
PsuI RGATCY 2 cut(s) 1849, 2032
PvuII CAGCTG 1 cut(s) 746
RsaI GTAC 4 cut(s) 1254, 1524, 2335, 2456
RsaNI GTAC 4 cut(s) 1253, 1523, 2334, 2455
RseI CAYNNNNRTG 4 cut(s) 1429, 1432, 2262, 2534
SacI GAGCTC 1 cut(s) 2011
SapI GCTCTTC 2 cut(s) 1044, 1290
Sau96I GGNCC 1 cut(s) 2353
SchI GAGTC 3 cut(s) 1337, 1608, 2488
ScrFI CCNGG 5 cut(s) 864, 2315, 2444, 2467, 2601
SduI GDGCHC 5 cut(s) 595, 961, 1660, 2011, 2212
SexAI ACCWGGT 1 cut(s) 2599
SfaNI GCATC 4 cut(s) 1476, 1495, 2086, 2254
SfcI CTRYAG 1 cut(s) 192
SfoI GGCGCC 1 cut(s) 2180
SmiMI CAYNNNNRTG 4 cut(s) 1429, 1432, 2262, 2534
SmlI CTYRAG 5 cut(s) 404, 1094, 1706, 1943, 2689
SmoI CTYRAG 5 cut(s) 404, 1094, 1706, 1943, 2689
SphI GCATGC 1 cut(s) 1058
SsiI CCGC 6 cut(s) 383, 548, 912, 2268, 2425, 2661
SspDI GGCGCC 1 cut(s) 2178
SspMI CTAG 5 cut(s) 21, 723, 1224, 1347, 1853
SstI GAGCTC 1 cut(s) 2011
StyD4I CCNGG 5 cut(s) 862, 2313, 2442, 2465, 2599
StyI CCWWGG 3 cut(s) 1427, 1608, 2356
TaaI ACNGT 6 cut(s) 1397, 1561, 2207, 2387, 2609, 2658
TaiI ACGT 1 cut(s) 1635
TaqI TCGA 7 cut(s) 478, 719, 731, 1312, 1390, 2593, 2680
TatI WGTACW 2 cut(s) 1252, 2454
TauI GCSGC 2 cut(s) 385, 2270
TfiI GAWTC 9 cut(s) 131, 188, 560, 1529, 1790, 1870, 1939, 1999, 2308
TscAI CASTG 7 cut(s) 885, 1171, 1192, 1566, 2390, 2663, 2705
TseFI GTSAC 3 cut(s) 1899, 2147, 2491
Tsp45I GTSAC 3 cut(s) 1899, 2147, 2491
TspGWI ACGGA 3 cut(s) 295, 1782, 1973
TspRI CASTG 7 cut(s) 885, 1171, 1192, 1566, 2390, 2663, 2705
Van91I CCANNNNNTGG 1 cut(s) 940
Vha464I CTTAAG 2 cut(s) 404, 1943
VneI GTGCAC 1 cut(s) 2208
VspI ATTAAT 2 cut(s) 359, 674
XapI RAATTY 5 cut(s) 219, 1116, 1169, 1190, 2162
XbaI TCTAGA 1 cut(s) 1346
XceI RCATGY 3 cut(s) 1058, 1144, 1629
XcmI CCANNNNNNNNNTGG 2 cut(s) 593, 860
XmiI GTMKAC 1 cut(s) 195
XmnI GAANNNNTTC 2 cut(s) 1038, 2520
XspI CTAG 5 cut(s) 21, 723, 1224, 1347, 1853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.