Rroxscaffold_7G00173850

General transcription factor 3C polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001600
Physical Location & Seq
Forward (+)
13716590 .. 13719295
2706 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00173850.1

Sequence Viewer

Length: 2706 bp
ATGGATAAAAACGGCAATGCTAGTTGTGATCGTGGGGAAGCTTTAAAGTATGTGTTTGATTTGGGTGCTGAGGATGACATTATAGAAGATGAGGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATAGTGATGAAGAATCCGAAGAAGAGGATGAGGAAGAAGAAGATGACACCTTTAATTCTGTAGACGATGGTACTTTTGCTGACCAAATTTACCCAGATTTTGTGGGGAAGGAGTATGAGACTTTAGCTAAGAAAAAACGAAAACCACTTGGGGATAGTCGCCCTAAAGGTTCCGTTAAGAAGGCCAGAAAAGATGAGGGTTCTAAAGAAAGCTTAGAGGAGGAATTAATGGCGTTCATGATGGGCAGGCCGCGAAGGAGATCAAGGAAGCTTAAGAAAAGAGGTAGAAGAAAAGGATCAAAGAACCAATGCAGCCCTGAAATTAGCAGGCTTCTTAGTAAGGCTCGAAATTGCTATGCACTTGGGGATTACAAAGAGGCCATACCCGTCTTGAAAGAAGTGATTAAGCAAGCACCGCATTTCCCCGATTCCTATCAGACACTTGGAGATGTCCATACTGCTCTTGGCGATAAAAATAGAGCCTTAAATTGCTACCATGTTGCTGGACATTTAGCACCGAAAAATCCTTCTTTGTGGACATTAATTTTTACAAAGTTCATGGAAGTAGGGAACATTTCTGAAGCTTCGACTAGCCTTTCGAGAGCAATATCAGCTGATCCTGAAGCCGAAAATGTTGTTGCTCTGAAGTTGGATCGTGCTTCACTCCATGTTCAGCTTAAAGATTATGAAAAAGCTGCTGCATTGTATGAAGAAATAATCCAAGCCTGTCCTGGTAATGTTAAAGCACTGAAGACAGGAGCAGAGATGTATGAAAAATGCGGTCAGCGTGAGCGTTCTATCCATGTGCTGGAGGAGTATCTCAGAGCACATCCAACTGAAGCTGATTTGAGTGTCATTGATTTGTTAGTTTCTCTACTTATGGAAAACAATTTACATAATGAAGCTCTTCAGCATATTGAGCATGCACAACTGACACTCCATTCGGGAAAAGAGCTGCCTCTCGAGATGAAAGTTAAAGCAGGAATTTGCCAAGCTAACCTCGGAAACATGCGCAAGGCAGCAAGTCTGTTCACTGAATTTGCAGAGAGCAACACTGAATTTAATAAAGGCTTTTTACATTTGAAAATTGCTAGATGTTATTTGTCCTTAAAGTATAGAGTACAAGCAATTTTCTACTTCTACCAAGCTTTAAAGACACTTGAAGAGCATATTGAGGCTCGATTGACATTGGCTTCTGTTCTCCTTGAAGAATCTAGAGATGATGAAGCTATATCTCTGCTGTCTCCTCCAAGAAATCGAGACTGTGTTCACCTCCCAACTGATAAAGCAACACCATGGTGGTGTGATGGAAAAGTGAAGCTGAAGCTTTGCAACATATTCAGAGTTAAAGGGATGCACAAGGAACTTGTGGATGCAATCTATGATTTGGTACACGAATCATTACAGATTATATCACTTGGGAGAACAGTGAAAAGGAAGCTCTTGAAAAAGGAATTGTTAGAAAGAGTCAAAGCCTTGGATGATCAGCAAACATGTAACGTTTTTTCGGGAAATAGATCACGAGCACTTCCTTTACCAGATCATCGGAAAGTTAACAGAGAAAAGAAGCGTCTTGAGGAAAAGGCAAAACTAAAGGAGGAAAAGAGAACTGAGGCAATGGCTGCTGGACATGAAGGACAAAGTGATGATTATTCAGATTCAGATGATGATCCTGAAATTGATCCACAAGAAATACAGAAAGAGCCTCCCCTGCCGGATCTAGTCAAGGAAAAAGAGAATCATGACCTCATATTAGATTTGTGTAAGTCACTCGCTTCCTTGAATAGACATTCTGAAGCGTTGAAGATTCTTAAACTTGCTTTGAAATCAAGTAAAGGCATGGGAGCTTTCCGTGGGAAACTTCGGACTCTTGGAGCTCAAATAGCATACACCGATCCGGATCCTGAGCAGGGGTTGAACTATGTAAAATACATTGCAGACCAGCATCCATACAGCAATGCTGTCTGGAATTGCTATTACAAAGTAATCTCCAGATTTAAGGAGGATTGGTATCGTGACAAGCATTATAAATTTGTGCGCCACAGGCGCCATAGGCGCAACAAATTAAAAGACTGCGCACCACCCAGTATCATAAGTGGCCATCATTATACAAGAAAAAGTCGCCATCAGGATGCCGCAAGAGAATACCTTGAAGCTTATAAGTTATTGCCAGAGAATCCCCTGGTTAATCTGTGTGCTGGTACTGCCTTAATCAACTTGGCCCGTGGACAAAGACTTCAGAATAAGCACCACTGTATTGCTCAGGGCTTTGCATTCCTCTACAACAATTTGCGGGTTTGCAAAAGCAGCCAGGAGGCTTTGTACAACATAGCCAGGGCATTCCATCAAGTTGGCCTTGTGACTCTGGCAGCTTCCTACTACGAAAAAGTTCTGGACATTCATGTGAAGGACTACCCCATACCAAAACTTCCCCATGAAAATCCAGAATACAATCAAAATCGATTACCAGGTTACTGTGATCTTCGCAGAGAAGCAGCTTTTAATCTACATCTTATCTACAAACAGTGTGGATCATTTGATCTTGCTCGACAGGTTTTGAGAGATCACTGCACCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_19 TPR_6 TPR_7 TPR_8

Protein Analysis

901

Amino Acids

103.19

Weight (kDa)

6.6

Isoelectric Point (pI)

46.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_19 PF14559 162 - 223 1.4e-07 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2154, 2286
Acc16I TGCGCA 2 cut(s) 1139, 2203
AccB1I GGYRCC 1 cut(s) 2172
AccB7I CCANNNNNTGG 1 cut(s) 934
AccI GTMKAC 1 cut(s) 189
AccII CGCG 1 cut(s) 379
AccIII TCCGGA 1 cut(s) 2023
AciI CCGC 5 cut(s) 377, 542, 906, 2262, 2419
AclI AACGTT 1 cut(s) 1626
AcoI YGGCCR 1 cut(s) 2224
AcsI RAATTY 5 cut(s) 213, 1110, 1163, 1184, 2156
AcuI CTGAAG 9 cut(s) 726, 768, 791, 896, 984, 1019, 1469, 1941, 2348
AcyI GRCGYC 1 cut(s) 2173
AfaI GTAC 5 cut(s) 199, 1248, 1518, 2329, 2450
AfiI CCNNNNNNNGG 2 cut(s) 934, 2036
AflII CTTAAG 1 cut(s) 398
AflIII ACRYGT 1 cut(s) 1619
AjnI CCWGG 5 cut(s) 856, 2307, 2436, 2459, 2593
AleI CACNNNNGTG 1 cut(s) 1423
Alw21I GWGCWC 3 cut(s) 955, 1654, 2005
Alw26I GTCTC 3 cut(s) 239, 1374, 1380
Ama87I CYCGRG 1 cut(s) 1088
Aor13HI TCCGGA 1 cut(s) 2023
AoxI GGCC 6 cut(s) 309, 374, 504, 2224, 2346, 2479
ApeKI GCWGC 9 cut(s) 438, 821, 824, 1081, 1145, 1748, 2433, 2495, 2621
ApoI RAATTY 5 cut(s) 213, 1110, 1163, 1184, 2156
ArsI GACNNNNNNTTYG 4 cut(s) 706, 738, 1051, 1083
AseI ATTAAT 2 cut(s) 353, 668
Asp700I GAANNNNTTC 2 cut(s) 1032, 2514
AspLEI GCGC 5 cut(s) 1140, 2166, 2175, 2184, 2204
AspS9I GGNCC 1 cut(s) 2347
AsuHPI GGTGA 1 cut(s) 1388
AvaI CYCGRG 1 cut(s) 1088
BalI TGGCCA 1 cut(s) 2226
BamHI GGATCC 1 cut(s) 2026
BanI GGYRCC 1 cut(s) 2172
BanII GRGCYC 1 cut(s) 2005
BauI CACGAG 1 cut(s) 1647
BbsI GAAGAC 1 cut(s) 884
Bbv12I GWGCWC 3 cut(s) 955, 1654, 2005
BbvCI CCTCAGC 1 cut(s) 69
BbvI GCAGC 9 cut(s) 450, 808, 811, 1068, 1157, 1735, 2445, 2507, 2633
BccI CCATC 6 cut(s) 188, 361, 1427, 2235, 2259, 2478
BceAI ACGGC 1 cut(s) 28
BciT130I CCWGG 5 cut(s) 858, 2309, 2438, 2461, 2595
BclI TGATCA 1 cut(s) 1609
BcoDI GTCTC 3 cut(s) 239, 1374, 1380
BfaI CTAG 5 cut(s) 21, 717, 1218, 1341, 1847
BfmI CTRYAG 1 cut(s) 186
BfoI RGCGCY 1 cut(s) 2176
BfrI CTTAAG 1 cut(s) 398
Bme1390I CCNGG 5 cut(s) 858, 2309, 2438, 2461, 2595
BmeT110I CYCGRG 1 cut(s) 1088
BmgT120I GGNCC 1 cut(s) 2347
BmiI GGNNCC 3 cut(s) 298, 2028, 2174
BmrFI CCNGG 5 cut(s) 858, 2309, 2438, 2461, 2595
BmrI ACTGGG 1 cut(s) 2205
BmsI GCATC 4 cut(s) 1470, 1489, 2080, 2248
BmuI ACTGGG 1 cut(s) 2205
BpiI GAAGAC 1 cut(s) 884
BpmI CTGGAG 2 cut(s) 956, 2101
Bpu10I CCTNAGC 3 cut(s) 69, 2031, 2388
BpuEI CTTGAG 1 cut(s) 1721
Bsa29I ATCGAT 1 cut(s) 2587
BsaBI GATNNNNATC 4 cut(s) 558, 1794, 2025, 2136
BsaHI GRCGYC 1 cut(s) 2173
BsaJI CCNNGG 7 cut(s) 1126, 1421, 1602, 1978, 2307, 2350, 2460
BsaWI WCCGGW 1 cut(s) 2023
BsaXI ACNNNNNCTCC 6 cut(s) 1047, 1077, 2120, 2150, 2432, 2462
Bsc4I CCNNNNNNNGG 2 cut(s) 934, 2036
Bse1I ACTGG 1 cut(s) 2211
Bse3DI GCAATG 4 cut(s) 22, 1749, 2058, 2089
Bse8I GATNNNNATC 4 cut(s) 558, 1794, 2025, 2136
BseAI TCCGGA 1 cut(s) 2023
BseBI CCWGG 5 cut(s) 858, 2309, 2438, 2461, 2595
BseCI ATCGAT 1 cut(s) 2587
BseDI CCNNGG 7 cut(s) 1126, 1421, 1602, 1978, 2307, 2350, 2460
BseGI GGATG 8 cut(s) 79, 160, 955, 1485, 1504, 1612, 2071, 2263
BseJI GATNNNNATC 4 cut(s) 558, 1794, 2025, 2136
BseLI CCNNNNNNNGG 2 cut(s) 934, 2036
BseMI GCAATG 4 cut(s) 22, 1749, 2058, 2089
BseMII CTCAG 5 cut(s) 60, 961, 1728, 2022, 2402
BseNI ACTGG 1 cut(s) 2211
BseRI GAGGAG 3 cut(s) 359, 953, 1362
BseXI GCAGC 9 cut(s) 450, 808, 811, 1068, 1157, 1735, 2445, 2507, 2633
BsgI GTGCAG 1 cut(s) 2680
Bsh1236I CGCG 1 cut(s) 379
BshFI GGCC 6 cut(s) 311, 376, 506, 2226, 2348, 2481
BshNI GGYRCC 1 cut(s) 2172
BshVI ATCGAT 1 cut(s) 2587
BsiHKAI GWGCWC 3 cut(s) 955, 1654, 2005
BsiHKCI CYCGRG 1 cut(s) 1088
BsiSI CCGG 2 cut(s) 1841, 2024
BslI CCNNNNNNNGG 2 cut(s) 934, 2036
BsmAI GTCTC 3 cut(s) 239, 1374, 1380
BsmI GAATGC 2 cut(s) 2399, 2465
BsnI GGCC 6 cut(s) 311, 376, 506, 2226, 2348, 2481
BsoBI CYCGRG 1 cut(s) 1088
Bsp1286I GDGCHC 3 cut(s) 955, 1654, 2005
Bsp13I TCCGGA 1 cut(s) 2023
Bsp1407I TGTACA 1 cut(s) 2448
Bsp19I CCATGG 1 cut(s) 1421
BspACI CCGC 5 cut(s) 377, 542, 906, 2262, 2419
BspANI GGCC 6 cut(s) 311, 376, 506, 2226, 2348, 2481
BspCNI CTCAG 5 cut(s) 61, 960, 1729, 2023, 2401
BspDI ATCGAT 1 cut(s) 2587
BspEI TCCGGA 1 cut(s) 2023
BspFNI CGCG 1 cut(s) 379
BspHI TCATGA 2 cut(s) 363, 1867
BspLI GGNNCC 3 cut(s) 298, 2028, 2174
BspQI GCTCTTC 2 cut(s) 1038, 1284
BspT107I GGYRCC 1 cut(s) 2172
BspTI CTTAAG 1 cut(s) 398
BsrDI GCAATG 4 cut(s) 22, 1749, 2058, 2089
BsrGI TGTACA 1 cut(s) 2448
BsrI ACTGG 1 cut(s) 2211
BssECI CCNNGG 7 cut(s) 1126, 1421, 1602, 1978, 2307, 2350, 2460
BssNI GRCGYC 1 cut(s) 2173
BssSI CACGAG 1 cut(s) 1647
BssT1I CCWWGG 2 cut(s) 1421, 1602
Bst2BI CACGAG 1 cut(s) 1647
Bst2UI CCWGG 5 cut(s) 858, 2309, 2438, 2461, 2595
Bst4CI ACNGT 5 cut(s) 1391, 1555, 2381, 2603, 2652
Bst6I CTCTTC 3 cut(s) 144, 1038, 1284
BstACI GRCGYC 1 cut(s) 2173
BstAFI CTTAAG 1 cut(s) 398
BstAPI GCANNNNNTGC 1 cut(s) 1748
BstAUI TGTACA 1 cut(s) 2448
BstC8I GCNNGC 4 cut(s) 374, 455, 537, 1050
BstDEI CTNAG 8 cut(s) 69, 255, 340, 461, 947, 1737, 2031, 2388
BstDSI CCRYGG 3 cut(s) 1421, 1978, 2350
BstF5I GGATG 8 cut(s) 79, 160, 955, 1485, 1504, 1612, 2071, 2263
BstFNI CGCG 1 cut(s) 379
BstH2I RGCGCY 1 cut(s) 2176
BstHHI GCGC 5 cut(s) 1140, 2166, 2175, 2184, 2204
BstMAI GTCTC 3 cut(s) 239, 1374, 1380
BstNI CCWGG 5 cut(s) 858, 2309, 2438, 2461, 2595
BstNSI RCATGY 3 cut(s) 1052, 1138, 1623
BstSCI CCNGG 5 cut(s) 856, 2307, 2436, 2459, 2593
BstSFI CTRYAG 1 cut(s) 186
BstUI CGCG 1 cut(s) 379
BstV1I GCAGC 9 cut(s) 450, 808, 811, 1068, 1157, 1735, 2445, 2507, 2633
BstV2I GAAGAC 1 cut(s) 884
BstX2I RGATCY 2 cut(s) 1843, 2026
BstXI CCANNNNNNTGG 2 cut(s) 629, 2477
BstYI RGATCY 2 cut(s) 1843, 2026
Bsu15I ATCGAT 1 cut(s) 2587
BsuRI GGCC 6 cut(s) 311, 376, 506, 2226, 2348, 2481
BsuTUI ATCGAT 1 cut(s) 2587
BtgI CCRYGG 3 cut(s) 1421, 1978, 2350
BtsCI GGATG 8 cut(s) 79, 160, 955, 1485, 1504, 1612, 2071, 2263
BtsI GCAGTG 1 cut(s) 2692
BtsIMutI CAGTG 7 cut(s) 872, 1158, 1179, 1560, 2377, 2657, 2692
Cac8I GCNNGC 4 cut(s) 374, 455, 537, 1050
CciI TCATGA 2 cut(s) 363, 1867
CfoI GCGC 5 cut(s) 1140, 2166, 2175, 2184, 2204
Cfr13I GGNCC 1 cut(s) 2347
ClaI ATCGAT 1 cut(s) 2587
CseI GACGC 1 cut(s) 1685
CsiI ACCWGGT 1 cut(s) 2593
Csp6I GTAC 5 cut(s) 198, 1247, 1517, 2328, 2449
CspCI CAANNNNNGTGG 2 cut(s) 2635, 2670
CviQI GTAC 5 cut(s) 198, 1247, 1517, 2328, 2449
DdeI CTNAG 8 cut(s) 69, 255, 340, 461, 947, 1737, 2031, 2388
DinI GGCGCC 1 cut(s) 2174
DraI TTTAAA 2 cut(s) 45, 1278
EaeI YGGCCR 1 cut(s) 2224
Eam1104I CTCTTC 3 cut(s) 144, 1038, 1284
EarI CTCTTC 3 cut(s) 144, 1038, 1284
Ecl136II GAGCTC 1 cut(s) 2003
Eco130I CCWWGG 2 cut(s) 1421, 1602
Eco24I GRGCYC 1 cut(s) 2005
Eco53kI GAGCTC 1 cut(s) 2003
Eco57I CTGAAG 9 cut(s) 726, 768, 791, 896, 984, 1019, 1469, 1941, 2348
Eco88I CYCGRG 1 cut(s) 1088
EcoICRI GAGCTC 1 cut(s) 2003
EcoRII CCWGG 5 cut(s) 856, 2307, 2436, 2459, 2593
EcoT14I CCWWGG 2 cut(s) 1421, 1602
EcoT38I GRGCYC 1 cut(s) 2005
EgeI GGCGCC 1 cut(s) 2174
EheI GGCGCC 1 cut(s) 2174
ErhI CCWWGG 2 cut(s) 1421, 1602
FalI AAGNNNNNCTT 2 cut(s) 2466, 2498
FauI CCCGC 1 cut(s) 2412
FbaI TGATCA 1 cut(s) 1609
FblI GTMKAC 1 cut(s) 189
FokI GGATG 8 cut(s) 86, 167, 942, 1492, 1511, 1619, 2058, 2270
FriOI GRGCYC 1 cut(s) 2005
FspBI CTAG 5 cut(s) 21, 717, 1218, 1341, 1847
FspI TGCGCA 2 cut(s) 1139, 2203
GlaI GCGC 5 cut(s) 1139, 2165, 2174, 2183, 2203
GsuI CTGGAG 2 cut(s) 956, 2101
HaeII RGCGCY 1 cut(s) 2176
HaeIII GGCC 6 cut(s) 311, 376, 506, 2226, 2348, 2481
HapII CCGG 2 cut(s) 1841, 2024
HgaI GACGC 1 cut(s) 1685
HhaI GCGC 5 cut(s) 1140, 2166, 2175, 2184, 2204
Hin1I GRCGYC 1 cut(s) 2173
Hin6I GCGC 5 cut(s) 1138, 2164, 2173, 2182, 2202
HinP1I GCGC 5 cut(s) 1138, 2164, 2173, 2182, 2202
HincII GTYRAC 1 cut(s) 1681
HindII GTYRAC 1 cut(s) 1681
HindIII AAGCTT 7 cut(s) 39, 337, 395, 708, 1272, 1451, 2280
HpaI GTTAAC 1 cut(s) 1681
HpaII CCGG 2 cut(s) 1841, 2024
HphI GGTGA 1 cut(s) 1388
Hpy166II GTNNAC 7 cut(s) 190, 663, 1158, 1396, 1519, 1681, 2354
Hpy8I GTNNAC 7 cut(s) 190, 663, 1158, 1396, 1519, 1681, 2354
HpyAV CCTTC 6 cut(s) 229, 301, 375, 663, 1754, 2527
HpyCH4III ACNGT 5 cut(s) 1391, 1555, 2381, 2603, 2652
HpyCH4IV ACGT 1 cut(s) 1626
HpyF3I CTNAG 8 cut(s) 69, 255, 340, 461, 947, 1737, 2031, 2388
HpySE526I ACGT 1 cut(s) 1626
Hsp92I GRCGYC 1 cut(s) 2173
HspAI GCGC 5 cut(s) 1138, 2164, 2173, 2182, 2202
KasI GGCGCC 1 cut(s) 2172
Kpn2I TCCGGA 1 cut(s) 2023
Ksp22I TGATCA 1 cut(s) 1609
KspAI GTTAAC 1 cut(s) 1681
LguI GCTCTTC 2 cut(s) 1038, 1284
LmnI GCTCC 3 cut(s) 884, 1970, 2000
Lsp1109I GCAGC 9 cut(s) 450, 808, 811, 1068, 1157, 1735, 2445, 2507, 2633
LweI GCATC 4 cut(s) 1470, 1489, 2080, 2248
MabI ACCWGGT 1 cut(s) 2593
MaeI CTAG 5 cut(s) 21, 717, 1218, 1341, 1847
MaeII ACGT 1 cut(s) 1626
MaeIII GTNAC 5 cut(s) 1622, 1893, 2141, 2485, 2597
MflI RGATCY 2 cut(s) 1843, 2026
MhlI GDGCHC 3 cut(s) 955, 1654, 2005
MlsI TGGCCA 1 cut(s) 2226
MluNI TGGCCA 1 cut(s) 2226
Mly113I GGCGCC 1 cut(s) 2173
MlyI GAGTC 3 cut(s) 1602, 1987, 2482
MmeI TCCRAC 2 cut(s) 756, 983
Mox20I TGGCCA 1 cut(s) 2226
MroI TCCGGA 1 cut(s) 2023
MroXI GAANNNNTTC 2 cut(s) 1032, 2514
MscI TGGCCA 1 cut(s) 2226
MslI CAYNNNNRTG 4 cut(s) 1423, 1426, 2256, 2528
Msp20I TGGCCA 1 cut(s) 2226
MspA1I CMGCKG 1 cut(s) 740
MspCI CTTAAG 1 cut(s) 398
MspI CCGG 2 cut(s) 1841, 2024
MspR9I CCNGG 5 cut(s) 858, 2309, 2438, 2461, 2595
Mva1269I GAATGC 2 cut(s) 2399, 2465
MvaI CCWGG 5 cut(s) 858, 2309, 2438, 2461, 2595
MvnI CGCG 1 cut(s) 379
NarI GGCGCC 1 cut(s) 2173
NcoI CCATGG 1 cut(s) 1421
NlaIV GGNNCC 3 cut(s) 298, 2028, 2174
NmuCI GTSAC 3 cut(s) 1893, 2141, 2485
NsbI TGCGCA 2 cut(s) 1139, 2203
NspI RCATGY 3 cut(s) 1052, 1138, 1623
OliI CACNNNNGTG 1 cut(s) 1423
PaeI GCATGC 1 cut(s) 1052
PaeR7I CTCGAG 1 cut(s) 1088
PagI TCATGA 2 cut(s) 363, 1867
PciI ACATGT 1 cut(s) 1619
PciSI GCTCTTC 2 cut(s) 1038, 1284
PctI GAATGC 2 cut(s) 2399, 2465
PdmI GAANNNNTTC 2 cut(s) 1032, 2514
PfeI GAWTC 8 cut(s) 140, 554, 1337, 1523, 1784, 1864, 1933, 2302
PflMI CCANNNNNTGG 1 cut(s) 934
PleI GAGTC 3 cut(s) 1601, 1987, 2482
PluTI GGCGCC 1 cut(s) 2176
PpsI GAGTC 3 cut(s) 1601, 1987, 2482
PscI ACATGT 1 cut(s) 1619
PshBI ATTAAT 2 cut(s) 353, 668
PsiI TTATAA 2 cut(s) 2154, 2286
Psp124BI GAGCTC 1 cut(s) 2005
Psp1406I AACGTT 1 cut(s) 1626
Psp6I CCWGG 5 cut(s) 856, 2307, 2436, 2459, 2593
PspGI CCWGG 5 cut(s) 856, 2307, 2436, 2459, 2593
PspN4I GGNNCC 3 cut(s) 298, 2028, 2174
PspPI GGNCC 1 cut(s) 2347
PsuI RGATCY 2 cut(s) 1843, 2026
PvuII CAGCTG 1 cut(s) 740
RsaI GTAC 5 cut(s) 199, 1248, 1518, 2329, 2450
RsaNI GTAC 5 cut(s) 198, 1247, 1517, 2328, 2449
RseI CAYNNNNRTG 4 cut(s) 1423, 1426, 2256, 2528
SacI GAGCTC 1 cut(s) 2005
SapI GCTCTTC 2 cut(s) 1038, 1284
Sau96I GGNCC 1 cut(s) 2347
SchI GAGTC 3 cut(s) 1602, 1987, 2482
ScrFI CCNGG 5 cut(s) 858, 2309, 2438, 2461, 2595
SduI GDGCHC 3 cut(s) 955, 1654, 2005
SexAI ACCWGGT 1 cut(s) 2593
SfaNI GCATC 4 cut(s) 1470, 1489, 2080, 2248
SfcI CTRYAG 1 cut(s) 186
SfoI GGCGCC 1 cut(s) 2174
Sfr274I CTCGAG 1 cut(s) 1088
SlaI CTCGAG 1 cut(s) 1088
SmiMI CAYNNNNRTG 4 cut(s) 1423, 1426, 2256, 2528
SmlI CTYRAG 3 cut(s) 398, 1088, 1700
SmoI CTYRAG 3 cut(s) 398, 1088, 1700
SphI GCATGC 1 cut(s) 1052
SsiI CCGC 5 cut(s) 377, 542, 906, 2262, 2419
SspDI GGCGCC 1 cut(s) 2172
SspMI CTAG 5 cut(s) 21, 717, 1218, 1341, 1847
SstI GAGCTC 1 cut(s) 2005
StyD4I CCNGG 5 cut(s) 856, 2307, 2436, 2459, 2593
StyI CCWWGG 2 cut(s) 1421, 1602
TaaI ACNGT 5 cut(s) 1391, 1555, 2381, 2603, 2652
TaiI ACGT 1 cut(s) 1629
TaqI TCGA 8 cut(s) 472, 713, 725, 1089, 1306, 1384, 2587, 2674
TatI WGTACW 2 cut(s) 1246, 2448
TauI GCSGC 2 cut(s) 379, 2264
TfiI GAWTC 8 cut(s) 140, 554, 1337, 1523, 1784, 1864, 1933, 2302
TscAI CASTG 7 cut(s) 879, 1165, 1186, 1560, 2384, 2657, 2699
TseFI GTSAC 3 cut(s) 1893, 2141, 2485
TseI GCWGC 9 cut(s) 438, 821, 824, 1081, 1145, 1748, 2433, 2495, 2621
Tsp45I GTSAC 3 cut(s) 1893, 2141, 2485
TspGWI ACGGA 2 cut(s) 289, 1967
TspRI CASTG 7 cut(s) 879, 1165, 1186, 1560, 2384, 2657, 2699
Van91I CCANNNNNTGG 1 cut(s) 934
Vha464I CTTAAG 1 cut(s) 398
VspI ATTAAT 2 cut(s) 353, 668
XapI RAATTY 5 cut(s) 213, 1110, 1163, 1184, 2156
XbaI TCTAGA 1 cut(s) 1340
XceI RCATGY 3 cut(s) 1052, 1138, 1623
XcmI CCANNNNNNNNNTGG 2 cut(s) 587, 854
XhoI CTCGAG 1 cut(s) 1088
XmiI GTMKAC 1 cut(s) 189
XmnI GAANNNNTTC 2 cut(s) 1032, 2514
XspI CTAG 5 cut(s) 21, 717, 1218, 1341, 1847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.