Rh6AG352000

General transcription factor 3C polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001600
Physical Location & Seq
Reverse (-)
55086219 .. 55088933
2715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG352000.1

Sequence Viewer

Length: 2715 bp
ATGGATAAAAACGGCAATGCTAGTTGTGATCGTGGGGAGGCTTTAAAGTATGTGTTTGATTTGGGTGCTGAGGATGACATTATAGAAGATGAGGAAGAAGAAGAAGATGATGATGATGATAGTGATGAAGAATCCGAAGAAGAGGATGAGGAAGAAGAAGAAGAAGAAGATGACACCTTTGCTCCTTTGGATTCTGTAGACGATGGTTCTTTTGCTGACCAAATTTACCCAGATTTTGTGGGGCAGGAGTATGAGACTTTAGCTAAGAAAAAACGAAAACCACTTGGGGATAGTCGCCCTAAAGGTTCAGTTAAGAAGGCCAGAAAAGATGAGGGTTCTAAACAAAGCTTAGAGGAGGAATTAATGGCGTTCATGATGGGCAGGCCGCGAAGGAGATCAAGGAAGCTTAAGAAAAGAGGTAGAAGAAAAGGATCAAAGAACCAATGCAGCCCTGAAATTAGCAGGCTTCTTAGTAAGGCTCGAAATTGCTATGCACTTGGGGATTACAAAGAGGCCGTACCCTTCTTGAAAGAAGTGATTAAGCAAGCACCGCATTTGCCCGATTCCTATCAGACACTTGGAGATGTCCATAGTGCTCTTGGCGATAAAAATAGAGCCTTAAATTGCTACCATGTTGCTGGACATTTAGCACCGAAAAATCCTTCTTTGTGGACGTTAATTTTTACAAAGTTCATGGAAGTAGGGAACATTTCTGAAGCTTCGACTAGCCTTTCGAGAGCAATATCAGCTGATCCTGAAGCCGAAAATGTTGTTGCTCTGAAGTTGGATCGTGCTTCACTCCATGTTCAGCTTAAAGATTATGAAAAAGCTGCTGCATTGTATGAAGAAATAATCCAAACCTGTCCTGGTAATGTTAAAGCACTGAAAACAGGAGCAGAGATGTATGAAAAATGCGGTCAGCGTGAGCGCTCTATCCATGTGCTGGAGGAGTATCTCAGAGCACATCCAACTGAAGCTGATTTGAGTGTCATTGATTTGTTAGTTTCTCTACTTATGGAAAACAATTTACATAATGAAGCTCTTCAGCATATTGAGCATGCACAACTGACACTCCATTCGGGAAAAGAGCTGCCTCTTGAGATGAAAGTTAAAGCAGGAATTTGCCAAGCTAACGTCGGAAACATGCGCAAGGCAGCAAGTCTGTTTACTGAATTTGCAGAGAGTAACACTGAATTTAATAAAGGTTTTTTACATTTGAAAATTGCTAGATGTTATTTGTCCTTGAAGTATAGAGTACAAGCAATTTTCTACTTCTACCAAGCTTTAAAGACACTTGAAGAGCATATTGAGGCTCGATTGACATTGGCTTCTGTTCTCCTTGAAGAATCTAGAGATGATGAAGCTATGTCTCTGCTGTCTCCTCCAAGAAATCTCGACTGTGTTCACCTCCCAACTGATAAAGCAACACCATGGTGGTGTGATGGAAAAGTGAAGCTGAAGCTTTGCAACATTTTCAGAGCTAAAGGGATGCACAAGGAACTTGTGGATGCAATCTATGATTTGGTACACGAATCATTACAGATTATATCACTTGGGAGAACAGTGAAAAGGAAACTCTTGAAAAAGGAATTGTTAGAAAGAGTCAAAGCCTTGGATGATCAGCAAACATGTAACGTTTTTTCGGGAAATAGATCACGAGCACTTCCTTTGCCAGATCATCGGAAAGTTAACAGAGAAAAGAAGCGTCTTGAGGAAAAGGCAAAACTAAAGGAGGAAAAGAGAACTGAGGCAATGGCTGCTGGACATGACGGACAAAGTGATGATTATTCAGATTCAGATGATGATGCTGAAATTGATCCACAAGAAATACAGAAAGAGCCTCCCCTGCCGGATCTAGTCAAGGAAAAAGAGAATCATGACCTCATATTAGATTTGTGCAAGTCACTCGCTTCCTTGAATAGACATTCTGAAGCGTTGAAGATTCTTAAGCTTGCTTTGAAATCAAGTAAAGGCATGGCAGCTTTCCGTGGGAAACTTCGGACTCTTGGAGCTCAAATAGCATACACTGATCCGGATCCTGAGCAGGGGTTGAACTATGTAAAATACATTGCAGACCAGCATCCATACAGCAATGCTGTCTGGAATTGCTATTACAAAGTAATCTCCAGATTTAAGGAGGATTGGTATCGTGACAAGCATTATAAATTTGTGCGCCACAGGCGCCATAGGCGCAACAAATTAAAAGACTGCGCACCACCCAGTATCATAAGTGGCCATCATTATACAAGAAAAAGTCGCCATCAGGATGCCGCAAGAGAATACCTTGAAGCTTATAAGTTATTGCCAGAGAATCCCCTGGTTAATCTGTGTGCTGGTACTGCCTTAATCAACTTGGCCCATGGACATAGACTTCAGAATAAGCACCACTGTATTGCTCAGGGCTTTGCATTCCTCTACAACAATTTGCGGGTTTGCAAAAGCAGCCAGGAGGCTTTGTACAACATAGCCAGGGCATTCCATCAAGTTGGCCTTGTGACTCTGGCAGCTTCCTACTACGAAAAAGTTCTTGACATTCATGTGAAGGACTACCCCATACCAAAACTTCCCCATGAAAATCCAGACTACAATCAAAATCGATTACCAGGTTACTGTGATCTTCGCAGAGAAGCAGCTTTTAATCTACATCTTATCTACAAACAGTGTGGATCATTTGATCTTGCTCGACAGGTCTTGAGAGATCACTGCACCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_19 TPR_6 TPR_7 TPR_8

Protein Analysis

904

Amino Acids

103.36

Weight (kDa)

6.44

Isoelectric Point (pI)

47.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_19 PF14559 165 - 226 2.7e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2163, 2295
Acc16I TGCGCA 2 cut(s) 1148, 2212
AccB1I GGYRCC 1 cut(s) 2181
AccB7I CCANNNNNTGG 1 cut(s) 943
AccI GTMKAC 1 cut(s) 198
AccII CGCG 1 cut(s) 388
AccIII TCCGGA 1 cut(s) 2032
AciI CCGC 5 cut(s) 386, 551, 915, 2271, 2428
AclI AACGTT 1 cut(s) 1635
AclWI GGATC 9 cut(s) 439, 746, 795, 1811, 1860, 2024, 2030, 2043, 2674
AcoI YGGCCR 1 cut(s) 2233
AcsI RAATTY 5 cut(s) 222, 1119, 1172, 1193, 2165
AcuI CTGAAG 8 cut(s) 735, 777, 800, 993, 1028, 1478, 1950, 2357
AcyI GRCGYC 1 cut(s) 2182
AfaI GTAC 5 cut(s) 519, 1257, 1527, 2338, 2459
AfeI AGCGCT 1 cut(s) 929
AfiI CCNNNNNNNGG 2 cut(s) 943, 2045
AflII CTTAAG 2 cut(s) 407, 1946
AflIII ACRYGT 1 cut(s) 1628
AjnI CCWGG 5 cut(s) 865, 2316, 2445, 2468, 2602
AleI CACNNNNGTG 1 cut(s) 1432
Alw21I GWGCWC 4 cut(s) 598, 964, 1663, 2014
Alw26I GTCTC 3 cut(s) 248, 1374, 1383
AlwI GGATC 9 cut(s) 439, 746, 795, 1811, 1860, 2024, 2030, 2043, 2674
Aor13HI TCCGGA 1 cut(s) 2032
Aor51HI AGCGCT 1 cut(s) 929
AoxI GGCC 6 cut(s) 318, 383, 513, 2233, 2355, 2488
ApoI RAATTY 5 cut(s) 222, 1119, 1172, 1193, 2165
ArsI GACNNNNNNTTYG 4 cut(s) 715, 747, 1060, 1092
AseI ATTAAT 1 cut(s) 362
Asp700I GAANNNNTTC 2 cut(s) 1041, 2523
AspLEI GCGC 6 cut(s) 930, 1149, 2175, 2184, 2193, 2213
AspS9I GGNCC 1 cut(s) 2356
AsuHPI GGTGA 1 cut(s) 1397
BalI TGGCCA 1 cut(s) 2235
BamHI GGATCC 1 cut(s) 2035
BanI GGYRCC 1 cut(s) 2181
BanII GRGCYC 1 cut(s) 2014
BauI CACGAG 1 cut(s) 1656
Bbv12I GWGCWC 4 cut(s) 598, 964, 1663, 2014
BbvCI CCTCAGC 1 cut(s) 69
BccI CCATC 6 cut(s) 197, 370, 1436, 2244, 2268, 2487
BceAI ACGGC 2 cut(s) 28, 500
BcgI CGANNNNNNTGC 2 cut(s) 1888, 1922
BciT130I CCWGG 5 cut(s) 867, 2318, 2447, 2470, 2604
BclI TGATCA 1 cut(s) 1618
BcoDI GTCTC 3 cut(s) 248, 1374, 1383
BfaI CTAG 5 cut(s) 21, 726, 1227, 1350, 1856
BfmI CTRYAG 1 cut(s) 195
BfoI RGCGCY 2 cut(s) 931, 2185
BfrI CTTAAG 2 cut(s) 407, 1946
Bme1390I CCNGG 5 cut(s) 867, 2318, 2447, 2470, 2604
BmgT120I GGNCC 1 cut(s) 2356
BmiI GGNNCC 2 cut(s) 2037, 2183
BmrFI CCNGG 5 cut(s) 867, 2318, 2447, 2470, 2604
BmrI ACTGGG 1 cut(s) 2214
BmsI GCATC 5 cut(s) 1479, 1498, 1795, 2089, 2257
BmuI ACTGGG 1 cut(s) 2214
BpmI CTGGAG 2 cut(s) 965, 2110
Bpu10I CCTNAGC 3 cut(s) 69, 2040, 2397
BpuEI CTTGAG 3 cut(s) 1118, 1730, 2713
Bsa29I ATCGAT 1 cut(s) 2596
BsaBI GATNNNNATC 3 cut(s) 567, 2034, 2145
BsaHI GRCGYC 1 cut(s) 2182
BsaJI CCNNGG 6 cut(s) 1430, 1611, 1987, 2316, 2359, 2469
BsaWI WCCGGW 1 cut(s) 2032
BsaXI ACNNNNNCTCC 8 cut(s) 166, 196, 1056, 1086, 2129, 2159, 2441, 2471
Bsc4I CCNNNNNNNGG 2 cut(s) 943, 2045
Bse1I ACTGG 1 cut(s) 2220
Bse3DI GCAATG 4 cut(s) 22, 1758, 2067, 2098
Bse8I GATNNNNATC 3 cut(s) 567, 2034, 2145
BseAI TCCGGA 1 cut(s) 2032
BseBI CCWGG 5 cut(s) 867, 2318, 2447, 2470, 2604
BseCI ATCGAT 1 cut(s) 2596
BseDI CCNNGG 6 cut(s) 1430, 1611, 1987, 2316, 2359, 2469
BseGI GGATG 8 cut(s) 79, 151, 964, 1494, 1513, 1621, 2080, 2272
BseJI GATNNNNATC 3 cut(s) 567, 2034, 2145
BseLI CCNNNNNNNGG 2 cut(s) 943, 2045
BseMI GCAATG 4 cut(s) 22, 1758, 2067, 2098
BseMII CTCAG 5 cut(s) 60, 970, 1737, 2031, 2411
BseNI ACTGG 1 cut(s) 2220
BseRI GAGGAG 3 cut(s) 368, 962, 1371
BsgI GTGCAG 1 cut(s) 2689
Bsh1236I CGCG 1 cut(s) 388
BshFI GGCC 6 cut(s) 320, 385, 515, 2235, 2357, 2490
BshNI GGYRCC 1 cut(s) 2181
BshVI ATCGAT 1 cut(s) 2596
BsiHKAI GWGCWC 4 cut(s) 598, 964, 1663, 2014
BsiSI CCGG 2 cut(s) 1850, 2033
BslI CCNNNNNNNGG 2 cut(s) 943, 2045
BsmAI GTCTC 3 cut(s) 248, 1374, 1383
BsmI GAATGC 2 cut(s) 2408, 2474
BsnI GGCC 6 cut(s) 320, 385, 515, 2235, 2357, 2490
Bsp1286I GDGCHC 4 cut(s) 598, 964, 1663, 2014
Bsp13I TCCGGA 1 cut(s) 2032
Bsp1407I TGTACA 1 cut(s) 2457
Bsp19I CCATGG 2 cut(s) 1430, 2359
BspACI CCGC 5 cut(s) 386, 551, 915, 2271, 2428
BspANI GGCC 6 cut(s) 320, 385, 515, 2235, 2357, 2490
BspCNI CTCAG 5 cut(s) 61, 969, 1738, 2032, 2410
BspDI ATCGAT 1 cut(s) 2596
BspEI TCCGGA 1 cut(s) 2032
BspFNI CGCG 1 cut(s) 388
BspHI TCATGA 2 cut(s) 372, 1876
BspLI GGNNCC 2 cut(s) 2037, 2183
BspPI GGATC 9 cut(s) 439, 746, 795, 1811, 1860, 2024, 2030, 2043, 2674
BspQI GCTCTTC 2 cut(s) 1047, 1293
BspT107I GGYRCC 1 cut(s) 2181
BspTI CTTAAG 2 cut(s) 407, 1946
BsrDI GCAATG 4 cut(s) 22, 1758, 2067, 2098
BsrGI TGTACA 1 cut(s) 2457
BsrI ACTGG 1 cut(s) 2220
BssECI CCNNGG 6 cut(s) 1430, 1611, 1987, 2316, 2359, 2469
BssNI GRCGYC 1 cut(s) 2182
BssSI CACGAG 1 cut(s) 1656
BssT1I CCWWGG 3 cut(s) 1430, 1611, 2359
Bst2BI CACGAG 1 cut(s) 1656
Bst2UI CCWGG 5 cut(s) 867, 2318, 2447, 2470, 2604
Bst4CI ACNGT 5 cut(s) 1400, 1564, 2390, 2612, 2661
Bst6I CTCTTC 3 cut(s) 135, 1047, 1293
BstACI GRCGYC 1 cut(s) 2182
BstAFI CTTAAG 2 cut(s) 407, 1946
BstAPI GCANNNNNTGC 1 cut(s) 1757
BstAUI TGTACA 1 cut(s) 2457
BstC8I GCNNGC 5 cut(s) 383, 464, 546, 1059, 1953
BstDEI CTNAG 8 cut(s) 69, 264, 349, 470, 956, 1746, 2040, 2397
BstDSI CCRYGG 3 cut(s) 1430, 1987, 2359
BstF5I GGATG 8 cut(s) 79, 151, 964, 1494, 1513, 1621, 2080, 2272
BstFNI CGCG 1 cut(s) 388
BstH2I RGCGCY 2 cut(s) 931, 2185
BstHHI GCGC 6 cut(s) 930, 1149, 2175, 2184, 2193, 2213
BstMAI GTCTC 3 cut(s) 248, 1374, 1383
BstNI CCWGG 5 cut(s) 867, 2318, 2447, 2470, 2604
BstNSI RCATGY 3 cut(s) 1061, 1147, 1632
BstSCI CCNGG 5 cut(s) 865, 2316, 2445, 2468, 2602
BstSFI CTRYAG 1 cut(s) 195
BstUI CGCG 1 cut(s) 388
BstX2I RGATCY 2 cut(s) 1852, 2035
BstXI CCANNNNNNTGG 2 cut(s) 638, 2486
BstYI RGATCY 2 cut(s) 1852, 2035
Bsu15I ATCGAT 1 cut(s) 2596
BsuRI GGCC 6 cut(s) 320, 385, 515, 2235, 2357, 2490
BsuTUI ATCGAT 1 cut(s) 2596
BtgI CCRYGG 3 cut(s) 1430, 1987, 2359
BtsCI GGATG 8 cut(s) 79, 151, 964, 1494, 1513, 1621, 2080, 2272
BtsI GCAGTG 1 cut(s) 2701
BtsIMutI CAGTG 7 cut(s) 881, 1188, 1569, 2025, 2386, 2666, 2701
Cac8I GCNNGC 5 cut(s) 383, 464, 546, 1059, 1953
CciI TCATGA 2 cut(s) 372, 1876
CfoI GCGC 6 cut(s) 930, 1149, 2175, 2184, 2193, 2213
Cfr13I GGNCC 1 cut(s) 2356
ClaI ATCGAT 1 cut(s) 2596
CseI GACGC 1 cut(s) 1694
CsiI ACCWGGT 1 cut(s) 2602
Csp6I GTAC 5 cut(s) 518, 1256, 1526, 2337, 2458
CspCI CAANNNNNGTGG 2 cut(s) 2644, 2679
CviQI GTAC 5 cut(s) 518, 1256, 1526, 2337, 2458
DdeI CTNAG 8 cut(s) 69, 264, 349, 470, 956, 1746, 2040, 2397
DinI GGCGCC 1 cut(s) 2183
DraI TTTAAA 2 cut(s) 45, 1287
EaeI YGGCCR 1 cut(s) 2233
Eam1104I CTCTTC 3 cut(s) 135, 1047, 1293
EarI CTCTTC 3 cut(s) 135, 1047, 1293
Ecl136II GAGCTC 1 cut(s) 2012
Eco130I CCWWGG 3 cut(s) 1430, 1611, 2359
Eco24I GRGCYC 1 cut(s) 2014
Eco47III AGCGCT 1 cut(s) 929
Eco53kI GAGCTC 1 cut(s) 2012
Eco57I CTGAAG 8 cut(s) 735, 777, 800, 993, 1028, 1478, 1950, 2357
EcoICRI GAGCTC 1 cut(s) 2012
EcoRII CCWGG 5 cut(s) 865, 2316, 2445, 2468, 2602
EcoT14I CCWWGG 3 cut(s) 1430, 1611, 2359
EcoT38I GRGCYC 1 cut(s) 2014
EgeI GGCGCC 1 cut(s) 2183
EheI GGCGCC 1 cut(s) 2183
ErhI CCWWGG 3 cut(s) 1430, 1611, 2359
FalI AAGNNNNNCTT 2 cut(s) 2475, 2507
FauI CCCGC 1 cut(s) 2421
FbaI TGATCA 1 cut(s) 1618
FblI GTMKAC 1 cut(s) 198
FokI GGATG 8 cut(s) 86, 158, 951, 1501, 1520, 1628, 2067, 2279
FriOI GRGCYC 1 cut(s) 2014
FspBI CTAG 5 cut(s) 21, 726, 1227, 1350, 1856
FspI TGCGCA 2 cut(s) 1148, 2212
GlaI GCGC 6 cut(s) 929, 1148, 2174, 2183, 2192, 2212
GsuI CTGGAG 2 cut(s) 965, 2110
HaeII RGCGCY 2 cut(s) 931, 2185
HaeIII GGCC 6 cut(s) 320, 385, 515, 2235, 2357, 2490
HapII CCGG 2 cut(s) 1850, 2033
HgaI GACGC 1 cut(s) 1694
HhaI GCGC 6 cut(s) 930, 1149, 2175, 2184, 2193, 2213
Hin1I GRCGYC 1 cut(s) 2182
Hin6I GCGC 6 cut(s) 928, 1147, 2173, 2182, 2191, 2211
HinP1I GCGC 6 cut(s) 928, 1147, 2173, 2182, 2191, 2211
HincII GTYRAC 1 cut(s) 1690
HindII GTYRAC 1 cut(s) 1690
HindIII AAGCTT 7 cut(s) 346, 404, 717, 1281, 1460, 1949, 2289
HpaI GTTAAC 1 cut(s) 1690
HpaII CCGG 2 cut(s) 1850, 2033
HphI GGTGA 1 cut(s) 1397
Hpy166II GTNNAC 6 cut(s) 199, 672, 1167, 1405, 1528, 1690
Hpy8I GTNNAC 6 cut(s) 199, 672, 1167, 1405, 1528, 1690
Hpy99I CGWCG 1 cut(s) 1139
HpyAV CCTTC 5 cut(s) 310, 384, 532, 672, 2536
HpyCH4III ACNGT 5 cut(s) 1400, 1564, 2390, 2612, 2661
HpyCH4IV ACGT 3 cut(s) 674, 1134, 1635
HpyF3I CTNAG 8 cut(s) 69, 264, 349, 470, 956, 1746, 2040, 2397
HpySE526I ACGT 3 cut(s) 674, 1134, 1635
Hsp92I GRCGYC 1 cut(s) 2182
HspAI GCGC 6 cut(s) 928, 1147, 2173, 2182, 2191, 2211
KasI GGCGCC 1 cut(s) 2181
Kpn2I TCCGGA 1 cut(s) 2032
Ksp22I TGATCA 1 cut(s) 1618
KspAI GTTAAC 1 cut(s) 1690
LguI GCTCTTC 2 cut(s) 1047, 1293
LmnI GCTCC 3 cut(s) 187, 893, 2009
LweI GCATC 5 cut(s) 1479, 1498, 1795, 2089, 2257
MabI ACCWGGT 1 cut(s) 2602
MaeI CTAG 5 cut(s) 21, 726, 1227, 1350, 1856
MaeII ACGT 3 cut(s) 674, 1134, 1635
MaeIII GTNAC 6 cut(s) 1184, 1631, 1902, 2150, 2494, 2606
MflI RGATCY 2 cut(s) 1852, 2035
MhlI GDGCHC 4 cut(s) 598, 964, 1663, 2014
MlsI TGGCCA 1 cut(s) 2235
MluNI TGGCCA 1 cut(s) 2235
Mly113I GGCGCC 1 cut(s) 2182
MlyI GAGTC 3 cut(s) 1611, 1996, 2491
MmeI TCCRAC 3 cut(s) 765, 992, 1117
Mox20I TGGCCA 1 cut(s) 2235
MroI TCCGGA 1 cut(s) 2032
MroXI GAANNNNTTC 2 cut(s) 1041, 2523
MscI TGGCCA 1 cut(s) 2235
MslI CAYNNNNRTG 4 cut(s) 1432, 1435, 2265, 2537
Msp20I TGGCCA 1 cut(s) 2235
MspA1I CMGCKG 1 cut(s) 749
MspCI CTTAAG 2 cut(s) 407, 1946
MspI CCGG 2 cut(s) 1850, 2033
MspR9I CCNGG 5 cut(s) 867, 2318, 2447, 2470, 2604
Mva1269I GAATGC 2 cut(s) 2408, 2474
MvaI CCWGG 5 cut(s) 867, 2318, 2447, 2470, 2604
MvnI CGCG 1 cut(s) 388
NarI GGCGCC 1 cut(s) 2182
NcoI CCATGG 2 cut(s) 1430, 2359
NlaIV GGNNCC 2 cut(s) 2037, 2183
NmuCI GTSAC 3 cut(s) 1902, 2150, 2494
NsbI TGCGCA 2 cut(s) 1148, 2212
NspI RCATGY 3 cut(s) 1061, 1147, 1632
OliI CACNNNNGTG 1 cut(s) 1432
PaeI GCATGC 1 cut(s) 1061
PagI TCATGA 2 cut(s) 372, 1876
PciI ACATGT 1 cut(s) 1628
PciSI GCTCTTC 2 cut(s) 1047, 1293
PctI GAATGC 2 cut(s) 2408, 2474
PdmI GAANNNNTTC 2 cut(s) 1041, 2523
PfeI GAWTC 9 cut(s) 131, 191, 563, 1346, 1532, 1793, 1873, 1942, 2311
PflMI CCANNNNNTGG 1 cut(s) 943
PleI GAGTC 3 cut(s) 1610, 1996, 2491
PluTI GGCGCC 1 cut(s) 2185
PpsI GAGTC 3 cut(s) 1610, 1996, 2491
PscI ACATGT 1 cut(s) 1628
PshBI ATTAAT 1 cut(s) 362
PsiI TTATAA 2 cut(s) 2163, 2295
Psp124BI GAGCTC 1 cut(s) 2014
Psp1406I AACGTT 1 cut(s) 1635
Psp6I CCWGG 5 cut(s) 865, 2316, 2445, 2468, 2602
PspGI CCWGG 5 cut(s) 865, 2316, 2445, 2468, 2602
PspN4I GGNNCC 2 cut(s) 2037, 2183
PspPI GGNCC 1 cut(s) 2356
PsuI RGATCY 2 cut(s) 1852, 2035
PvuII CAGCTG 1 cut(s) 749
RsaI GTAC 5 cut(s) 519, 1257, 1527, 2338, 2459
RsaNI GTAC 5 cut(s) 518, 1256, 1526, 2337, 2458
RseI CAYNNNNRTG 4 cut(s) 1432, 1435, 2265, 2537
SacI GAGCTC 1 cut(s) 2014
SapI GCTCTTC 2 cut(s) 1047, 1293
Sau96I GGNCC 1 cut(s) 2356
SchI GAGTC 3 cut(s) 1611, 1996, 2491
ScrFI CCNGG 5 cut(s) 867, 2318, 2447, 2470, 2604
SduI GDGCHC 4 cut(s) 598, 964, 1663, 2014
SexAI ACCWGGT 1 cut(s) 2602
SfaNI GCATC 5 cut(s) 1479, 1498, 1795, 2089, 2257
SfcI CTRYAG 1 cut(s) 195
SfoI GGCGCC 1 cut(s) 2183
SmiMI CAYNNNNRTG 4 cut(s) 1432, 1435, 2265, 2537
SmlI CTYRAG 5 cut(s) 407, 1097, 1709, 1946, 2692
SmoI CTYRAG 5 cut(s) 407, 1097, 1709, 1946, 2692
SphI GCATGC 1 cut(s) 1061
SsiI CCGC 5 cut(s) 386, 551, 915, 2271, 2428
SspDI GGCGCC 1 cut(s) 2181
SspMI CTAG 5 cut(s) 21, 726, 1227, 1350, 1856
SstI GAGCTC 1 cut(s) 2014
StyD4I CCNGG 5 cut(s) 865, 2316, 2445, 2468, 2602
StyI CCWWGG 3 cut(s) 1430, 1611, 2359
TaaI ACNGT 5 cut(s) 1400, 1564, 2390, 2612, 2661
TaiI ACGT 3 cut(s) 677, 1137, 1638
TaqI TCGA 7 cut(s) 481, 722, 734, 1315, 1395, 2596, 2683
TatI WGTACW 2 cut(s) 1255, 2457
TauI GCSGC 2 cut(s) 388, 2273
TfiI GAWTC 9 cut(s) 131, 191, 563, 1346, 1532, 1793, 1873, 1942, 2311
TscAI CASTG 7 cut(s) 888, 1195, 1569, 2032, 2393, 2666, 2708
TseFI GTSAC 3 cut(s) 1902, 2150, 2494
Tsp45I GTSAC 3 cut(s) 1902, 2150, 2494
TspGWI ACGGA 2 cut(s) 1785, 1976
TspRI CASTG 7 cut(s) 888, 1195, 1569, 2032, 2393, 2666, 2708
Van91I CCANNNNNTGG 1 cut(s) 943
Vha464I CTTAAG 2 cut(s) 407, 1946
VspI ATTAAT 1 cut(s) 362
XapI RAATTY 5 cut(s) 222, 1119, 1172, 1193, 2165
XbaI TCTAGA 1 cut(s) 1349
XceI RCATGY 3 cut(s) 1061, 1147, 1632
XcmI CCANNNNNNNNNTGG 2 cut(s) 596, 863
XmiI GTMKAC 1 cut(s) 198
XmnI GAANNNNTTC 2 cut(s) 1041, 2523
XspI CTAG 5 cut(s) 21, 726, 1227, 1350, 1856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.