Rw6G030630

General transcription factor 3C polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0001600
Physical Location & Seq
Reverse (-)
54712498 .. 54715514
3017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G030630.1

Sequence Viewer

Length: 2709 bp
ATGGATAAAAACGGCAATGCTAGTTTTGATTGTGGGGAGGCTTTAAAGTATGTGTTTGATTTGGGTGCTGAGGATGACATTATAGAAGATGAGGAAGAAGAAGATGATGATGATGATAGTGATGAAGAATCCGAAGAAGAGGATGAGGAAGAAGAAGAAGAAGATGACACCTTTACTCCTTTGGATTCTGTAGACGATGGTTCTTTTGCTGACCAAATTTACCCAGATTTTGTGGGGCAGGAGTATGAGACTTTAGCTAAGAAAAAACGAAAACCGCTTGGGGATAGTCGCCCTAAAGGTTCAGTTAAGAAGGCCAGAAAAGATGAGGGTTCTAAACAAAGCTTAGAGGAGGAATTAATGGCGTTCATGATGGGCAGGCCGCGAAGGAGTTCAAGGAAGCTTAAGAAAAGAGGTAGAAGAAAAGGATCAAAGAACCAATGCAGCCCTGAAATTAGCAGGCTTCTTAGTAAGGCTCGAAATTGCTATGCACTTGGGGATTACAAAGAGGCCGTACCCATCTTGAAAGAAGTGATTAAGCAAGCACCGCATTTGCCCGATTCCTATCAGACACTTGGAGATGTCCATAGTGCTCTTGGCGATAAAAATAGAGCCTTAAATTGCTACCATGTTGCTGGACATTTAGCACCGAAAAATCCTTCTTTGTGGACGTTAATTTTTACAAAGTTCATGGAAGTAGGGAACATTTCTGAAGCTTCGACTAGCCTTTCGAGAGCAATATCAGCTGATCCTGAAGCCGAAAATGTTGTTGCTCTGAAGTTGGATCGTGCTTCACTCCATGTTCAGCTTAAAGATTATGAAAAAGCTGCTGCATTGTATGAAGAAATAATCCAAACCTGTCCTGGTAATGTTAAAGCACTGAAAACAGGAGCAGAGATGTATGAAAAATGCGGTCAGCGTGAGCGCTCTATCCATGTGCTGGAGGAGTATCTCAGAGCACATCCAACTGAAGCTGATTTGAGTGTCATTGATTTGTTAGTTTCTCTACTTATGGAAAACAATTTACATAATGAAGCTCTTCAGCATATTGAGCATGCACAACTGACACTCCATTCGGGAAAAGAGCTGCCTCTTGAGATGAAAGTTAAAGCAGGAATTTGCCAAGCTAACGTCGGAAACATGCGCAAGGCAGCAAGTCTGTTTACTGAATTTGCAGAGAGTAACACTGAATTTAATAAAGGTTTTTTACATTTGAAAATTGCTAGATGTTATTTGTCCTTGAAGTATAGAGTACAAGCAATTTTCTACTTCTACCAAGCTTTAAAGACACTTGAAGAGCATATTGAGGCTCGATTGACATTGGCTTCTGTTCTCCTTGAAGAATCTAGAGATGATGAAGCTATGTCTCTGCTGTCTCCTCCAAGAAATCTCGACTGTGTTCACCTCCCAACTGATAAAGCAACACCATGGTGGTGTGATGGAAAAGTGAAGCTGAAGCTTTGCAACATTTTCAGAGCTAAAGGGATGCACAAGGAACTTGTGGATGCAATCTATGATTTGGTACACGAATCATTACAGATTATATCACTTGGGAGAACAGTGAAAAGGAAACTCTTGAAAAAGGAATTGTTAGAAAGAGTCAAAGCCTTGGATGATCAGCAAACATGTAACGTTTTTTCGGGAAATAGATCACGAGCACTTCCTTTGCCAGATCATCGGAAAGTTAACAGAGAAAAGAAGCGTCTTGAGGAAAAGGCAAAACTAAAGGAGGAAAAGAGAACTGAGGCAATGGCTGCTGGACATGACGGACAAAGTGATGATTATTCAGATTCAGATGATGATGCTGAAATTGATCCACAAGAAATACAGAAAGAGCCTCCCCTGCCGGATCTAGTCAAGGAAAAAGAGAATCATGACCTCATATTAGATTTGTGCAAGTCACTCGCTTCCTTGAATAGACATTCTGAAGCGTTGAAGATTCTTAAGCTTGCTTTGAAATCAAGTAAAGGCATGGCAGCTTTCCGTGGGAAACTTCGGACTCTTGGAGCTCAAATAGCATACACTGATCCGGATCCTGAGCAGGGGTTGAACTATGTAAAATACATTGCAGACCAGCATCCATACAGCAATGCTGTCTGGAATTGCTATTACAAAGTAATCTCCAGATTTAAGGAGGATTGGTATCGTGACAAGCATTATAAATTTGTGCGCCACAGGCGCCATAGGCGCAACAAATTAAAAGACTGCGCACCACCCAGTATCATAAGTGGCCATCATTATACAAGAAAAAGTCGCCATCAGGATGCCGCAAGAGAATACCTTGAAGCTTATAAGTTATTGCCAGAGAATCCCCTGGTTAATCTGTGTGCTGGTACTGCCTTAATCAACTTGGCCCATGGACATAGACTTCAGAATAAGCACCACTGTATTGCTCAGGGCTTTGCATTCCTCTACAACAATTTGCGGGTTTGCAAAAGCAGCCAGGAGGCTTTGTACAACATAGCCAGGGCATTCCATCAAGTTGGCCTTGTGACTCTGGCAGCTTCCTACTACGAAAAAGTTCTTGACATTCATGTGAAGGACTACCCCATACCAAAACTTCCCCATGAAAATCCAGACTACAATCAAAATCGATTACCAGGTTACTGTGATCTTCGCAGAGAAGCAGCTTTTAATCTACATCTTATCTACAAACAGTGTGGATCATTTGATCTTGCTCGACAGGTCTTGAGAGATCACTGCACCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_19 TPR_6 TPR_7 TPR_8

Protein Analysis

902

Amino Acids

103.02

Weight (kDa)

6.44

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_19 PF14559 163 - 224 1.5e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2157, 2289
Acc16I TGCGCA 2 cut(s) 1142, 2206
AccB1I GGYRCC 1 cut(s) 2175
AccB7I CCANNNNNTGG 1 cut(s) 937
AccI GTMKAC 1 cut(s) 192
AccII CGCG 1 cut(s) 382
AccIII TCCGGA 1 cut(s) 2026
AciI CCGC 6 cut(s) 275, 380, 545, 909, 2265, 2422
AclI AACGTT 1 cut(s) 1629
AclWI GGATC 9 cut(s) 433, 740, 789, 1805, 1854, 2018, 2024, 2037, 2668
AcoI YGGCCR 1 cut(s) 2227
AcsI RAATTY 5 cut(s) 216, 1113, 1166, 1187, 2159
AcuI CTGAAG 8 cut(s) 729, 771, 794, 987, 1022, 1472, 1944, 2351
AcyI GRCGYC 1 cut(s) 2176
AfaI GTAC 5 cut(s) 513, 1251, 1521, 2332, 2453
AfeI AGCGCT 1 cut(s) 923
AfiI CCNNNNNNNGG 2 cut(s) 937, 2039
AflII CTTAAG 2 cut(s) 401, 1940
AflIII ACRYGT 1 cut(s) 1622
AjnI CCWGG 5 cut(s) 859, 2310, 2439, 2462, 2596
AleI CACNNNNGTG 1 cut(s) 1426
Alw21I GWGCWC 4 cut(s) 592, 958, 1657, 2008
Alw26I GTCTC 3 cut(s) 242, 1368, 1377
AlwI GGATC 9 cut(s) 433, 740, 789, 1805, 1854, 2018, 2024, 2037, 2668
Aor13HI TCCGGA 1 cut(s) 2026
Aor51HI AGCGCT 1 cut(s) 923
AoxI GGCC 6 cut(s) 312, 377, 507, 2227, 2349, 2482
ApoI RAATTY 5 cut(s) 216, 1113, 1166, 1187, 2159
ArsI GACNNNNNNTTYG 4 cut(s) 709, 741, 1054, 1086
AseI ATTAAT 1 cut(s) 356
Asp700I GAANNNNTTC 3 cut(s) 388, 1035, 2517
AspLEI GCGC 6 cut(s) 924, 1143, 2169, 2178, 2187, 2207
AspS9I GGNCC 1 cut(s) 2350
AsuHPI GGTGA 1 cut(s) 1391
BalI TGGCCA 1 cut(s) 2229
BamHI GGATCC 1 cut(s) 2029
BanI GGYRCC 1 cut(s) 2175
BanII GRGCYC 1 cut(s) 2008
BauI CACGAG 1 cut(s) 1650
Bbv12I GWGCWC 4 cut(s) 592, 958, 1657, 2008
BbvCI CCTCAGC 1 cut(s) 69
BccI CCATC 7 cut(s) 191, 364, 524, 1430, 2238, 2262, 2481
BceAI ACGGC 2 cut(s) 28, 494
BcgI CGANNNNNNTGC 2 cut(s) 1882, 1916
BciT130I CCWGG 5 cut(s) 861, 2312, 2441, 2464, 2598
BclI TGATCA 1 cut(s) 1612
BcoDI GTCTC 3 cut(s) 242, 1368, 1377
BfaI CTAG 5 cut(s) 21, 720, 1221, 1344, 1850
BfmI CTRYAG 1 cut(s) 189
BfoI RGCGCY 2 cut(s) 925, 2179
BfrI CTTAAG 2 cut(s) 401, 1940
Bme1390I CCNGG 5 cut(s) 861, 2312, 2441, 2464, 2598
BmgT120I GGNCC 1 cut(s) 2350
BmiI GGNNCC 2 cut(s) 2031, 2177
BmrFI CCNGG 5 cut(s) 861, 2312, 2441, 2464, 2598
BmrI ACTGGG 1 cut(s) 2208
BmsI GCATC 5 cut(s) 1473, 1492, 1789, 2083, 2251
BmuI ACTGGG 1 cut(s) 2208
BpmI CTGGAG 2 cut(s) 959, 2104
Bpu10I CCTNAGC 3 cut(s) 69, 2034, 2391
BpuEI CTTGAG 3 cut(s) 1112, 1724, 2707
Bsa29I ATCGAT 1 cut(s) 2590
BsaBI GATNNNNATC 3 cut(s) 561, 2028, 2139
BsaHI GRCGYC 1 cut(s) 2176
BsaJI CCNNGG 6 cut(s) 1424, 1605, 1981, 2310, 2353, 2463
BsaWI WCCGGW 1 cut(s) 2026
BsaXI ACNNNNNCTCC 8 cut(s) 160, 190, 1050, 1080, 2123, 2153, 2435, 2465
Bsc4I CCNNNNNNNGG 2 cut(s) 937, 2039
Bse1I ACTGG 1 cut(s) 2214
Bse3DI GCAATG 4 cut(s) 22, 1752, 2061, 2092
Bse8I GATNNNNATC 3 cut(s) 561, 2028, 2139
BseAI TCCGGA 1 cut(s) 2026
BseBI CCWGG 5 cut(s) 861, 2312, 2441, 2464, 2598
BseCI ATCGAT 1 cut(s) 2590
BseDI CCNNGG 6 cut(s) 1424, 1605, 1981, 2310, 2353, 2463
BseGI GGATG 8 cut(s) 79, 148, 958, 1488, 1507, 1615, 2074, 2266
BseJI GATNNNNATC 3 cut(s) 561, 2028, 2139
BseLI CCNNNNNNNGG 2 cut(s) 937, 2039
BseMI GCAATG 4 cut(s) 22, 1752, 2061, 2092
BseMII CTCAG 5 cut(s) 60, 964, 1731, 2025, 2405
BseNI ACTGG 1 cut(s) 2214
BseRI GAGGAG 3 cut(s) 362, 956, 1365
BsgI GTGCAG 1 cut(s) 2683
Bsh1236I CGCG 1 cut(s) 382
BshFI GGCC 6 cut(s) 314, 379, 509, 2229, 2351, 2484
BshNI GGYRCC 1 cut(s) 2175
BshVI ATCGAT 1 cut(s) 2590
BsiHKAI GWGCWC 4 cut(s) 592, 958, 1657, 2008
BsiSI CCGG 2 cut(s) 1844, 2027
BslI CCNNNNNNNGG 2 cut(s) 937, 2039
BsmAI GTCTC 3 cut(s) 242, 1368, 1377
BsmI GAATGC 2 cut(s) 2402, 2468
BsnI GGCC 6 cut(s) 314, 379, 509, 2229, 2351, 2484
Bsp1286I GDGCHC 4 cut(s) 592, 958, 1657, 2008
Bsp13I TCCGGA 1 cut(s) 2026
Bsp1407I TGTACA 1 cut(s) 2451
Bsp19I CCATGG 2 cut(s) 1424, 2353
BspACI CCGC 6 cut(s) 275, 380, 545, 909, 2265, 2422
BspANI GGCC 6 cut(s) 314, 379, 509, 2229, 2351, 2484
BspCNI CTCAG 5 cut(s) 61, 963, 1732, 2026, 2404
BspDI ATCGAT 1 cut(s) 2590
BspEI TCCGGA 1 cut(s) 2026
BspFNI CGCG 1 cut(s) 382
BspHI TCATGA 2 cut(s) 366, 1870
BspLI GGNNCC 2 cut(s) 2031, 2177
BspPI GGATC 9 cut(s) 433, 740, 789, 1805, 1854, 2018, 2024, 2037, 2668
BspQI GCTCTTC 2 cut(s) 1041, 1287
BspT107I GGYRCC 1 cut(s) 2175
BspTI CTTAAG 2 cut(s) 401, 1940
BsrDI GCAATG 4 cut(s) 22, 1752, 2061, 2092
BsrGI TGTACA 1 cut(s) 2451
BsrI ACTGG 1 cut(s) 2214
BssECI CCNNGG 6 cut(s) 1424, 1605, 1981, 2310, 2353, 2463
BssNI GRCGYC 1 cut(s) 2176
BssSI CACGAG 1 cut(s) 1650
BssT1I CCWWGG 3 cut(s) 1424, 1605, 2353
Bst2BI CACGAG 1 cut(s) 1650
Bst2UI CCWGG 5 cut(s) 861, 2312, 2441, 2464, 2598
Bst4CI ACNGT 5 cut(s) 1394, 1558, 2384, 2606, 2655
Bst6I CTCTTC 3 cut(s) 132, 1041, 1287
BstACI GRCGYC 1 cut(s) 2176
BstAFI CTTAAG 2 cut(s) 401, 1940
BstAPI GCANNNNNTGC 1 cut(s) 1751
BstAUI TGTACA 1 cut(s) 2451
BstC8I GCNNGC 5 cut(s) 377, 458, 540, 1053, 1947
BstDEI CTNAG 8 cut(s) 69, 258, 343, 464, 950, 1740, 2034, 2391
BstDSI CCRYGG 3 cut(s) 1424, 1981, 2353
BstF5I GGATG 8 cut(s) 79, 148, 958, 1488, 1507, 1615, 2074, 2266
BstFNI CGCG 1 cut(s) 382
BstH2I RGCGCY 2 cut(s) 925, 2179
BstHHI GCGC 6 cut(s) 924, 1143, 2169, 2178, 2187, 2207
BstMAI GTCTC 3 cut(s) 242, 1368, 1377
BstNI CCWGG 5 cut(s) 861, 2312, 2441, 2464, 2598
BstNSI RCATGY 3 cut(s) 1055, 1141, 1626
BstSCI CCNGG 5 cut(s) 859, 2310, 2439, 2462, 2596
BstSFI CTRYAG 1 cut(s) 189
BstUI CGCG 1 cut(s) 382
BstX2I RGATCY 2 cut(s) 1846, 2029
BstXI CCANNNNNNTGG 2 cut(s) 632, 2480
BstYI RGATCY 2 cut(s) 1846, 2029
Bsu15I ATCGAT 1 cut(s) 2590
BsuRI GGCC 6 cut(s) 314, 379, 509, 2229, 2351, 2484
BsuTUI ATCGAT 1 cut(s) 2590
BtgI CCRYGG 3 cut(s) 1424, 1981, 2353
BtsCI GGATG 8 cut(s) 79, 148, 958, 1488, 1507, 1615, 2074, 2266
BtsI GCAGTG 1 cut(s) 2695
BtsIMutI CAGTG 7 cut(s) 875, 1182, 1563, 2019, 2380, 2660, 2695
Cac8I GCNNGC 5 cut(s) 377, 458, 540, 1053, 1947
CciI TCATGA 2 cut(s) 366, 1870
CfoI GCGC 6 cut(s) 924, 1143, 2169, 2178, 2187, 2207
Cfr13I GGNCC 1 cut(s) 2350
ClaI ATCGAT 1 cut(s) 2590
CseI GACGC 1 cut(s) 1688
CsiI ACCWGGT 1 cut(s) 2596
Csp6I GTAC 5 cut(s) 512, 1250, 1520, 2331, 2452
CspCI CAANNNNNGTGG 2 cut(s) 2638, 2673
CviQI GTAC 5 cut(s) 512, 1250, 1520, 2331, 2452
DdeI CTNAG 8 cut(s) 69, 258, 343, 464, 950, 1740, 2034, 2391
DinI GGCGCC 1 cut(s) 2177
DraI TTTAAA 2 cut(s) 45, 1281
EaeI YGGCCR 1 cut(s) 2227
Eam1104I CTCTTC 3 cut(s) 132, 1041, 1287
EarI CTCTTC 3 cut(s) 132, 1041, 1287
Ecl136II GAGCTC 1 cut(s) 2006
Eco130I CCWWGG 3 cut(s) 1424, 1605, 2353
Eco24I GRGCYC 1 cut(s) 2008
Eco47III AGCGCT 1 cut(s) 923
Eco53kI GAGCTC 1 cut(s) 2006
Eco57I CTGAAG 8 cut(s) 729, 771, 794, 987, 1022, 1472, 1944, 2351
EcoICRI GAGCTC 1 cut(s) 2006
EcoRII CCWGG 5 cut(s) 859, 2310, 2439, 2462, 2596
EcoT14I CCWWGG 3 cut(s) 1424, 1605, 2353
EcoT38I GRGCYC 1 cut(s) 2008
EgeI GGCGCC 1 cut(s) 2177
EheI GGCGCC 1 cut(s) 2177
ErhI CCWWGG 3 cut(s) 1424, 1605, 2353
FalI AAGNNNNNCTT 2 cut(s) 2469, 2501
FauI CCCGC 1 cut(s) 2415
FbaI TGATCA 1 cut(s) 1612
FblI GTMKAC 1 cut(s) 192
FokI GGATG 8 cut(s) 86, 155, 945, 1495, 1514, 1622, 2061, 2273
FriOI GRGCYC 1 cut(s) 2008
FspBI CTAG 5 cut(s) 21, 720, 1221, 1344, 1850
FspI TGCGCA 2 cut(s) 1142, 2206
GlaI GCGC 6 cut(s) 923, 1142, 2168, 2177, 2186, 2206
GsuI CTGGAG 2 cut(s) 959, 2104
HaeII RGCGCY 2 cut(s) 925, 2179
HaeIII GGCC 6 cut(s) 314, 379, 509, 2229, 2351, 2484
HapII CCGG 2 cut(s) 1844, 2027
HgaI GACGC 1 cut(s) 1688
HhaI GCGC 6 cut(s) 924, 1143, 2169, 2178, 2187, 2207
Hin1I GRCGYC 1 cut(s) 2176
Hin6I GCGC 6 cut(s) 922, 1141, 2167, 2176, 2185, 2205
HinP1I GCGC 6 cut(s) 922, 1141, 2167, 2176, 2185, 2205
HincII GTYRAC 1 cut(s) 1684
HindII GTYRAC 1 cut(s) 1684
HindIII AAGCTT 7 cut(s) 340, 398, 711, 1275, 1454, 1943, 2283
HpaI GTTAAC 1 cut(s) 1684
HpaII CCGG 2 cut(s) 1844, 2027
HphI GGTGA 1 cut(s) 1391
Hpy166II GTNNAC 6 cut(s) 193, 666, 1161, 1399, 1522, 1684
Hpy8I GTNNAC 6 cut(s) 193, 666, 1161, 1399, 1522, 1684
Hpy99I CGWCG 1 cut(s) 1133
HpyAV CCTTC 4 cut(s) 304, 378, 666, 2530
HpyCH4III ACNGT 5 cut(s) 1394, 1558, 2384, 2606, 2655
HpyCH4IV ACGT 3 cut(s) 668, 1128, 1629
HpyF3I CTNAG 8 cut(s) 69, 258, 343, 464, 950, 1740, 2034, 2391
HpySE526I ACGT 3 cut(s) 668, 1128, 1629
Hsp92I GRCGYC 1 cut(s) 2176
HspAI GCGC 6 cut(s) 922, 1141, 2167, 2176, 2185, 2205
KasI GGCGCC 1 cut(s) 2175
Kpn2I TCCGGA 1 cut(s) 2026
Ksp22I TGATCA 1 cut(s) 1612
KspAI GTTAAC 1 cut(s) 1684
LguI GCTCTTC 2 cut(s) 1041, 1287
LmnI GCTCC 2 cut(s) 887, 2003
LweI GCATC 5 cut(s) 1473, 1492, 1789, 2083, 2251
MabI ACCWGGT 1 cut(s) 2596
MaeI CTAG 5 cut(s) 21, 720, 1221, 1344, 1850
MaeII ACGT 3 cut(s) 668, 1128, 1629
MaeIII GTNAC 6 cut(s) 1178, 1625, 1896, 2144, 2488, 2600
MflI RGATCY 2 cut(s) 1846, 2029
MhlI GDGCHC 4 cut(s) 592, 958, 1657, 2008
MlsI TGGCCA 1 cut(s) 2229
MluNI TGGCCA 1 cut(s) 2229
Mly113I GGCGCC 1 cut(s) 2176
MlyI GAGTC 3 cut(s) 1605, 1990, 2485
MmeI TCCRAC 3 cut(s) 759, 986, 1111
Mox20I TGGCCA 1 cut(s) 2229
MroI TCCGGA 1 cut(s) 2026
MroXI GAANNNNTTC 3 cut(s) 388, 1035, 2517
MscI TGGCCA 1 cut(s) 2229
MslI CAYNNNNRTG 4 cut(s) 1426, 1429, 2259, 2531
Msp20I TGGCCA 1 cut(s) 2229
MspA1I CMGCKG 1 cut(s) 743
MspCI CTTAAG 2 cut(s) 401, 1940
MspI CCGG 2 cut(s) 1844, 2027
MspR9I CCNGG 5 cut(s) 861, 2312, 2441, 2464, 2598
Mva1269I GAATGC 2 cut(s) 2402, 2468
MvaI CCWGG 5 cut(s) 861, 2312, 2441, 2464, 2598
MvnI CGCG 1 cut(s) 382
NarI GGCGCC 1 cut(s) 2176
NcoI CCATGG 2 cut(s) 1424, 2353
NlaIV GGNNCC 2 cut(s) 2031, 2177
NmuCI GTSAC 3 cut(s) 1896, 2144, 2488
NsbI TGCGCA 2 cut(s) 1142, 2206
NspI RCATGY 3 cut(s) 1055, 1141, 1626
OliI CACNNNNGTG 1 cut(s) 1426
PaeI GCATGC 1 cut(s) 1055
PagI TCATGA 2 cut(s) 366, 1870
PciI ACATGT 1 cut(s) 1622
PciSI GCTCTTC 2 cut(s) 1041, 1287
PctI GAATGC 2 cut(s) 2402, 2468
PdmI GAANNNNTTC 3 cut(s) 388, 1035, 2517
PfeI GAWTC 9 cut(s) 128, 185, 557, 1340, 1526, 1787, 1867, 1936, 2305
PflMI CCANNNNNTGG 1 cut(s) 937
PleI GAGTC 3 cut(s) 1604, 1990, 2485
PluTI GGCGCC 1 cut(s) 2179
PpsI GAGTC 3 cut(s) 1604, 1990, 2485
PscI ACATGT 1 cut(s) 1622
PshBI ATTAAT 1 cut(s) 356
PsiI TTATAA 2 cut(s) 2157, 2289
Psp124BI GAGCTC 1 cut(s) 2008
Psp1406I AACGTT 1 cut(s) 1629
Psp6I CCWGG 5 cut(s) 859, 2310, 2439, 2462, 2596
PspGI CCWGG 5 cut(s) 859, 2310, 2439, 2462, 2596
PspN4I GGNNCC 2 cut(s) 2031, 2177
PspPI GGNCC 1 cut(s) 2350
PsuI RGATCY 2 cut(s) 1846, 2029
PvuII CAGCTG 1 cut(s) 743
RsaI GTAC 5 cut(s) 513, 1251, 1521, 2332, 2453
RsaNI GTAC 5 cut(s) 512, 1250, 1520, 2331, 2452
RseI CAYNNNNRTG 4 cut(s) 1426, 1429, 2259, 2531
SacI GAGCTC 1 cut(s) 2008
SapI GCTCTTC 2 cut(s) 1041, 1287
Sau96I GGNCC 1 cut(s) 2350
SchI GAGTC 3 cut(s) 1605, 1990, 2485
ScrFI CCNGG 5 cut(s) 861, 2312, 2441, 2464, 2598
SduI GDGCHC 4 cut(s) 592, 958, 1657, 2008
SexAI ACCWGGT 1 cut(s) 2596
SfaNI GCATC 5 cut(s) 1473, 1492, 1789, 2083, 2251
SfcI CTRYAG 1 cut(s) 189
SfoI GGCGCC 1 cut(s) 2177
SmiMI CAYNNNNRTG 4 cut(s) 1426, 1429, 2259, 2531
SmlI CTYRAG 5 cut(s) 401, 1091, 1703, 1940, 2686
SmoI CTYRAG 5 cut(s) 401, 1091, 1703, 1940, 2686
SphI GCATGC 1 cut(s) 1055
SsiI CCGC 6 cut(s) 275, 380, 545, 909, 2265, 2422
SspDI GGCGCC 1 cut(s) 2175
SspMI CTAG 5 cut(s) 21, 720, 1221, 1344, 1850
SstI GAGCTC 1 cut(s) 2008
StyD4I CCNGG 5 cut(s) 859, 2310, 2439, 2462, 2596
StyI CCWWGG 3 cut(s) 1424, 1605, 2353
TaaI ACNGT 5 cut(s) 1394, 1558, 2384, 2606, 2655
TaiI ACGT 3 cut(s) 671, 1131, 1632
TaqI TCGA 7 cut(s) 475, 716, 728, 1309, 1389, 2590, 2677
TatI WGTACW 2 cut(s) 1249, 2451
TauI GCSGC 2 cut(s) 382, 2267
TfiI GAWTC 9 cut(s) 128, 185, 557, 1340, 1526, 1787, 1867, 1936, 2305
TscAI CASTG 7 cut(s) 882, 1189, 1563, 2026, 2387, 2660, 2702
TseFI GTSAC 3 cut(s) 1896, 2144, 2488
Tsp45I GTSAC 3 cut(s) 1896, 2144, 2488
TspGWI ACGGA 2 cut(s) 1779, 1970
TspRI CASTG 7 cut(s) 882, 1189, 1563, 2026, 2387, 2660, 2702
Van91I CCANNNNNTGG 1 cut(s) 937
Vha464I CTTAAG 2 cut(s) 401, 1940
VspI ATTAAT 1 cut(s) 356
XapI RAATTY 5 cut(s) 216, 1113, 1166, 1187, 2159
XbaI TCTAGA 1 cut(s) 1343
XceI RCATGY 3 cut(s) 1055, 1141, 1626
XcmI CCANNNNNNNNNTGG 2 cut(s) 590, 857
XmiI GTMKAC 1 cut(s) 192
XmnI GAANNNNTTC 3 cut(s) 388, 1035, 2517
XspI CTAG 5 cut(s) 21, 720, 1221, 1344, 1850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.