Rroxscaffold_2G00096730

General transcription factor 3C polypeptide

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
18069907 .. 18077752
7846 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00096730.1

Sequence Viewer

Length: 3237 bp
ATGGCAGCCAAACACCCTCCACCAAACCTCCGTCGGACTGCCGTAGTTCCTTCGATCCCCGACCTAGCGACGATTTTCAACCGTCAGATGACTCAGATCCACCACAAGTGCCAAATTCCAAATTTTACTTCACTCATCCGTGAGAAACGAAGTCGTCCGGCGCGTTTGGTCGAGGAATCAGTTACTATCCAAACAACTCAAGACTATTCGTATCGGTTGGCTTTCCAGTGCTTGCCTGGGACGAGGAGAGCTGCACAGATGGGAGTCCATGGTTATAGAGGTAGGAGAGCCAGAAAGTATGATGGAATCGATGCTCCCGTGAACCTGGATGCTATGCGACATTACTATAATGCAGTTTCAAGCTTCTGCCGGAAAGATTACTCAAAAGCAATGACATACTATGCTGAGGCCTTGAAAGGAGTCATTTGCCTGTACATCTTGATGGATAAAGAGGACAGTGCTGCTGGTGATAATGAAGAGGCTTCACAGTATGCTCTCGCTGTGGGCCTTGAGGATGACATGATGGAAGATGATAATGAAGAGGATGAAGAAGACAATGAGGATGATGAACAAGATGGGGAAGTAGAAGAGGATGACAATGAGGATGAAGAAGAGAGTACTCTCACTTTCAAAGATGGGGTTAATCCTTTGGATCTCGTGGAAGATGGTGCTTTTACTGACCAACTTTATCAGAAATTTGTGGGAATGGATTATGAGGCTCTAGCTGAGAAAAAGCGAAAAGCACTTGTTGATAACCGGCCTGGAGGTTCGGTAAAGAAGGTCAGGCAGGATGATCTTTCTGGAGCAAGCATGGAGGAAATTATGGAGGCCATGAATTATGGTATGCAAAGGAGATCAAGGAAGCGTAAGAAAAAAGGGAGGCGGAAAGGATCAAGAAACAAGCTTACCCCTGAAATTACTCGAATGCTTGGTGATGCTACTTATCATTATGCTCTTGGCAGTTATGAAGAGGCCATACCCATCTTGTCTGAAGTTATTATGAAAGCACCACATTTGCCTGATGCATATCACACGCTGGGACTTGTCCATCACGCTCTTGGTAATGAAATGAAAGCCTTGAATTTCTACACAATTGCTGCACATTTAGCACCAAGAGATTCATCTCTATGGGAACTGCTTTTTGACTGGTTCAATACACGAGGTAAAACTCCTAGAGCTATTTATTGCCTTTCAAGAGCAATAACAGCGGATCCTAAGAATATAAATCTGAAATATTGCCGTGCTTCTCTCTATGTTAAGGTTGGAGATTACCGAAGAGCTGCTACATCGTATGAACAAATAGTACAAACTTGTCCTGATGATGTTGAAGCACTCAAGACCGGGGCAAATATGTTCAAACTATGTGGTCAGCTTGAACGTTCTGTTCATATTCTGGGGGAATATCTCAAAGGTCATCCAACTGAGCCTGATTTGAGCGTCATTGATCTGTTAGCTTCCATGCTTATGCAAAATAATGCACACAGTGATGCTCTTCAGCATATTGAGCGTGCACGGTTAGTATCTTGTTCTCAAAAAGAGCTGCCCTTGGAAATGAAAGTTAAAGAAGGAATCTGCCATGCTTACCTTGGAAATATGGAGAAGGCAGAAATGCTCTTTAATGTTCTTGAACAGAAAAGTGCAGATCATGCTGAGTTAATTACTAAAGTTGCAGATTCATTCATGAGTCTTGAGCAGTATAGTTCTGCATTGAAGTATTATTTGATGCTGAAAGGAACCGCAGAATCTAATAATGGCTTTTTGCATATAAAAATGGCTCGATGCTATTTGTCCTTAAATGAAAGAGCACAAGCAATTTTGTGCTTCTACAAAGCTCTGAAGGCACTCGAAAACAATATTGATGCCCGATTGACATTGGCTTCTCTTCTTCTTGAAGAAGCCAGAGAAGAGGATGCCATTTCGCTGCTATCTCCTCCCAACAATCTTGATTGTTCTGACCTCCAAACTGATAAATCAGAACCTTGGTGGTGCAATGGAAAGCAAAAGGTGAAAGTGAAAAAGAGGCTCACAAAAAGTGTGCTGCTAGAAAGAGTTAAAGTTCTGAATAACCACCAAACGGATAACCTACTTTGTGGATCTATATCAGTAACTCCGGCATCAGATATGAGCAGAGCTAACAGAGCGAAGAAGCTGCTCGAGAAGAAGGCAAAAGTTAAGGAAGAAAAGAGAGCAAAGGCAATGGCTGCTGGAGCTGACTGGCAAAGTGATGATTCAGATGAAGATCCTCCAGAGGAAATACATAAAGAATCTCCCCTCCCTGATCTTCTCAAGGATAAAGAGAATTATGACCTCATAATAGATTTGTGCAAATCACTGGCTTCCTTGCATAGATATTGCGAAGCATTGGAGATTATAAATCTTGCTTTGAAGGTGACTCGCAACATATCTTCTGTTGCTGAGGAACTCCGGTCTCTTGGAGCGCAAATAGCATACAACACTCCCGATCCTGAGCATGGGCTTGACTGTGTAAAATACATTGCAGACCAGCATCCATACAGCTATGCTGCCTGGAATTGCTATTACAAAGTCATTACCAGATTTGATGACTGGTATGCAAGGCATTTTAAGTTTCTACGTGGTAAGCGGGACAAACTCAAAGACTGTGCAGCTCCCATGATCATTTCAGGGCATCACTTGACAAGAAAAAGCCGTCATCAAGATGCTGCCAGAGAATACCTTGAAGCTTATAAGTTGTTGCCCGAGAATGCCTTGATTAATCTATGTGTTGGTACCGCCTTAATCAACTTAGCACTTGGACTCAGACTTCAGAACAGGCACCAGTCTGTTGCACAGGGTTTAGCATTCCTCTACAACAACCTGCGTCTTTGTGAAAACAGCCAGGAGGCTTTGTACAACCTAGCCAGGGCCTTCCACCACATTGGCCTTGTGACTCTGGCAGCTGTGTATTATCAACATGTTCTAGCAATTCATCAGAAGGATTCCCCTCTCCCTAAACTTCCTCATGAGAACCCCGAATCTGCTGAGAATCTATTACCGGGTTACTGTGACCTTCGGAGAGAAGCAGCTTTCAATTTGCATCTTATCTACAAAAAGAGTGGAGCAGTGGATCTTGCTCGAATGACTGAAGAATCTGCTGGTTTGTTGCAGAAGATAATGATCCTCTTCTCAGATAGTGCAACTGTATTGAATGAGAGGTGGCTTCCCGCTCCATTCTCTGGTTGGCTTGAAAATACTGATTACCATTCCATGAGAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1078

Amino Acids

122.35

Weight (kDa)

6.24

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2372, 2706
Acc36I ACCTGC 1 cut(s) 2844
Acc65I GGTACC 1 cut(s) 2747
AccB1I GGYRCC 2 cut(s) 2747, 2793
AccB7I CCANNNNNTGG 1 cut(s) 3194
AccBSI CCGCTC 1 cut(s) 3185
AccII CGCG 1 cut(s) 163
AciI CCGC 6 cut(s) 883, 1208, 1737, 2602, 2751, 3183
AclI AACGTT 1 cut(s) 1378
AcsI RAATTY 4 cut(s) 114, 121, 695, 1081
AcuI CTGAAG 5 cut(s) 1011, 1478, 1856, 2768, 3123
AdeI CACNNNGTG 1 cut(s) 1484
AfaI GTAC 5 cut(s) 434, 619, 1305, 2749, 2870
AfiI CCNNNNNNNGG 4 cut(s) 2074, 2471, 2881, 3194
AflIII ACRYGT 1 cut(s) 2932
AjnI CCWGG 6 cut(s) 235, 324, 760, 2525, 2856, 2879
AjuI GAANNNNNNNTTGG 2 cut(s) 112, 144
Alw21I GWGCWC 2 cut(s) 1513, 1807
Alw26I GTCTC 1 cut(s) 2433
Alw44I GTGCAC 1 cut(s) 1509
Ama87I CYCGRG 2 cut(s) 2153, 2717
AoxI GGCC 7 cut(s) 408, 505, 758, 828, 972, 2883, 2899
ApaLI GTGCAC 1 cut(s) 1509
ApoI RAATTY 4 cut(s) 114, 121, 695, 1081
AseI ATTAAT 1 cut(s) 2733
Asp718I GGTACC 1 cut(s) 2747
AspLEI GCGC 2 cut(s) 163, 2440
AspS9I GGNCC 2 cut(s) 505, 2883
AsuC2I CCSGG 2 cut(s) 1342, 3015
AsuHPI GGTGA 4 cut(s) 479, 944, 2017, 2401
AvaI CYCGRG 2 cut(s) 2153, 2717
BaeGI GKGCMC 1 cut(s) 1513
BamHI GGATCC 1 cut(s) 1210
BanI GGYRCC 2 cut(s) 2747, 2793
BarI GAAGNNNNNNTAC 4 cut(s) 960, 992, 1267, 1299
BauI CACGAG 2 cut(s) 656, 1158
BbsI GAAGAC 1 cut(s) 558
Bbv12I GWGCWC 2 cut(s) 1513, 1807
BbvCI CCTCAGC 2 cut(s) 405, 2415
BccI CCATC 9 cut(s) 253, 296, 436, 517, 569, 629, 659, 989, 1056
BceAI ACGGC 3 cut(s) 26, 1224, 2652
BcgI CGANNNNNNTGC 2 cut(s) 2131, 2165
BciT130I CCWGG 6 cut(s) 237, 326, 762, 2527, 2858, 2881
BclI TGATCA 1 cut(s) 2634
BcnI CCSGG 2 cut(s) 1342, 3015
BcoDI GTCTC 1 cut(s) 2433
BfaI CTAG 6 cut(s) 65, 722, 1173, 2042, 2876, 2939
BfuAI ACCTGC 1 cut(s) 2844
BmcAI AGTACT 1 cut(s) 619
Bme1390I CCNGG 8 cut(s) 237, 326, 762, 1342, 2527, 2858, 2881, 3015
BmeT110I CYCGRG 2 cut(s) 2153, 2717
BmgT120I GGNCC 2 cut(s) 505, 2883
BmiI GGNNCC 4 cut(s) 1212, 1735, 2749, 2795
BmrFI CCNGG 8 cut(s) 237, 326, 762, 1342, 2527, 2858, 2881, 3015
BpiI GAAGAC 1 cut(s) 558
BpmI CTGGAG 4 cut(s) 783, 822, 2226, 2229
Bpu10I CCTNAGC 3 cut(s) 405, 2415, 2466
BpuEI CTTGAG 5 cut(s) 183, 530, 1319, 1709, 2270
BpuMI CCSGG 2 cut(s) 1342, 3015
Bsa29I ATCGAT 1 cut(s) 309
BsaAI YACGTR 1 cut(s) 2594
BsaBI GATNNNNATC 4 cut(s) 1026, 2098, 2238, 3134
BsaI GGTCTC 1 cut(s) 2433
BsaJI CCNNGG 7 cut(s) 236, 268, 1341, 1545, 1585, 1979, 2880
BsaWI WCCGGW 1 cut(s) 2424
BsaXI ACNNNNNCTCC 6 cut(s) 12, 42, 756, 786, 2852, 2882
Bsc4I CCNNNNNNNGG 4 cut(s) 2074, 2471, 2881, 3194
Bse118I RCCGGY 1 cut(s) 756
Bse1I ACTGG 6 cut(s) 226, 1151, 2219, 2337, 2570, 2797
Bse3DI GCAATG 4 cut(s) 396, 1996, 2202, 2493
Bse8I GATNNNNATC 4 cut(s) 1026, 2098, 2238, 3134
BseBI CCWGG 6 cut(s) 237, 326, 762, 2527, 2858, 2881
BseCI ATCGAT 1 cut(s) 309
BseDI CCNNGG 7 cut(s) 236, 268, 1341, 1545, 1585, 1979, 2880
BseJI GATNNNNATC 4 cut(s) 1026, 2098, 2238, 3134
BseLI CCNNNNNNNGG 4 cut(s) 2074, 2471, 2881, 3194
BseMI GCAATG 4 cut(s) 396, 1996, 2202, 2493
BseNI ACTGG 6 cut(s) 226, 1151, 2219, 2337, 2570, 2797
BseRI GAGGAG 2 cut(s) 259, 1920
BseSI GKGCMC 1 cut(s) 1513
BseYI CCCAGC 1 cut(s) 1036
BsgI GTGCAG 4 cut(s) 237, 1083, 1659, 2643
Bsh1236I CGCG 1 cut(s) 163
BshFI GGCC 7 cut(s) 410, 507, 760, 830, 974, 2885, 2901
BshNI GGYRCC 2 cut(s) 2747, 2793
BshVI ATCGAT 1 cut(s) 309
BsiHKAI GWGCWC 2 cut(s) 1513, 1807
BsiHKCI CYCGRG 2 cut(s) 2153, 2717
BsiSI CCGG 7 cut(s) 158, 370, 757, 1341, 2111, 2425, 3014
BslFI GGGAC 3 cut(s) 253, 1053, 2618
BslI CCNNNNNNNGG 4 cut(s) 2074, 2471, 2881, 3194
BsmAI GTCTC 1 cut(s) 2433
BsmFI GGGAC 3 cut(s) 253, 1053, 2618
BsmI GAATGC 3 cut(s) 930, 2728, 2819
BsnI GGCC 7 cut(s) 410, 507, 760, 830, 974, 2885, 2901
Bso31I GGTCTC 1 cut(s) 2433
BsoBI CYCGRG 2 cut(s) 2153, 2717
Bsp1286I GDGCHC 2 cut(s) 1513, 1807
Bsp1407I TGTACA 2 cut(s) 432, 2868
Bsp19I CCATGG 1 cut(s) 268
BspACI CCGC 6 cut(s) 883, 1208, 1737, 2602, 2751, 3183
BspANI GGCC 7 cut(s) 410, 507, 760, 830, 974, 2885, 2901
BspDI ATCGAT 1 cut(s) 309
BspFNI CGCG 1 cut(s) 163
BspHI TCATGA 2 cut(s) 1680, 2980
BspLI GGNNCC 4 cut(s) 1212, 1735, 2749, 2795
BspMI ACCTGC 1 cut(s) 2844
BspQI GCTCTTC 2 cut(s) 1270, 1497
BspT107I GGYRCC 2 cut(s) 2747, 2793
BspTNI GGTCTC 1 cut(s) 2433
BsrBI CCGCTC 1 cut(s) 3185
BsrDI GCAATG 4 cut(s) 396, 1996, 2202, 2493
BsrFI RCCGGY 1 cut(s) 756
BsrGI TGTACA 2 cut(s) 432, 2868
BsrI ACTGG 6 cut(s) 226, 1151, 2219, 2337, 2570, 2797
BssAI RCCGGY 1 cut(s) 756
BssECI CCNNGG 7 cut(s) 236, 268, 1341, 1545, 1585, 1979, 2880
BssSI CACGAG 2 cut(s) 656, 1158
BssT1I CCWWGG 4 cut(s) 268, 1545, 1585, 1979
Bst2BI CACGAG 2 cut(s) 656, 1158
Bst2UI CCWGG 6 cut(s) 237, 326, 762, 2527, 2858, 2881
Bst4CI ACNGT 9 cut(s) 83, 458, 489, 1484, 1515, 2483, 2621, 3023, 3160
BstAPI GCANNNNNTGC 2 cut(s) 1646, 2201
BstAUI TGTACA 2 cut(s) 432, 2868
BstBAI YACGTR 1 cut(s) 2594
BstC8I GCNNGC 3 cut(s) 233, 808, 1509
BstDSI CCRYGG 1 cut(s) 268
BstFNI CGCG 1 cut(s) 163
BstHHI GCGC 2 cut(s) 163, 2440
BstMAI GTCTC 1 cut(s) 2433
BstMWI GCNNNNNNNGC 9 cut(s) 1106, 1205, 1504, 1646, 1838, 2138, 2201, 2207, 2444
BstNI CCWGG 6 cut(s) 237, 326, 762, 2527, 2858, 2881
BstNSI RCATGY 1 cut(s) 2936
BstSCI CCNGG 8 cut(s) 235, 324, 760, 1340, 2525, 2856, 2879, 3013
BstSLI GKGCMC 1 cut(s) 1513
BstUI CGCG 1 cut(s) 163
BstV2I GAAGAC 1 cut(s) 558
BstX2I RGATCY 6 cut(s) 96, 652, 1210, 2093, 2239, 3085
BstXI CCANNNNNNTGG 1 cut(s) 2897
BstYI RGATCY 6 cut(s) 96, 652, 1210, 2093, 2239, 3085
Bsu15I ATCGAT 1 cut(s) 309
BsuRI GGCC 7 cut(s) 410, 507, 760, 830, 974, 2885, 2901
BsuTUI ATCGAT 1 cut(s) 309
BtgI CCRYGG 1 cut(s) 268
BtsI GCAGTG 1 cut(s) 3087
BtsIMutI CAGTG 5 cut(s) 233, 463, 1489, 2330, 3087
BveI ACCTGC 1 cut(s) 2844
Cac8I GCNNGC 3 cut(s) 233, 808, 1509
CciI TCATGA 2 cut(s) 1680, 2980
CfoI GCGC 2 cut(s) 163, 2440
Cfr10I RCCGGY 1 cut(s) 756
Cfr13I GGNCC 2 cut(s) 505, 2883
ClaI ATCGAT 1 cut(s) 309
CseI GACGC 2 cut(s) 1426, 2828
Csp6I GTAC 5 cut(s) 433, 618, 1304, 2748, 2869
CspCI CAANNNNNGTGG 4 cut(s) 1345, 1380, 3055, 3090
CviQI GTAC 5 cut(s) 433, 618, 1304, 2748, 2869
DraIII CACNNNGTG 1 cut(s) 1484
EciI GGCGGA 1 cut(s) 898
Eco130I CCWWGG 4 cut(s) 268, 1545, 1585, 1979
Eco147I AGGCCT 1 cut(s) 410
Eco31I GGTCTC 1 cut(s) 2433
Eco57I CTGAAG 5 cut(s) 1011, 1478, 1856, 2768, 3123
Eco88I CYCGRG 2 cut(s) 2153, 2717
EcoO109I RGGNCCY 1 cut(s) 2883
EcoRII CCWGG 6 cut(s) 235, 324, 760, 2525, 2856, 2879
EcoT14I CCWWGG 4 cut(s) 268, 1545, 1585, 1979
EcoT22I ATGCAT 1 cut(s) 1027
ErhI CCWWGG 4 cut(s) 268, 1545, 1585, 1979
FaqI GGGAC 3 cut(s) 253, 1053, 2618
FauI CCCGC 2 cut(s) 2595, 3190
FbaI TGATCA 1 cut(s) 2634
FspBI CTAG 6 cut(s) 65, 722, 1173, 2042, 2876, 2939
GlaI GCGC 2 cut(s) 162, 2439
GsaI CCCAGC 1 cut(s) 1040
GsuI CTGGAG 4 cut(s) 783, 822, 2226, 2229
HaeIII GGCC 7 cut(s) 410, 507, 760, 830, 974, 2885, 2901
HapII CCGG 7 cut(s) 158, 370, 757, 1341, 2111, 2425, 3014
HgaI GACGC 2 cut(s) 1426, 2828
HhaI GCGC 2 cut(s) 163, 2440
Hin6I GCGC 2 cut(s) 161, 2438
HinP1I GCGC 2 cut(s) 161, 2438
HindIII AAGCTT 3 cut(s) 361, 902, 2700
HpaII CCGG 7 cut(s) 158, 370, 757, 1341, 2111, 2425, 3014
HphI GGTGA 4 cut(s) 479, 944, 2017, 2401
Hpy166II GTNNAC 2 cut(s) 322, 1511
Hpy8I GTNNAC 2 cut(s) 322, 1511
Hpy99I CGWCG 2 cut(s) 36, 73
HpyCH4III ACNGT 9 cut(s) 83, 458, 489, 1484, 1515, 2483, 2621, 3023, 3160
HpyCH4IV ACGT 2 cut(s) 1378, 2593
HpyF10VI GCNNNNNNNGC 9 cut(s) 1106, 1205, 1504, 1646, 1838, 2138, 2201, 2207, 2444
HpySE526I ACGT 2 cut(s) 1378, 2593
HspAI GCGC 2 cut(s) 161, 2438
KpnI GGTACC 1 cut(s) 2751
Ksp22I TGATCA 1 cut(s) 2634
LguI GCTCTTC 2 cut(s) 1270, 1497
LmnI GCTCC 7 cut(s) 319, 803, 2207, 2435, 2632, 3077, 3190
MaeI CTAG 6 cut(s) 65, 722, 1173, 2042, 2876, 2939
MaeII ACGT 2 cut(s) 1378, 2593
MaeIII GTNAC 6 cut(s) 181, 2104, 2389, 2905, 3017, 3023
MbiI CCGCTC 1 cut(s) 3185
MfeI CAATTG 1 cut(s) 1092
MflI RGATCY 6 cut(s) 96, 652, 1210, 2093, 2239, 3085
MhlI GDGCHC 2 cut(s) 1513, 1807
MlyI GAGTC 7 cut(s) 85, 273, 429, 1693, 2386, 2769, 2902
MmeI TCCRAC 3 cut(s) 14, 1243, 1442
Mph1103I ATGCAT 1 cut(s) 1027
MslI CAYNNNNRTG 5 cut(s) 440, 1126, 1463, 1485, 2676
MspA1I CMGCKG 2 cut(s) 1208, 2918
MspI CCGG 7 cut(s) 158, 370, 757, 1341, 2111, 2425, 3014
MspR9I CCNGG 8 cut(s) 237, 326, 762, 1342, 2527, 2858, 2881, 3015
MunI CAATTG 1 cut(s) 1092
Mva1269I GAATGC 3 cut(s) 930, 2728, 2819
MvaI CCWGG 6 cut(s) 237, 326, 762, 2527, 2858, 2881
MvnI CGCG 1 cut(s) 163
MwoI GCNNNNNNNGC 9 cut(s) 1106, 1205, 1504, 1646, 1838, 2138, 2201, 2207, 2444
NciI CCSGG 2 cut(s) 1342, 3015
NcoI CCATGG 1 cut(s) 268
NlaIV GGNNCC 4 cut(s) 1212, 1735, 2749, 2795
NmuCI GTSAC 3 cut(s) 2389, 2905, 3023
NsiI ATGCAT 1 cut(s) 1027
NspI RCATGY 1 cut(s) 2936
PaeR7I CTCGAG 1 cut(s) 2153
PagI TCATGA 2 cut(s) 1680, 2980
PceI AGGCCT 1 cut(s) 410
PciI ACATGT 1 cut(s) 2932
PciSI GCTCTTC 2 cut(s) 1270, 1497
PcsI WCGNNNNNNNCGW 2 cut(s) 160, 315
PctI GAATGC 3 cut(s) 930, 2728, 2819
PflMI CCANNNNNTGG 1 cut(s) 3194
PleI GAGTC 7 cut(s) 85, 272, 428, 1692, 2386, 2769, 2902
PpsI GAGTC 7 cut(s) 85, 272, 428, 1692, 2386, 2769, 2902
Ppu21I YACGTR 1 cut(s) 2594
PscI ACATGT 1 cut(s) 2932
PshBI ATTAAT 1 cut(s) 2733
PsiI TTATAA 2 cut(s) 2372, 2706
Psp1406I AACGTT 1 cut(s) 1378
Psp6I CCWGG 6 cut(s) 235, 324, 760, 2525, 2856, 2879
PspFI CCCAGC 1 cut(s) 1036
PspGI CCWGG 6 cut(s) 235, 324, 760, 2525, 2856, 2879
PspN4I GGNNCC 4 cut(s) 1212, 1735, 2749, 2795
PspPI GGNCC 2 cut(s) 505, 2883
PsrI GAACNNNNNNTAC 2 cut(s) 1287, 1319
PsuI RGATCY 6 cut(s) 96, 652, 1210, 2093, 2239, 3085
PvuII CAGCTG 1 cut(s) 2918
RsaI GTAC 5 cut(s) 434, 619, 1305, 2749, 2870
RsaNI GTAC 5 cut(s) 433, 618, 1304, 2748, 2869
RseI CAYNNNNRTG 5 cut(s) 440, 1126, 1463, 1485, 2676
SapI GCTCTTC 2 cut(s) 1270, 1497
Sau96I GGNCC 2 cut(s) 505, 2883
ScaI AGTACT 1 cut(s) 619
SchI GAGTC 7 cut(s) 85, 273, 429, 1693, 2386, 2769, 2902
ScrFI CCNGG 8 cut(s) 237, 326, 762, 1342, 2527, 2858, 2881, 3015
SduI GDGCHC 2 cut(s) 1513, 1807
Sfr274I CTCGAG 1 cut(s) 2153
SlaI CTCGAG 1 cut(s) 2153
SmiMI CAYNNNNRTG 5 cut(s) 440, 1126, 1463, 1485, 2676
SmlI CTYRAG 6 cut(s) 198, 509, 1334, 1688, 2153, 2285
SmoI CTYRAG 6 cut(s) 198, 509, 1334, 1688, 2153, 2285
SseBI AGGCCT 1 cut(s) 410
SsiI CCGC 6 cut(s) 883, 1208, 1737, 2602, 2751, 3183
SspI AATATT 2 cut(s) 1235, 1855
SspMI CTAG 6 cut(s) 65, 722, 1173, 2042, 2876, 2939
StuI AGGCCT 1 cut(s) 410
StyD4I CCNGG 8 cut(s) 235, 324, 760, 1340, 2525, 2856, 2879, 3013
StyI CCWWGG 4 cut(s) 268, 1545, 1585, 1979
TaaI ACNGT 9 cut(s) 83, 458, 489, 1484, 1515, 2483, 2621, 3023, 3160
TaiI ACGT 2 cut(s) 1381, 2596
TaqI TCGA 8 cut(s) 53, 171, 309, 922, 1777, 1845, 2154, 3094
TatI WGTACW 4 cut(s) 432, 617, 1303, 2868
TscAI CASTG 5 cut(s) 233, 463, 1489, 2337, 3087
TseFI GTSAC 3 cut(s) 2389, 2905, 3023
Tsp45I GTSAC 3 cut(s) 2389, 2905, 3023
TspGWI ACGGA 3 cut(s) 20, 128, 2090
TspRI CASTG 5 cut(s) 233, 463, 1489, 2337, 3087
Van91I CCANNNNNTGG 1 cut(s) 3194
VneI GTGCAC 1 cut(s) 1509
VspI ATTAAT 1 cut(s) 2733
XapI RAATTY 4 cut(s) 114, 121, 695, 1081
XceI RCATGY 1 cut(s) 2936
XcmI CCANNNNNNNNNTGG 4 cut(s) 233, 1055, 1583, 3195
XhoI CTCGAG 1 cut(s) 2153
XspI CTAG 6 cut(s) 65, 722, 1173, 2042, 2876, 2939
ZrmI AGTACT 1 cut(s) 619
Zsp2I ATGCAT 1 cut(s) 1027
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.